BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045379
(352 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/359 (75%), Positives = 303/359 (84%), Gaps = 24/359 (6%)
Query: 1 CRASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFP 60
C+A +S+G +V+KY RD F+DK GK +SFNHKKLSRKRCGSLRG+GWKYGSGFVDGIFP
Sbjct: 17 CKAKSSSGGTVEKYKRDALFLDKRGKWQSFNHKKLSRKRCGSLRGQGWKYGSGFVDGIFP 76
Query: 61 VLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLM-- 118
VLSP AQQIL F+Q+EVD +T+W A D+LP TH TWDDLINV VQLRLNKKWD I+L+
Sbjct: 77 VLSPIAQQILSFIQKEVDPSTVWAALDTLPATHETWDDLINVVVQLRLNKKWDLILLICQ 136
Query: 119 ---------SCVSI--LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
S V I L+I+AYG+KSL+K AE TY EL+++RCIPTEDTYALLLKAYC S
Sbjct: 137 WILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTS 196
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
GLLEKAEA+F EMRKYGLPPSA+VYN+YIDGL+K GNPQ+AVEIFQRMKRDCCQPSTETY
Sbjct: 197 GLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETY 256
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
TL+INL+GKAS+S+MALKLFNEMRS KCKPNICTYTALVNAFAREGLCE+AEEIFEQLQ
Sbjct: 257 TLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 316
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G EPDVYAYNALMEAY + S M HMGCEPDRASYNIMVDAYGR GLHE
Sbjct: 317 DGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHE 375
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 116/223 (52%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI +G+ S A + E+ +C P TY L+ A+ GL EKAE +F ++++
Sbjct: 258 LLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 317
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ + G P A EIF M+ C+P +Y +M++ YG+ A
Sbjct: 318 GHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDA 377
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F EM+ P + ++ L++A+++ G + E+I +L +G+EPD + N+++
Sbjct: 378 QAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNL 437
Query: 304 Y----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
Y +++ M G D ++YNI+++ YGRAG E
Sbjct: 438 YGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFE 480
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 103/194 (53%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ +TY LL+ + + A +F EMR P+ Y + ++ + G +KA
Sbjct: 249 CQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAE 308
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EIF++++ D +P Y ++ Y +A + A ++F+ M+ C+P+ +Y +V+A+
Sbjct: 309 EIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 368
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH-MGCEPDR 318
R GL E+A+ +FE+++ GI P + ++ L+ AY +++ +H G EPD
Sbjct: 369 GRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDT 428
Query: 319 ASYNIMVDAYGRAG 332
N M++ YGR G
Sbjct: 429 FVLNSMLNLYGRLG 442
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH+ A+ + E+ PT ++ LLL AY +G + K E + E+ +
Sbjct: 363 IMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHES 422
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V NS ++ + G K E+ M+ TY ++IN+YG+A
Sbjct: 423 GLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKM 482
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF + + KP++ T+T+ + A++R+ L + EIFE++ AG PD
Sbjct: 483 EGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPD 532
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A + + C P +Y +++ AY GL E A+AVF EM++ G
Sbjct: 329 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLG 388
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K G+ K +I + +P T M+NLYG+ +
Sbjct: 389 ITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKME 448
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ M S +I TY L+N + R G E+ E +F+ L ++PDV + + + AY
Sbjct: 449 EVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAY 508
Query: 305 ---RLISR--------MHMGCEPDRASYNIMVDA 327
+L ++ + GC PD + +++ +
Sbjct: 509 SRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSS 542
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/359 (74%), Positives = 295/359 (82%), Gaps = 26/359 (7%)
Query: 2 RASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPV 61
RA N+ G V+K RD FIDK GK RSFN KK SRK+ GSLRG+GWKYGSGFVDGIFPV
Sbjct: 38 RAENTNGGVVEKGKRDSLFIDKRGKFRSFNFKKQSRKKGGSLRGRGWKYGSGFVDGIFPV 97
Query: 62 LSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCV 121
+SP AQQIL FVQ+E SN IW + DSL P H TWDD+INV+VQLRLNK+WD IVL+ C
Sbjct: 98 MSPIAQQILDFVQKEERSNRIWGSLDSLSPNHTTWDDIINVAVQLRLNKQWDAIVLI-CG 156
Query: 122 SIL--------------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
IL LI+AYGQKSL+KKAE TYLELL++RC+PTEDTYALLLKAYC S
Sbjct: 157 WILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTS 216
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
GLLEKAEAVF EMRKYG PPSAVVYN+YIDGL+KGG+ QKAVEIF+RMKRD CQPST TY
Sbjct: 217 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 276
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T++INLYGKASKS+MALK+F+EMRS KCKPNICT+TALVNAFAREGLCE+AEEIFEQLQ
Sbjct: 277 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 336
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
AG+EPDVYAYNALMEAY + S M HMGCEPDRASYNIMVDAYGRAGLHE
Sbjct: 337 AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 395
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ S A + E+ +C P T+ L+ A+ GL EKAE +F ++++
Sbjct: 278 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 337
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ ++ + G P A EIF M+ C+P +Y +M++ YG+A A
Sbjct: 338 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA 397
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F M+ P + ++ L++A++R G + EEI Q+ +GI+PD + N+++
Sbjct: 398 QAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNL 457
Query: 304 Y----------RLISRMHMGCEP-DRASYNIMVDAYGRAGL 333
Y +++ M G P D ++YNI+++ YGRAG
Sbjct: 458 YGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 498
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH+ A+ + + PT ++ LLL AY +G + K E + +M K
Sbjct: 383 IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 442
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V NS ++ + G +K E+ M++ TY ++IN+YG+A
Sbjct: 443 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 502
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF + + P++ T+T+ + A++R E+FE++ AG PD L+ A
Sbjct: 503 EELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 562
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A + + C P +Y +++ AY +GL E A+AVF M++ G
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 408
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + G K EI +M + +P T M+NLYG+ +
Sbjct: 409 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKME 468
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ M +I TY L+N + R G EE+F L + PDV + + + AY
Sbjct: 469 EVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAY 528
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDA 327
+ GC PD + +++ A
Sbjct: 529 SRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 562
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/359 (74%), Positives = 295/359 (82%), Gaps = 26/359 (7%)
Query: 2 RASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPV 61
RA N+ G V+K RD FIDK GK RSFN KK SRK+ GSLRG+GWKYGSGFVDGIFPV
Sbjct: 76 RAENTNGGVVEKGKRDSLFIDKRGKFRSFNFKKQSRKKGGSLRGRGWKYGSGFVDGIFPV 135
Query: 62 LSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCV 121
+SP AQQIL FVQ+E SN IW + DSL P H TWDD+INV+VQLRLNK+WD IVL+ C
Sbjct: 136 MSPIAQQILDFVQKEERSNRIWGSLDSLSPNHTTWDDIINVAVQLRLNKQWDAIVLI-CG 194
Query: 122 SIL--------------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
IL LI+AYGQKSL+KKAE TYLELL++RC+PTEDTYALLLKAYC S
Sbjct: 195 WILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTS 254
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
GLLEKAEAVF EMRKYG PPSAVVYN+YIDGL+KGG+ QKAVEIF+RMKRD CQPST TY
Sbjct: 255 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 314
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T++INLYGKASKS+MALK+F+EMRS KCKPNICT+TALVNAFAREGLCE+AEEIFEQLQ
Sbjct: 315 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 374
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
AG+EPDVYAYNALMEAY + S M HMGCEPDRASYNIMVDAYGRAGLHE
Sbjct: 375 AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 433
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ S A + E+ +C P T+ L+ A+ GL EKAE +F ++++
Sbjct: 316 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 375
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ ++ + G P A EIF M+ C+P +Y +M++ YG+A A
Sbjct: 376 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA 435
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F M+ P + ++ L++A++R G + EEI Q+ +GI+PD + N+++
Sbjct: 436 QAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNL 495
Query: 304 Y----------RLISRMHMGCEP-DRASYNIMVDAYGRAGL 333
Y +++ M G P D ++YNI+++ YGRAG
Sbjct: 496 YGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 536
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH+ A+ + + PT ++ LLL AY +G + K E + +M K
Sbjct: 421 IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 480
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V NS ++ + G +K E+ M++ TY ++IN+YG+A
Sbjct: 481 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 540
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF + + P++ T+T+ + A++R E+FE++ AG PD L+ A
Sbjct: 541 EELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 600
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A + + C P +Y +++ AY +GL E A+AVF M++ G
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 446
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + G K EI +M + +P T M+NLYG+ +
Sbjct: 447 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKME 506
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ M +I TY L+N + R G EE+F L + PDV + + + AY
Sbjct: 507 EVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAY 566
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDA 327
+ GC PD + +++ A
Sbjct: 567 SRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 600
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/359 (67%), Positives = 294/359 (81%), Gaps = 26/359 (7%)
Query: 2 RASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPV 61
+A++S V+++K+ RD +IDKNG+LR+FNHKK+SRK+CGSLRG+GWKYGSGFVDGIFPV
Sbjct: 25 KANDSNSVALEKFKRDSVYIDKNGRLRNFNHKKVSRKKCGSLRGRGWKYGSGFVDGIFPV 84
Query: 62 LSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCV 121
LSPTAQQIL +V++ V+S +IW + D LPPT WDD+ V+VQLR+ K+WD I+ + C
Sbjct: 85 LSPTAQQILDYVEKGVESESIWGSLDMLPPTLDAWDDIFTVAVQLRMRKQWDSIISI-CR 143
Query: 122 SILL--------------IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
ILL IEA+GQK L+K+AE TYL+LL++RCIPTEDTYALL+KAYC+S
Sbjct: 144 WILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCIS 203
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
GLLEKAEAVF EMR YGLP SAVVYN+YI+GL+KGGN KA EIF+RMK+D C+P+TETY
Sbjct: 204 GLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETY 263
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T++INLYGKA KSFMALKLF+EM SH CKPNICTYTALVNAFAREGLCE+AEE+FEQ+Q
Sbjct: 264 TMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQE 323
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
AG+EPDVYAYNALMEAY + S M HMGCEPDRASYNI+VDAYG+AG +
Sbjct: 324 AGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQD 382
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A + E++ C P TY L+ A+ GL EKAE VF +M++
Sbjct: 265 MLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 324
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ ++ + G P A EIF M+ C+P +Y ++++ YGKA A
Sbjct: 325 GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDA 384
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F +M+ P + ++ L++A+++ G + EEI Q+ +G++ D Y N+++
Sbjct: 385 EAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNL 444
Query: 304 Y----------RLISRMHMGC-EPDRASYNIMVDAYGRAGLHE 335
Y ++ M G D ++YNI+++ YG+AG E
Sbjct: 445 YGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIE 487
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A + + C P +Y +L+ AY +G + AEAVF++M++ G
Sbjct: 336 LMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVG 395
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K G+ K EI +M + + T M+NLYG+ +
Sbjct: 396 ITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKME 455
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ M +I TY L+N + + G E E++F+ L G++PDV + + + AY
Sbjct: 456 EVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAY 515
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDA 327
+ GC PD + +++ A
Sbjct: 516 SKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAA 549
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ AE + ++ PT ++ +LL AY G + K E + +M K
Sbjct: 370 ILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKS 429
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL V NS ++ + G K E+ + M++ TY ++IN YG+A
Sbjct: 430 GLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERM 489
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF + S KP++ T+T+ + A++++ L + EIFE++ G PD L+ A
Sbjct: 490 EDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAA 549
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/349 (69%), Positives = 283/349 (81%), Gaps = 24/349 (6%)
Query: 11 VKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQIL 70
V+K RDG ++DK GK R+FN K+LSRKRCGSLRG+GWKYGSGFVDGIFPVL P AQQI+
Sbjct: 34 VEKSRRDGLYVDKRGKFRTFNRKRLSRKRCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIM 93
Query: 71 RFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMS----------- 119
FV+ EVD +WD+ D+LP T++TWDD+I+V+VQLRLNKKW PI+L+
Sbjct: 94 EFVREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWIMNKSTFRP 153
Query: 120 --CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
V LL++AYGQ+SL+K E TYLELL+S CIPTEDTYALLLKAYC SGLLEKAEAVF
Sbjct: 154 DVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVF 213
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EMRKYGL PSA+VYN+YIDGL+KGGN KAVEIF RMKRD CQP+T+TYT++IN+YGK
Sbjct: 214 AEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKE 273
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
SKS MA +F+EMR+ +CKPNICT+TALVNA AREGLCE+AEEIFEQ+Q AG EPDVYAY
Sbjct: 274 SKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAY 333
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
NALME+Y + S M HMGCEPDRASYNIMVDAYGRAGLHE
Sbjct: 334 NALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 382
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG++S A+ + E+ RC P T+ L+ A GL EKAE +F +M++
Sbjct: 265 MLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEA 324
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ + G P A EIF M+ C+P +Y +M++ YG+A A
Sbjct: 325 GYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA 384
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F EM+ P + ++ L++A++ G + E+I Q+ +G++PD + N+++
Sbjct: 385 QAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNL 444
Query: 304 Y----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
Y L S M G C D ++YNI+++ YGRAG E
Sbjct: 445 YGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVE 487
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E+Y + A + + C P +Y +++ AY +GL E A+AVF EM++ G
Sbjct: 336 LMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIG 395
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + GN K +I +M + +P T M+NLYG+ +
Sbjct: 396 ITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKME 455
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF+ M+ C+ +I TY L+N + R G E EE+F+ L +EPDV + + + AY
Sbjct: 456 DLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAY 515
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDA 327
L +M GC PD + +++ A
Sbjct: 516 SRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSA 549
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 98/180 (54%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH+ A+ + E+ PT ++ LLL AY +G + K E + +M K
Sbjct: 370 IMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKS 429
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V NS ++ + G K ++F M++ C+ TY ++IN+YG+A
Sbjct: 430 GLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERM 489
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF + + +P++ T+T+ + A++R+ L + E+FE++ AG PD L+ A
Sbjct: 490 EELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSA 549
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/357 (66%), Positives = 292/357 (81%), Gaps = 26/357 (7%)
Query: 2 RASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPV 61
++++++GV+++K+ RD +IDK GKLR+FNHKKLSRK+CGSLRG+GWK+GSGFVDGIFPV
Sbjct: 32 KSNDASGVALEKFKRDSVYIDKAGKLRNFNHKKLSRKKCGSLRGRGWKFGSGFVDGIFPV 91
Query: 62 LSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCV 121
LSPTA++I+ ++Q+ VD+ +IW + D L + WDD++ VSVQLR+ K+WD I+ + C
Sbjct: 92 LSPTAKKIMDYLQKGVDTESIWGSLDMLQASLEIWDDILTVSVQLRMRKQWDSIISI-CR 150
Query: 122 SILL--------------IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
ILL I+A+GQK L+K+AE TYL+LL++RCIP EDTYALL+KAYC+S
Sbjct: 151 WILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLS 210
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
GLLEKAEAVF EM+ YGLP SAVVYNSYI+GL+KGGNP KA EIF RMKRD C+PSTETY
Sbjct: 211 GLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETY 270
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T++INLYGK KSFMALK+FNEM SHKCKPNICTYTALVNAFAREGLCE+AEE+FEQ+Q
Sbjct: 271 TMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQE 330
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
AG+EPDVY+YNALMEAY + S M HMGCEPDRASYNI+VDAYGRAG
Sbjct: 331 AGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGF 387
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A + E+L +C P TY L+ A+ GL EKAE VF +M++
Sbjct: 272 MLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 331
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ ++ + G P A EIF M+ C+P +Y ++++ YG+A A
Sbjct: 332 GLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDA 391
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F +M+ P + ++ L++AF++ G + E+I Q+ +G++ D + N+++
Sbjct: 392 EAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNL 451
Query: 304 Y----------RLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
Y +++ M G CE D ++YNI+++ YG+AG
Sbjct: 452 YGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 492
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A + + C P +Y +L+ AY +G L AEAVF +M++ G
Sbjct: 343 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG 402
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K GN K +I +M + + T M+NLYG+ +
Sbjct: 403 ITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKME 462
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
++ M + C+ +I TY L+N + + G ++ E +F
Sbjct: 463 EVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLF 500
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/320 (75%), Positives = 269/320 (84%), Gaps = 26/320 (8%)
Query: 41 GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLI 100
GSLRG+GWKYGSGFVDGIFPV+SP AQQIL FVQ+E SN IW + DSL P H TWDD+I
Sbjct: 7 GSLRGRGWKYGSGFVDGIFPVMSPIAQQILDFVQKEERSNRIWGSLDSLSPNHTTWDDII 66
Query: 101 NVSVQLRLNKKWDPIVLMSCVSIL--------------LIEAYGQKSLHKKAEFTYLELL 146
NV+VQLRLNK+WD IVL+ C IL LI+AYGQKSL+KKAE TYLELL
Sbjct: 67 NVAVQLRLNKQWDAIVLI-CGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELL 125
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++RC+PTEDTYALLLKAYC SGLLEKAEAVF EMRKYG PPSAVVYN+YIDGL+KGG+ Q
Sbjct: 126 EARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQ 185
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KAVEIF+RMKRD CQPST TYT++INLYGKASKS+MALK+F+EMRS KCKPNICT+TALV
Sbjct: 186 KAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALV 245
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCE 315
NAFAREGLCE+AEEIFEQLQ AG+EPDVYAYNALMEAY + S M HMGCE
Sbjct: 246 NAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCE 305
Query: 316 PDRASYNIMVDAYGRAGLHE 335
PDRASYNIMVDAYGRAGLHE
Sbjct: 306 PDRASYNIMVDAYGRAGLHE 325
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ S A + E+ +C P T+ L+ A+ GL EKAE +F ++++
Sbjct: 208 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 267
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ ++ + G P A EIF M+ C+P +Y +M++ YG+A A
Sbjct: 268 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA 327
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F M+ P + ++ L++A++R G + EEI Q+ +GI+PD + N+++
Sbjct: 328 QAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNL 387
Query: 304 Y----------RLISRMHMGCEP-DRASYNIMVDAYGRAGL 333
Y +++ M G P D ++YNI+++ YGRAG
Sbjct: 388 YGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 428
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH+ A+ + + PT ++ LLL AY +G + K E + +M K
Sbjct: 313 IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 372
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V NS ++ + G +K E+ M++ TY ++IN+YG+A
Sbjct: 373 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 432
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+LF + + P++ T+T+ + A++R E+FE++ AG PD
Sbjct: 433 EELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPD 482
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A + + C P +Y +++ AY +GL E A+AVF M++ G
Sbjct: 279 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 338
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + G K EI +M + +P T M+NLYG+ +
Sbjct: 339 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKME 398
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ M +I TY L+N + R G EE+F L + PDV + + + AY
Sbjct: 399 EVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAY 458
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE-DTYALLLKAYCMSGL 169
K D VL S +++ YG+ +K E L ++ P + TY +L+ Y +G
Sbjct: 375 KPDTFVLNSMLNL-----YGRLGQFEKME-EVLTAMEKGPYPADISTYNILINIYGRAGF 428
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+ E +FR + L P V + S I + + +E+F+ M C P T
Sbjct: 429 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGT 485
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/361 (64%), Positives = 283/361 (78%), Gaps = 30/361 (8%)
Query: 3 ASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVL 62
+N G +VK Y ++GF ID+ GKL+ FN KKLSRKRCGSLRG+GWKYGSGFVDGIFPVL
Sbjct: 26 VTNLNGATVKSYKQEGFVIDERGKLKRFNRKKLSRKRCGSLRGRGWKYGSGFVDGIFPVL 85
Query: 63 SPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVS 122
SP AQ+IL F+Q+E D + + D +LP THA+WDDLINVSVQLRLNKKWD I+L+ C
Sbjct: 86 SPIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILV-CEW 144
Query: 123 IL--------------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
IL LI+AYGQK +K+AE Y++LL+SR +PTEDTYALL+KAYCM+G
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 169 LLEKAEAVFREMRKYGLPPSAV---VYNSYIDGLLK-GGNPQKAVEIFQRMKRDCCQPST 224
L+E+AE V EM+ + + P + VYN+YI+GL+K GN ++A+++FQRMKRD C+P+T
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
ETY LMINLYGKASKS+M+ KL+ EMRSH+CKPNICTYTALVNAFAREGLCE+AEEIFEQ
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 285 LQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
LQ G+EPDVY YNALME+Y + S M HMGCEPDRASYNIMVDAYGRAGL
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 334 H 334
H
Sbjct: 385 H 385
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 126/238 (52%), Gaps = 12/238 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ S + Y E+ +C P TY L+ A+ GL EKAE +F ++++
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P VYN+ ++ + G P A EIF M+ C+P +Y +M++ YG+A A
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F EM+ P + ++ L++A+++ + E I +++ G+EPD + N+++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 304 Y----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
Y ++++ M G C D ++YNI+++ YG+AG E + VEL K++
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE-RIEELFVELKEKNF 505
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH AE + E+ PT ++ LLL AY + + K EA+ +EM +
Sbjct: 374 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 433
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V NS ++ + G K +I M+ C TY ++IN+YGKA
Sbjct: 434 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 493
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF E++ +P++ T+T+ + A++R+ L + E+FE++ +G PD L+ A
Sbjct: 494 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E+Y + A + + C P +Y +++ AY +GL AEAVF EM++ G
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K + K I + M + +P T M+NLYG+ +
Sbjct: 400 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 459
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ EM + C +I TY L+N + + G E EE+F +L+ PDV + + + AY
Sbjct: 460 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 519
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDA 327
+ GC PD + +++ A
Sbjct: 520 SRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/361 (64%), Positives = 283/361 (78%), Gaps = 30/361 (8%)
Query: 3 ASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVL 62
+N G +VK Y ++GF ID+ GKL+ FN KKLSRKRCGSLRG+GWKYGSGFVDGIFPVL
Sbjct: 48 VTNLNGATVKSYKQEGFVIDERGKLKRFNRKKLSRKRCGSLRGRGWKYGSGFVDGIFPVL 107
Query: 63 SPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVS 122
SP AQ+IL F+Q+E D + + D +LP THA+WDDLINVSVQLRLNKKWD I+L+ C
Sbjct: 108 SPIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILV-CEW 166
Query: 123 IL--------------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
IL LI+AYGQK +K+AE Y++LL+SR +PTEDTYALL+KAYCM+G
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 169 LLEKAEAVFREMRKYGLPPSAV---VYNSYIDGLLK-GGNPQKAVEIFQRMKRDCCQPST 224
L+E+AE V EM+ + + P + VYN+YI+GL+K GN ++A+++FQRMKRD C+P+T
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
ETY LMINLYGKASKS+M+ KL+ EMRSH+CKPNICTYTALVNAFAREGLCE+AEEIFEQ
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 285 LQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
LQ G+EPDVY YNALME+Y + S M HMGCEPDRASYNIMVDAYGRAGL
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 334 H 334
H
Sbjct: 407 H 407
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 126/238 (52%), Gaps = 12/238 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ S + Y E+ +C P TY L+ A+ GL EKAE +F ++++
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P VYN+ ++ + G P A EIF M+ C+P +Y +M++ YG+A A
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F EM+ P + ++ L++A+++ + E I +++ G+EPD + N+++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 304 Y----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
Y ++++ M G C D ++YNI+++ YG+AG E + VEL K++
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE-RIEELFVELKEKNF 527
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH AE + E+ PT ++ LLL AY + + K EA+ +EM +
Sbjct: 396 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 455
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V NS ++ + G K +I M+ C TY ++IN+YGKA
Sbjct: 456 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 515
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF E++ +P++ T+T+ + A++R+ L + E+FE++ +G PD L+ A
Sbjct: 516 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E+Y + A + + C P +Y +++ AY +GL AEAVF EM++ G
Sbjct: 362 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 421
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K + K I + M + +P T M+NLYG+ +
Sbjct: 422 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 481
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ EM + C +I TY L+N + + G E EE+F +L+ PDV + + + AY
Sbjct: 482 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 541
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDA 327
+ GC PD + +++ A
Sbjct: 542 SRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/348 (65%), Positives = 274/348 (78%), Gaps = 21/348 (6%)
Query: 4 SNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLS 63
+N G + K Y ++GF ID+ GKL+ F+ KKLSRKRCGSLRG+GWKYGSGFVDGIFPVLS
Sbjct: 40 ANLNGGTFKSYKQEGFVIDERGKLKRFSSKKLSRKRCGSLRGRGWKYGSGFVDGIFPVLS 99
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSI 123
P AQ+IL F+Q+E D + + D +LP THA+WDDLINVSVQLRLNKKWD I+L+ C I
Sbjct: 100 PIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILV-CEWI 158
Query: 124 --------------LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
LLI+AYGQK K+AE Y++LL+SRC+PTEDTY LL+KAYCM+GL
Sbjct: 159 LRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTYTLLIKAYCMAGL 218
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK-GGNPQKAVEIFQRMKRDCCQPSTETYT 228
+EKAEAV EM+ + + PS VYN+YI+GL+K GN ++A+++FQRMKRD C+P+TETY
Sbjct: 219 IEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYN 278
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
LMINLYGKASKS+M+ KLF EMRSH+CKPNICTYTALVNAFAREGLCE+AEEIFEQLQ
Sbjct: 279 LMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 338
Query: 289 G-IEPDV-YAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
G I+ Y Y A E + L+ HMGCEPDRASYNIMVDAYGRAGLH
Sbjct: 339 GHIDSRAGYPYGA-AEIFSLMQ--HMGCEPDRASYNIMVDAYGRAGLH 383
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 24/238 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ S + + E+ +C P TY L+ A+ GL EKAE +F ++++
Sbjct: 279 LMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 338
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G +ID + G P A EIF M+ C+P +Y +M++ YG+A A
Sbjct: 339 G----------HIDS--RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 386
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F EM+ P + ++ L++A++R + E I +++ G+EPD + N+++
Sbjct: 387 EAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 446
Query: 304 Y----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
Y ++++ M G C D ++YNI+++ YG+AG E + VEL +++
Sbjct: 447 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE-RIEELFVELKERNF 503
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG+ LH AE + E+ PT ++ LLL AY + + K EA+ +EM +
Sbjct: 372 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSEN 431
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V NS ++ + G K +I M+ C TY ++IN+YGKA
Sbjct: 432 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 491
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF E++ KP++ T+T+ + A++R+ L + EIFE++ +G PD L+ A
Sbjct: 492 EELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSA 551
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 34/242 (14%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLEL-----LDSR------------------CIPTEDT 156
C L+ A+ ++ L +KAE + +L +DSR C P +
Sbjct: 310 CTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRAS 369
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ AY +GL AEAVF EM++ G+ P+ + + + + K I + M
Sbjct: 370 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMS 429
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +P T M+NLYG+ + K+ EM + C +I TY L+N + + G E
Sbjct: 430 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 489
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMV 325
EE+F +L+ +PDV + + + AY + GC PD + +++
Sbjct: 490 RIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLL 549
Query: 326 DA 327
A
Sbjct: 550 SA 551
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/349 (60%), Positives = 265/349 (75%), Gaps = 26/349 (7%)
Query: 12 KKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILR 71
K RDG +IDK+G R+F+ KK+SRKR G+++G+GWKYGSGFVDG+FPVLSP AQ IL
Sbjct: 45 KNRKRDGAYIDKDGVARTFDRKKISRKRGGAIKGRGWKYGSGFVDGVFPVLSPMAQDILE 104
Query: 72 FVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSIL------- 124
FVQ+ D IW++ D +P H WDD++NV+VQLRLN++W+PI+ + C IL
Sbjct: 105 FVQKGTDVTNIWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITV-CEWILYRSSFRP 163
Query: 125 -------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
LI+AYGQK KAE Y+ LL++ C+PTEDTYALLL+AYC SG L +AE V
Sbjct: 164 DIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVI 223
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM+K GLPP+A VYN+Y+DGLLK +KAVE++QRMK++ C+ +TETYTLMIN+YGKA
Sbjct: 224 SEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKA 283
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ +LK+FNEM++ CKPNICTYTALVNAFAREGLCE+AEE+FE++Q AG EPDVYAY
Sbjct: 284 KQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAY 343
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
NALMEAY + S M HMGCEPDRASYNI+VDAYGRAGLH+
Sbjct: 344 NALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQ 392
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 27/273 (9%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKK----WDPIVLMSCVS-----ILLIEAYGQKSLHKK 137
+ LPPT ++ ++ ++ R ++K + + C + L+I YG+
Sbjct: 229 NGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMS 288
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+ + E+ C P TY L+ A+ GL EKAE VF EM++ G P YN+ ++
Sbjct: 289 SLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALME 348
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G PQ A EIF M+ C+P +Y ++++ YG+A A F E++ +P
Sbjct: 349 AYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRP 408
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLI 307
+ ++ L++A A+ G EE+ QL +G+ PD +A NA++ AY RL+
Sbjct: 409 TMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLL 468
Query: 308 SRMH--------MGCEPDRASYNIMVDAYGRAG 332
M G PD ++YN++V+ YGRAG
Sbjct: 469 GAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAG 501
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ LH++AE + EL PT ++ LLL A+ SG + + E V ++ K
Sbjct: 380 ILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKS 439
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ-------PSTETYTLMINLYGK 236
GL P N+ ++ + G + M+R P T TY +++N+YG+
Sbjct: 440 GLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGR 499
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A F + + ++ T+T+ + A+AR+ EIFE++ AG PD
Sbjct: 500 AGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGT 559
Query: 297 YNALMEA 303
L+ A
Sbjct: 560 AKVLLAA 566
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + L + A + + C P +Y +L+ AY +GL ++AEA F+E+++ G
Sbjct: 346 LMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQG 405
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K GN + E+ ++ + +P T M+N YG+A +
Sbjct: 406 MRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDME 465
Query: 245 KLFNEMR-------SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+L M P+ TY LVN + R G + E F L G+ DV +
Sbjct: 466 RLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTW 525
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
+ + AY + M GC PD + +++ A
Sbjct: 526 TSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAA 566
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/349 (60%), Positives = 268/349 (76%), Gaps = 28/349 (8%)
Query: 12 KKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILR 71
+KYN G +IDK+G R+F+ KK+SRKR G++RG+GWKYGSGFVDG+FPVLSP AQ IL
Sbjct: 57 RKYN--GAYIDKDGVSRTFDRKKISRKRGGAMRGRGWKYGSGFVDGVFPVLSPMAQDILE 114
Query: 72 FVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSI-------- 123
FVQ+ D IW++ D++P TH +DDL+NV+VQ R+NKKWD I+ + C I
Sbjct: 115 FVQKGTDVAKIWESLDNIPSTHNLFDDLVNVAVQFRMNKKWDLIIPV-CEWILYRSSFRP 173
Query: 124 ------LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
LLIE+YG+K KAE Y+ LL+++C+PTEDTYALLL+AYC +G L +AE V
Sbjct: 174 DIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVI 233
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EMR++G+PP+A VYN+Y+DGLLK +KAVE++QRMKR+ C+ +TET+TLMIN+YGKA
Sbjct: 234 SEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKA 293
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ ++K+FNEM+S CKPNICTYTALVNAFAREGLCE+AEE+FE++Q AG EPDVYAY
Sbjct: 294 KQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAY 353
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
NALMEAY + S M HMGCEPDRASYNI+VDAYGRAGLHE
Sbjct: 354 NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHE 402
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 10/219 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ + + E+ C P TY L+ A+ GL EKAE VF EM++
Sbjct: 285 LMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA 344
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ + G PQ A EIF M+ C+P +Y ++++ YG+A A
Sbjct: 345 GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDA 404
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F E++ P + ++ L+ A AR G EE+ QL +G+ PD +A NA++ A
Sbjct: 405 EAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNA 464
Query: 304 Y----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y RL + M + D +YN+ V+AYGRAG
Sbjct: 465 YARAGRLDDMERLFAAMERRGDADVGTYNVAVNAYGRAG 503
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + L + A + + C P +Y +L+ AY +GL E AEAVF E+++ G
Sbjct: 356 LMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRG 415
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + GN + E+ ++ + P T M+N Y +A +
Sbjct: 416 MSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDME 475
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF M + ++ TY VNA+ R G E F + G+ DV + A M AY
Sbjct: 476 RLFAAM-ERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAY 534
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDA 327
++ M GC PD + +++ A
Sbjct: 535 ARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 568
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ LH+ AE + EL PT ++ LLL A+ SG + E V ++ K
Sbjct: 390 ILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS 449
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P N+ ++ + G +F M+R TY + +N YG+A
Sbjct: 450 GLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRM 508
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F + + ++ T+TA + A+AR + E++ AG PD L+ A
Sbjct: 509 EAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 568
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/349 (60%), Positives = 268/349 (76%), Gaps = 28/349 (8%)
Query: 12 KKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILR 71
+KYN G +IDK+G R+F+ KK+SRKR G++RG+GWKYGSGFVDG+FPVLSP AQ IL
Sbjct: 200 RKYN--GAYIDKDGVSRTFDRKKISRKRGGAMRGRGWKYGSGFVDGVFPVLSPMAQDILE 257
Query: 72 FVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSIL------- 124
FVQ+ D IW++ D++P TH +DDL+NV+VQ R+NKKWD I+ + C IL
Sbjct: 258 FVQKGTDVAKIWESLDNIPSTHNLFDDLVNVAVQFRMNKKWDLIIPV-CEWILYRSSFRP 316
Query: 125 -------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
LIE+YG+K KAE Y+ LL+++C+PTEDTYALLL+AYC +G L +AE V
Sbjct: 317 DIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVI 376
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EMR++G+PP+A VYN+Y+DGLLK +KAVE++QRMKR+ C+ +TET+TLMIN+YGKA
Sbjct: 377 SEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKA 436
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ ++K+FNEM+S CKPNICTYTALVNAFAREGLCE+AEE+FE++Q AG EPDVYAY
Sbjct: 437 KQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAY 496
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
NALMEAY + S M HMGCEPDRASYNI+VDAYGRAGLHE
Sbjct: 497 NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHE 545
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 10/219 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ + + E+ C P TY L+ A+ GL EKAE VF EM++
Sbjct: 428 LMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA 487
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ + G PQ A EIF M+ C+P +Y ++++ YG+A A
Sbjct: 488 GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDA 547
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F E++ P + ++ L+ A AR G EE+ QL +G+ PD +A NA++ A
Sbjct: 548 EAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNA 607
Query: 304 Y----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y RL++ M + D +YN+ V+AYGRAG
Sbjct: 608 YARAGRLDDMERLLAAMERRGDADVGTYNVAVNAYGRAG 646
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + L + A + + C P +Y +L+ AY +GL E AEAVF E+++ G
Sbjct: 499 LMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRG 558
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + GN + E+ ++ + P T M+N Y +A +
Sbjct: 559 MSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDME 618
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L M + ++ TY VNA+ R G E F + G+ DV + A M AY
Sbjct: 619 RLLAAM-ERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAY 677
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDA 327
++ M GC PD + +++ A
Sbjct: 678 ARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 711
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ LH+ AE + EL PT ++ LLL A+ SG + E V ++ K
Sbjct: 533 ILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS 592
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P N+ ++ + G + M+R TY + +N YG+A
Sbjct: 593 GLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG-DADVGTYNVAVNAYGRAGYVGRM 651
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F + + ++ T+TA + A+AR + E++ AG PD L+ A
Sbjct: 652 EAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 711
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/348 (60%), Positives = 262/348 (75%), Gaps = 26/348 (7%)
Query: 12 KKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILR 71
K G +IDK G R+F+ KK+SRKR G++RG+GWKYGSGFVDG+FPVLSP AQ IL
Sbjct: 67 KNRKHQGAYIDKEGVARTFDRKKISRKRGGAMRGRGWKYGSGFVDGVFPVLSPMAQDILE 126
Query: 72 FVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSI-------- 123
FVQ+ D IW++ D++PPTH WDD++NV+VQLRLN++WDPI+ + C I
Sbjct: 127 FVQKGTDVAKIWESLDNIPPTHNLWDDILNVAVQLRLNRQWDPIISV-CEWIVYRSSFRP 185
Query: 124 ------LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
LLI+AYG+K KAE Y +L+++C+PTEDTYALLL+AYC + L +AE V
Sbjct: 186 DIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVI 245
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM+++G+PPSA VYN+Y+DGLLK KAVE++QRMK++ C+ +TETYTLMIN+YGK+
Sbjct: 246 SEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKS 305
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A+K+FNEM+S CK NICTYTALVNAFAREGLCE+AEE+FEQ+Q AG EPDVYAY
Sbjct: 306 KQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAY 365
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLH 334
NALMEAY + S M HMGCEPDRASYNI+VDAYGRAGLH
Sbjct: 366 NALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLH 413
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ A + E+ C TY L+ A+ GL EKAE VF +M++
Sbjct: 297 LMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQA 356
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ + G PQ A EIF M+ C+P +Y ++++ YG+A A
Sbjct: 357 GHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREA 416
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F ++ P + ++ L++A AR G E++ QL +G+ PD +A NA++ A
Sbjct: 417 EATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHA 476
Query: 304 Y----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y RL++ M + D S+N+ V+AY RAG
Sbjct: 477 YARAGRLDDMERLLAAMDLAGSADVGSHNVAVNAYARAG 515
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ LH++AE T+ L PT ++ LLL A+ SG + + E V ++ K
Sbjct: 402 ILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKS 461
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P N+ + + G + M ++ + +N Y +A
Sbjct: 462 GLRPDTFALNAMLHAYARAGRLDDMERLLAAMDL-AGSADVGSHNVAVNAYARAGYLGRM 520
Query: 244 LKLFNEMRSHKCK-----PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
F +R K K ++ ++T+ + +AR+ + EIFE++ AG PD
Sbjct: 521 EAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVDAGCYPDAGTAK 580
Query: 299 ALMEA 303
LM A
Sbjct: 581 VLMAA 585
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/348 (58%), Positives = 266/348 (76%), Gaps = 30/348 (8%)
Query: 17 DG-FFIDKNGK--LRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFV 73
DG ++IDK+G R+F+ KK+SRKR G+++G+GWKYGSGFVDG+FPVLSP AQ +L V
Sbjct: 53 DGAYYIDKDGGGVARTFDRKKISRKRGGAIKGRGWKYGSGFVDGVFPVLSPMAQDVLELV 112
Query: 74 Q-REVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSIL-------- 124
Q R D+ ++W++ D +P H WDD++NV+VQLRLN++W+PI+ + C +L
Sbjct: 113 QTRGTDAASVWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITV-CEWVLRRSSFRPD 171
Query: 125 ------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
LI+AYGQK +AE Y+ LL++RC+PTEDTYALLL+AYC SG L +AE V
Sbjct: 172 IICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVIS 231
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM++ G+PP+A VYN+Y+DGLLK +KAVE++QRMK++ C+ +TETYTLMIN+YGKA+
Sbjct: 232 EMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAN 291
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ +L++F EM+S CKPNICTYTALVNAFAREGLCE+AEE+FE++Q AG EPDVYAYN
Sbjct: 292 QPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYN 351
Query: 299 ALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
ALMEAY + S M HMGCEPDRASYNI+VDA+GRAGLH+
Sbjct: 352 ALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQ 399
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 136/270 (50%), Gaps = 24/270 (8%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKK----WDPIVLMSCVS-----ILLIEAYGQKSLHKK 137
+ +PPT ++ ++ ++ R ++K + + C + L+I YG+ +
Sbjct: 236 NGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMS 295
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+ + E+ C P TY L+ A+ GL EKAE VF EM++ G P YN+ ++
Sbjct: 296 SLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALME 355
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G PQ A EIF M+ C+P +Y ++++ +G+A A F E++ +P
Sbjct: 356 AYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP 415
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLI 307
+ ++ L++A AR G EE+ QL +G+ PD +A NA++ AY RL
Sbjct: 416 TMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLF 475
Query: 308 SRMHMG-----CEPDRASYNIMVDAYGRAG 332
+ M G PD ++YN+MV+AYGRAG
Sbjct: 476 AAMERGDGAIAGAPDTSTYNVMVNAYGRAG 505
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A+G+ LH++AE + EL PT ++ LLL A+ SG + + E V ++ K
Sbjct: 387 ILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKS 446
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD----CCQPSTETYTLMINLYGKASK 239
GL P N+ ++ + G +F M+R P T TY +M+N YG+A
Sbjct: 447 GLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGY 506
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
F + + ++ T+T+ + A+AR+ + +FE++ AG PD
Sbjct: 507 LDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKV 566
Query: 300 LMEA 303
L+ A
Sbjct: 567 LLAA 570
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 15/218 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + L + A + + C P +Y +L+ A+ +GL ++AEA F+E+++ G
Sbjct: 353 LMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQG 412
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + GN + E+ ++ + +P T M+N YG+A +
Sbjct: 413 MRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDME 472
Query: 245 KLFNEMR----SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+LF M + P+ TY +VNA+ R G + E F L G+ DV + +
Sbjct: 473 RLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSR 532
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
+ AY R+ M GC PD + +++ A
Sbjct: 533 IGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAA 570
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/348 (57%), Positives = 265/348 (76%), Gaps = 30/348 (8%)
Query: 17 DG-FFIDKNGK--LRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFV 73
DG ++IDK+G R+F+ KK+SRKR G+++G+GWKYGSGFVDG+FPVLSP AQ +L V
Sbjct: 53 DGAYYIDKDGGGVARTFDRKKISRKRGGAIKGRGWKYGSGFVDGVFPVLSPMAQDVLELV 112
Query: 74 Q-REVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSIL-------- 124
Q R D+ ++W++ D +P H WDD++NV+VQLRLN++W+PI+ + C +L
Sbjct: 113 QTRGTDAASVWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITV-CEWVLRRSSFRPD 171
Query: 125 ------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
LI+AYGQK +AE Y+ LL++RC+PTEDTYALLL+AYC SG L +AE V
Sbjct: 172 IICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVIS 231
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM++ G+PP+A VYN+Y+DGLLK +KAVE++QRMK++ C+ +TZTY LMIN+YGKA+
Sbjct: 232 EMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKAN 291
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ +L++F EM+S CKPNICTYTALVNAFAREGLCE+AEE+FE++Q AG EPDVYAYN
Sbjct: 292 QPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYN 351
Query: 299 ALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
ALMEAY + S M HMGCEPDRASYNI+VDA+GRAGLH+
Sbjct: 352 ALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQ 399
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 24/270 (8%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKK----WDPIVLMSCVS-----ILLIEAYGQKSLHKK 137
+ +PPT ++ ++ ++ R ++K + + C + L+I YG+ +
Sbjct: 236 NGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMS 295
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+ + E+ C P TY L+ A+ GL EKAE VF EM++ G P YN+ ++
Sbjct: 296 SLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALME 355
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G PQ A EIF M+ C+P +Y ++++ +G+A A F E++ +P
Sbjct: 356 AYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP 415
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLI 307
+ ++ L++A AR G EE+ QL +G+ PD +A NA++ AY RL
Sbjct: 416 TMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLF 475
Query: 308 SRMHMG-----CEPDRASYNIMVDAYGRAG 332
+ M G PD ++YN++V+AYGRAG
Sbjct: 476 AAMERGDGASAGAPDTSTYNVLVNAYGRAG 505
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 15/218 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + L + A + + C P +Y +L+ A+ +GL ++AEA F+E+++ G
Sbjct: 353 LMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQG 412
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + GN + E+ ++ + +P T M+N YG+A +
Sbjct: 413 MRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDME 472
Query: 245 KLFNEMR----SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+LF M + P+ TY LVNA+ R G + E F L G+ DV + +
Sbjct: 473 RLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSR 532
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
+ AY R+ M GC PD + +++ A
Sbjct: 533 IGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAA 570
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A+G+ LH++AE + EL PT ++ LLL A+ SG + + E V ++ K
Sbjct: 387 ILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKS 446
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR----DCCQPSTETYTLMINLYGKASK 239
GL P N+ ++ + G +F M+R P T TY +++N YG+A
Sbjct: 447 GLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGY 506
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
F + + ++ T+T+ + A+AR+ + +FE++ AG PD
Sbjct: 507 LDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKV 566
Query: 300 LMEA 303
L+ A
Sbjct: 567 LLAA 570
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 168/204 (82%), Gaps = 11/204 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+ LL+++C+PTEDTYALLL+AYC +G L +AE V EMR++G+PP+A VYN+Y+DGLLK
Sbjct: 1 MALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKA 60
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+KAVE++QRMKR+ C+ +TET+TLMIN+YGKA + ++K+FNEM+S CKPNICTY
Sbjct: 61 RCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTY 120
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-H 311
TALVNAFAREGLCE+AEE+FE++Q AG EPDVYAYNALMEAY + S M H
Sbjct: 121 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 180
Query: 312 MGCEPDRASYNIMVDAYGRAGLHE 335
MGCEPDRASYNI+VDAYGRAGLHE
Sbjct: 181 MGCEPDRASYNILVDAYGRAGLHE 204
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 10/219 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ + + E+ C P TY L+ A+ GL EKAE VF EM++
Sbjct: 87 LMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA 146
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ + G PQ A EIF M+ C+P +Y ++++ YG+A A
Sbjct: 147 GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDA 206
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F E++ P + ++ L+ A AR G EE+ QL +G+ PD +A NA++ A
Sbjct: 207 EAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNA 266
Query: 304 Y----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y RL + M + D +YN+ V+AYGRAG
Sbjct: 267 YARAGRLDDMERLFAAMERRGDADVGTYNVAVNAYGRAG 305
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + L + A + + C P +Y +L+ AY +GL E AEAVF E+++ G
Sbjct: 158 LMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRG 217
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + GN + E+ ++ + P T M+N Y +A +
Sbjct: 218 MSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDME 277
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF M + ++ TY VNA+ R G E F + G+ DV + A M AY
Sbjct: 278 RLFAAM-ERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAY 336
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDA 327
++ M GC PD + +++ A
Sbjct: 337 ARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 370
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ LH+ AE + EL PT ++ LLL A+ SG + E V ++ K
Sbjct: 192 ILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS 251
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P N+ ++ + G +F M+R TY + +N YG+A
Sbjct: 252 GLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRM 310
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F + + ++ T+TA + A+AR + E++ AG PD L+ A
Sbjct: 311 EAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 370
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 165/204 (80%), Gaps = 11/204 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y LL++RC+PTEDTYALLL+AYC +G L +AE V EMR++G+PPSA VYN+Y+DGLLK
Sbjct: 2 YAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLK 61
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+KAVE++QRMKR+ C+ +TETYTLMIN+YGK+ + A+K+F EM+S CK NICT
Sbjct: 62 ARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICT 121
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM- 310
YTALVNAFAREGLCE+AEE+FE++Q AG EPDVYAYNALMEAY + S M
Sbjct: 122 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQ 181
Query: 311 HMGCEPDRASYNIMVDAYGRAGLH 334
HMGCEPDRASYNI+VDAYGRAGLH
Sbjct: 182 HMGCEPDRASYNILVDAYGRAGLH 205
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 10/222 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ A + E+ C TY L+ A+ GL EKAE VF EM++
Sbjct: 89 LMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQA 148
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ + G PQ A EIF M+ C+P +Y ++++ YG+A A
Sbjct: 149 GHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREA 208
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F ++ P + ++ L+ A AR G EE+ QL +G+ PD A NA++ A
Sbjct: 209 EAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNA 268
Query: 304 Y----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
Y RL++ M D +YN+ V+AYGRAG E
Sbjct: 269 YGRAGRLDDMERLLAAMERRGTRDVGTYNVAVNAYGRAGYLE 310
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA Y + RC +TY L++ Y S A VF+EM+ G + Y +
Sbjct: 66 EKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTAL 125
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++ + G +KA E+F+ M++ +P Y ++ Y +A A ++F+ M+ C
Sbjct: 126 VNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGC 185
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+P+ +Y LV+A+ R GL EAE +FE L+ G+ P + ++ L+ A+
Sbjct: 186 EPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEE 245
Query: 306 LISRMHM-GCEPDRASYNIMVDAYGRAG 332
+++++H G PD + N M++AYGRAG
Sbjct: 246 VMAQLHKSGLAPDTIALNAMLNAYGRAG 273
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + + A + + C P +Y +L+ AY +GL +AEAVF +++ G
Sbjct: 160 LMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQG 219
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + + GN + E+ ++ + P T M+N YG+A +
Sbjct: 220 MAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDME 279
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L M + ++ TY VNA+ R G E E F L+ G+ DV + + M AY
Sbjct: 280 RLLAAMERRGTR-DVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAY 338
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDA 327
+ M GC PD + ++V A
Sbjct: 339 ARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAA 372
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ LH++AE + L PT ++ LLL A+ SG + + E V ++ K
Sbjct: 194 ILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKS 253
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + N+ ++ + G + M+R + TY + +N YG+A
Sbjct: 254 GLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGTYNVAVNAYGRAGYLERM 312
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F + ++ T+T+ + A+AR+ EIFE++ AG PD L+ A
Sbjct: 313 EAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAA 372
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/166 (68%), Positives = 132/166 (79%), Gaps = 17/166 (10%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
PSAVVYN+YI+GL+KGGN KA EIF+RMK+D C+ +TETYT++INLYGKA KSFMAL L
Sbjct: 4 PSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALIL 63
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
F+EM +HKCKPNICTYTALVNAF REGLCE+AEE+FEQ+Q AG+EPDVYAYNALME Y+
Sbjct: 64 FHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKF 123
Query: 307 IS-----------------RMHMGCEPDRASYNIMVDAYGRAGLHE 335
S HMGCEPDRASYNI+VDAYG+AG +
Sbjct: 124 SSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQD 169
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 17/229 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A + E+ +C P TY L+ A+ GL EKAE VF +M++
Sbjct: 46 MLINLYGKAGKSFMALILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEA 105
Query: 184 GLPPSAVVYNSYIDG------LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
GL P YN+ ++ + G P A EIF M+ C+P +Y ++++ YGKA
Sbjct: 106 GLEPDVYAYNALMETYKFSSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKA 165
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A +F +M+ P + ++ L +A+++ G + EEI Q+ +G++ + Y
Sbjct: 166 GFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEILNQMCKSGLKLNTYVL 225
Query: 298 NALMEAY----------RLISRMHMGC-EPDRASYNIMVDAYGRAGLHE 335
+++ Y ++ M G D ++YNI+++ YG+AG E
Sbjct: 226 KSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGXIE 274
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE + + C T +TY +L+ Y +G A +F EM + P+ Y + +
Sbjct: 24 KAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMALILFHEMTTHKCKPNICTYTALV 83
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKASKSFMALKLFNEM 250
+ ++ G +KA E+F++M+ +P Y ++ Y +A + A ++F+ M
Sbjct: 84 NAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPYGAAEIFSLM 143
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
+ C+P+ +Y LV+A+ + G ++AE +F+ ++ GI P + ++ L AY
Sbjct: 144 QHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNV 203
Query: 305 ----RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++++M G + + M++ YGR G
Sbjct: 204 NKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLG 236
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +L+ AY +G + AEAVF++M++ G+ P+ + K GN K
Sbjct: 148 CEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCE 207
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI +M + + +T M+NLYG+ + ++ M +I TY L+N +
Sbjct: 208 EILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRY 267
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC 314
+ G E E+ F+ L G++PDV + + M AY ++++ C
Sbjct: 268 GQAGXIERMEDFFQLLPSKGLKPDVVTWTSRMGAYS-XKKLYLKC 311
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++AYG+ AE + ++ PT ++ +L AY G + K E + +M K
Sbjct: 157 ILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEILNQMCKS 216
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL + V S ++ + G K E+ + M++ TY ++IN YG+A
Sbjct: 217 GLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGXIERM 276
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
F + S KP++ T+T+ + A++ + L + EIFE+ A +
Sbjct: 277 EDFFQLLPSKGLKPDVVTWTSRMGAYSXKKLYLKCLEIFEETIDAKV 323
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 175/316 (55%), Gaps = 27/316 (8%)
Query: 44 RGKGW-KYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINV 102
RG+GW D PVLSP A + R + + +WDA D+LP +W+DL+
Sbjct: 12 RGRGWGNTPQSRSDRAPPVLSPGAAALTRSILTQKSPQDVWDALDALPRCVGSWEDLMET 71
Query: 103 SVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSLHKKAEFTYLELLDS 148
+ R +KW +++ C ++L+ +AYG+ +AE T+ +
Sbjct: 72 VAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLM-DAYGRTKQWTEAENTFHLMKKF 130
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C+PTE ++ +L+ AY G LE+AE V EM++ P V YN+Y++ L K G+ Q A
Sbjct: 131 QCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLA 190
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++F+ M+ P+ T+TLMIN+YGKA S A LF MR C P++ TYTAL+NA
Sbjct: 191 EDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINA 250
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPD 317
AREG C AEEIF +LQ G PD+Y YNAL+EAY + + G + D
Sbjct: 251 HAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKAD 310
Query: 318 RASYNIMVDAYGRAGL 333
SYNI++DA+GRAGL
Sbjct: 311 HVSYNILIDAFGRAGL 326
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I YG+ KAE + + + C P+ TY L+ A+ G +AE +F E++
Sbjct: 211 LMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSV 270
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ +GG+P A E+F+ M + +Y ++I+ +G+A A
Sbjct: 271 GFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDA 330
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ M+ KP + ++ L++AF + G +AE +L+ G+EPD + +N+L+ A
Sbjct: 331 QAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGA 390
Query: 304 YRLISRMHMG-----------CEPDRASYNIMVDAYGRAGLHE 335
Y RM C+PD + N +++ Y + G E
Sbjct: 391 YGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIE 433
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A+ + +L++ +Y +L+ A+ +GL+ A+A++ M+K G
Sbjct: 282 LLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVG 341
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ + + +K G A +R++ +P T + ++ YG + +
Sbjct: 342 FKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKME 401
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L+ M+ CKP+I T L+N +A+ G E AEEIF L+ G PDV ++ +LM AY
Sbjct: 402 SLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAY 461
Query: 305 --RLISR---------MHMGCEPDRASYNIMVDA 327
R + R + GC PDRA+ +++ +
Sbjct: 462 SKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSS 495
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+E + + AE + E+ + P +T+ L++ Y + KAE +F+ MRK
Sbjct: 178 LEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALC 237
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
PPS Y + I+ + GN +A EIF ++ P TY ++ Y + A +
Sbjct: 238 PPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKE 297
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
+F M K + +Y L++AF R GL +A+ I++ ++ G +P + ++ L+ A+
Sbjct: 298 VFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFV 357
Query: 306 LISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
R+ MG EPD +N ++ AYG +G
Sbjct: 358 KAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSG 395
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A+G+ L A+ Y + PT ++ LLL A+ +G + AE R +
Sbjct: 316 ILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM 375
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P ++NS + G K +++ M+ C+P T +IN+Y + A
Sbjct: 376 GVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERA 435
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++FN + S P++ ++T+L+ A+++ L + +++++ AG PD L+ +
Sbjct: 436 EEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSS 495
Query: 304 YR 305
R
Sbjct: 496 CR 497
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
ILL+ A+ + AE ++ L+S + P + LL AY SG ++K E+++ M+
Sbjct: 350 ILLLSAFVKAGRVTDAE-NFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQ 408
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P + N+ I+ +GG ++A EIF ++ P ++T ++ Y K
Sbjct: 409 GSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYR 468
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+ ++ +M C P+ T L+++ C E++ E
Sbjct: 469 KCVSVYQKMLIAGCIPDRATAKVLLSS------CRGPEQVKE 504
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 184/321 (57%), Gaps = 27/321 (8%)
Query: 41 GSLRGKGW-KYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDL 99
G+ GK W + G F + VLSP A + +F++ + D+ IW+A D+LP H TWD+
Sbjct: 12 GTRHGKAWLETGRNFTEIELIVLSPAASSLAQFLRMQEDATAIWNALDNLPRGHDTWDNF 71
Query: 100 INVSVQLRLNKKWDPIVLMSCVSIL--------------LIEAYGQKSLHKKAEFTYLEL 145
++V V K W P V C +L LI+AYG+ + AE T+ +
Sbjct: 72 MSVVVHFWNYKDW-PRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRM 130
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
++ C+P E+T+ +L+ Y ++G EKAE +F +M+K G P + N+++ L
Sbjct: 131 QEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEY 190
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++A +F+ +++ C+P+ +TY MI +YGKA + A L+ MR C PNICT+TAL
Sbjct: 191 RRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTAL 250
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GC 314
+NAFAR+GL EAE F++LQ +PD YAYNALMEAY + M GC
Sbjct: 251 MNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGC 310
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
PD S+NI+++AYGRAGL+E
Sbjct: 311 FPDTVSHNILINAYGRAGLYE 331
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 14/223 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ KAE Y + + C P T+ L+ A+ GL +AE F +++++
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ ++ +GG+P A+EIFQ M+R+ C P T ++ ++IN YG+A A
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAE 334
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F M+S PN+ + L++A+AR G EEAEE+ ++ G +PD YN+L+ AY
Sbjct: 335 KIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAY 394
Query: 305 --------------RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
+++ +PD +YN ++ Y +AG
Sbjct: 395 GVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGF 437
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AYG+ L++ AE + + + P + LLL AY +G +E+AE + M +
Sbjct: 319 ILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD 378
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC---CQPSTETYTLMINLYGKASKS 240
G P ++YNS I+ G + + +M + +P TY +I +Y +A
Sbjct: 379 GTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFI 438
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +LF + K P+ T+TAL+ +A++ L + I +++ +G D L
Sbjct: 439 PRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVL 498
Query: 301 MEAYR 305
A R
Sbjct: 499 FSACR 503
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 184/321 (57%), Gaps = 27/321 (8%)
Query: 41 GSLRGKGW-KYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDL 99
G+ GK W + G F + VLSP A + +F++ + D+ IW+A D+LP H TWD+
Sbjct: 12 GTRHGKAWLETGRNFTEIELIVLSPAASSLAQFLRMQEDATAIWNALDNLPRGHDTWDNF 71
Query: 100 INVSVQLRLNKKWDPIVLMSCVSIL--------------LIEAYGQKSLHKKAEFTYLEL 145
++V V K W P V C +L LI+AYG+ + AE T+ +
Sbjct: 72 MSVVVHFWNYKDW-PRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRM 130
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
++ C+P E+T+ +L+ Y ++G EKAE +F +M+K G P + N+++ L
Sbjct: 131 QEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEY 190
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++A +F+ +++ C+P+ +TY MI +YGKA + A L+ MR C PNICT+TAL
Sbjct: 191 RRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTAL 250
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GC 314
+NAFAR+GL EAE F++LQ +PD YAYNALMEAY + M GC
Sbjct: 251 MNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGC 310
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
PD S+NI+++AYGRAGL+E
Sbjct: 311 FPDTVSHNILINAYGRAGLYE 331
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 117/223 (52%), Gaps = 14/223 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ KAE Y + + C P T+ L+ A+ GL +AE F +++++
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ ++ +GG+P A+EIFQ M+R+ C P T ++ ++IN YG+A A
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAE 334
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F M+S PN+ + L++A+AR G EEAEE+ ++ G +PD YNAL+ AY
Sbjct: 335 KIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAY 394
Query: 305 --------------RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
+++ +PD +YN ++ Y +AG
Sbjct: 395 GVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGF 437
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AYG+ L++ AE + + + P + LLL AY +G +E+AE + M +
Sbjct: 319 ILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD 378
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC---CQPSTETYTLMINLYGKASKS 240
G P ++YN+ I+ G + + +M + +P TY +I +Y +A
Sbjct: 379 GTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFI 438
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +LF + K P+ T+TAL+ +A++ L + I +++ +G D L
Sbjct: 439 PKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVL 498
Query: 301 MEAYR 305
A R
Sbjct: 499 FSACR 503
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 171/307 (55%), Gaps = 35/307 (11%)
Query: 61 VLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLM-- 118
VLSPTA ++R V + +WD D+LP TW+ ++ +LR + W ++L+
Sbjct: 12 VLSPTAAVLMRNVIAQKSHQDVWDVLDALPRGIGTWEAIMENVAELRRLRNWRSVILILE 71
Query: 119 ------------SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
C + +LI+AYG+ ++AE T+ + D +C+PTE ++ +LL AY
Sbjct: 72 WILQGTMFKPDVGCFN-MLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSR 130
Query: 167 SGLLEKAEAVFREMRKYGLPPSAV---------VYNSYIDGLLKGGNPQKAVEIFQRMKR 217
LEKAE +F EM++ P V YN+Y++ L K G +A + F+ M++
Sbjct: 131 GVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQK 190
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
P+ T+T+MIN+YGKA S A LF MR C PN+ TYTAL+NA AREG C
Sbjct: 191 QGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVR 250
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVD 326
AEEIF +LQ G PDVY YNAL+EAY + + G PD+ SYNI++D
Sbjct: 251 AEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILID 310
Query: 327 AYGRAGL 333
A+GRAGL
Sbjct: 311 AFGRAGL 317
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 116/223 (52%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I YG+ KA+ + + + C P TY L+ A+ G +AE +F E++
Sbjct: 202 IMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSV 261
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ ++ +G +P A E+FQ M +P +Y ++I+ +G+A + A
Sbjct: 262 GFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADA 321
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ M+ KP + ++ L++++A+ G EAE + +++ +G++PD + +N+L+ A
Sbjct: 322 QAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSA 381
Query: 304 Y-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
Y L S + +PD ++ N +++AY + G E
Sbjct: 382 YGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIE 424
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EAY + A+ + ++++ P + +Y +L+ A+ +GL A+AV+ M++ G
Sbjct: 273 LLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAG 332
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ + + K G +A + + ++ +P T + +++ YG + +
Sbjct: 333 FKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEME 392
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M S KP+I T L+NA+A+ G E+AEE+F L+ G+ PDV ++ +LM AY
Sbjct: 393 SLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAY 452
Query: 305 --RLISR---------MHMGCEPDRASYNIMVDA 327
R + R + GC PDRA+ + + +
Sbjct: 453 AQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSS 486
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+E G+ +AE T+ ++ +P +T+ +++ Y + +KA+ +FR MRK
Sbjct: 169 LEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALC 228
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
PP+ Y + ++ + GN +A EIF ++ P TY ++ Y + A +
Sbjct: 229 PPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKE 288
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
+F M +P+ +Y L++AF R GL +A+ +++ ++ AG +P + ++ L+ +Y
Sbjct: 289 VFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYA 348
Query: 305 ---------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
RL+ + + G +PD +N ++ AYG +G
Sbjct: 349 KAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSG 386
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A+G+ L A+ Y + ++ PT ++ LLL +Y +G + +AE + RE+
Sbjct: 307 ILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENS 366
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P ++NS + G + + + M +P T +IN Y + A
Sbjct: 367 GVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKA 426
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
++FN + S P++ ++T+L+ A+A+ L + IF+++ AG PD
Sbjct: 427 EEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPD 476
>gi|224122684|ref|XP_002318900.1| predicted protein [Populus trichocarpa]
gi|222859573|gb|EEE97120.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/109 (78%), Positives = 101/109 (92%)
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+K GNPQ+A+EIFQR+K D CQPST+TYTL+INL+GKAS+S+MALKLFNEMRS KC+P+I
Sbjct: 1 MKAGNPQRAIEIFQRLKNDGCQPSTDTYTLLINLHGKASQSYMALKLFNEMRSQKCRPDI 60
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
CTYTALVNAFAREGLCE+AEEIFEQ+Q +EPDVY YNALMEAYRL+S
Sbjct: 61 CTYTALVNAFAREGLCEKAEEIFEQMQEDKLEPDVYTYNALMEAYRLVS 109
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ L + C P+ DTY LL+ + + A +F EMR P Y + ++ +
Sbjct: 13 FQRLKNDGCQPSTDTYTLLINLHGKASQSYMALKLFNEMRSQKCRPDICTYTALVNAFAR 72
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
G +KA EIF++M+ D +P TY ++ Y
Sbjct: 73 EGLCEKAEEIFEQMQEDKLEPDVYTYNALMEAY 105
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI +G+ S A + E+ +C P TY L+ A+ GL EKAE +F +M++
Sbjct: 30 LLINLHGKASQSYMALKLFNEMRSQKCRPDICTYTALVNAFAREGLCEKAEEIFEQMQED 89
Query: 184 GLPPSAVVYNSYIDG 198
L P YN+ ++
Sbjct: 90 KLEPDVYTYNALMEA 104
>gi|224122688|ref|XP_002318901.1| predicted protein [Populus trichocarpa]
gi|222859574|gb|EEE97121.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 99/123 (80%), Gaps = 1/123 (0%)
Query: 2 RASNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPV 61
R NS+ VKK+ D +IDK+GK R F+HKK+SRKRCGSLRG+GWKYGSGFVDGIFPV
Sbjct: 25 REKNSSSGDVKKWKSDRVYIDKHGKWRIFDHKKMSRKRCGSLRGQGWKYGSGFVDGIFPV 84
Query: 62 LSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCV 121
LSP A QIL FV++EVD N +W A D+LP TH TWDDLINV+VQLRLNK+WDPI L+ C
Sbjct: 85 LSPVAHQILNFVRKEVDPNNVWAALDTLPVTHETWDDLINVAVQLRLNKQWDPIALI-CQ 143
Query: 122 SIL 124
IL
Sbjct: 144 WIL 146
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/115 (69%), Positives = 91/115 (79%), Gaps = 11/115 (9%)
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
N + + SKS MA +F+EMR+ +CKPNICT+TALVNA AREGLCE+AEEIFEQ+Q AG E
Sbjct: 4 NRFVQESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYE 63
Query: 292 PDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
PDVYAYNALME+Y + S M HMGCEPDRASYNIMVDAYGRAGLHE
Sbjct: 64 PDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE 118
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 113/218 (51%), Gaps = 11/218 (5%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+ Q+S A+ + E+ RC P T+ L+ A GL EKAE +F +M++ G P
Sbjct: 6 FVQESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPD 65
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
YN+ ++ + G P A EIF M+ C+P +Y +M++ YG+A A +F
Sbjct: 66 VYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 125
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
EM+ P + ++ L++A++ G + E+I Q+ +G++PD + N+++ Y
Sbjct: 126 EMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLG 185
Query: 305 ------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
L S M G C D ++YNI+++ YGRAG E
Sbjct: 186 QFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVE 223
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 26/282 (9%)
Query: 71 RFVQREVDSNTIWDAFDSL-----PPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILL 125
RFVQ E S+ + FD + P T+ L+N + L +K + I +
Sbjct: 5 RFVQ-ESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYE 63
Query: 126 IEAYGQKSL---HKKAEFTY-----LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAV 176
+ Y +L + +A F Y L+ C P +Y +++ AY +GL E A+AV
Sbjct: 64 PDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAV 123
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F EM++ G+ P+ + + GN K +I +M + +P T M+NLYG+
Sbjct: 124 FEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGR 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ LF+ M+ C+ +I TY L+N + R G E EE+F+ L +EPDV
Sbjct: 184 LGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVT 243
Query: 297 YNALMEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
+ + + AY L +M GC PD + +++ A
Sbjct: 244 WTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSA 285
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 35/198 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV------- 176
++++AYG+ LH+ A+ + E+ PT ++ LLL AY +G + K E +
Sbjct: 106 IMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKS 165
Query: 177 ----------------------------FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
F M+K YN I+ + G ++
Sbjct: 166 GLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERM 225
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+FQ + +P T+T I Y + L+LF +M C P+ T L++A
Sbjct: 226 EELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSA 285
Query: 269 FAREGLCEEAEEIFEQLQ 286
+ E E+ + +
Sbjct: 286 CSSEEQIEQVTNVVRTMH 303
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 11/225 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ G+ +A E+ D+ C+P TY L+ +G L +A +F EMR+ G
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YNS I GL K G QKA+E+ + M+R C P TY+ +I GK ++ A
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
KLF EM+ KP+ T+TAL++A + G ++A E+ ++++ G++P V YNAL+
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKC 338
EAY L+ M GC+PD +Y+ ++ +A + C
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 129/249 (51%), Gaps = 15/249 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
+D+ + + ++R N + +C LI G+ +A + E+ + C+P
Sbjct: 95 FDEALRLLAEMRDNGCVPDVRTYNC----LISTLGKAGRLSEAFTLFAEMRERGCVPDTF 150
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ G +KA + EM ++G PP + Y+S I GL K G KA ++FQ M
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR +P + T+T +++ GKA + AL+L +EM+ KP + TY AL+ F + G
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL 270
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
EA + ++++ G +PDV Y+ L+ EA +++ +M GC PD +YN +
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330
Query: 325 VDAYGRAGL 333
++ G+AGL
Sbjct: 331 INGLGKAGL 339
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 24/241 (9%)
Query: 107 RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS---RCI-PTEDTYALLLK 162
R +K D I + L++A G+ A LELLD R + P TY L+
Sbjct: 212 RRGRKPDSITFTA-----LMDALGKAGRVDDA----LELLDEMKERGVKPGVVTYNALIA 262
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
+ G L +A + EM++ G P V Y+ I GL+K +A ++ ++M+++ C P
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
T TY +IN GKA A +LF+ M+S C P++ TY+ L+ A + E A +F
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382
Query: 283 EQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
E+++ GI+PD++ Y +++ +A RL S M G PD +YN +++ GR
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442
Query: 332 G 332
G
Sbjct: 443 G 443
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +G+ +A E+ + C P TY+ L+ + L++A V ++M K G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP + YN+ I+GL K G A +F RMK C P TY+ +I GKA++ A
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF EM S +P++ TY +++ + G ++A+ +F +++G G+ PDV YNA +
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMV 325
EA ++ M G PD A+Y+ ++
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALL 471
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A + ++A+ + EL ++ P +Y+ L+ + +G E A V EM+ G
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ +D L K G +A+ + M+ + C P TY +I+ GKA + A
Sbjct: 75 CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF EMR C P+ TY +L+ + G ++A E+ E+++ G PDV Y++L+
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A++L M G +PD ++ ++DA G+AG
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL A +G E+A+ +F E++ P V Y+ I+ L + G + A+E+
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ C+P+ TY +++ GKA + AL+L EMR + C P++ TY L++ +
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G EA +F +++ G PD + YN+L+ +A L+ M GC PD +
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 321 YNIMVDAYGRAG 332
Y+ ++ G+ G
Sbjct: 187 YSSLITGLGKDG 198
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ KA + E+ P T+ L+ A +G ++ A + EM++ G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ I G K G+ +A + MKR+ C+P TY+ +I KAS+ A
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +M C P+ TY L+N + GL +A +F++++ G PDV Y+ L+ A
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369
Query: 305 RLISRMHMGC-----------EPDRASYNIMVDAYGRAG 332
+R+ C +PD +Y ++ G+AG
Sbjct: 370 GKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 90 PPTHATWDDLINVSVQLRL------------NKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
PP T++ LIN + L +K +P V+ LI A G+ + +
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST---LITALGKAARVES 377
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E+ P TY ++ +G ++ A+ +F EMR GL P + YN++++
Sbjct: 378 ACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLN 437
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +GG ++A +IF+ MK P TY ++ K + A L E+ C
Sbjct: 438 SLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAF 497
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM------- 310
+ + + G +EA E+ + G+ P +YNAL++A R+
Sbjct: 498 DSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTL 557
Query: 311 ----HMGCEPDRASYNIMVDAYGRAG 332
G +PD SY+ ++ A G+ G
Sbjct: 558 EDLKEQGGKPDIVSYSSLISALGQTG 583
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
EL++ C + L+ G +++A + + GL P A YN+ ID L K G
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A + +K +P +Y+ +I+ G+ + A +L EM K + +Y+
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYS 608
Query: 264 ALV 266
LV
Sbjct: 609 NLV 611
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I A SL ++A + ++ S C P TY LL Y +G +A V +EM G
Sbjct: 195 ITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGC 254
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P+ V YN + + G A E+ M +P TYT +++ Y +A K A++
Sbjct: 255 LPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAME 314
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
++N+MR+ C PN T+ AL+ + E IFE +Q G+EPD+ +N+L+ A+
Sbjct: 315 IYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFG 374
Query: 305 ---------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ M G EPD+A++NI+++AYGR G
Sbjct: 375 KNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCG 412
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ + +A E+ + C+P TY LL A+ +GL A + M G
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG 288
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y S + + G ++A+EI+ +M+ C P++ T+ +I ++GK +
Sbjct: 289 IEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMM 348
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M++ +P+I T+ +L+ AF + G+ E ++F ++ AG EPD +N L+EAY
Sbjct: 349 VIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAY 408
Query: 305 -------RLIS----RMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ +S + GC PD A++N ++ A R G E
Sbjct: 409 GRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWE 450
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI A + K+A + ++ ++ P+ TY +++ Y G E +F EM+
Sbjct: 123 LISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQ 182
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I G ++A E+F +MK C P TY ++++YGKA A
Sbjct: 183 GIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEA 242
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ EM S C PNI TY L++AF R GLC A E+ + + GIEPDV+ Y +L+ A
Sbjct: 243 ANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSA 302
Query: 304 YRLISRMHMG-----------CEPDRASYNIMVDAYGR 330
Y ++ C P+ ++N ++ +G+
Sbjct: 303 YSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGK 340
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T A++L+ L +F+ +R+ G P Y S I L + ++A+
Sbjct: 80 PDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGF 139
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM-ALKLFNEMRSHKCKPNICTYTALVNAFA 270
F++MK QPS TY ++I+LYGK +S+ L+LF EM++ +P+ TY + A A
Sbjct: 140 FEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACA 199
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRA 319
LCEEA E+F Q++ + PD YNAL++ Y ++ M GC P+
Sbjct: 200 SGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIV 259
Query: 320 SYNIMVDAYGRAGL 333
+YN ++ A+GRAGL
Sbjct: 260 TYNELLSAFGRAGL 273
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + ++A Y ++ S C P T+ L+ + + + +F +M+ G
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG 358
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +NS + K G + +++F+ MK+ +P T+ ++I YG+ S AL
Sbjct: 359 VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL 418
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+++ M C P++ T+ L+ A AREG E AE I ++L + +P+ AY +++ AY
Sbjct: 419 SIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAY 478
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEAYG+ +A Y +L + C P T+ LL A G E AE + E+ +
Sbjct: 403 ILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRS 462
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ + Y S + GG +K E+ + + + +Y K S A
Sbjct: 463 SYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEA 522
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F MR H + T+ A+++ + ++G+ ++A + F L+ G+EPDV YN LM
Sbjct: 523 EDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGM 582
Query: 304 Y-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y L M G PD SYN ++ +Y + G
Sbjct: 583 YGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHG 622
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+K + KA T+ L + P TY L+ Y G+ K EA RE G
Sbjct: 544 MISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAG 603
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I K G A IF M + QP + TY + Y AL
Sbjct: 604 QTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEAL 663
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+ M CKP+ TY LV+A+ + G EE E I + ++ +
Sbjct: 664 SVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 47/239 (19%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ LL A+ +G+ + VFR M+K G P +N I+ + G+ +A+ I
Sbjct: 361 PDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSI 420
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + C P T+ ++ + + A + +E+ KPN Y ++++A+A
Sbjct: 421 YDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYAN 480
Query: 272 EG-----------------------------------LCEEAEEIFEQLQGAGIEPDVYA 296
G L +EAE+ F ++ G D
Sbjct: 481 GGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTST 540
Query: 297 YNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+NA++ Y M G EPD +YN ++ YGR G++ KC +L E
Sbjct: 541 FNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYR-KCEATLRE 598
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+ Y + SL +AE +L + + T+ ++ Y G+++KA F +R G
Sbjct: 509 FVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTG 568
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V YN + + G +K + P +Y +I Y K + A
Sbjct: 569 LEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSAT 628
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F+EM S+ +P+ TY V + G+ EA + + + G +PD Y L++AY
Sbjct: 629 RIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAY 688
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 48/189 (25%)
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
S + GL + G KA+E+F M++ +P T +M+ + G+ S+ +LF +R
Sbjct: 51 SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA------------------------ 288
++ YT+L++A +R +EA FEQ++ A
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170
Query: 289 ------------GIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
GI+PD Y YN + EA L ++M C PDR +YN ++
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230
Query: 326 DAYGRAGLH 334
D YG+AG +
Sbjct: 231 DVYGKAGWY 239
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ K+A E+ + C P+ TY L+ AY GLLE A + +M + G
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG 371
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + + G K G + AV+IF+ M+ + C+P+ T+ +I ++G K +
Sbjct: 372 IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMM 431
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F ++++ +C P+I T+ L++ F + G+ E +F++++ AG P+ +N L+ +Y
Sbjct: 432 KVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSY 491
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+ RM G PD +SYN ++ A R GL
Sbjct: 492 SRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGL 531
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 21/263 (7%)
Query: 91 PTHATWDDLINVSVQLRL--NKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAEF 140
PT T++ ++NV ++ + NK + M I LI + +L+++A
Sbjct: 233 PTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAG 292
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
E+ + P + TY LL Y S ++A V +EM G PPS V YNS I
Sbjct: 293 VLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYA 352
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + A+E+ +M +P TYT +++ + KA K A+++F EMR+ CKPNIC
Sbjct: 353 RDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNIC 412
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
T+ AL+ G E ++FE ++ PD+ +N L+ E + M
Sbjct: 413 TFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 472
Query: 311 -HMGCEPDRASYNIMVDAYGRAG 332
G P+R ++N ++ +Y R G
Sbjct: 473 KRAGFVPERDTFNTLISSYSRCG 495
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 156/366 (42%), Gaps = 91/366 (24%)
Query: 44 RGKGWKYGSGFVDGIFPVLSPTAQQILR------FVQREVDSNTIWDAFDSLP-----PT 92
RGK W +G LSP Q+IL+ F ++D + + F+ P
Sbjct: 74 RGKPWSHGR---------LSPPGQRILQTLIDPTFNLAQIDE-LLLELFEQQPGESDFSV 123
Query: 93 HATWDDLINV----------SVQLRL-----NKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
+ D++ + LR+ N+K ++L + ++I G+
Sbjct: 124 ESLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSA 183
Query: 138 AEFTYLELLDSRCIPTEDT----YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
A LL + C D Y ++ A+ +G +A VF++M + G P+ + YN
Sbjct: 184 AA----SLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYN 239
Query: 194 SYIDGLLKGGNP-QKAVEIFQRMKR--------------DCCQ----------------- 221
++ K G P K V + RMK CC+
Sbjct: 240 VILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL 299
Query: 222 ----PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
P TY ++++YGK+ +S A+++ EM + C P+I TY +L++A+AR+GL E+
Sbjct: 300 AGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLED 359
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVD 326
A E+ Q+ GI+PDV+ Y L+ + ++ M + GC+P+ ++N ++
Sbjct: 360 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 419
Query: 327 AYGRAG 332
+G G
Sbjct: 420 MHGNRG 425
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
A+++ G + A ++ + K G Y S I G ++AV +F++M+
Sbjct: 169 AVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228
Query: 218 DCCQPSTETYTLMINLYGKASKSFMAL-KLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C+P+ TY +++N+YGK + + L + M+S P+ TY L++ R L E
Sbjct: 229 VGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYE 288
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMV 325
EA + ++++ AG PD YNAL++ Y ++ M GC P +YN ++
Sbjct: 289 EAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLI 348
Query: 326 DAYGRAGLHE 335
AY R GL E
Sbjct: 349 SAYARDGLLE 358
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ + + + E+ + +P DT+ L+ +Y G ++A AV++ M + G
Sbjct: 452 LLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAG 511
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--GKASKSFM 242
+ P YN+ + L +GG +++ ++ MK C+P+ TY +++ Y GK +
Sbjct: 512 VNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMC 571
Query: 243 AL---------------------------------KLFNEMRSHKCKPNICTYTALVNAF 269
AL + F E+R P+I T A+V+ +
Sbjct: 572 ALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIY 631
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
R + +A EI + ++ G P + YN+LM Y L + G PD
Sbjct: 632 GRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDI 691
Query: 319 ASYNIMVDAYGRAG 332
SYN ++ AY R G
Sbjct: 692 ISYNTVIYAYCRNG 705
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 46/250 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC---------------MSGL 169
++ A + L K++E E+ D RC P E TY LL AY SG+
Sbjct: 522 VLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI 581
Query: 170 LE--------------------KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
+E + E F E+R+ G P N+ + + KA
Sbjct: 582 IEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKAN 641
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI MKR PS TY ++ +Y +++ + ++ E+ + +P+I +Y ++ A+
Sbjct: 642 EILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAY 701
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDR 318
R G +A + +++ +G PD+ YN + +Y S + GC+P++
Sbjct: 702 CRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQ 761
Query: 319 ASYNIMVDAY 328
++YN +VD Y
Sbjct: 762 STYNSIVDWY 771
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + ++ +C P T+ LL + +G+ + VF+E
Sbjct: 412 CTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKE 471
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P +N+ I + G+ +A+ +++RM P +Y ++ +
Sbjct: 472 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGL 531
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAR----EGLCEEAEEIFEQLQGAGIEPDVY 295
+ K+ EM+ +CKPN TY +L++A+A E +C AEEI+ + IEP
Sbjct: 532 WKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI----IEPRAV 587
Query: 296 AY----------NALMEAYR-LISRMHMGCEPDRASYNIMVDAYGR 330
+ LME R + G PD + N MV YGR
Sbjct: 588 LLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGR 633
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 108/236 (45%), Gaps = 18/236 (7%)
Query: 90 PPTHATWDDLINV---------SVQLR---LNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
PP+ T++ LI+ +++L+ + K P V L+ + + K
Sbjct: 338 PPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTT---LLSGFEKAGKDKA 394
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E+ + C P T+ L+K + G + VF +++ + P V +N+ +
Sbjct: 395 AVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLS 454
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G + +F+ MKR P +T+ +I+ Y + A+ ++ M P
Sbjct: 455 VFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNP 514
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRM 310
++ +Y A++ A AR GL +++E++ +++ +P+ Y +L+ AY + I RM
Sbjct: 515 DLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERM 570
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 18/192 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI------PTEDTYALLLKAYCMSGLLEKAEAVFR 178
++ YG++ + KA E+LD C+ P+ TY L+ Y S E++E + R
Sbjct: 627 MVSIYGRRQMVAKAN----EILD--CMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILR 680
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
E+ G+ P + YN+ I + G + A + M+ P TY I Y S
Sbjct: 681 EILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADS 740
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A+ + M H CKPN TY ++V+ + + +EA L+ ++P +
Sbjct: 741 MFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR--KLDPHI---- 794
Query: 299 ALMEAYRLISRM 310
++ E RL RM
Sbjct: 795 SMDEECRLSERM 806
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 82/176 (46%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L + E +LEL P T ++ Y ++ KA + M++ G PS YN
Sbjct: 601 LLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYN 660
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S + + N +++ EI + + +P +Y +I Y + + A ++ +EMR
Sbjct: 661 SLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRES 720
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
P+I TY + ++A + + EA ++ + G +P+ YN++++ Y ++R
Sbjct: 721 GPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNR 776
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 243 ALKLFNEMRSHKCKP---NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL++F +R+ K N +++ + G A + L G + DVYAY +
Sbjct: 146 ALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTS 205
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
++ EA + +M +GC+P +YN++++ YG+ G+
Sbjct: 206 MITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGM 250
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++ + PT TY +++ C G +E A +F EM+ GL P V YNS IDG K
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G V F+ MK CC+P TY +IN + K K L+ F EM+ + KPN+ +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM- 310
Y+ LV+AF +EG+ ++A + + ++ G+ P+ Y Y +L++AY RL + M
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262
Query: 311 HMGCEPDRASYNIMVDA 327
+G E + +Y ++D
Sbjct: 263 QVGVEWNVVTYTALIDG 279
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P + LL + G + + F++M G P+ YN ID + K G+ + A
Sbjct: 55 RVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAA 114
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ MK P T TY MI+ +GK + + F EM+ C+P++ TY AL+N
Sbjct: 115 RGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 174
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPD 317
F + G + E F +++ G++P+V +Y+ L++A+ + +G P+
Sbjct: 175 FCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 234
Query: 318 RASYNIMVDAYGRAG 332
+Y ++DAY + G
Sbjct: 235 EYTYTSLIDAYCKIG 249
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ +G+ + E+ D C P TY L+ +C G L K FREM++ G
Sbjct: 136 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNG 195
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ +D K G Q+A++ + M+R P+ TYT +I+ Y K A
Sbjct: 196 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAF 255
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLC-----EEAEEIFEQLQGAGIEPDVYAYNA 299
+L NEM + N+ TYTAL+ +GLC E + +++ I+ V +
Sbjct: 256 RLANEMLQVGVEWNVVTYTALI-----DGLCGWENPTEGLHLLDEMVELDIKVTVVTFCV 310
Query: 300 LMEAY---RLISRM---------HMGCEPDRASYNIMVDA 327
L++ +L+S+ G + + A Y M+D
Sbjct: 311 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDG 350
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + L G++E+A F +M+++ + P N + K G
Sbjct: 21 CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M +P+ TY +MI+ K A LF EM+ P+ TY ++++ F
Sbjct: 81 RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDR 318
+ G ++ FE+++ EPDV YNAL+ + ++ G E P+
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200
Query: 319 ASYNIMVDAYGRAGL 333
SY+ +VDA+ + G+
Sbjct: 201 VSYSTLVDAFCKEGM 215
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 7/203 (3%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
L++ +W+ + + + L + LH E L++ T T+ +L+ C
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIK-----VTVVTFCVLIDGLC 316
Query: 166 MSGLLEKAEAVF-REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
+ L+ KA F R +GL +A +Y + IDGL KG + A +F++M + P
Sbjct: 317 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDR 376
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
YT +++ K AL L ++M K ++ YT+LV + ++A E+
Sbjct: 377 TAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 436
Query: 285 LQGAGIEPD-VYAYNALMEAYRL 306
+ G GI PD V + L + Y L
Sbjct: 437 MIGEGIHPDEVLCISVLKKHYEL 459
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C P + + ++ A++ F++M+ + P + L++ FA+ G +
Sbjct: 18 RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM---------EAYR-LISRMHM-GCEPDRASYNIMV 325
+ F+ + GAG +P V+ YN ++ EA R L M G PD +YN M+
Sbjct: 78 GVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMI 137
Query: 326 DAYGRAG 332
D +G+ G
Sbjct: 138 DGFGKVG 144
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ A G+ ++A + +L+ P TY LL+ A+ G L+ A +F EM++
Sbjct: 140 FLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRR 199
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS V YN +D L G A ++F +M D C P + TY+ ++N GK+ + A
Sbjct: 200 GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEA 259
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+F EM ++ Y +L+ A+ G + ++ +++ G PD +++N +M+A
Sbjct: 260 HKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA 319
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ +RM GC+PD SYNI++D+Y R G
Sbjct: 320 LGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFG 359
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 80 NTIWDAFDSL---------PPTHA---TWDDLINVSVQLRLNKKWDPIVLMSC-----VS 122
N DAFD P HA D L+N R + +V C
Sbjct: 44 NKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAY 103
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI +G+ A + E+ P E TY L+ A +G +++A + F M +
Sbjct: 104 NVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLE 163
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ YN +D K G A+ +F MKR QPS TY ++++ A +
Sbjct: 164 RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGA 223
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A KLF++M C P+ TY+ LVN + G EEA ++F ++ G+ D+ YN+L+
Sbjct: 224 ARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLA 283
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
++L+ M G PD S+N ++DA G+A
Sbjct: 284 TLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKA 323
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ SG +E+A VFREM G+ V YNS + L K GN +
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ + M R P ++ +++ GKA+K A ++F M CKP++ +Y L++++
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
AR G +A ++ E++ AG P+ YN+L+ EA+ ++ M GC PD
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415
Query: 319 ASYNIMVDAYGRAG 332
+YN ++D G+ G
Sbjct: 416 VTYNRLMDMLGKRG 429
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G+ ++A + E++D Y LL +G +++ + +EM + G
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG 305
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P A +N+ +D L K P A E+F RM C+P +Y ++I+ Y + + A
Sbjct: 306 FHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQAR 365
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
++ EM P TY +L++ A +G +EA + E+++ AG PDV YN LM+
Sbjct: 366 QMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDML 425
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDA 327
A RL +M G EPD SY + +D
Sbjct: 426 GKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDG 459
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ LI AYG+ + A + + C PT + L+ SG E+AE V++++ +
Sbjct: 34 VKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQ 93
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G YN I + G A+E+F+ MK +P TY ++N GKA +
Sbjct: 94 KGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQE 153
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A F+ M PNI TY L++AF + G + A +F +++ G +P V YN L++
Sbjct: 154 ARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLD 213
Query: 303 AY----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
A +L +M GC PD +Y+ +V+ G++G
Sbjct: 214 ALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSG 254
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T L+ AY A +F + + P+ + ID L+ G ++A ++++
Sbjct: 31 NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+ + CQ Y ++I +G++ + A+++F EM+ +P+ TY LVNA + G
Sbjct: 91 LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F+ + G+ P++ YN LM+A+R + ++ M G +P +YNI
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210
Query: 324 MVDAYGRAG 332
++DA AG
Sbjct: 211 LLDALCSAG 219
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++A G+ + A + +++S C P +Y +L+ +Y G +A + EM + G
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YNS I L G +A + + M+ C+P TY ++++ GK ++ A
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAA 435
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF +M+ +P+ +Y ++ A + +EA +F+ ++
Sbjct: 436 RLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA----------------- 478
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
+GC D+A Y I++ A RAG E +E +KH
Sbjct: 479 -------VGCPVDKAMYRILIRAAHRAGDTE-------LEAQLKH 509
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++Y + +A E++++ IP TY L+ G +++A AV EM
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN +D L K G Q+A +FQ+MK +P T +Y + I+ + A
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
L LF +M++ C + Y L+ A R G E ++ + Q +E + + A
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVESRLTSQKA 525
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G+L+ E + +EM G P I +G A ++F + + C P+ +
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T +I++ + + A ++ ++ C+ + Y L+ F R G + A E+F +++
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 288 AGIEPDVYAY----NALMEAYRLI-------SRMHMGCEPDRASYNIMVDAYGRAG 332
G EPD Y Y NAL +A R+ + + G P+ +YN+++DA+ + G
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + G+ ++A + E+ + C P+ Y ++ YC +G +E A V ++M
Sbjct: 124 ILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDK 183
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P NS I + + G + A EIF+RMK+ +T ++ M++ GKA K +A
Sbjct: 184 NLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLA 243
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EM + KPN T+ L+N R EA ++ ++++ AG+ PDV+ Y ++EA
Sbjct: 244 YQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEA 303
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
+ M GC + +YN+++DA +AG ++
Sbjct: 304 FAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQ 346
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
VS +I AYG+ S K + EL P TY ++++ +G + A +M
Sbjct: 16 VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKM 75
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
K GL P ++YN +DGL K +A ++F MK C TY ++I G+ +
Sbjct: 76 IKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRD 135
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A LF+EM C P+ YT +++ + + G E A + +++ + PD Y N+L
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195
Query: 301 MEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ A R + CE + S+N M+D G+AG
Sbjct: 196 ITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAG 238
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ P+++ +N+ I+ L + +A ++ Q M+ P TYT MI + KA
Sbjct: 249 EMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAG 308
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A ++F +M C N+ TY L++A + G ++A +I+ ++ GI PD
Sbjct: 309 NMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITAT 368
Query: 299 ALME 302
L +
Sbjct: 369 VLQQ 372
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ +++ +++R I P T+ L+ + +A V +EMR GL P Y I+
Sbjct: 244 YQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEA 303
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K GN KA E+F M++ C + TY L+I+ KA + A ++ +M+ P+
Sbjct: 304 FAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPD 363
Query: 259 ICTYTAL 265
T T L
Sbjct: 364 AITATVL 370
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+V N+ I + K ++ FQ + + +P+ TY +I KA +A+ ++
Sbjct: 15 LVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDK 74
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M +P+ Y +++ + + +EA ++F ++ G D Y Y L+
Sbjct: 75 MIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKR 134
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA L M GC P +Y ++D Y +AG E
Sbjct: 135 DEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIE 171
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A E+ + P TY +++A+ +G + KA +F +M K G
Sbjct: 265 LINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAG 324
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN ID L+K G Q A +I+ MK+ P T T++ L GK S ++L
Sbjct: 325 CSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKLSGISL 384
Query: 245 KLFNEMR 251
NE R
Sbjct: 385 D-ENEQR 390
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME--- 302
+ ++ C+ ++ A++ A+ R + + F++L G +P+ Y Y +++
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLV 60
Query: 303 -------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
A + +M G EPD YN+++D G+A + + C
Sbjct: 61 KAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEAC 104
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +++ C G +E A +F EM+ GL P V YNS IDG K G V
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ MK CC+P TY +IN + K K + L+ + EM+ + KPN+ +Y+ LV+AF +
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG+ ++A + + ++ G+ P+ Y Y +L+ +A+RL + M +G E + +
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 321 YNIMVDA 327
Y ++D
Sbjct: 440 YTALIDG 446
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ +G+ + E+ D C P TY L+ +C G L +REM+ G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ +D K G Q+A++ + M+R P+ TYT +I+ K A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L NEM + N+ TYTAL++ +EAEE+F ++ AG+ P++ +YNAL+ +
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P + LL + G + + F++M G P+ YN ID + K G+ + A
Sbjct: 222 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 281
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ MK P T TY MI+ +GK + + F EM+ C+P++ TY AL+N
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPD 317
F + G E + +++G G++P+V +Y+ L++A+ + +G P+
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Query: 318 RASYNIMVDAYGRAG 332
+Y ++DA + G
Sbjct: 402 EYTYTSLIDANCKIG 416
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ L+ A+C G++++A + +MR+ GL P+ Y S ID K GN A +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + + + TYT +I+ A + A +LF +M + PN+ +Y AL++ F +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL---------MEAYRLI--SRMHMGCEPDRAS 320
+ A E+ +L+G GI+PD+ Y +EA +++ G + +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 321 YNIMVDAYGRAG 332
Y ++DAY ++G
Sbjct: 545 YTTLMDAYFKSG 556
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + L G+LE+A F +M+++ + P N + K G
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M +P+ TY +MI+ K A LF EM+ P+ TY ++++ F
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDR 318
+ G ++ FE+++ EPDV YNAL+ + ++ +G E P+
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 319 ASYNIMVDAYGRAGLHE 335
SY+ +VDA+ + G+ +
Sbjct: 368 VSYSTLVDAFCKEGMMQ 384
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ ++ + ++A Y+++ +P E TY L+ A C G L A + EM + G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + IDGL ++A E+F +M P+ +Y +I+ + KA AL
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L NE++ KP++ Y + E A+ + +++ GI+ + Y LM+AY
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 305 ----RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+H+ E + V + L +G C LV +V ++
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTF--CVLIDGLCKNKLVSKAVDYF 600
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
L++ +W+ + + LI+ K+AE + ++ + IP +Y L+ +
Sbjct: 429 LQVGVEWNVVTYTA-----LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
+ +++A + E++ G+ P ++Y ++I GL + A + MK + ++
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
YT +++ Y K+ L L +EM+ + + T+ L++ + L +A + F ++
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 286 QGA-GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++ + + A+++ A L +M G PDR +Y ++D + G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVF-REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
T+ +L+ C + L+ KA F R +GL +A ++ + IDGL K + A +F++
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + P YT +++ K AL L ++M K ++ YT+LV +
Sbjct: 639 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 275 CEEAEEIFEQLQGAGIEPD-VYAYNALMEAYRL 306
++A E++ G GI PD V + L + Y L
Sbjct: 699 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYEL 731
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C P + + ++ A++ F++M+ + P + L++ FA+ G +
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM---------EAYR-LISRMHM-GCEPDRASYNIMV 325
+ + F+ + GAG P V+ YN ++ EA R L M G PD +YN M+
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 326 DAYGRAG 332
D +G+ G
Sbjct: 305 DGFGKVG 311
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + G+ ++A + E+ + C P+ Y ++ YC +G +E A V ++M
Sbjct: 124 ILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDK 183
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P NS I + + G + A EIF+RMK+ +T ++ M++ GKA K +A
Sbjct: 184 NLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLA 243
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EM + KPN T+ L+N R EA ++ ++++ AG+ PDV+ Y ++EA
Sbjct: 244 YQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEA 303
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
+ M GC + +YN+++DA +AG ++
Sbjct: 304 FAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQ 346
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
VS +I AYG+ S K + EL P TY ++++ +G + A + +M
Sbjct: 16 VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKM 75
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
K GL P ++ N +DGL K +A ++F MK C TY ++I G+ +
Sbjct: 76 IKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRD 135
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A LF+EM C P+ YT +++ + + G E A + +++ + PD Y N+L
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195
Query: 301 MEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ A R + CE + S+N M+D G+AG
Sbjct: 196 ITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAG 238
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ P+++ +N+ I+ L + +A ++ Q M+ P TYT MI + KA
Sbjct: 249 EMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAG 308
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A ++F +M C N+ TY L++A + G ++A +I+ ++ GI PD
Sbjct: 309 NMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITAT 368
Query: 299 ALME 302
L +
Sbjct: 369 VLQQ 372
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ +++ +++R I P T+ L+ + +A V +EMR GL P Y I+
Sbjct: 244 YQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEA 303
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K GN KA E+F M++ C + TY L+I+ KA + A ++ +M+ P+
Sbjct: 304 FAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPD 363
Query: 259 ICTYTAL 265
T T L
Sbjct: 364 AITATVL 370
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A E+ + P TY +++A+ +G + KA +F +M K G
Sbjct: 265 LINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAG 324
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN ID L+K G Q A +I+ MK+ P T T++ L GK S ++L
Sbjct: 325 CSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCKLSGISL 384
Query: 245 KLFNEMRSHKCKP 257
NE R P
Sbjct: 385 D-ENEQRPSPSSP 396
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+V N+ I + K ++ FQ + + +P+ TY +I KA +A++L ++
Sbjct: 15 LVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDK 74
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M +P+ +++ + + +EA ++F ++ G D Y Y L+
Sbjct: 75 MIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKR 134
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA L M GC P +Y ++D Y +AG E
Sbjct: 135 DEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIE 171
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 24/109 (22%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I YG++S+ + F E+ H KPN TY ++ + + G A E+ +++ G
Sbjct: 20 VIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTG 79
Query: 290 IEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKC 338
+EPD + C N+++D G+A + + C
Sbjct: 80 LEPDT-----------------LLC-------NVVLDGLGKANMMDEAC 104
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 14/236 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ G+ A + + RC+P TY+ L+ + G +E+A F G
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ VY+S ID K G +A+E+F+ M+R C P+ TY +++ KA + +A
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL EM C P++ TY L++ + G+ +EAE F++++ GI PDV + +L+E+
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRAG-LHEGKCSYSLVELSVK 348
+ ++ CE P +YN+++D GRAG +HE + E+ VK
Sbjct: 959 GKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFH--EMKVK 1012
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ +P TY LL SG LE+A +F +M + G P V Y S +D L KGG
Sbjct: 731 NQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLS 790
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ IF+ M + C P TY+ +I+ GK + A F S C PN+ Y++L+
Sbjct: 791 HALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLI 850
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCE 315
++F ++G+ + A E+FE++Q P++ YN L+ A +L+ M +GC
Sbjct: 851 DSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCV 910
Query: 316 PDRASYNIMVDAYGRAGLHEGKCSY 340
PD +YNI++D G+ G+ + SY
Sbjct: 911 PDLVTYNILIDGVGKMGMVDEAESY 935
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ + Y +L+ G A VF ++ ++ + P A + ++ + G A
Sbjct: 248 CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAA 307
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E Q M + P T+T++I+ K+ A K FN M++ +C PN+ TYT LVN
Sbjct: 308 EPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGL 367
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDR 318
A+ G EEA E+F +++ PD AYN L++ M C P+
Sbjct: 368 AKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNL 427
Query: 319 ASYNIMVDAYGRAG 332
+YNIM+ G+AG
Sbjct: 428 RTYNIMISVLGKAG 441
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S P T+ +L+ A SG +++A F M+ P+ V Y + ++GL K G
Sbjct: 312 EMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAG 371
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A E+F MK + C P Y +I+ GKA ++ MA LF EM+ PN+ TY
Sbjct: 372 RLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYN 431
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ + G EA ++F L+ G PDV+ YN L++
Sbjct: 432 IMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 114/219 (52%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ ++ ++ +++ + E++ C+ TY+L++ C S +++A VF M++ G
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + + L+K A++IF ++ P T Y +M+N K+++ A
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEAC 723
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
KL + M++ P++ TYT+L++ + G EEA +F ++ G EPDV AY +LM+
Sbjct: 724 KLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVL 783
Query: 303 ------AYRLISRMHMG---CEPDRASYNIMVDAYGRAG 332
++ LI M C PD +Y+ ++D+ G+ G
Sbjct: 784 GKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 83/169 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+++G+K + +A + E+ +C P TY LL +G L AE + EM K G
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN IDG+ K G +A F+RMK P T+T +I GK K A
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEAC 968
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+LF+ M P++ TY L++ R G EA IF +++ G PD
Sbjct: 969 ELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 135 HKKAEFTYLELLDS-RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
H LE++ CIPT TY L+ +G L++A ++ REM K G PS V Y+
Sbjct: 543 HVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYS 602
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S + K ++++ +F M R C TY+L+IN K+ AL +F M+
Sbjct: 603 SLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
+P + Y L+++ ++ + A +IF +LQ + + PD + YN ++ EA
Sbjct: 663 GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ M + PD +Y ++D G++G
Sbjct: 723 CKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 42/226 (18%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P TY L+ +G LE+A VF EM++ P A+ YN+ IDGL K G A
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ MK P+ TY +MI++ GKA + A +LF++++ P++ TY L++
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471
Query: 269 FAREGLCEEAEEIFEQL------------QGAGIEPDV-------------------YAY 297
+ G ++ I +++ AG E + Y
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531
Query: 298 NALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
N LM EA +L+ M C P +Y +VD G+AG
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY L+ A+ +G +++A + M+K+ P+ V Y + +DGL K G +AV + +
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M++ C+PS TY+ ++ + K + +L LF+EM C ++ TY+ ++N +
Sbjct: 588 EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD 647
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYN 322
++A ++F +++ G+EP + Y L+ + ++ + PD YN
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707
Query: 323 IMVDAYGRAGLHEGKC 338
IMV+ ++ + C
Sbjct: 708 IMVNGLVKSNRVDEAC 723
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 42/244 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ G+ A + E+ D +P TY +++ +G +A +F ++++ G
Sbjct: 398 LIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQG 457
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM------------------------KRDCC 220
P YN+ ID L KGG K + I + M R
Sbjct: 458 AVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVE 517
Query: 221 QPSTETYTLMINLYGKASKSFM-------ALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
PS +L Y +F+ A+KL M+ H+C P + TYT LV+ + G
Sbjct: 518 YPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
+EA + +++ G EP V Y++LM E+ L M GC D ++Y+
Sbjct: 578 RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637
Query: 323 IMVD 326
++++
Sbjct: 638 LVIN 641
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 21/255 (8%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLH-KKAEFTYLELLDSRCIPTE 154
WD + ++ RL K +P ++ V QK LH K FT+ D T
Sbjct: 132 WDAEMGKQLE-RLKFKLNPGLVCDVV-------VNQKDLHLAKCFFTWAGQQDGYS-HTV 182
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY L++K + + + M K G S + S + N A+EIF +
Sbjct: 183 GTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQ 242
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK C PST Y ++ L K A+ +F ++ + +P+ T+ V++F R G
Sbjct: 243 MKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNI 323
+ A E +++ +GI+P V+ + L+ EA + + M ++ C P+ +Y
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362
Query: 324 MVDAYGRAGLHEGKC 338
+V+ +AG E C
Sbjct: 363 LVNGLAKAGRLEEAC 377
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 90 PPTHATWDDLIN-VSVQLRLN---KKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEF 140
PP T+++L++ ++ RLN K + + + CV L LI+ G+ + +AE
Sbjct: 875 PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ + + +P T+ L+++ L +A +F M + G PS V YN ID L
Sbjct: 935 YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILG 994
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
+ G +A IF MK C P T +M + + F AL+
Sbjct: 995 RAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALE 1039
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ YG+ L ++ L L+ + + P TY L+ A M G +A AV++ M
Sbjct: 286 LIDVYGKMGLWEQG-IKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDE 344
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+A YN+ I K G K +E+FQ M C+ S TY+ +I+ KA + +A
Sbjct: 345 GYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELA 404
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+LFNEM C PN TY +L+ A A+ E+A E+FEQ+Q G PDV + AL+ +
Sbjct: 405 LELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISS 464
Query: 304 YRLIS--RMHMG---------CEPDRASYNIMVDAYGRAGL 333
Y R +G C+PD +N ++D G+
Sbjct: 465 YEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETGV 505
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY + P TY L+ Y GL E+ V M+ G+ P YN+ I
Sbjct: 267 TYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACN 326
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G P++A+ +++RM + P+ TY +I+ YGKA + +++F EM C+ ++
Sbjct: 327 MCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVI 386
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
TY++L++A + G E A E+F ++ G G P+ YN+L+ +A + +M
Sbjct: 387 TYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQM 446
Query: 311 HM-GCEPDRASYNIMVDAYGRAG 332
GC PD ++ ++ +Y + G
Sbjct: 447 QKGGCTPDVVTFTALISSYEKGG 469
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ +++A + +EMR + + Y + ++ +K GN A++ + M
Sbjct: 212 TYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHM 271
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++D P+ TY +I++YGK +K+ M++ +P + TY L+ A G
Sbjct: 272 RQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQP 331
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
EA +++++ G P+ YNAL+ AY ++ H GCE +Y+ +
Sbjct: 332 REAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSL 391
Query: 325 VDAYGRAGLHE 335
+ A +AG E
Sbjct: 392 ISACEKAGQWE 402
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 17/124 (13%)
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCK---PNIC---TYTALVNAFAREGLCEEAEEIF 282
L++ KA F A+++F +R+ ++C TYTA+++ + + A ++
Sbjct: 174 LLLKDLSKAGLGFRAVEIFEWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVDRAMDLA 233
Query: 283 EQLQGAGIEPDVYAYNALMEA--------YRLISRMHM---GCEPDRASYNIMVDAYGRA 331
++++ IE +V+ Y ALM L + HM G P+ +YN ++D YG+
Sbjct: 234 KEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKM 293
Query: 332 GLHE 335
GL E
Sbjct: 294 GLWE 297
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +++ C G +E A +F EM+ GL P V YNS IDG K G V
Sbjct: 128 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 187
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ MK CC+P TY +IN + K K + L+ + EM+ + KPN+ +Y+ LV+AF +
Sbjct: 188 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 247
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG+ ++A + + ++ G+ P+ Y Y +L+ +A+RL + M +G E + +
Sbjct: 248 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 307
Query: 321 YNIMVDA 327
Y ++D
Sbjct: 308 YTALIDG 314
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ +G+ + E+ D C P TY L+ +C G L +REM+ G
Sbjct: 171 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 230
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ +D K G Q+A++ + M+R P+ TYT +I+ K A
Sbjct: 231 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 290
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L NEM + N+ TYTAL++ +EAEE+F ++ AG+ P++ +YNAL+ +
Sbjct: 291 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 350
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P + LL + G + + F++M G P+ YN ID + K G+ + A
Sbjct: 90 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 149
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ MK P T TY MI+ +GK + + F EM+ C+P++ TY AL+N
Sbjct: 150 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 209
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPD 317
F + G E + +++G G++P+V +Y+ L++A+ + +G P+
Sbjct: 210 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 269
Query: 318 RASYNIMVDAYGRAG 332
+Y ++DA + G
Sbjct: 270 EYTYTSLIDANCKIG 284
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ + P +Y+ L+ A+C G++++A + +MR+ GL P+ Y S ID K
Sbjct: 223 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 282
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN A + M + + + TYT +I+ A + A +LF +M + PN+ +
Sbjct: 283 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 342
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---------MEAYRLI--SRM 310
Y AL++ F + + A E+ +L+G GI+PD+ Y +EA +++
Sbjct: 343 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 402
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G + + Y ++DAY ++G
Sbjct: 403 ECGIKANSLIYTTLMDAYFKSG 424
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + L G+LE+A F +M+++ + P N + K G
Sbjct: 56 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 115
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M +P+ TY +MI+ K A LF EM+ P+ TY ++++ F
Sbjct: 116 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 175
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDR 318
+ G ++ FE+++ EPDV YNAL+ + ++ +G E P+
Sbjct: 176 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 235
Query: 319 ASYNIMVDAYGRAGLHE 335
SY+ +VDA+ + G+ +
Sbjct: 236 VSYSTLVDAFCKEGMMQ 252
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ ++ + ++A Y+++ +P E TY L+ A C G L A + EM + G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + IDGL ++A E+F +M P+ +Y +I+ + KA AL
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L NE++ KP++ Y + E A+ + +++ GI+ + Y LM+AY
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
L++ +W+ + + LI+ K+AE + ++ + IP +Y L+ +
Sbjct: 297 LQVGVEWNVVTYTA-----LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 351
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
+ +++A + E++ G+ P ++Y ++I GL + A + MK + ++
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
YT +++ Y K+ L L +EM+ + + T+ L++ + L +A + F ++
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471
Query: 286 QGA-GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++ + + A+++ A L +M G PDR +Y ++D + G
Sbjct: 472 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 530
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
T+ +L+ C + L+ KA F + +GL +A ++ + IDGL K + A +F++
Sbjct: 447 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 506
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + P YT +++ K AL L ++M K ++ YT+LV +
Sbjct: 507 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 566
Query: 275 CEEAEEIFEQLQGAGIEPD-VYAYNALMEAYRL 306
++A E++ G GI PD V + L + Y L
Sbjct: 567 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYEL 599
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C P + + ++ A++ F++M+ + P + L++ FA+ G +
Sbjct: 53 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 112
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM---------EAYR-LISRMHM-GCEPDRASYNIMV 325
+ + F+ + GAG P V+ YN ++ EA R L M G PD +YN M+
Sbjct: 113 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 172
Query: 326 DAYGRAG 332
D +G+ G
Sbjct: 173 DGFGKVG 179
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC+P TY L+ YC + ++E A +F +M K G+PP+ V N+ +DG+ K G A
Sbjct: 411 RCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGA 470
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
VE F M+ + + TYT +I + + A++LF+EM C P+ Y L++
Sbjct: 471 VEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISG 530
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
++ G + A + +++ AG PD+ ++N L+ EAY ++ M + G +PD
Sbjct: 531 LSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPD 590
Query: 318 RASYNIMVDAYGRAG 332
+YN ++ + + G
Sbjct: 591 GVTYNTLISHFSKTG 605
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 12/187 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++A+C +EKA +F EM + G P A+VY + I GL + G +A + +M
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P ++ ++IN + + +K A ++ EM + KP+ TY L++ F++ G
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDF 607
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE------------PDRASYNI 323
A + +++ G+ P V Y AL+ AY L + + P+ YNI
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667
Query: 324 MVDAYGR 330
++++ R
Sbjct: 668 LINSLCR 674
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + +KA + E+L++ C P Y L+ +G L++A V +M++ G
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V +N I+G + +A E+ + M+ +P TY +I+ + K A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALME- 302
+L +M P + TY AL++A+ G +EA +IF + + P+ YN L+
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINS 671
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIM 324
A L+ M + G +P+ ++N M
Sbjct: 672 LCRKNQVDLALSLMDDMKVKGVKPNTNTFNAM 703
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +K+ +A E+ ++ P TY L+ + +G A + ++M K
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE 620
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFM 242
GL P+ V Y + I GN +A++IF+ M P+T Y ++IN + ++ +
Sbjct: 621 GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL L ++M+ KPN T+ A+ + +A E+ +++ PD L E
Sbjct: 681 ALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTE 740
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAV 209
+PT TY L+ AYC++G L++A +FR+M +PP+ V+YN I+ L + A+
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLAL 682
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVN 267
+ MK +P+T T+ M G K+++ A +L + M H C P+ T L
Sbjct: 683 SLMDDMKVKGVKPNTNTFNAMFK--GLQEKNWLSKAFELMDRMTEHACNPDYITMEILTE 740
Query: 268 AFAREG 273
+ G
Sbjct: 741 WLSAVG 746
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 41/185 (22%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ C SG ++A V + K G A N+ + L + ++ + MK
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335
Query: 220 CQPSTETYTLMIN-----------------LYGKASKSFM-------------------- 242
QP+ T+ ++IN + G S F+
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395
Query: 243 ---ALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
L L MRS +C PN TY L++ + + + E A E+F+Q+ G+ P+V N
Sbjct: 396 QEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455
Query: 299 ALMEA 303
L++
Sbjct: 456 TLVDG 460
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 12/208 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H KA + E++D C P T+A+LL+ C S LEKA + M++ G P +YN+
Sbjct: 23 HDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNA 82
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I G K + +A + M ++ C P+ TYT +++ KA ++ A+KL +EMR
Sbjct: 83 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG 142
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
C PNI TY +V E +EA+++ E++ G PDV YN+ + EA
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 202
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ ++RM + PD SY +++ ++G
Sbjct: 203 KFLARMPV--TPDVVSYTTVINGLCKSG 228
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ D C P TY ++++ C L++A+ + EM G P V YNS+I GL K
Sbjct: 137 EMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCD 196
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A + RM P +YT +IN K+ A ++ + M + C P++ TY+
Sbjct: 197 RVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYS 253
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHM 312
+L++ F + G E A + + + G P++ AYN+L+ A L+
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 313
Query: 313 GCEPDRASYNIMVDAYGRA 331
G PD SYN +D +A
Sbjct: 314 GFTPDVVSYNACIDGLCKA 332
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ +C G +E+A + M K G P+ V YNS + L + G+ KA
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 304
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN----------I 259
++ M+R P +Y I+ KA + A +F+ M C PN I
Sbjct: 305 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDI 364
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGI-EPDVYAYNALMEAY 304
YT L++ + G +EA +F ++ I EPDV+ YN +++++
Sbjct: 365 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 22/199 (11%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ C SG L+ A + M G P V Y+S IDG KGG ++A+ +
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + C+P+ Y ++ + A + EM P++ +Y A ++ +
Sbjct: 272 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------------------EAYRLISRM- 310
++A+ +F+++ G P+ +Y+ L+ EA L S++
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391
Query: 311 -HMGCEPDRASYNIMVDAY 328
CEPD YN+M+D++
Sbjct: 392 DEKICEPDVFFYNVMLDSH 410
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 23/211 (10%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA------- 189
KAE +E+ P +Y + C + ++KA+AVF M + G P+A
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361
Query: 190 ---VVYNSYIDGLLKGGNPQKAVEIFQR-MKRDCCQPSTETYTLMINLYGKASKSFMALK 245
++Y +DGL KGG +A +F + + C+P Y +M++ + K + AL+
Sbjct: 362 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ 421
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
+ +M C N+ T+ LV+ + +AE + + G PD Y L++A
Sbjct: 422 IHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 480
Query: 306 LISR-----------MHMGCEPDRASYNIMV 325
+ + GC PD +Y+ ++
Sbjct: 481 KCGKSAAALELFEEAVKGGCVPDVVTYSALI 511
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 45/219 (20%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALL----------LKAYCMSGLLEKAEAVFREMRKYGL 185
KKA+ + +++ C P +Y++L L C G ++A A+F ++ +
Sbjct: 336 KKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 395
Query: 186 -PPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQ---------------------- 221
P YN +D K KA++I ++M +++CC
Sbjct: 396 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAET 455
Query: 222 -----------PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
P TY +++ K KS AL+LF E C P++ TY+AL+
Sbjct: 456 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 515
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
E + EEA +F +L PD L +L+++
Sbjct: 516 HENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNK 554
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ + ++ P TY L+ +CM+ ++ A + EM G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + YN+ IDGL K G +A +F MK C P TY+ +I + K + MA
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
LF++M P++ T++ LV + GL ++AE + E++ + PDVY Y +L
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556
Query: 301 ------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+EA R++ RM GC+P+ +Y ++DA+ RAG + +Y L+E
Sbjct: 557 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG--KPTVAYRLLE 605
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + +++ A + +++++ C+P TY LL C +GL+++A + EMR+ G
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y++ + GL K G A+++F+ C P Y+ +I KA + A
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEAC 321
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR------------------------------EGL 274
KLF +MR + C+P++ T+TAL++ + +GL
Sbjct: 322 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 381
Query: 275 CE-----EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
C+ +A+E+F+++ GIEP+V YN+L+ + + + + GC PD
Sbjct: 382 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 441
Query: 319 ASYNIMVDAYGRAG 332
+YN ++D + G
Sbjct: 442 ITYNTLIDGLCKTG 455
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + ++L +P T++ L++ YC +GL++ AE + EM P Y S +D
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G +A + +RM + CQP+ TYT +I+ + +A K +A +L EM + +P
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQP 614
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TY +L+ F G EEA +I E+L+ + D++AY +M+ RM E
Sbjct: 615 NVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALE 673
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ +C ++ A +F +M K + P V +++ ++G G A
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M C P TYT +++ + K + A ++ M C+PN+ TYTAL++AF
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM--GCEPD 317
R G A + E++ G G++P+V Y +L+ EA +++ R+ C+ D
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKAD 651
Query: 318 RASYNIMVDAYGRAG 332
+Y +M+D R G
Sbjct: 652 MFAYRVMMDGLCRTG 666
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ +++ C + L +A F +M+K G P+ YN I+G K +A + + M
Sbjct: 128 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 187
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P+ TY+ +I+ + + +K A KLF +M + C PN+ TY L++ R GL
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIM 324
+EA E+ ++++ G++PD ++Y+ LM ++ M C PD +Y+ +
Sbjct: 248 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 307
Query: 325 VDAYGRAGLHEGKC 338
+ +AG + C
Sbjct: 308 IAGLCKAGRLDEAC 321
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ ++ C P T+ L+ C L++A+ V M P+ + Y+S IDGL K
Sbjct: 324 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 383
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + A E+F+RM +P+ TY +I+ + + AL L EM + C P+I T
Sbjct: 384 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 443
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--------- 312
Y L++ + G EA +F ++ PDV Y+ L+ + + R+ M
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 503
Query: 313 --GCEPDRASYNIMVDAYGRAGL 333
PD +++ +V+ Y AGL
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGL 526
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + +A E+ +S P TY+ ++ +C ++ A +FR+M +
Sbjct: 166 VLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN 225
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN+ + GL + G +A E+ M+ QP +Y ++ K K MA
Sbjct: 226 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 285
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LK+F + + C P++ Y+ L+ + G +EA ++FE+++ EPDV + ALM
Sbjct: 286 LKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG 345
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA +++ M C P+ +Y+ ++D + G
Sbjct: 346 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 14/195 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TYA++++ C SG L+KA + EMR+ G P A +YN I L K N KA++
Sbjct: 57 PNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY 116
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ C+ + T+T+MI+ KA++ A F +M+ PN TY L+N F +
Sbjct: 117 FRSME---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
A + ++++ +G+ P+V Y+ ++ AY+L +M GC P+ +
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ R GL +
Sbjct: 234 YNTLLSGLCRNGLMD 248
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y+ L+ C +G L++A +F +MR+ P V + + +DGL KG Q+A
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ + M+ C P+ TY+ +I+ K + A ++F M +PN+ TY +L++ F
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDR 318
+ A + E++ G PD+ YN L+ EA RL M C PD
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476
Query: 319 ASYNIMVDAY 328
+Y+ ++ +
Sbjct: 477 ITYSCLIGGF 486
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 13/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E Y L AE E++ S C P TY L+ +C G + +A V + M K G
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + ID + G P A + + M + QP+ TY +I + A
Sbjct: 577 CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 636
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
K+ + R CK ++ Y +++ R G A E+ E ++ +G P Y AL+
Sbjct: 637 KILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 696
Query: 302 --------EAYRLISRMHMG--CEPDRASYNIMVDAYGRAGLHE 335
+A ++ M + P+ +Y ++ R G HE
Sbjct: 697 LCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHE 740
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKY 183
LI+A+ + A E++ + P TY L+ +C +G LE+A + + R
Sbjct: 587 LIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDE 646
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
Y +DGL + G A+E+ + +K+ P + Y +I + + A
Sbjct: 647 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 706
Query: 244 LKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ EM S K +PN Y A++ AREG EEA + ++L G
Sbjct: 707 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 751
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 49/196 (25%)
Query: 181 RKYGLPPSAVVYNSYID-----------------------------------GLLKGGNP 205
++ G + YN + GL K G+
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
KA E+ + M+ P Y +I+ KA + AL F RS +C+ N+ T+T +
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF---RSMECEKNVITWTIM 132
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GC 314
++ + EA F +++ G P+ + YN L+ + + ++H G
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192
Query: 315 EPDRASYNIMVDAYGR 330
P+ +Y+ ++ + R
Sbjct: 193 APNVVTYSTVIHGFCR 208
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ + ++ P TY L+ +CM+ ++ A + EM G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + YN+ IDGL K G +A +F MK C P TY+ +I + K + MA
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
LF++M P++ T++ LV + GL ++AE + E++ + PDVY Y +L
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437
Query: 301 ------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+EA R++ RM GC+P+ +Y ++DA+ RAG + +Y L+E
Sbjct: 438 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG--KPTVAYKLLE 486
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + +++ A + +++++ C+P TY LL C +GL+++A + EMR+ G
Sbjct: 83 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 142
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y++ + GL K G A+++F+ C P Y+ +I K + A
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEAC 202
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR------------------------------EGL 274
KLF +MR + C+P++ T+TAL++ + +GL
Sbjct: 203 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262
Query: 275 CE-----EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
C+ +A+E+F+++ GIEP+V YN+L+ + + + + GC PD
Sbjct: 263 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 322
Query: 319 ASYNIMVDAYGRAG 332
+YN ++D + G
Sbjct: 323 ITYNTLIDGLCKTG 336
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + ++L +P T++ L++ YC +GL++ AE + EM P Y S +D
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G +A + +RM + CQP+ TYT +I+ + +A K +A KL EM + +P
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP 495
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TY +L+ F G EEA ++ E+L+ + D++AY +M+ RM E
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALE 554
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ +C ++ A +F +M K + P V +++ ++G G A
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M C P TYT +++ + K + A ++ M C+PN+ TYTAL++AF
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM--GCEPD 317
R G A ++ E++ G G++P+V Y +L+ EA +++ R+ C+ D
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKAD 532
Query: 318 RASYNIMVDAYGRAG 332
+Y +M+D R G
Sbjct: 533 MFAYRVMMDGLCRTG 547
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ +++ C + L +A F +M+K G P+ YN I+G K +A + + M
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P+ TY+ +I+ + + +K A KLF +M + C PN+ TY L++ R GL
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIM 324
+EA E+ ++++ G++PD ++Y+ LM ++ M C PD +Y+ +
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 325 VDAYGRAGLHEGKC 338
+ + G + C
Sbjct: 189 IAGLCKTGRLDEAC 202
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + +A E+ +S P TY+ ++ +C ++ A +FR+M +
Sbjct: 47 VLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN 106
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN+ + GL + G +A E+ M+ QP +Y ++ K K MA
Sbjct: 107 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 166
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LK+F + + C P++ Y+ L+ + G +EA ++FE+++ EPDV + ALM
Sbjct: 167 LKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDG 226
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA +++ M C P+ +Y+ ++D + G
Sbjct: 227 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 266
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ ++ C P T+ L+ C L++A+ V M P+ + Y+S IDGL K
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + A E+F+RM +P+ TY +I+ + + AL L EM + C P+I T
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--------- 312
Y L++ + G EA +F ++ PDV Y+ L+ + + R+ M
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384
Query: 313 --GCEPDRASYNIMVDAYGRAGL 333
PD +++ +V+ Y AGL
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGL 407
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y+ L+ C +G L++A +F +MR+ P V + + +DGL KG Q+A
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 237
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ + M+ C P+ TY+ +I+ K + A ++F M +PN+ TY +L++ F
Sbjct: 238 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDR 318
+ A + E++ G PD+ YN L+ EA RL M C PD
Sbjct: 298 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 357
Query: 319 ASYNIMVDAY 328
+Y+ ++ +
Sbjct: 358 ITYSCLIGGF 367
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 13/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E Y L AE E++ S C P TY L+ +C G + +A V + M K G
Sbjct: 398 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + ID + G P A ++ + M + QP+ TY +I + A
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 517
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
K+ + R CK ++ Y +++ R G A E+ E ++ +G P Y AL+
Sbjct: 518 KMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 577
Query: 302 --------EAYRLISRMHMG--CEPDRASYNIMVDAYGRAGLHE 335
+A ++ M + P+ +Y ++ R G HE
Sbjct: 578 LCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHE 621
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ + + IDGL K +A F +MK+ P+ TY ++IN + K K A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
EM+ PN+ TY+ +++ F R+ + A ++F Q+ G P++ YN L+
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EAY L+ M G +PD+ SY+ ++ + G
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG 161
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKY 183
LI+A+ + A E++ + P TY L+ +C +G LE+A + + R
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDE 527
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
Y +DGL + G A+E+ + +K+ P + Y +I + + A
Sbjct: 528 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 587
Query: 244 LKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ EM S K +PN Y A++ AREG EEA + ++L G
Sbjct: 588 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 632
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C+ + T+T+MI+ KA++ A F +M+ PN TY L+N F + A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 280 EIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAY 328
+ ++++ +G+ P+V Y+ ++ AY+L +M GC P+ +YN ++
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 329 GRAGLHE 335
R GL +
Sbjct: 123 CRNGLMD 129
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI AY +++A + +L + C PT TY ++L Y G+ K + M+
Sbjct: 226 LITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSS 285
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I +G ++A E+F+ MK P TY ++++YGK+ + A
Sbjct: 286 GVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREA 345
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ EM + P+I TY +L++A+AR+GL +EA E+ Q+ GI+PDV+ Y L+
Sbjct: 346 MEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSG 405
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ ++ M + GC+P+ ++N ++ +G G
Sbjct: 406 FEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRG 445
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ ++A E+ S P+ TY L+ AY GLL++A + +M K G
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + + G K G A+++F+ M+ CQP+ T+ +I ++G +
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMM 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F E++ +C P+I T+ L+ F + G+ E +F++++ AG P+ +N L+ AY
Sbjct: 452 KVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 511
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ RM G PD ++YN ++ A R GL E
Sbjct: 512 SRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWE 553
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + SL+++A + E+ + P + TY LL Y S +A V +EM G
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASG 356
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YNS I + G +A+E+ +M + +P TYT +++ + K K A+
Sbjct: 357 FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAM 416
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F EMR C+PNICT+ AL+ G E ++FE+++ PD+ +N L+
Sbjct: 417 KVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVF 476
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R ++N ++ AY R G +
Sbjct: 477 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFD 518
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D I + A+++ G A ++ ++R G+ Y S I G +
Sbjct: 178 DFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYR 237
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK-LFNEMRSHKCKPNICTYTAL 265
+AV +F++++ + C+P+ TY +++N+YGK + + L + M+S P++ TY L
Sbjct: 238 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTL 297
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GC 314
+++ R L EEA E+FE+++ AG PD YNAL++ Y ++ M G
Sbjct: 298 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGF 357
Query: 315 EPDRASYNIMVDAYGRAGL 333
P +YN ++ AY R GL
Sbjct: 358 APSIVTYNSLISAYARDGL 376
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 91 PTHATWDDLI----NVSVQLRLNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFT 141
P T++ LI N + + K ++ I + CV + L+ +GQ + +
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGV 488
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + +P DT+ L+ AY G ++A A++R M G+ P YN+ + L +
Sbjct: 489 FKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR 548
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG +++ ++ MK C+P+ TY +++ Y + L E+ S +P
Sbjct: 549 GGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVL 608
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH------- 311
LV +++ L E E F +L+ G PD+ NA++ Y R++S+ +
Sbjct: 609 LKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK 668
Query: 312 -MGCEPDRASYNIMVDAYGRA 331
G P +YN ++ Y R
Sbjct: 669 DSGFTPSLTTYNSLMYMYSRT 689
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 46/262 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC------------------- 165
++ A + L +++E E+ D RC P E TY LL AY
Sbjct: 542 VLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Query: 166 ----------------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
S LL + E F E+R+ G P N+ + + K
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI +K PS TY ++ +Y + + + E+ + KP+I ++ ++ A+
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS-----------RMHMGCEPDR 318
R G +EA IF +++ G+ PDV YN + +Y S + GC+P++
Sbjct: 722 CRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQ 781
Query: 319 ASYNIMVDAYGRAGLHEGKCSY 340
+YN ++D + + + S+
Sbjct: 782 NTYNSLIDWFCKLNRRDEASSF 803
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 6/187 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG++ + K + DS P+ TY L+ Y + EK+E + RE+ G
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + +N+ I + G ++A IF MK P TY I Y S A+
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAI 766
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M + CKPN TY +L++ F + +EA L+ ++P V E
Sbjct: 767 DVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLR--NLDPSVTKD----EER 820
Query: 305 RLISRMH 311
RL+ R++
Sbjct: 821 RLLERLN 827
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 85 AFDSLPPTHATWDDLINVSVQLR---LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
++SL +A D L++ +++L+ + K P V + E G+ K
Sbjct: 363 TYNSLISAYAR-DGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKV--- 418
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + C P T+ L+K + G + VF E++ P V +N+ + +
Sbjct: 419 FEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQ 478
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + +F+ MKR P +T+ +I+ Y + A+ ++ M P++ T
Sbjct: 479 NGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
Y A++ A AR GL E++E++ +++ +P+ Y +L+ AY
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 196 IDGLLKGGNPQKAVEI------FQRMKRDCCQP-STETYTLMINLYGKASKSFMALKLFN 248
I G++KG K E+ F R + D S ++I++ GK ++ A L +
Sbjct: 150 ILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLH 209
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
++R+ +I YT+L+ A+A G EA +F++L+ G P + YN ++ Y
Sbjct: 210 DLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG 269
Query: 305 -------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
L+ M G PD +YN ++ + R L+E
Sbjct: 270 MPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI AY +++A + +L + C PT TY ++L Y G+ K + M+
Sbjct: 226 LITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSS 285
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I +G ++A E+F+ MK P TY ++++YGK+ + A
Sbjct: 286 GVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREA 345
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ EM + P+I TY +L++A+AR+GL +EA E+ Q+ GI+PDV+ Y L+
Sbjct: 346 MEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSG 405
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ ++ M + GC+P+ ++N ++ +G G
Sbjct: 406 FEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRG 445
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ ++A E+ S P+ TY L+ AY GLL++A + +M K G
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + + G K G A+++F+ M+ CQP+ T+ +I ++G +
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMM 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F E++ +C P+I T+ L+ F + G+ E +F++++ AG P+ +N L+ AY
Sbjct: 452 KVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 511
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ RM G PD ++YN ++ A R GL E
Sbjct: 512 SRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWE 553
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + SL+++A + E+ + P + TY LL Y S +A V +EM G
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASG 356
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YNS I + G +A+E+ +M + +P TYT +++ + K K A+
Sbjct: 357 FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAM 416
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F EMR C+PNICT+ AL+ G E ++FE+++ PD+ +N L+
Sbjct: 417 KVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVF 476
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R ++N ++ AY R G +
Sbjct: 477 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFD 518
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D I + A+++ G A ++ ++R G+ Y S I G +
Sbjct: 178 DFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYR 237
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK-LFNEMRSHKCKPNICTYTAL 265
+AV +F++++ + C+P+ TY +++N+YGK + + L + M+S P++ TY L
Sbjct: 238 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTL 297
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GC 314
+++ R L EEA E+FE+++ AG PD YNAL++ Y ++ M G
Sbjct: 298 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGF 357
Query: 315 EPDRASYNIMVDAYGRAGL 333
P +YN ++ AY R GL
Sbjct: 358 APSIVTYNSLISAYARDGL 376
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 91 PTHATWDDLI----NVSVQLRLNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFT 141
P T++ LI N + + K ++ I + CV + L+ +GQ + +
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGV 488
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + +P DT+ L+ AY G ++A A++R M G+ P YN+ + L +
Sbjct: 489 FKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR 548
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG +++ ++ MK C+P+ TY +++ Y + L E+ S +P
Sbjct: 549 GGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVL 608
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH------- 311
LV +++ L E E F +L+ G PD+ NA++ Y R++S+ +
Sbjct: 609 LKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK 668
Query: 312 -MGCEPDRASYNIMVDAYGRA 331
G P +YN ++ Y R
Sbjct: 669 DSGFTPSLTTYNSLMYMYSRT 689
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A + L +++E E+ D RC P E TY LL AY +E+ A+ E+
Sbjct: 542 VLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P AV+ + + K + F ++ P T M+++YG+
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ N ++ P++ TY +L+ ++R E++E+I ++ G++PD+ ++N ++ AY
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYG 329
R+ + M G PD +YN + +Y
Sbjct: 722 CRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYA 757
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG++ + K + DS P+ TY L+ Y + EK+E + RE+ G
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + +N+ I + G ++A IF MK P TY I Y S A+
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAI 766
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M ++CKPN TY +L++ F + +EA L+ ++P V E
Sbjct: 767 DVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLR--NLDPSVTKD----EER 820
Query: 305 RLISRMH 311
RL+ R++
Sbjct: 821 RLLERLN 827
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 85 AFDSLPPTHATWDDLINVSVQLR---LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
++SL +A D L++ +++L+ + K P V + E G+ K
Sbjct: 363 TYNSLISAYAR-DGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKV--- 418
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + C P T+ L+K + G + VF E++ P V +N+ + +
Sbjct: 419 FEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQ 478
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + +F+ MKR P +T+ +I+ Y + A+ ++ M P++ T
Sbjct: 479 NGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
Y A++ A AR GL E++E++ +++ +P+ Y +L+ AY
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 85/185 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + L + E +LEL + P T ++ Y ++ K + ++ G
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS YNS + + + +K+ +I + + +P ++ +I Y + + A
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F EM+ P++ TY + ++A + + EA ++ + + +P+ YN+L++ +
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWF 791
Query: 305 RLISR 309
++R
Sbjct: 792 CKLNR 796
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 196 IDGLLKGGNPQKAVEI------FQRMKRDCCQP-STETYTLMINLYGKASKSFMALKLFN 248
I G++KG K E+ F R + D S ++I++ GK ++ A L +
Sbjct: 150 ILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLH 209
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
++R+ +I YT+L+ A+A G EA +F++L+ G P + YN ++ Y
Sbjct: 210 DLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG 269
Query: 305 -------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
L+ M G PD +YN ++ + R L+E
Sbjct: 270 MPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 13/238 (5%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+I++ Y + ++ A+F E++D P TY +L C G L +A +F++M
Sbjct: 307 NIIIDSLYKDRLVNDAADFLS-EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME 365
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ G P V YN+ ID L K A+E M P+ TY+ +++ + +
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD 425
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +LF EM PN T++ LV+ +EG+ EA +FE + G+EP++Y YNALM
Sbjct: 426 EATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALM 485
Query: 302 EAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
Y L +M+ GC PD SYNI+++ Y + + K L ++SVK
Sbjct: 486 NGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD-KAKALLTQMSVK 542
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 13/188 (6%)
Query: 153 TEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T Y+L L+ C ++ A +V+ +M K G+ P + + + I+G+ G + AVE
Sbjct: 125 THTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVE 184
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
++ M R +P +Y +IN + + MA+ +F +M + CKPN+ TY ++++
Sbjct: 185 LYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRA 319
++ L +A + ++ G GI PD YN+++ EA RL RM GC+PD
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304
Query: 320 SYNIMVDA 327
+YNI++D+
Sbjct: 305 TYNIIIDS 312
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++ + C L+ A EM G+PP A+ YNS + GL G +A
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+RM+++ C+P TY ++I+ K A +EM P++ TYT +++
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
G EA +F++++ G +PDV AYN ++ +A +S M G P+
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNA 408
Query: 319 ASYNIMVDAYGRAG 332
+Y+ ++ + G
Sbjct: 409 VTYSTILHGFCNLG 422
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + K A Y E++ S P +Y L+ C SG A VF++M + G
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ ID L K A++ M P TY +++ + A
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF M + CKP++ TY ++++ ++ L +A + ++ GI PDV Y ++
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDA 327
EA RL +M GC+PD +YN ++D+
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + +A + ++ C P +Y +L+ YC S ++KA+A+ +M
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ + GL G A E+F++M P+ TY++++N K AL
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
KLF M+ K +P+I YT L+ G E A+ +F +L GI+P YN ++
Sbjct: 604 KLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGL 663
Query: 302 -------EAYRLISRMHM 312
EAY L + M
Sbjct: 664 LKEGLSDEAYELFRKWKM 681
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E++ +P T+++L+ C G++ +A VF M + G+ P+ YN+ ++G
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCL 490
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A ++F+ M C P +Y ++IN Y + + A L +M K PN T
Sbjct: 491 RCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVT 550
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y ++ G +A+E+F+++ +G+ P + Y+ L+ EA +L M
Sbjct: 551 YNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMK 610
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
EPD Y I+++ G
Sbjct: 611 EKKLEPDIILYTILIEGMFIGG 632
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D P TY+ +L +C G L++A +F+EM + P+ + ++ +DGL + G
Sbjct: 398 EMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEG 457
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A +F+ M +P+ TY ++N Y K A K+F M C P++ +Y
Sbjct: 458 MVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYN 517
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HM 312
L+N + ++A+ + Q+ + P+ YN +M+ + R+
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSS 577
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G P +Y+I+++ + G
Sbjct: 578 GMLPTLMTYSILLNGLCKHG 597
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Q+ + +A + + + + P TY L+ YC+ + +A VF M
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN I+G KA + +M P+T TY ++ + A
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF +M S P + TY+ L+N + G +EA ++F+ ++ +EPD+ Y L+E
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
+ ++ + G +P +YN+M+ + GL +
Sbjct: 628 MFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSD 670
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y KA+ ++ + P TY ++K C G L A+ +F++M
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSS 577
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ + Y+ ++GL K G+ +A+++F+ MK +P YT++I K +A
Sbjct: 578 GMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVA 637
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
LF+++ + +P TY ++ +EGL +EA E+F +
Sbjct: 638 KGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A A F M + PS V + ++ + K V + +M + + +
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + A+ ++ +M +P++ T+T L+N EG + A E++ ++ +G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 290 IEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDA 327
EPDV +YN L+ A + +M GC+P+ +YN ++D+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + ++ S +PT TY++LL C G L++A +F+ M++ L P ++Y I+
Sbjct: 567 AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
G+ GG + A +F ++ D QP TY +MI K S A +LF + + K
Sbjct: 627 GMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMK 683
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 13/222 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI+ Y ++ ++A L+ L+ + I E TY ++ A SG E+A V+ +M
Sbjct: 351 ILIDVYVKRCQWEEA-VKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLA 409
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ PSA Y + I K G +KA+EIF+ M R C+ + TY+ +I+ KA + M
Sbjct: 410 AGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEM 469
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL+LF++M CKPN+ T+ +L+ A + G E+A E+FEQ+Q G +PD Y L+
Sbjct: 470 ALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLIT 529
Query: 303 AY----------RLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
AY + +M GC PD A +N +++ ++G+
Sbjct: 530 AYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGV 571
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ Y ++L+ C P TY +L+ Y E+A V + K + YN+ I
Sbjct: 330 AQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVIS 389
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
K G P++A++++++M +PS TYT +I+ YGK + AL++F +M C+
Sbjct: 390 ACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCER 449
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ TY++L++A + G E A E+F ++ +P+V +N+L+ +A L
Sbjct: 450 NVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELF 509
Query: 308 SRMH-MGCEPDRASYNIMVDAYGRAG 332
+M GC+PD +Y ++ AY R G
Sbjct: 510 EQMQTQGCKPDSITYCGLITAYERGG 535
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ + L+ A+ V+++M + G P+ V YN ID +K ++AV++ +
Sbjct: 313 TYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTL 372
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ Q TY +I+ K+ + ALK++ +M + KP+ TYTAL++A+ ++G
Sbjct: 373 EKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQV 432
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIM 324
E+A EIF + G E +V Y++L+ A L S+MH C+P+ ++N +
Sbjct: 433 EKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSL 492
Query: 325 VDAYGRAG 332
+ A G
Sbjct: 493 IAACSHGG 500
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 95/194 (48%), Gaps = 17/194 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ L +A + EMR G+ + Y++ ++ +K A +++++M
Sbjct: 278 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 337
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY ++I++Y K + A+K+ + + + + TY +++A + G
Sbjct: 338 LEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQP 397
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
E+A +++E++ AG++P Y AL+ AY +I R GCE + +Y
Sbjct: 398 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRR---GCERNVITY 454
Query: 322 NIMVDAYGRAGLHE 335
+ ++ A +AG E
Sbjct: 455 SSLISACEKAGRWE 468
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 21/105 (20%)
Query: 243 ALKLFNEMR----SHKCKP--NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A+++F+ +R SH+ ++ TYT +++ A E+ +++ GI+ +V+
Sbjct: 254 AVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHT 313
Query: 297 YNALM-------------EAYRLISRMHMGCEPDRASYNIMVDAY 328
Y+ALM + Y+ + + GC P+ +YNI++D Y
Sbjct: 314 YSALMNVCIKANELDLAQDVYKQM--LEEGCSPNLVTYNILIDVY 356
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D P TY LL C G L++A +F M G PP VVYN IDG K G
Sbjct: 112 EMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG 171
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ +A +F+ M C P+ TY +++ + + + LF +M C PNI T+
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L++ F + G EA +F +++ G PDV +YN LM EA RL+ M
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD SYNI++D Y ++G
Sbjct: 292 GVGPDIVSYNILIDGYSKSG 311
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 46/231 (19%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR---------------------- 178
TY ++L + C+P TY LL++ C + E+A +VFR
Sbjct: 39 TYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLC 98
Query: 179 -------------EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
EM G P+ V Y S + GL K G ++AV++F RM C P
Sbjct: 99 RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV 158
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
Y ++I+ + K A +LF EM C P + TY +L++ F+R+G + +F+ +
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMV 325
G P+++ +N L+ EA+RL M +GC PD SYN ++
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLM 269
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y +L+ + G + +A +F EM + G P+ YNS + G + G +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M R C P+ T+ +++ + K A +LF EMRS C P++ +Y L+
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGM 272
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDR 318
+G EA+ + ++ +G+ PD+ +YN L++ Y + G EPD
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332
Query: 319 ASYNIMVDAYGRAG 332
SY+ ++D RAG
Sbjct: 333 FSYSTIIDCLCRAG 346
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 95/179 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + +K +A + E+L+ CIPT TY LL + G + +++F++M +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ +N+ +DG K G+ +A +F M+ C P +Y ++ K A
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEA 281
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+L EM P+I +Y L++ +++ G + A ++F ++ +G+EPD ++Y+ +++
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + +K + + + ++L C+P T+ LL +C G + +A +F EMR G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP V YN+ + G+ G P +A + + M R P +Y ++I+ Y K+ A+
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF E+ +P+ +Y+ +++ R G A +F+ + G PD L+
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377
Query: 305 RLISRMHMGCE 315
R+ CE
Sbjct: 378 CRGERLTESCE 388
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y LL+ SG + + +M G P+ Y + L + ++A +F+ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C P+ +Y+++I + K A +L NEM +PN+ TY +L++ + G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+EA ++F ++ G PD YN L+ EAYRL M GC P +YN +
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 325 VDAYGRAG 332
+ + R G
Sbjct: 199 LSGFSRKG 206
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + +A +LE+ C P +Y L++ C G +A+ + REM + G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN IDG K G A+++F + + +P +Y+ +I+ +A K A
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+F +M ++ P+ LV R E+ E+F+ + P + YN LM
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S P +Y +L+ Y SG L+ A +F E+ K GL P A Y++ ID L + G
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +F+ M + P ++ + + + +LF M +C P I Y
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
L+ + ++ EIF +L G PDV ++E R
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + A + E+ S P +Y+ ++ C +G + A VF++M
Sbjct: 302 ILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIAN 361
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P A V + GL +G ++ E+FQ M + C P Y L++ KA +S
Sbjct: 362 GSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDV 421
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
++F+E+ P++ ++ R E AE
Sbjct: 422 CEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 46/156 (29%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
T +Y ++ + K+ + +N+M C PN TY L+ + + EEA +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 283 EQLQGAGIEPDVYAYNALM----------------------------------------- 301
+ G P+V++Y+ L+
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L SRM + GC PD YN+++D + + G
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG 171
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 133/269 (49%), Gaps = 19/269 (7%)
Query: 64 PTAQQILRFVQ---REVDSNTIWDAFDSLP-----PTHATWDDLINVSVQLRLNKKWDPI 115
PT + + + R+ + D FD + PT T++ LI V+ R +K + I
Sbjct: 589 PTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQI 648
Query: 116 V---LMSCVS------ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYC 165
+ ++ VS ++ Y KA FTY L + + TY LLKA C
Sbjct: 649 LDEMTLAGVSPNEHTYTTIMHGYASLGDTGKA-FTYFTKLRDEGLQLDVYTYEALLKACC 707
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
SG ++ A AV +EM +P + +YN IDG + G+ +A ++ Q+MKR+ QP
Sbjct: 708 KSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIH 767
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TYT IN KA A K EM+S KPN+ TYT L+N +AR L E+A FE++
Sbjct: 768 TYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEM 827
Query: 286 QGAGIEPDVYAYNALMEAYRLISRMHMGC 314
+ +G++PD Y+ LM + + + GC
Sbjct: 828 KLSGLKPDRAVYHCLMTSLLSRATVAHGC 856
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 116 VLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ MS V+ +L+ + + + A+ + E + Y ++ AYC ++KAE
Sbjct: 377 IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAE 436
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ REM + G+ +Y++ +DG G+ K + +F+R K PS TY +INLY
Sbjct: 437 ALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLY 496
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K K AL++ EM K N+ TY+ L+N F + A IFE L GI+PDV
Sbjct: 497 AKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDV 556
Query: 295 YAYNALMEAYRLISRM 310
YN ++ A+ + +M
Sbjct: 557 VLYNNIITAFCGMGKM 572
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A A+F ++ K G+ P V+YN+ I G +AV + M
Sbjct: 523 TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEM 582
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ +P+T T+ +I+ + + + AL +F+ MR C P + TY AL+ +
Sbjct: 583 QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM 642
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+AE+I +++ AG+ P+ + Y +M Y
Sbjct: 643 EKAEQILDEMTLAGVSPNEHTYTTIMHGY 671
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 109/261 (41%), Gaps = 46/261 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ +A T E+ R PT T+ ++ + G ++KA VF MR G
Sbjct: 562 IITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSG 621
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKSF 241
P+ YN+ I GL++ +KA +I M P+ TYT +++ Y G K+F
Sbjct: 622 CIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAF 681
Query: 242 M--------------------------------ALKLFNEMRSHKCKPNICTYTALVNAF 269
AL + EM + N Y L++ +
Sbjct: 682 TYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGW 741
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
AR G EA ++ +Q++ G++PD++ Y + + A + I M +G +P+
Sbjct: 742 ARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNV 801
Query: 319 ASYNIMVDAYGRAGLHEGKCS 339
+Y +++ + RA L E S
Sbjct: 802 KTYTTLINGWARASLPEKALS 822
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +L+ P Y ++ A+C G +++A +EM+K P+ + I G +
Sbjct: 544 FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFAR 603
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +KA+++F M+ C P+ TY +I + K A ++ +EM PN T
Sbjct: 604 KGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHT 663
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS- 320
YT +++ +A G +A F +L+ G++ DVY Y AL++A RM +
Sbjct: 664 YTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMS 723
Query: 321 ----------YNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 724 AQNIPRNTFIYNILIDGWARRG 745
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY L+ Y G + KA V +EM G+ + Y+ I+G LK + A I
Sbjct: 484 PSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAI 543
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ + +D +P Y +I + K A+ EM+ + KP T+ +++ FAR
Sbjct: 544 FEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFAR 603
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
+G ++A ++F+ ++ +G P V+ YNAL+ +A +++ M + G P+ +
Sbjct: 604 KGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHT 663
Query: 321 YNIMVDAYGRAG 332
Y ++ Y G
Sbjct: 664 YTTIMHGYASLG 675
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ Y L++ Y G + +A F +MR G+ PS+ VY + I G + ++A+
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY+++++ + K + A F E + N Y ++ A+ +
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRAS 320
++AE + +++ GI+ + Y+ +M+ Y ++ G P +
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT 488
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 489 YGCLINLYAKLG 500
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ Y ++ +A T+ ++ P+ Y L+ AY + +E+A + R+M++
Sbjct: 316 LMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEE 375
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S V Y+ + G K GN + A FQ K + Y +I Y + A
Sbjct: 376 GIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKA 435
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM I Y +++ + G ++ +FE+ + G+ P V Y L+
Sbjct: 436 EALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINL 495
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAY 328
Y + ++ H G + + +Y+++++ +
Sbjct: 496 YAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGF 531
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+K+ PS + Y LM+N Y + A + F +MR+ +P+ YT
Sbjct: 295 NWQAVVSAFERIKK----PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYT 350
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++A+A EEA +++ GIE + Y+ L+ +
Sbjct: 351 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGF 391
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 28/225 (12%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E++ IP TY+ ++ C + +EKA +F+EM++ G+ P VY +
Sbjct: 204 EKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTL 263
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G ++A F M+RD C P+ TYT +I+ Y K+ K A +++ M S C
Sbjct: 264 IDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGC 323
Query: 256 KPNICTYTALVNAFAREGLCEEAEEI-----------------FEQLQGAGIEPDVYAYN 298
PNI TYTAL++ + G E+A +I F + GA EP+V+ Y
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYG 383
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
AL+ EA L+ M + GCEP+ Y+ ++D +AG
Sbjct: 384 ALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAG 428
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 123/287 (42%), Gaps = 64/287 (22%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+++ + ++A + E+ C P TY L+ AY S + KA V+ M G
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC-----------------QPSTETY 227
P+ V Y + IDGL K G +KA +I++ MK++ +P+ TY
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA + A L M C+PN Y AL++ + G +EA+E+F +
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G +P+VY Y++L+ E
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 502
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
AY+L+ M GC P+ +Y M+D +G++G E KC L ++S K
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVE-KCLELLQQMSSK 548
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ C +G L++A+ VF M + G P+ Y+S ID L K A+
Sbjct: 410 CEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLAL 469
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT MI+ K K+ A KL M C PN+ TYTA+++ F
Sbjct: 470 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGF 529
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDR- 318
+ G E+ E+ +Q+ G P+ Y L+ EA++L+ M P
Sbjct: 530 GKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHV 589
Query: 319 ASYNIMVDAYGR 330
A Y +++ + R
Sbjct: 590 AGYRKVIEGFNR 601
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L++ + + + + C G EKA V REM G P Y+ I
Sbjct: 171 AEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIG 230
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +KA ++FQ MKR+ P YT +I+ + KA A F+EM C P
Sbjct: 231 YLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAP 290
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
N+ TYTAL++A+ + +A E++E + G P++ Y AL++
Sbjct: 291 NVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + +++A + + M G P+ VVY++ IDG K G +A E+
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ TY+ +I+ K + +ALK+ ++M + C PN+ YT +++ +
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G +EA ++ ++ G P+V Y A+++ + L+ +M GC P+ +
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556
Query: 321 YNIMVDAYGRAGL 333
Y ++++ GL
Sbjct: 557 YRVLINHCCSTGL 569
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS-----GLLEKAEAVFRE 179
L+ AY + + A +++ C P Y +L+ C S +L+ AE + E
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + G+ + V +++ L G +KA + + M P T TY+ +I ASK
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +LF EM+ + P++ YT L+++F + G E+A F++++ G P+V Y A
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297
Query: 300 LMEAY---RLISR--------MHMGCEPDRASYNIMVDAYGRAG 332
L+ AY R +S+ + GC P+ +Y ++D +AG
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAG 341
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + +L+ P TY+ L+ L+ A V +M + P+ V+Y I
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMI 491
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K G +A ++ M+ C P+ TYT MI+ +GK+ + L+L +M S C
Sbjct: 492 DGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCA 551
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHMGC 314
PN TY L+N GL +EA ++ E+++ V Y ++E + I+ +++
Sbjct: 552 PNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSF 611
Query: 315 E-------PDRASYNIMVDAYGRAG 332
E P Y +++D + +AG
Sbjct: 612 EISENDSVPVAPVYRVLIDNFIKAG 636
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E T + C SG +A ++ + K P V+Y I GL + ++A++
Sbjct: 10 EFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLT 66
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
RM+ C P+ TY +++ K ++ + M + C P+ + +LV+A+ R G
Sbjct: 67 RMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSG 126
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-HMGCEPDRASYNIMV 325
YAY AY+L+ +M GC+P YNI++
Sbjct: 127 --------------------DYAY-----AYKLLKKMVQCGCQPGYVVYNILI 154
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 63/255 (24%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL +K EF +P Y ++ C + L E+A MR P+ + Y
Sbjct: 31 SLLEKEEF----------VPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTY 80
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ G L + I M + C PS + +++ Y ++ A KL +M
Sbjct: 81 RILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQ 140
Query: 253 HKCKPNICTYTALVNA------------------------------------FAREGLC- 275
C+P Y L+ F+R LC
Sbjct: 141 CGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR-CLCG 199
Query: 276 ----EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
E+A + ++ G PD Y+ ++ +A++L M G PD
Sbjct: 200 IGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYV 259
Query: 321 YNIMVDAYGRAGLHE 335
Y ++D++ +AG E
Sbjct: 260 YTTLIDSFCKAGFIE 274
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ +G+ +K ++ C P TY +L+ C +GLL++A + EM++
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTY 584
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQ--RMKRDCCQPSTETYTLMINLYGKASKSFM 242
P Y I+G N + ++ + + P Y ++I+ + KA + +
Sbjct: 585 WPRHVAGYRKVIEGF----NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEI 640
Query: 243 ALKLFNEMRSHK--CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL+L E+ S N + L+ + ++A E++ + G P++ L
Sbjct: 641 ALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHL 700
Query: 301 MEAYRLISR 309
++ ++R
Sbjct: 701 IKGLLRVNR 709
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 11/204 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y +LL S C P T+ +L++ C +G +A R + ++ + P ++N I GL
Sbjct: 49 VYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLF 108
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--RSHKCKPN 258
K GNP +AV++F+ M+ P TY +I+ K+ A +L EM R K P+
Sbjct: 109 KDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPD 168
Query: 259 ICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM------- 310
I TY L+NA ++G EEA EI + ++ AG PDV YN+++ A + R+
Sbjct: 169 IVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228
Query: 311 -HMGCEPDRASYNIMVDAYGRAGL 333
M C PD ++N ++D + +AG+
Sbjct: 229 KTMSCSPDLVTFNTLLDGFCKAGM 252
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 27/233 (11%)
Query: 143 LELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+LD + P TY ++ A C++G + +A + + M P V +N+ +DG
Sbjct: 190 LEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDG 246
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K G +A+E+ + M R+ P TYT+++N + + +A L E+ P+
Sbjct: 247 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 306
Query: 259 ICTYTALVNAFAREGLCEEAE---------EIFEQLQGAGIEPDVYAYNALM-------- 301
+ YT+LV+ + G EEA EI ++ + P ++ YN ++
Sbjct: 307 VIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 366
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+A LIS + G PD +YN ++D +A C + S+ +P
Sbjct: 367 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMR---------KYGLPPSAVVYNSYIDGLLK 201
IP Y L+ C SG +E+A + +EM + P YN + GL+K
Sbjct: 304 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIK 363
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ KAV + + P TY +I+ KA++ A L +EM S C PN T
Sbjct: 364 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVT 423
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASY 321
++V R G ++A + ++ P+V Y +L++ RM C
Sbjct: 424 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC------- 476
Query: 322 NIMVDAYGRAGLHEGKCSYSLVELSVKH 349
+++DA G+ +Y + +S+ H
Sbjct: 477 -VVLDAMRGQGVALDDFAYRKLIVSMIH 503
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
YN +D L+K G+ + ++++ + C P+ T+ ++I KA ++ AL+ +
Sbjct: 30 YNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALD 89
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
P++ + L++ ++G ++A ++FE ++ + + PD++ YN ++
Sbjct: 90 EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149
Query: 302 EAYRLISRM---HMGCEPDRASYNIMVDA 327
+A L+ M PD +YN +++A
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINA 178
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 201 KGGNPQKAVEIFQ-RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ P A++ F ++D + +Y ++++ K+ F K++ ++ C PN+
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
T+ L+ + G A E L + PDVY +N L+ +A +L
Sbjct: 63 VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122
Query: 310 MHMG-CEPDRASYNIMVDAYGRAG 332
M PD +YN ++ ++G
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSG 146
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 128/243 (52%), Gaps = 17/243 (6%)
Query: 103 SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
++Q + +K + +C++IL+ Q L +K E L R P + +L+K
Sbjct: 152 AIQPIVREKPSLKAISTCLNILV--ESKQIDLAQKCLLYVNEHLKVR--PNTCIFNILVK 207
Query: 163 AYCMSGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCC 220
+C SG LE A V EM+K P+ + Y++ IDGL G ++A+E+F+ M +D
Sbjct: 208 HHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQI 267
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
P TY+++I + K+ A K+ MRS+ C PN+ Y+ L+N F +EG EEA+E
Sbjct: 268 LPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKE 327
Query: 281 IFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYG 329
+F++++ +G++PD Y L+ EA L+ M M C+ D ++N+++
Sbjct: 328 VFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLC 387
Query: 330 RAG 332
R G
Sbjct: 388 REG 390
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDL---INVSVQLRLNKKWDPIVLMSCVS 122
AQ+ L +V + F+ L H DL + V +++ +++ P V+ S
Sbjct: 182 AQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVIT--YS 239
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L+ G L + E + + +P TY++L+K +C G ++A + MR
Sbjct: 240 TLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRS 299
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P+ Y+ ++G K G ++A E+F MK +P T YT +IN + +
Sbjct: 300 NGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDE 359
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
A++L EM KCK + T+ L+ REG +EA + E L G+
Sbjct: 360 AMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGV 407
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y++L+ +C G LE+A+ VF EM+ GL P V Y + I+ G +A+
Sbjct: 302 CDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAM 361
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ + M C+ T+ +++ + + AL++ + N +Y ++N
Sbjct: 362 ELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFL 421
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++G E++ + + G P N L+
Sbjct: 422 CQKGELEKSCALLGLMLSRGFVPHYATSNELL 453
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 77/179 (43%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + ++ ++A+ + E+ S P Y L+ +C G +++A + +EM +
Sbjct: 311 VLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEM 370
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
AV +N + GL + G +A+ + + + + + +Y +++N + + +
Sbjct: 371 KCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKS 430
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L M S P+ T L+ G+ + A L G P+ ++ L+E
Sbjct: 431 CALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIE 489
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 116/221 (52%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ YG+ ++A L+ L+ + I P TY ++ A MSG ++A ++ M
Sbjct: 271 LIDVYGKTGAWEEA-IRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAA 329
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+A Y + I K G +A++IFQ M R C+ + TY+ +I+ KA + +A
Sbjct: 330 GAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELA 389
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+LF EM + C+PN+ TY +L+ A A+ E+A+E+FEQ+Q G +PD + L+ A
Sbjct: 390 LELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAA 449
Query: 304 Y-------RLISRMHM----GCEPDRASYNIMVDAYGRAGL 333
Y R ++ C PD YN +V A + GL
Sbjct: 450 YDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGL 490
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L C P TY L+ Y +G E+A V + + G+ P YN+ I
Sbjct: 253 YRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNM 312
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G Q+A+ I++RM QP+ TYT +I+ YGK + AL++F +M C+ N+ T
Sbjct: 313 SGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVIT 372
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y++L++A + G E A E+F ++ G P+V YN+L+ +A + +M
Sbjct: 373 YSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQ 432
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
H GC+PD ++ ++ AY RAG
Sbjct: 433 HRGCKPDAVTFGGLIAAYDRAG 454
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 17/186 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ L+ A V+R+M G P+ V YN+ ID K G ++A+ + +
Sbjct: 232 TYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDAL 291
Query: 216 KRDCCQPSTETYTLMI---NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+R P TY +I N+ G+A + AL+++ M + +P TYTAL++A+ +
Sbjct: 292 ERQGIDPEIRTYNTVIIACNMSGQAQE---ALRIYERMLAAGAQPTATTYTALISAYGKN 348
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASY 321
G + A +IF+ + G E +V Y++L+ A L MH GC P+ +Y
Sbjct: 349 GQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTY 408
Query: 322 NIMVDA 327
N ++ A
Sbjct: 409 NSLIAA 414
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ L +A + EMR G+ + Y++ ++ +KG A++++++M
Sbjct: 197 TYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQM 256
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY +I++YGK A+++ + + P I TY ++ A G
Sbjct: 257 LAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQA 316
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
+EA I+E++ AG +P Y AL+ AY ++ M GCE + +Y+ +
Sbjct: 317 QEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSL 376
Query: 325 VDAYGRAGLHE 335
+ A +AG E
Sbjct: 377 ISACEKAGRWE 387
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 56/188 (29%)
Query: 199 LLKGGNPQKAVEIFQRMKR--------DCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
L K G+ ++A E+F ++ C +T TYT MI+ G + AL+L EM
Sbjct: 164 LNKSGHVRRAQELFDWLRGLDDSHDLYPLC--NTMTYTTMISQCGTQQQLRRALELVAEM 221
Query: 251 RSHKCKPNICTYTALVN-----------------------------------AFAREGLC 275
RS + N+ TY+AL+N + + G
Sbjct: 222 RSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAW 281
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
EEA + + L+ GI+P++ YN ++ EA R+ RM G +P +Y +
Sbjct: 282 EEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTAL 341
Query: 325 VDAYGRAG 332
+ AYG+ G
Sbjct: 342 ISAYGKNG 349
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLLEK+ +F EM +G+P S Y + I+ + G + ++
Sbjct: 138 CKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSL 197
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ +RMK++ PS TY +IN + ++ L LF EMR +P+I TY L+NA
Sbjct: 198 ELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNA 257
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PD 317
A GL +EAE +F + G+ PD+ Y L+E + ++++ E PD
Sbjct: 258 CANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPD 317
Query: 318 RASYNIMVDAYGRAG 332
+SYN++++AY G
Sbjct: 318 ISSYNVLLEAYASKG 332
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E +G+ + +K E+ S +P +Y +LL+AY G + A VFR+M++
Sbjct: 289 LVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEAR 348
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+AV Y+ ++ G E+F MK +P TY ++I ++G+ +
Sbjct: 349 CVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVV 408
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF++M +PN+ TY L+ A + GL E+A++I + GI P AY ++EAY
Sbjct: 409 TLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAY 468
Query: 305 R----------LISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
+ + M+ MG +P +YN +++ + R GL++
Sbjct: 469 GQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYK 510
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 46/256 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EAY K + A + ++ ++RC+P TY++LL Y G + +F EM+
Sbjct: 323 VLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVS 382
Query: 184 GLPPSAVVYNSYID-------------------------------GLL----KGGNPQKA 208
P YN I+ GL+ KGG + A
Sbjct: 383 NTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDA 442
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+I M PST+ YT +I YG+A+ AL +FN M KP + TY +L+N
Sbjct: 443 KKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINM 502
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPD 317
FAR GL +E+E I ++ +G+ D ++N ++E YR + +PD
Sbjct: 503 FARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPD 562
Query: 318 RASYNIMVDAYGRAGL 333
++ ++ Y AGL
Sbjct: 563 ERTFEAVLSVYCTAGL 578
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 15/252 (5%)
Query: 95 TWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE 154
W+ L+++ ++R I+ + L+ A + L +AE + + + +P
Sbjct: 228 NWEGLLSLFAEMRHEGIQPDIITYNT----LLNACANRGLGDEAEMVFRTMNEGGMVPDI 283
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY L++ + LEK + +EM G P YN ++ G+ + A+ +F++
Sbjct: 284 TTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQ 343
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M+ C P+ TY++++NLYG + +LF EM+ +P++ TY L+ F G
Sbjct: 344 MQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGY 403
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNI 323
+E +F + +EP++ Y L+ +A +++ M G P +Y
Sbjct: 404 FKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTG 463
Query: 324 MVDAYGRAGLHE 335
+++AYG+A +E
Sbjct: 464 VIEAYGQAASYE 475
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 13/189 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
+ +AL+ K + G +++ +F+ M R+ P+ +Y I L + G +K+ EIF+
Sbjct: 107 NDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFE 166
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M S +YT +IN YG+ + ++L+L M+ K P+I TY ++N+ AR G
Sbjct: 167 EMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGG 226
Query: 274 LCEEA-EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASY 321
L E +F +++ GI+PD+ YN L+ EA + M+ G PD +Y
Sbjct: 227 LNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTY 286
Query: 322 NIMVDAYGR 330
+V+ +G+
Sbjct: 287 RNLVETFGK 295
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ LH+ A+ L + + +P+ Y +++AY + E+A +F M + G
Sbjct: 429 LIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMG 488
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS I+ +GG +++ I +M +++ +I Y + + A+
Sbjct: 489 SKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAI 548
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K + E+ + +P+ T+ A+++ + GL +E+EE F +++ +GI P V Y ++ Y
Sbjct: 549 KTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVY 608
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 102/200 (51%), Gaps = 10/200 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEAYGQ + +++A + + + PT +TY L+ + GL +++EA+ +M + G
Sbjct: 464 VIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESG 523
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ +N I+G +GG ++A++ + +++ QP T+ ++++Y A +
Sbjct: 524 VARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESE 583
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F E+R+ P++ Y ++ +AR ++A E+ +++ N + +
Sbjct: 584 EQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEM----------VTNKVSNIH 633
Query: 305 RLISRMHMGCEPDRASYNIM 324
+++ +M G D +++ ++
Sbjct: 634 QVVGKMMKGDYDDYSNWQMV 653
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 31/134 (23%)
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICT 261
G+ + +EIF+ + S + L+ + + +L+LF M R CKPN
Sbjct: 91 GSIARCLEIFKN------KLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHI 144
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASY 321
YT +++ REGL E++ EIFE++ G+ V++Y AL
Sbjct: 145 YTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTAL--------------------- 183
Query: 322 NIMVDAYGRAGLHE 335
+++YGR G +E
Sbjct: 184 ---INSYGRHGQYE 194
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ ++A ++ R P T+ L+ A S ++A V+ +M
Sbjct: 367 LIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASS 426
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ YN+ I KGG+ K + +F+ M + C+ S TY+ +I+ KA + +AL
Sbjct: 427 HPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLAL 486
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF EMR C PN+ +Y +L+ A A+ E+A E+FEQ+Q G PDV +Y AL++AY
Sbjct: 487 QLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAY 546
Query: 305 RLISRMHMG------------CEPDRASYNIMVDAYGRAGL 333
+ C PD YN ++D G+
Sbjct: 547 ERGGQWRRALAAFEEMIRARPCAPDSIVYNTIIDVLWETGV 587
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K A Y ++ + C TY L+ Y SG E+A AV +M++ + P +N+
Sbjct: 342 YKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNT 401
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ Q+A+ ++++M P+T TY +I+ + K L +F EM
Sbjct: 402 LMIACNTSNQWQEALRVYEQMAASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKG 461
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
C+ ++ TY++L++A + G + A ++FE+++G G P+V +YN+L+ +A
Sbjct: 462 CERSVITYSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAA 521
Query: 305 RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ +M GC PD SY ++ AY R G
Sbjct: 522 EVFEQMQRQGCRPDVVSYTALIQAYERGG 550
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
EFT+ ++ S C+ +D L +A A+ EMR G+ + +++ ++
Sbjct: 291 EFTFTSMI-SNCVAQQD--------------LGRAMALAEEMRDRGIERNVHTFSALMNV 335
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+K G + A+++++ M+ C + TY +I++YGK+ + AL + +M+ + +P
Sbjct: 336 CIKCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPV 395
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LI 307
T+ L+ A +EA ++EQ+ + P+ YNAL+ A+
Sbjct: 396 TRTFNTLMIACNTSNQWQEALRVYEQMAASSHPPNTTTYNALISAHSKGGDLPKVLAVFK 455
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+ GCE +Y+ ++ A +AG E K + L E
Sbjct: 456 EMVQKGCERSVITYSSLISACEKAG--EWKLALQLFE 490
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 141/283 (49%), Gaps = 24/283 (8%)
Query: 83 WDAF-----DSLPPTHATWDDLINVSVQ-------LRLNKKWDPIVLMSCVSILLIEAYG 130
WD + + + P T+D L++ S + L L K + L ++I A+
Sbjct: 50 WDVYHQMLAEGIDPDEVTYDILVSGSGKNGYPIDRLFLEIKSRGVALTLRSYNVVICAFT 109
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
++ K E E++ P ++ L+ AY MS E+ VF M+ G+ P V
Sbjct: 110 KEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIV 169
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y + I + ++A+E+F+ M + CQP Y+L++++YGKA AL +F+ +
Sbjct: 170 TYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRL 229
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
+ +PNI TYT+L++A +GL EE+ + F Q++ G DV+ N +++AY
Sbjct: 230 QLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMV 289
Query: 305 ----RLISRM-HMGCEPDRASYNIMVDAYGRAG-LHEGKCSYS 341
L+ R+ G P+RASY I+V+ + AG + E +Y+
Sbjct: 290 NDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVEEALAAYA 332
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + S+HK+A + E++ ++C P Y+LL+ Y +GL+ A +F ++ G
Sbjct: 174 LIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEG 233
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y S I L G +++ + F +M+ C+ MI+ Y KA A
Sbjct: 234 HRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAA 293
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
L + + + PN +Y +V F G EEA + + GAG + +
Sbjct: 294 NLLHRLTAQGVCPNRASYAIIVEGFLHAGHVEEALAAYASMSGAGFKDE 342
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ AY + + A V+ +M G+ P V Y+ + G K G P +F +K
Sbjct: 33 YNAMIAAYYQAKRPKDAWDVYHQMLAEGIDPDEVTYDILVSGSGKNGYPID--RLFLEIK 90
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +Y ++I + K ++ EM + +P++ ++ AL+ A+A E
Sbjct: 91 SRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPE 150
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMV 325
++F ++ AG+ PD+ Y L+ EA + M + C+PD Y+++V
Sbjct: 151 RGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLV 210
Query: 326 DAYGRAGL 333
YG+AGL
Sbjct: 211 SVYGKAGL 218
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 9/169 (5%)
Query: 91 PTHATWDDLINVSVQLRLNKK----WDPIVLMSC-----VSILLIEAYGQKSLHKKAEFT 141
P T+ LI + + ++K+ ++ +V+ C V LL+ YG+ L A
Sbjct: 166 PDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLI 225
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ L P TY L+ A+ GLLE++ F +M YG + N+ ID K
Sbjct: 226 FHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAK 285
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
G A + R+ P+ +Y +++ + A AL + M
Sbjct: 286 AGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVEEALAAYASM 334
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A Q S + A + +++ S C P TY ++ + G E+AE +FRE+ + G
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P A+ YNS + K GN K +++ + + + TY MI++YGK + +A+
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++EMR+ C P+ TYT ++++ + EA ++ E + AG++P + A++AL+ AY
Sbjct: 419 GLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAY 478
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
R + G +PDR +Y +M+D + R+G
Sbjct: 479 AKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSG 517
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+ + R I P ++ L+ A SG L A+ E+R+ GL P + YN+ I
Sbjct: 244 LDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISAC 303
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N + AV +F+ M C+P TY M++++G+ K+ A +LF E+ P+
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-------- 311
TY +L+ AFA+EG ++ E EQL AG + + YN ++ Y + R+
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 312 ---MGCEPDRASYNIMVDAYGR 330
MGC PD +Y +M+D+ G+
Sbjct: 424 MRAMGCTPDAVTYTVMIDSLGK 445
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P+ ++SC +++IEAYG+ L ++AE L + I + L+ AY SGL EKA
Sbjct: 742 PLNILSC-RVIIIEAYGKIKLWQQAEILVKGLRQASGIDRR-IWNALIHAYAESGLYEKA 799
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
AVF M K G P+ N + L+ G + + + ++ + S T L+++
Sbjct: 800 RAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDA 859
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ KA F +K++N M++ PN+ Y ++++ + E + +++GAG +PD
Sbjct: 860 FAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPD 919
Query: 294 VYAYNALMEAYRLI-----------SRMHMGCEPDRASYNIMVDAYGRA 331
+ NAL+ Y S + G EPD +YN ++ Y R+
Sbjct: 920 LAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRS 968
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + Y +L++ P EDTY L+ YC S E+ + EM K G
Sbjct: 926 LLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRG 985
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S + K ++A +IF+ M+ Q + Y +M+ +Y A A
Sbjct: 986 LTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M+ +P I T L+ ++ G EAE + L+ + +E Y+ + +AY
Sbjct: 1046 NLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAY 1105
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDA 327
+L+ G EPD + + A
Sbjct: 1106 LKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA 1139
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y ++ C E + EM G P + N+ ++ GN + +
Sbjct: 882 LPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQ 941
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+++ + +P +TY +I +Y ++ + L NEM P + +Y +L+ A A
Sbjct: 942 VYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASA 1001
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHM-GCEPDRA 319
+ L E+A++IFE+++ + + Y+ +M+ YR L++ M G EP A
Sbjct: 1002 KAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIA 1061
Query: 320 SYNIMVDAYGRAG 332
+ +I++ +YG AG
Sbjct: 1062 TMHILMTSYGTAG 1074
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ ++ K E T +L+ + E TY ++ Y G L+ A ++ EMR G
Sbjct: 369 LLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMG 428
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV Y ID L K +A ++ + M +P+ ++ +I Y K + A
Sbjct: 429 CTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAE 488
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F+ M + KP+ Y +++ FAR G E+ ++ ++ PD Y L+ A
Sbjct: 489 NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVA 547
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ A Y E+ C P TY +++ + + +A V +M G
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + +++ I KGG A F M +P Y +M++++ ++ + L
Sbjct: 464 LKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKML 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL------------------- 285
L+ +M + +P+ Y L+ A A+E CEE EE+ + +
Sbjct: 524 CLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKAR 583
Query: 286 ---QGA---------GIEPDVYAYNALMEAYRLISRMHMG 313
QGA G +PD+ + ++M AY + + G
Sbjct: 584 CVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEG 623
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 132 KSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+S + FT L + R + P +Y LL A + L E+A+ +F EMR +
Sbjct: 967 RSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRS 1026
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y+ + GN KA + MK D +P+ T +++ YG A + A + N +
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNL 1086
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
+S + + Y+ + +A+ + G +++ G+EPD + + A L
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASL 1142
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 19/195 (9%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL-KGGNPQKAVEIFQ 213
D A +++A S +A F + + P S V + + G+L + A E+F
Sbjct: 156 DEVAFVVRAVGESSW-RRALDAFEWLARSSAPASRAV--AVVLGVLGRARQDSIAEEVFL 212
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
R + + + + M+ +Y ++ + A +L + M P++ ++ L+NA ++ G
Sbjct: 213 RFAGE--GATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSG 270
Query: 274 LCEE--AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
A ++ +++ +G+ PDV YN L+ A S + C PD +
Sbjct: 271 CLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWT 330
Query: 321 YNIMVDAYGRAGLHE 335
YN MV +GR G E
Sbjct: 331 YNAMVSVHGRCGKAE 345
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 9/172 (5%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIV---------LMSCVSILLIEAYGQKSLHKKAE 139
L P ++ L+ S + L ++ D I L + ++++ Y H KAE
Sbjct: 986 LTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ + PT T +L+ +Y +G +AE V ++ L S + Y++ D
Sbjct: 1046 NLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAY 1105
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
LK G+ MKRD +P + +T I ++ A+ L ++
Sbjct: 1106 LKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ 1157
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D P TY LL C G L++A +F M G PP VVYN IDG K G
Sbjct: 112 EMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG 171
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ +A +F+ M C P+ TY +++ + + + LF +M C PNI T+
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L++ F + G EA +F +++ G PDV +YN L+ EA RL+ M
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS 291
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD SYNI++D Y ++G
Sbjct: 292 GVGPDIVSYNILIDGYSKSG 311
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + Q ++A + + C P +Y++L+ C +++A + EM G
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y S + GL K G ++AV++F RM C P Y ++I+ + K A
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF EM C P + TY +L++ F+R+G + +F+ + G P+++ +N L+
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMV 325
EA+RL M +GC PD SYN ++
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLI 269
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY ++L + C+P TY LL++ C + E+A +VFR M G P+ Y+ I GL
Sbjct: 39 TYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLC 98
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+G +A E+ M QP+ TY +++ K K A+ LF+ M C P+
Sbjct: 99 RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV 158
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLIS----R 309
Y L++ F+++G EA +FE++ G P V+ YN+L+ + R+ S
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
+ GC P+ ++N ++D + + G
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMG 241
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y +L+ + G + +A +F EM + G P+ YNS + G + G +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M R C P+ T+ +++ + K A +LF EMRS C P++ +Y L+
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGM 272
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDR 318
+G EA+ + ++ +G+ PD+ +YN L++ Y + G EPD
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332
Query: 319 ASYNIMVDAYGRAG 332
SY+ ++D RAG
Sbjct: 333 FSYSTIIDCLCRAG 346
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 95/179 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + +K +A + E+L+ CIPT TY LL + G + +++F++M +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ +N+ +DG K G+ +A +F M+ C P +Y +I K A
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEA 281
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+L EM P+I +Y L++ +++ G + A ++F ++ +G+EPD ++Y+ +++
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + +K + + + ++L C+P T+ LL +C G + +A +F EMR G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP V YN+ I G+ G P +A + + M R P +Y ++I+ Y K+ A+
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF E+ +P+ +Y+ +++ R G A +F+ + G PD L+
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377
Query: 305 RLISRMHMGCE 315
R+ CE
Sbjct: 378 CRGERLTESCE 388
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y LL+ SG + + +M G P+ Y + L + ++A +F+ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C P+ +Y+++I + K A +L NEM +PN+ TY +L++ + G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+EA ++F ++ G PD YN L+ EAYRL M GC P +YN +
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 325 VDAYGRAG 332
+ + R G
Sbjct: 199 LSGFSRKG 206
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + +A +LE+ C P +Y L++ C G +A+ + REM + G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN IDG K G A+++F + + +P +Y+ +I+ +A K A
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+F +M ++ P+ LV R E+ E+F+ + P + YN LM
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI K +A+ E++ S P +Y +L+ Y SG L+ A +F E+ K G
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P A Y++ ID L + G A +F+ M + P ++ + + +
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF M +C P I Y L+ + ++ EIF +L G PDV ++E
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Query: 305 R 305
R
Sbjct: 448 R 448
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + A + E+ S P +Y+ ++ C +G + A VF++M
Sbjct: 302 ILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIAN 361
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P A V + GL +G ++ E+FQ M + C P Y L++ KA +S
Sbjct: 362 GSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDV 421
Query: 244 LKLFNEMRSHKCKPNI 259
++F+E+ P++
Sbjct: 422 CEIFHELTERGFSPDV 437
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 46/156 (29%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
T +Y ++ + K+ + +N+M + C PN TY L+ + + EEA +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 283 EQLQGAGIEPDVYAYNALM----------------------------------------- 301
+ G P+V++Y+ L+
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L SRM + GC PD YN+++D + + G
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG 171
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY++L+ +C + EKA + EM + G PP Y S ID L K A E+
Sbjct: 400 PSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHEL 459
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ +K +C S Y +MI GKA + A+ LF+EM C PN+ Y AL++ AR
Sbjct: 460 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLAR 519
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G+ +EA ++Q G PD+ +YN ++ A ++S M +PD S
Sbjct: 520 AGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVS 579
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ A AGL E
Sbjct: 580 YNTVLGAMSHAGLFE 594
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 13/217 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P TY+ L+ A+C G + A + EM+ G+ P+A +Y I K N
Sbjct: 219 EGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVH 278
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ +F+ M+ C+P TYT +I GKA + A F+EMR C+P+ ++
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMI 338
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN----ALMEAYRLISRMH--------MGC 314
N + G ++A ++FE++ P V YN AL E+ IS + G
Sbjct: 339 NFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGI 398
Query: 315 EPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
P +Y+I++D + + E K L E+ K +P
Sbjct: 399 SPSPFTYSILIDGFCKTNRTE-KAMMLLEEMDEKGFP 434
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 17/232 (7%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS-GLLE 171
D +V+ + ++ L G+ A + E+ +CIP+ TY ++KA S +
Sbjct: 330 DTVVINNMINFL-----GKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRIS 384
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+ + F M+ G+ PS Y+ IDG K +KA+ + + M P Y +I
Sbjct: 385 EISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLI 444
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ GKA + +A +LF E++ + + Y ++ + G ++A +F+++ G
Sbjct: 445 DALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCT 504
Query: 292 PDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
P+VYAYNALM EA + RM GC PD SYNI+++ + G
Sbjct: 505 PNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTG 556
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 94/179 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 443 LIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLG 502
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ + GL + G +A+ +RM+ C P +Y +++N K A+
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 562
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ + M+ KP+ +Y ++ A + GL EEA ++ +++ G E D+ Y++++EA
Sbjct: 563 EMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEA 621
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 36/290 (12%)
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL------RLNKKWDPIVL 117
P A++ L + +VD + + + D +NV +Q + N + D
Sbjct: 71 PDAEKALEVLMLKVDHWLVREVMKT--------DVGVNVKMQFFRWAAKKRNYEHDTSTY 122
Query: 118 MSCVSIL-LIEAYGQ--KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
M+ + L ++E YG+ K + + + C+ T + +++ + ++ KA
Sbjct: 123 MALIRCLEVVEQYGEMWKMIQEMVR-------NPVCVVTPMELSDIIRMLGNAKMISKAV 175
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINL 233
A+F +++ P+A YNS I L+ G +K E++ M + C P T TY+ +I+
Sbjct: 176 AIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISA 235
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ K + A++L NEM+ + +P YT L+ F + A +FE+++ PD
Sbjct: 236 FCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPD 295
Query: 294 VYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
V+ Y L+ EAY M GC PD N M++ G+AG
Sbjct: 296 VFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAG 345
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
V ++I+ G+ A + E+ C P Y L+ +G+L++A R M
Sbjct: 474 VYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+++G P YN ++GL K G P +A+E+ MK+ +P +Y ++ A
Sbjct: 534 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLF 593
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
A KL EM + ++ TY++++ A +
Sbjct: 594 EEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ Q M R+ C + + +I + G A A+ +F +++ KC+P Y +++
Sbjct: 140 KMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIM 199
Query: 269 FAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAY----------RLISRMH-MGCEP 316
EG E+ E++ ++ G PD Y+AL+ A+ RL++ M G +P
Sbjct: 200 LMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQP 259
Query: 317 DRASYNIMV-------DAYGRAGLHE 335
Y +++ + +G GL E
Sbjct: 260 TAKIYTMLIALFFKLNNVHGALGLFE 285
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A Q S + A + +++ S C P TY ++ + G E+AE +FRE+ + G
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P A+ YNS + K GN K +++ + + + TY MI++YGK + +A+
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++EMR+ C P+ TYT ++++ + EA ++ E + AG++P + A++AL+ AY
Sbjct: 419 GLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAY 478
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
R + G +PDR +Y +M+D + R+G
Sbjct: 479 AKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSG 517
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+ + R I P ++ L+ A SG L A+ E+R+ GL P + YN+ I
Sbjct: 244 LDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISAC 303
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N + AV +F+ M C+P TY M++++G+ K+ A +LF E+ P+
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-------- 311
TY +L+ AFA+EG ++ E EQL AG + + YN ++ Y + R+
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 312 ---MGCEPDRASYNIMVDAYGR 330
MGC PD +Y +M+D+ G+
Sbjct: 424 MRAMGCTPDAVTYTVMIDSLGK 445
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 13/229 (5%)
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P+ ++SC +++IEAYG+ L ++AE L + I + L+ AY SGL EKA
Sbjct: 742 PLNILSC-RVIIIEAYGKIKLWQQAEILVKGLRQASGIDRR-IWNALIHAYAESGLYEKA 799
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
AVF M K G P+ N + L+ G + + + ++ + S T L+++
Sbjct: 800 RAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDA 859
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ KA F +K++N M++ PN+ Y ++++ + E + +++GAG +PD
Sbjct: 860 FAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPD 919
Query: 294 VYAYNALMEAYRLI-----------SRMHMGCEPDRASYNIMVDAYGRA 331
+ NAL+ Y S + G EPD +YN ++ Y R+
Sbjct: 920 LAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRS 968
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + Y +L++ P EDTY L+ YC S E+ + EM K G
Sbjct: 926 LLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRG 985
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S + K ++A +IF+ M+ Q + Y +M+ +Y A A
Sbjct: 986 LTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M+ +P I T L+ ++ G EAE + L+ + +E Y+ + +AY
Sbjct: 1046 NLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAY 1105
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDA 327
+L+ G EPD + + A
Sbjct: 1106 LKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA 1139
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y ++ C E + EM G P + N+ ++ GN + +
Sbjct: 882 LPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQ 941
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+++ + +P +TY +I +Y ++ + L NEM P + +Y +L+ A A
Sbjct: 942 VYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASA 1001
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHM-GCEPDRA 319
+ L E+A++IFE+++ + + Y+ +M+ YR L++ M G EP A
Sbjct: 1002 KAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIA 1061
Query: 320 SYNIMVDAYGRAG 332
+ +I++ +YG AG
Sbjct: 1062 TMHILMTSYGTAG 1074
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ ++ K E T +L+ + E TY ++ Y G L+ A ++ EMR G
Sbjct: 369 LLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMG 428
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV Y ID L K +A ++ + M +P+ ++ +I Y K + A
Sbjct: 429 CTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAE 488
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F+ M + KP+ Y +++ FAR G E+ ++ ++ PD Y L+ A
Sbjct: 489 NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVA 547
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ A Y E+ C P TY +++ + + +A V +M G
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + +++ I KGG A F M +P Y +M++++ ++ + L
Sbjct: 464 LKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKML 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL------------------- 285
L+ +M + +P+ Y L+ A A+E CEE EE+ + +
Sbjct: 524 CLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKAR 583
Query: 286 ---QGA---------GIEPDVYAYNALMEAYRLISRMHMG 313
QGA G +PD+ + ++M AY + + G
Sbjct: 584 CVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEG 623
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 132 KSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+S + FT L + R + P +Y LL A + L E+A+ +F EMR +
Sbjct: 967 RSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRS 1026
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y+ + GN KA + MK D +P+ T +++ YG A + A + N +
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNL 1086
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
+S + + Y+ + +A+ + G +++ G+EPD + + A L
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASL 1142
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A E+F R + + + + M+ +Y ++ + A +L + M P++ ++ L+N
Sbjct: 207 AEEVFLRFAGEGA--TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLIN 264
Query: 268 AFAREGLCEE--AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------C 314
A ++ G A ++ +++ +G+ PDV YN L+ A S + C
Sbjct: 265 ARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASEC 324
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
PD +YN MV +GR G E
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAE 345
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++A++ F+ + R P++ +++ + G+A + +A ++F +R + + A+
Sbjct: 171 RRALDAFEWLARSSA-PASRAVAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFNAM 227
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-------------LISRMHM 312
+ +AR G ++A ++ + + GI+PD+ ++N L+ A L
Sbjct: 228 MGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQS 287
Query: 313 GCEPDRASYNIMVDA 327
G PD +YN ++ A
Sbjct: 288 GLRPDVITYNTLISA 302
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 9/172 (5%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIV---------LMSCVSILLIEAYGQKSLHKKAE 139
L P ++ L+ S + L ++ D I L + ++++ Y H KAE
Sbjct: 986 LTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ + PT T +L+ +Y +G +AE V ++ L S + Y++ D
Sbjct: 1046 NLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAY 1105
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
LK G+ MKRD +P + +T I ++ A+ L ++
Sbjct: 1106 LKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ 1157
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P+ TY +++ C G LE + +F +MR+ GL P V YNS IDG K G
Sbjct: 279 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 338
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ ++ +F MK C P TY +IN Y K K A + F+EM+++ KPN+ TY+
Sbjct: 339 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 398
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L++AF +EG+ + A ++F ++ G+ P+ + Y +L+ EA++L++ M
Sbjct: 399 TLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA 458
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G + + +Y ++D +AG
Sbjct: 459 GVKLNIVTYTALLDGLCKAG 478
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ ++ + E+ D C+P TY L+ YC + +A F EM+ G
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 389
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ ID K G Q A+++F M+R P+ TYT +I+ KA A
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL N+M K NI TYTAL++ + G EAEE+F + GI P+ Y AL+ Y
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509
Query: 305 RLISRMH--MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
RM M NI D + G CS +E
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLE 551
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+ + +L + GLLE+A F MR + P A N + L K GN Q
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ F M PS TY +MI+ K + +LF +MR P++ TY +L++ +
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
+ G EE +F +++ G PD+ YN L+ Y +M + G +P+
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394
Query: 319 ASYNIMVDAYGRAGLHEG 336
+Y+ ++DA+ + G+ +G
Sbjct: 395 VTYSTLIDAFCKEGMMQG 412
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 117/238 (49%), Gaps = 11/238 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ + + A ++++ + +P E TY L+ A C +G L +A + +M + G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + +DGL K G +A E+F+ M +D P+ + YT +++ Y KA + A+
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ +M KP++ Y +++ + EE + I E+++ GI + +++AY
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 579
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
M +G E +Y +++D +AG+ E Y LS+ P
Sbjct: 580 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L + + L ++A + + + R +P + LL SG + F +M
Sbjct: 224 VLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA 283
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS YN ID L K G+ + + +F +M+ P TY +I+ YGK
Sbjct: 284 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 343
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LFNEM+ C P+I TY L+N + + A E F +++ G++P+V Y+ L++A
Sbjct: 344 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 403
Query: 304 Y-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + G P+ +Y ++DA +AG
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAG 443
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ +C LE+ + + EM+ G+ + V+ + ID K G A+
Sbjct: 532 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 591
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ M+ + + TY ++I+ KA +A+ F M S +PN+ YT+L++ +
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
E A+++F+++Q G+ PD+ A+ AL+ EA LISRM + E D
Sbjct: 652 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 711
Query: 321 YNIMVDAYGRAG-LHEGK 337
Y +V + + G LH+ +
Sbjct: 712 YTSLVSGFSQCGELHQAR 729
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 110/274 (40%), Gaps = 70/274 (25%)
Query: 139 EFTYLELLDSRCIP---TED-----------------TYALLLKAYCMSGLLEKAEAVFR 178
EFTY L+D+ C TE TY LL C +G + +AE VFR
Sbjct: 429 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 488
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------- 227
M K G+ P+ VY + + G +K + A++I ++M +P Y
Sbjct: 489 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 548
Query: 228 ------------------------TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
T +I+ Y KA KS AL F EM+ + I TY
Sbjct: 549 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 608
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
L++ + G+ E A + F ++ G++P+V Y +L++ A +L M
Sbjct: 609 VLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR 668
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELS 346
G PD ++ ++D L G +LV +S
Sbjct: 669 GMTPDITAFTALID----GNLKHGNLQEALVLIS 698
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+S +I+AY + A + E+ D T TY +L+ C +G++E A F M
Sbjct: 571 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRM 630
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
GL P+ VY S IDGL K + A ++F M+ P +T +I+ K
Sbjct: 631 LSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 690
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL L + M + ++ YT+LV+ F++ G +A + F ++ GI P+ L
Sbjct: 691 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICL 750
Query: 301 MEAY 304
+ Y
Sbjct: 751 LREY 754
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C + +E A+ +F EM+ G+ P + + IDG LK GN Q+A+ +
Sbjct: 637 PNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 696
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + YT +++ + + + A K FNEM P L+ + +
Sbjct: 697 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 756
Query: 272 EGLCEEAEEIFEQLQGAGI 290
G +EA E+ +++ G+
Sbjct: 757 RGQLDEAIELKNEMERMGL 775
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C + + ++ +++ + A + F+ MR+ + P + L++ ++ G +
Sbjct: 212 RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQ 271
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMV 325
+ F + GAGI P V+ YN +++ + RL +M MG PD +YN ++
Sbjct: 272 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 331
Query: 326 DAYGRAG 332
D YG+ G
Sbjct: 332 DGYGKVG 338
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + +AE Y +++D C+P TY L G + A+ V+ EM
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAA 546
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + Y++ I G +A E+F+ M C+P+ TY +++ K SK A
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF +M C P+ TYT L+ F G E+A E+F+++ G +PDV AYN L+
Sbjct: 607 HELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA +L M C+PD S+NIM+D +A
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKA 705
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ ++S +A + ++++ C P TY LL +C G +E+A VF EM G
Sbjct: 593 LLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 652
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN + G + G P +A ++FQ M C+P T ++ +MI+ KA + A+
Sbjct: 653 HDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAV 712
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F M + H C P++ TY +L+ E EA ++F+++ + PD +A+N L+EA
Sbjct: 713 EVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
Query: 304 YR--LISRMHMGCEPDRASYNIMVDAYGRAG 332
+ ++ + + + D ++N++++A AG
Sbjct: 773 IKCGIVYQFEIRFK-DPPAFNVLMEAMHAAG 802
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y++L+ +C L +AE ++++M P+ YN++++GL++ G A
Sbjct: 479 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+++ M C P TY+ +I+ + A K A +LF M S C+PN TY L++
Sbjct: 539 VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
+E +EA E+F ++ G +PD Y L+ + + ++ G +PD
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658
Query: 320 SYNIMVDAYGRAG 332
+YN ++ + RAG
Sbjct: 659 AYNCLLKGFFRAG 671
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 21/259 (8%)
Query: 88 SLPPTHATWDDLINVSVQL----RLNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKA 138
S P ++ LI+ ++ R K + ++ ++CV + + +K A
Sbjct: 477 SFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA 536
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ Y E++ + C P TY+ L+ + ++ ++A +F M G P+AV YN + G
Sbjct: 537 QGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHG 596
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K P +A E+F++M C P TYT ++ + K A+++F+EM S P+
Sbjct: 597 LCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ Y L+ F R G EA+++F+ + +PD ++N ++ +A +
Sbjct: 657 VVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFE 716
Query: 309 RMHM--GCEPDRASYNIMV 325
RM GC PD +YN ++
Sbjct: 717 RMEQDHGCSPDLVTYNSLI 735
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 51/239 (21%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE LE+ P+ T +++ C +G ++ A ++ M K G P ++ I
Sbjct: 357 KAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLI 416
Query: 197 DGLLKGGNPQKAVEIFQRMKR-----------------DCCQ------------------ 221
+ L K Q+A E Q M R C+
Sbjct: 417 NELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSER 476
Query: 222 ---PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
P +Y+++I+ + K + A KL+ +M C PN+ TY A +N R+G +A
Sbjct: 477 SFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA 536
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------------MGCEPDRASYNIMV 325
+ ++E++ AG PDV Y+ L+ + L +R H GC P+ +YN ++
Sbjct: 537 QGVYEEMVAAGCSPDVITYSTLIHGFSL-ARKHDQAHELFETMISRGCRPNAVTYNCLL 594
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 51/233 (21%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
++ Y +L++ SG ++KAE E+ + PS+ +S I L K G A+ +
Sbjct: 338 SQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLL 397
Query: 213 QRM-KRDCCQPSTETYTLMIN--------------LYG---------------------- 235
+ M KR C P T++++IN L G
Sbjct: 398 ETMIKRGYC-PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSL 456
Query: 236 -KASKSFMALKLFNEMRSHKC-KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
KA K A +F+ M S + P++ +Y+ L++ F + AE++++Q+ P+
Sbjct: 457 CKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 516
Query: 294 VYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
V YNA + R+ GC PD +Y+ ++ + A H+
Sbjct: 517 VTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 142 YLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+LE+ ++S+ + L C SG +E+A R M++ L S VY+ I L+
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLI 350
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G KA E + QPS+ T +I KA + AL L M P++
Sbjct: 351 ESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMA 410
Query: 261 TYTALVNAFAREGLCEEAEEIFEQL--QGAGIEPDVYAYNALM----------EAYRLIS 308
T++ L+N + +EA+E + + + + ++YN+L+ +A+ + S
Sbjct: 411 THSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFS 470
Query: 309 RM--HMGCEPDRASYNIMVDAY 328
M PD SY+I++D +
Sbjct: 471 TMVSERSFVPDVVSYSILIDGF 492
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A + +++ +P TYA+L+++ C ++A F EM G PS+ +Y
Sbjct: 146 KQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKV 205
Query: 196 IDGLLKGGNPQKAVEIFQR-MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ L G + +F R +++ L++N + K+ A KLF M
Sbjct: 206 TECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQ-DKAIEASKLFRAMVKSG 264
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
CKP+ Y+ +V A + +EA ++F ++
Sbjct: 265 CKPDATIYSYMVLAHCKLENLDEAFKLFLEM 295
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 11/168 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A FR ++ YN +D L++ + ++A ++F++M P+ TY +++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF--------- 282
S A++ F EM KP+ Y + G E +F
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 283 -EQLQGAGIEPDVYAYNALMEAYRLISRM-HMGCEPDRASYNIMVDAY 328
E + + + + +EA +L M GC+PD Y+ MV A+
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAH 279
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 141/283 (49%), Gaps = 24/283 (8%)
Query: 83 WDAF-----DSLPPTHATWDDLINVSVQ-------LRLNKKWDPIVLMSCVSILLIEAYG 130
WD + + + P T+D L++ S + L L K + L ++I A+
Sbjct: 50 WDVYYQMLAEGIDPDDVTYDILVSGSGKNGYPIDRLFLEIKSRGVALTLRSYNVVICAFT 109
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
++ K E E++ P ++ L+ AY MS E+ VF M+ G+ P V
Sbjct: 110 KEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIV 169
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y + I + ++A+E+F+ M + CQP Y+L++++YGKA AL +F+ +
Sbjct: 170 TYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRL 229
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
+ +PNI TYT+L++A +GL EE+ + F Q++ G DV+ N +++AY
Sbjct: 230 QLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMV 289
Query: 305 ----RLISRMH-MGCEPDRASYNIMVDAYGRAG-LHEGKCSYS 341
L+ R+ G P+RASY I+V+ + AG + E +Y+
Sbjct: 290 NDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAYA 332
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY Q K A Y ++L P + TY +L+ +G + +F E++ G
Sbjct: 36 MIAAYYQAKRPKDAWDVYYQMLAEGIDPDDVTYDILVSGSGKNGY--PIDRLFLEIKSRG 93
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + YN I K G+ K E+ + M R +P ++ +I Y + K L
Sbjct: 94 VALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGL 153
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F+ M++ P+I TYT L+ F+R + +EA E+FE++
Sbjct: 154 QVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEM------------------- 194
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
++++ C+PD Y+++V YG+AGL
Sbjct: 195 -VVNK----CQPDFFVYSLLVSVYGKAGL 218
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + ++HK+A + E++ ++C P Y+LL+ Y +GL+ A +F ++ G
Sbjct: 174 LIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEG 233
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y S I L G +++ + F +M+ C+ MI+ Y KA A
Sbjct: 234 HRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAA 293
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
L + + + PN +Y +V F G +EA + + AG + +
Sbjct: 294 NLLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAYASMSEAGFKDE 342
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 9/169 (5%)
Query: 91 PTHATWDDLINVSVQLRLNKK----WDPIVLMSC-----VSILLIEAYGQKSLHKKAEFT 141
P T+ LI + + ++K+ ++ +V+ C V LL+ YG+ L A
Sbjct: 166 PDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLI 225
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ L P TY L+ A+ GLLE++ F +M YG + N+ ID K
Sbjct: 226 FHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAK 285
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
G A + R+ P+ +Y +++ + A AL + M
Sbjct: 286 AGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAYASM 334
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 17/268 (6%)
Query: 64 PTAQQILRFVQ---REVDSNTIWDAFDSLP-----PTHATWDDLINVSVQLRLNKKWDPI 115
PT + + + R+ + D FD + PT T++ LI V+ R +K + I
Sbjct: 191 PTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQI 250
Query: 116 V---LMSCVS------ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
+ ++ VS ++ Y KA + +L D TY LLKA C
Sbjct: 251 LDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCK 310
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
SG ++ A AV +EM +P + +YN IDG + G+ +A ++ Q+MKR+ QP T
Sbjct: 311 SGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHT 370
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
YT IN KA A K EM+S KPN+ TYT L+N +AR L E+A FE+++
Sbjct: 371 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 430
Query: 287 GAGIEPDVYAYNALMEAYRLISRMHMGC 314
+G++PD Y+ LM + + + GC
Sbjct: 431 LSGLKPDRAVYHCLMTSLLSRATVAHGC 458
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ AYC ++KAEA+ REM + G+ +Y++ +DG G+ K + +F+R K
Sbjct: 21 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFK 80
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
PS TY +INLY K K AL++ EM K N+ TY+ L+N F +
Sbjct: 81 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 140
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
A IFE L GI+PDV YN ++ A+ + +M
Sbjct: 141 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKM 174
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A A+F ++ K G+ P V+YN+ I G +AV + M
Sbjct: 125 TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEM 184
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ +P+T T+ +I+ + + + AL +F+ MR C P + TY AL+ +
Sbjct: 185 QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM 244
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+AE+I +++ AG+ P+ + Y +M Y
Sbjct: 245 EKAEQILDEMTLAGVSPNEHTYTTIMHGY 273
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 46/257 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ +A T E+ R PT T+ ++ + G ++KA VF MR G
Sbjct: 164 IITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSG 223
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKSF 241
P+ YN+ I GL++ +KA +I M P+ TYT +++ Y G K+F
Sbjct: 224 CIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAF 283
Query: 242 M--------------------------------ALKLFNEMRSHKCKPNICTYTALVNAF 269
AL + EM + N Y L++ +
Sbjct: 284 AYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGW 343
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDR 318
AR G EA ++ +Q++ G++PD++ Y + + A + I M +G +P+
Sbjct: 344 ARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNV 403
Query: 319 ASYNIMVDAYGRAGLHE 335
+Y +++ + RA L E
Sbjct: 404 KTYTTLINGWARASLPE 420
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAE 139
L P+ T+ LIN+ +L +++K + M I +LI + + A
Sbjct: 84 LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAF 143
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ +L+ P Y ++ A+C G +++A +EM+K P+ + I G
Sbjct: 144 AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGF 203
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ G +KA+++F M+ C P+ TY +I + K A ++ +EM PN
Sbjct: 204 ARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNE 263
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA 319
TYT +++ +A G +A F +L+ G++ DVY Y AL++A RM +
Sbjct: 264 HTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKE 323
Query: 320 S-----------YNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 324 MSAQNIPRNTFIYNILIDGWARRG 347
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + +AE Y +++D C+P TY L G + A+ V+ EM
Sbjct: 162 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISA 221
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + Y++ I G +A E+F+ M C+P+ TY +++ K SK A
Sbjct: 222 GCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEA 281
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF +M C P+ TYT L+ F G E+A E+F+++ G +PDV AYN L+
Sbjct: 282 HELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 341
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA +L M C+PD S+NIM+D +A
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKA 380
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 1/180 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ ++S +A + ++++ C P + TY LL +C G +E+A VF EM G
Sbjct: 268 LLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 327
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN + G + G P +A ++FQ M C+P T ++ +MI+ KA + A+
Sbjct: 328 HDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAV 387
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F M + H C P++ TY +L+ E EA ++F+++ + PD +A+N L+EA
Sbjct: 388 EVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 88 SLPPTHATWDDLINVSVQL----RLNKKWDPIVLMSCV-SILLIEAYGQKSLHK----KA 138
S+ P ++ LI+ ++ R K + ++ ++CV ++ A+ + K A
Sbjct: 152 SVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA 211
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ Y E++ + C P TY+ L+ + ++ ++A +F M G P+AV YN + G
Sbjct: 212 QGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHG 271
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K P +A E+F++M C P TYT ++ + K A+++F+EM S P+
Sbjct: 272 LCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 331
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ Y L+ F R G EA ++F+ + +PD ++N ++ +A +
Sbjct: 332 VVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFE 391
Query: 309 RMHM--GCEPDRASYNIMVDAYGRAG 332
RM GC PD +YN ++ +G G
Sbjct: 392 RMEQDHGCSPDLVTYNSLI--FGLCG 415
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+++ C +G ++ A ++ M K G P ++ I+ L K Q+A E Q M R
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114
Query: 220 CQPSTE--TYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFAREGLCE 276
++ +Y ++N KA K A +F+ M S + P++ +Y+ L++ F +
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMV 325
AE++++Q+ P+V YNA + R+ GC PD +Y+ ++
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234
Query: 326 DAYGRAGLHE 335
+ A H+
Sbjct: 235 HGFSLARKHD 244
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 19/194 (9%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY---NSYIDGLLKGGNPQKAVEIFQ 213
+ L C SG +E+A R M++ +S I L K G A+ + +
Sbjct: 14 WTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLE 73
Query: 214 RM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNIC-TYTALVNAFA 270
M KR C P T++++IN KA K A + M R+ + + C +Y +L+N+
Sbjct: 74 TMIKRGYC-PDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132
Query: 271 REGLCEEAEEIFEQLQGA-GIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
+ +A IF + + PDV +Y+ L++ + I + + C P+
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192
Query: 319 ASYNIMVDAYGRAG 332
+YN ++ R G
Sbjct: 193 TTYNAFLNGLMRKG 206
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLH-KKAEFTYLELLDSRCIPTE 154
++D++ +Q D I L + L+ G+ L + AE + ++ ++ +P
Sbjct: 68 YEDMVESGIQA------DEITLST-----LLSGVGKTQLPVETAEKIFSKIKENGILPRV 116
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+TY LL G E+ + + EM++ + P+ + +N+ + ++GG ++A E++QR
Sbjct: 117 ETYNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQR 176
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+ +P+ TYT ++ +Y +ASK A+++F EMR CKP++ Y+ +++ + + G
Sbjct: 177 ILDAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGS 236
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
EEA +F QLQ G P+V + L++A+ +M GC PD YN+
Sbjct: 237 AEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNV 296
Query: 324 MVDAYGRAG 332
M+ AYGR G
Sbjct: 297 MMGAYGRYG 305
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A Y +LD+ PT TY L++ YC + ++A VF EMR+ G P ++Y+
Sbjct: 168 KEAAEVYQRILDAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLM 227
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I K G+ ++A +F++++ D P+ T+ +I +G K FNEM + C
Sbjct: 228 ISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGC 287
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
P++ Y ++ A+ R G +A +F ++Q GI P+ +Y+ +++AY C
Sbjct: 288 LPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTMIQAY---------CH 338
Query: 316 PDRAS-YNIMVDAYGRAGLHEGKCSYSLV 343
+A+ I++D RAG + S +++
Sbjct: 339 SKQAADAQIVLDQMTRAGFSPDRSSRAML 367
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + S HK+A +LE+ C P Y+L++ Y +G E+A VFR+++ G
Sbjct: 192 LVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDG 251
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V + I G Q+ F M C P Y +M+ YG+ S A
Sbjct: 252 YIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAA 311
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF M++ PN +Y ++ A+ +A+ + +Q+ AG PD
Sbjct: 312 ILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPD 360
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 47/234 (20%)
Query: 149 RCIPTEDTYALLL-----------------------------------KAYCMSGLLEKA 173
R P TY L+L AY GL +KA
Sbjct: 5 RLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKA 64
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMIN 232
++ +M + G+ + ++ + G+ K P + E IF ++K + P ETY +++
Sbjct: 65 WRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLS 124
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ + + +L EM+ + PNI T+ L+ + G +EA E+++++ AG++P
Sbjct: 125 VLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKP 184
Query: 293 DVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
V Y L++ Y + +GC+PD Y++M+ YG+AG E
Sbjct: 185 TVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAE 238
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 72/137 (52%), Gaps = 13/137 (9%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+P+ TYTL++ + G+A + A +LF+EM S + + ++ +++ A+AR+GL ++A
Sbjct: 7 KPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWR 66
Query: 281 IFEQLQGAGIEPDVYAYNALME-----------AYRLISRM-HMGCEPDRASYNIMVDAY 328
++E + +GI+ D + L+ A ++ S++ G P +YN ++
Sbjct: 67 MYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVL 126
Query: 329 GRAGLHEGKCSYSLVEL 345
R G H +C +E+
Sbjct: 127 SRGG-HTERCKELEIEM 142
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 11/186 (5%)
Query: 82 IWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVL----MSC-----VSILLIEAYGQK 132
I DA L PT T+ L+ + + +K+ + L + C + L+I YG+
Sbjct: 177 ILDA--GLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKA 234
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
++A + +L + IP T+ L++A+ G +++ A F EM G P +Y
Sbjct: 235 GSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLY 294
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N + + G+ +A +F+RM+ P+ +Y MI Y + ++ A + ++M
Sbjct: 295 NVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTR 354
Query: 253 HKCKPN 258
P+
Sbjct: 355 AGFSPD 360
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 109 NKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
N + P V+ C LI+A+G + ++ + E+L S C+P Y +++ AY G
Sbjct: 249 NDGYIPNVVTWCC---LIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYG 305
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+A +FR M+ G+ P+AV Y++ I A + +M R P +
Sbjct: 306 HSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPDRSSRA 365
Query: 229 LM 230
++
Sbjct: 366 ML 367
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 29/217 (13%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P + TY+ ++ C + +EKA +F EM+K G+ PS Y ID K G
Sbjct: 443 EMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAG 502
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q+A F M RD C P+ TYT +I+ Y KA K F A KLF M KPN+ TYT
Sbjct: 503 LIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYT 562
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIE-----------------PDVYAYNALM----- 301
AL++ + G ++A +I+ ++QG IE P++ Y AL+
Sbjct: 563 ALIDGHCKAGQIDKACQIYARMQG-DIESSDIDMYFKLDDNDCETPNIITYGALVDGLCK 621
Query: 302 -----EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA+ L+ M + GCEP++ Y+ ++D + + G
Sbjct: 622 ANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG 658
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E+L C P TY L+ AY + + A +F M
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE 552
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK----------------RDCCQPSTETY 227
G P+ V Y + IDG K G KA +I+ RM+ DC P+ TY
Sbjct: 553 GSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITY 612
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA++ A +L + M + C+PN Y AL++ F + G E A+E+F ++
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P++Y Y++L+ E
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AYRL+ +M +GC P+ +Y M+D +G+ G
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIG 763
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 142 YLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y +L D+ C P TY L+ C + +E+A + M G P+ +VY++ IDG
Sbjct: 596 YFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFC 655
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G + A E+F +M P+ TY+ +IN K + + LK+ ++M + C PN+
Sbjct: 656 KTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVV 715
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-------- 312
YT +++ + G EEA + +++ G P+V Y A+++ + I ++
Sbjct: 716 IYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDM 775
Query: 313 ---GCEPDRASYNIMVDAYGRAGL 333
GC P+ +Y ++++ GL
Sbjct: 776 CSKGCAPNFITYRVLINHCCSTGL 799
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 48/241 (19%)
Query: 144 ELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG--------------- 184
ELLD+ C P + Y L+ +C +G LE A+ VF +M + G
Sbjct: 630 ELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSL 689
Query: 185 --------------------LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
P+ V+Y IDGL K G ++A + +M+ C P+
Sbjct: 690 FKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNV 749
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TYT MI+ +GK K L+L+ +M S C PN TY L+N GL +EA + ++
Sbjct: 750 ITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDE 809
Query: 285 LQGAGIEPDVYAYNALMEAY--RLISRMHMGCE-------PDRASYNIMVDAYGRAGLHE 335
++ + +Y ++E + I+ + + E P + Y I++D + +AG E
Sbjct: 810 MKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLE 869
Query: 336 G 336
G
Sbjct: 870 G 870
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L + AE Y E+LD + + + + C +G +KA + EM G P Y+
Sbjct: 398 LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I L +KA +F+ MK++ PS TYT++I+ + KA A F+EM
Sbjct: 458 KVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD 517
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
C PN+ TYT+L++A+ + +A ++FE + G +P+V Y AL++ + ++
Sbjct: 518 NCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKA 577
Query: 314 CE 315
C+
Sbjct: 578 CQ 579
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 17/206 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ + + L+ A V REM G + L K G A+ + ++
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKE 266
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P T Y M++ +AS A+ + + MRS C PN+ TY L++ +G
Sbjct: 267 EF---VPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQL 323
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIM 324
+ I + G P+ +N+L+ AY+L +M GC+P YNI
Sbjct: 324 GRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIF 383
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKHY 350
+ G +E L+EL+ K Y
Sbjct: 384 I---GSICSNEELPGSDLLELAEKAY 406
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 96/253 (37%), Gaps = 62/253 (24%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL +K EF +P Y ++ C + L ++A + MR P+ V Y
Sbjct: 261 SLLEKEEF----------VPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTY 310
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ G L G + I M + C P+ E + +++ Y K+ A KLF +M
Sbjct: 311 RILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIK 370
Query: 253 HKCKP----------NICTYTAL---------------------------VNAFAR---- 271
C+P +IC+ L V+ FAR
Sbjct: 371 CGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCG 430
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G ++A EI ++ G PD Y+ ++ +A+ L M G P +
Sbjct: 431 AGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYT 490
Query: 321 YNIMVDAYGRAGL 333
Y I++D++ +AGL
Sbjct: 491 YTILIDSFCKAGL 503
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 52/259 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ + SL ++A + CIP TY +LL G L + + + M G
Sbjct: 278 MVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEG 337
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI------------N 232
P+ ++NS + K + A ++F++M + CQP Y + I +
Sbjct: 338 CYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSD 397
Query: 233 LYGKASKSF-----------------------------MALKLFNEMRSHKCKPNICTYT 263
L A K++ A ++ EM S P+ TY+
Sbjct: 398 LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISR--------MHM 312
++ E+A +FE+++ GI P VY Y L++++ LI + +
Sbjct: 458 KVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD 517
Query: 313 GCEPDRASYNIMVDAYGRA 331
C P+ +Y ++ AY +A
Sbjct: 518 NCTPNVVTYTSLIHAYLKA 536
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+ N I + G A+E R+K + S TY +I ++ +A K A + EM
Sbjct: 172 LLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREM 231
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
+ + + CT + + G C +A + E+ + PD YN ++
Sbjct: 232 SNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEE---FVPDTVFYNRMVSGLCEASLF 288
Query: 302 -EAYRLISRMH-MGCEPDRASYNIMVDA-YGRAGLHEGKC 338
EA ++ RM + C P+ +Y I++ G+ L G+C
Sbjct: 289 QEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQL--GRC 326
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+AY + +A F L+ + S+ + P +Y +++ C G +++A + EM
Sbjct: 51 LIDAYCKMGRIDEA-FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK 109
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ ++G K GN +A+ I M R+ PS TYT +IN KA A
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ F++MR +PN TYT L++ F+R+GL EA I ++ +G P V YNA +
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ ++ RM G PD SY+ ++ + R G
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +K + E+ + C+P TY L+ AYC G +++A + + M
Sbjct: 15 ILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK 74
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ + YN I+GL + G+ ++A EI + M P TY ++N Y K A
Sbjct: 75 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 134
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L + EM + P++ TYTAL+N+ + A E F+Q++ G+ P+ Y L+
Sbjct: 135 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
EAYR+++ M G P +YN + +
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 230
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ SR P TY +L++ +C G L+K F EM + G P+ V YN+ ID K G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A + + M QP+ +Y ++IN + A ++ EM P+ TY
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-G 313
L+N + +EG +A I ++ G+ P V Y AL+ A +M + G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 314 CEPDRASYNIMVDAYGRAGL 333
P+ +Y ++D + R GL
Sbjct: 181 LRPNERTYTTLIDGFSRQGL 200
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y ++ +A + E++ + P+ TY L+ + C + L +A F +MR G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ Y + IDG + G +A I M PS TY I+ + + AL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM P++ +Y+ +++ F R+G + A ++ +++ G+ PD Y++L++
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAY 328
+ R + MG PD +Y +++AY
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 335
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 20/260 (7%)
Query: 87 DSLPPTHATWDDLINVSVQLR-LNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKK 137
+ + P+ T+ LIN + R LN+ + M + LI+ + ++ L +
Sbjct: 144 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 203
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A E+ +S P+ TY + +C+ +E+A V +EM + GL P V Y++ I
Sbjct: 204 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 263
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + G +A ++ Q M P TY+ +I + + A L EM P
Sbjct: 264 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 323
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TYT L+NA+ EG +A + +++ G PD Y+ L+ EA RL+
Sbjct: 324 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 383
Query: 308 SRM-HMGCEPDRASYNIMVD 326
++ + P +Y+ +++
Sbjct: 384 FKLIYEESVPSDVTYDTLIE 403
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 26/237 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + +K +A E+++ P TY+ L++ C L +A + +EM G
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
LPP Y + I+ G+ KA+ + M P TY+++IN K +++ A
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380
Query: 245 KLFNEMRSHKCKPNICTY---------------TALVNAFAREGLCEEAEEIFEQLQGAG 289
+L ++ + P+ TY AL+ F +GL EA+ +FE +
Sbjct: 381 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+P YN ++ +A+ L M H G P + ++ A + G++E
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNE 497
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 27/196 (13%)
Query: 88 SLPPTHATWDDLINV-SVQLRLNKKW---DPIV----LMSCVSI-LLIEAYGQKSLHKKA 138
LPP T+ LIN V+ LNK D ++ L V+ +LI +++ ++A
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379
Query: 139 EFTYLELLDSRCIPTEDTY---------------ALLLKAYCMSGLLEKAEAVFREMRKY 183
+ +L+ +P++ TY L+K +CM GL+ +A+ VF M +
Sbjct: 380 KRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVER 439
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFM 242
P VYN I G +GGN KA +++ M P T T TL+ L+ + M
Sbjct: 440 NHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 499
Query: 243 ALKLFNEMRSHKCKPN 258
+ + + +RS C+ N
Sbjct: 500 SEVIGDTLRS--CRLN 513
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC 150
P+ T+D LI + I S V+ LI+ + K L +A+ + +++
Sbjct: 393 PSDVTYDTLI---------ENCSNIEFKSVVA--LIKGFCMKGLMHEADRVFESMVERNH 441
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P E Y +++ +C G L KA +++EM G P V + I L K G ++ E
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSE 501
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL---KLFNEMRSHKC 255
+ R C E +++ + K L +L+N++ S KC
Sbjct: 502 VIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNKL-SLKC 548
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 133/269 (49%), Gaps = 29/269 (10%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSL 134
L PT T++ +++V ++ + W+ I+ + +C ++ I A G++ L
Sbjct: 240 LSPTLVTYNVMLDVYG--KMGRSWNKILGLLDEMRSKGLGFDEFTCSTV--ISACGREGL 295
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A+ ++ L P TY LL+ + +G+ +A ++ +EM PP AV YN
Sbjct: 296 LDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNE 355
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ ++ G ++ + M + +P+ TYT MIN YG+A++ AL L+++M+
Sbjct: 356 LVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESG 415
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------AYRLIS 308
C PN+CTY A++ ++ EE +I ++ G P+ +N ++ ++ +
Sbjct: 416 CAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVK 475
Query: 309 RMHM-----GCEPDRASYNIMVDAYGRAG 332
R+ G EPDR ++N ++ A GR G
Sbjct: 476 RVFQEMKSCGFEPDRDTFNTLITASGRCG 504
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ ++ +A E+ D+ C P TY L+ AY +G E+ A+ M + G
Sbjct: 321 LLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+AV Y + I+ + KA+ ++ +MK C P+ TY ++ + GK S+S +
Sbjct: 381 IKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMM 440
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
K+ +M+ C PN T+ +++ +G+ + + +F++++ G EPD +N L
Sbjct: 441 KILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITAS 500
Query: 301 ------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++A ++ M G P A+YN +++A R G
Sbjct: 501 GRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRG 539
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 47/254 (18%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G K +HK + + E+ P DT+ L+ A G AE ++ EM + G PS
Sbjct: 466 GNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSV 525
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS----------- 238
YN+ ++ L + G+ + A + + MK +PS +Y+L++N Y K
Sbjct: 526 ATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKD 585
Query: 239 -------KSFMALKL-----------------FNEMRSHKCKPNICTYTALVNAFAREGL 274
S+M L+ F ++ H KP++ + ++++ F+R+ +
Sbjct: 586 IYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNM 645
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNI 323
+ A EI +Q G++PD+ YN+LM+ Y L + G + D SYN
Sbjct: 646 HDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNT 705
Query: 324 MVDAYGRAGL-HEG 336
++ + R GL HE
Sbjct: 706 VIKGFCRQGLMHEA 719
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 108/265 (40%), Gaps = 59/265 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTED------TYALLLKAYCMSGLLEKAEAVF 177
L+ G++S H A +L D IP +D Y +L +Y G E+A A+F
Sbjct: 179 LMARILGRESQHSIAS----KLFD--VIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIF 232
Query: 178 REMRKYGLPPSAVVYNSYID-------------GLL-----------------------K 201
+M + GL P+ V YN +D GLL +
Sbjct: 233 EKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGR 292
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A E F +K P T TY ++ ++GKA AL + EM + C P+ T
Sbjct: 293 EGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVT 352
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM- 310
Y LV A+ R G EE + + + GI+P+ Y ++ AY L +M
Sbjct: 353 YNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMK 412
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHE 335
GC P+ +YN ++ G+ E
Sbjct: 413 ESGCAPNVCTYNAILGMLGKKSQSE 437
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 118/273 (43%), Gaps = 19/273 (6%)
Query: 43 LRGKGWKYGSGFVDGIFPVLSPTA--QQILRFVQREVDSNTIWDAFDSLPPTHATWDDLI 100
L+ +G+ G+ + + V + L ++ D+N PP T+++L+
Sbjct: 306 LKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNC--------PPDAVTYNELV 357
Query: 101 NVSVQLRLNKKWDPIVLM---------SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
V+ ++ ++ + +I AYG+ + KA Y ++ +S C
Sbjct: 358 AAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCA 417
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L E+ + +M+ G P+ + +N+ + G + +
Sbjct: 418 PNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRV 477
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ MK +P +T+ +I G+ A K+++EM P++ TY AL+NA AR
Sbjct: 478 FQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALAR 537
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G AE + + ++ G +P +Y+ ++ +Y
Sbjct: 538 RGDWRTAESVIKDMKNKGFKPSETSYSLILNSY 570
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 28/281 (9%)
Query: 76 EVDSNTIWDAF--DSLPPTHATWDDLINV------------SVQLRLNKKWDPIVLMSCV 121
++D+ I+D P+ AT++ L+N ++ NK + P
Sbjct: 506 DIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKP---SETS 562
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
L++ +Y + K ++ D P+ L+ A L E F+ ++
Sbjct: 563 YSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQ 622
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+G P VV+NS + + +A EI ++ QP TY +++LY + + +
Sbjct: 623 KHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECW 682
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++ E+++ K ++ +Y ++ F R+GL EA ++ GI P + YN +
Sbjct: 683 KAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFV 742
Query: 302 EAY----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
Y ++S M C P+ +Y I+VD Y +A
Sbjct: 743 GGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKA 783
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 46/259 (17%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C ++ G+KS ++ ++ C P T+ +L G+ + + VF+E
Sbjct: 421 CTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQE 480
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G P +N+ I + G+ A +I+ M PS TY ++N +
Sbjct: 481 MKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGD 540
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI------------------ 281
A + +M++ KP+ +Y+ ++N++A+ G + I
Sbjct: 541 WRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRT 600
Query: 282 -----------------FEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----G 313
F+ LQ G +PD+ +N+++ + R MH+ G
Sbjct: 601 LILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECG 660
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +YN ++D Y R G
Sbjct: 661 LQPDLVTYNSLMDLYARGG 679
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D +V S +S+ + +K++H +A + + P TY L+ Y G
Sbjct: 627 KPDLVVFNSMLSM-----FSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGEC 681
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
KAE + RE++ G + YN+ I G + G +A+ M +P TY
Sbjct: 682 WKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTF 741
Query: 231 INLYGKASKSFMAL--KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+ G A+K A ++ + M H C+PN TY +V+ + + +EA
Sbjct: 742 VG--GYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEA 789
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+ KS + + + +S P+ TY++L+ +C + +EKA + EM + G PP
Sbjct: 1371 FESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPC 1430
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
Y S ID L K A E+FQ +K +C S Y +MI GKA + A+ +F+
Sbjct: 1431 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFD 1490
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------- 301
EM C P++ Y AL++ AR G+ +EA ++Q G PD+ +YN ++
Sbjct: 1491 EMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTG 1550
Query: 302 ---EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
A ++S M PD SYN ++ A AG+ E
Sbjct: 1551 GPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFE 1588
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 52/287 (18%)
Query: 100 INVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYA 158
I + Q++ +K PI I+++ GQ ++K Y E+ + C P TY+
Sbjct: 1169 ITIFYQIK-TRKCQPIAQAYNSMIIMLMHEGQ---YEKVHQLYNEMSTEGHCFPDTVTYS 1224
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV--------------------------- 191
L+ A+C G + A + EM++ G+ P+ +
Sbjct: 1225 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 1284
Query: 192 --------YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
Y I GL K G +A F M+R+ C+P T MIN GKA + A
Sbjct: 1285 YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 1344
Query: 244 LKLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+KLF EM + +C P++ TY ++ A F + E FE+++ +GI P + Y+ L++
Sbjct: 1345 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 1404
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
+ +RM G P A+Y ++DA G+A ++ C
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 1451
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 1437 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 1496
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + GL + G +A+ +RM+ C P +Y +++N K A+
Sbjct: 1497 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 1556
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ + M+ +P++ +Y ++ A + G+ EEA ++ +++ G E D+ Y++++EA
Sbjct: 1557 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA 1615
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTA 264
++A+ IF ++K CQP + Y MI + + +L+NEM + C P+ TY+A
Sbjct: 1166 RQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSA 1225
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L++AF + G + A ++ +++ G++P Y L+ A L M H
Sbjct: 1226 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 1285
Query: 314 CEPDRASYNIMVDAYGRAG 332
C PD +Y ++ G+AG
Sbjct: 1286 CRPDVFTYTELIRGLGKAG 1304
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ Q M R+ C + + ++ + G A A+ +F ++++ KC+P Y +++
Sbjct: 1134 KMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIM 1193
Query: 269 FAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAY----------RLISRM-HMGCEP 316
EG E+ +++ ++ G PD Y+AL+ A+ +L++ M +G +P
Sbjct: 1194 LMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQP 1253
Query: 317 DRASYNIMV-------DAYGRAGLHE 335
Y +++ DA+G L E
Sbjct: 1254 TTKIYTMLIALFFKFNDAHGALSLFE 1279
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 51/117 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + +A T + + CIP ++Y ++L +G +A + M++
Sbjct: 1507 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 1566
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ P V YN+ + L G ++A ++ + M + TY+ ++ GK +
Sbjct: 1567 VRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHEY 1623
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE +++L C E T+ +L+ + C +G + A VF +M KYG P V Y+S I+
Sbjct: 435 AEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLIN 494
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL + G + A+E+FQ M C+P Y ++ +A++ A +L + M C P
Sbjct: 495 GLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPP 551
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N T+ L+N+ ++GL + A E+FEQ+ G PD++ YNAL+ +A RL+
Sbjct: 552 NEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLL 611
Query: 308 SRMHMGCEPDRASYNIMVDAYGRA 331
S M C+PD SYN + RA
Sbjct: 612 S--TMSCKPDAVSYNSALKGLCRA 633
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 46/234 (19%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI------ 196
+E++ C+P E T+++L C +GL++ A V +M KYG P AV+YN+ I
Sbjct: 338 VEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQ 397
Query: 197 --------------------------DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
GL + A E+ +M R+ C T+ ++
Sbjct: 398 GRVDDALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNIL 457
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ + + A+++F +M + C P+I TY++L+N + +GL E A E+F+ +
Sbjct: 458 IDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---C 514
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+PD++ YNA++ +A LIS M C P+ ++NI++++ + GL
Sbjct: 515 KPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGL 568
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE E++ + C P E T+A ++A+C +GLL++A + M +YG P V+Y++
Sbjct: 229 EDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTL 288
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G + G A+E+ M C+P+T Y + A + +L EM C
Sbjct: 289 VNGFSEQGRVDDAIELLNGM---LCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDC 345
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---- 311
PN T++ L + + GL + A E+ EQ+ G PD YN L+ ++ R+
Sbjct: 346 LPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALK 405
Query: 312 ----MGCEPDRASYNIMVDAYGRA 331
M C PD S+N + RA
Sbjct: 406 LLNSMPCSPDVISFNAALKGLCRA 429
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 21/237 (8%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WDD + VQ+ ++ P++ M+ +LI++ Q A + ++ C P
Sbjct: 432 WDDAEELIVQML--REDCPLIEMT--FNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIV 487
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ GL+E A +F+ M P YN+ + GL + + A E+ M
Sbjct: 488 TYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNM 544
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R C P+ T+ ++IN + A+++F +M + P+I TY AL+N F+ +G
Sbjct: 545 ARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRL 604
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
++A + + +PD +YN+ + EA +++ M M C P+ ++
Sbjct: 605 DDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ YC SG L A A+ M + P YN+ + GL + A + M
Sbjct: 182 TYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R+ C P+ T+ I + + A++L + M + C P++ Y+ LVN F+ +G
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
++A E+ L G +P+ YNA ++ + R + C P+ A+++++
Sbjct: 299 DDAIEL---LNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355
Query: 325 VDAYGRAGLHEGKCSYSLVE 344
+ GL + C+ ++E
Sbjct: 356 TSCLCQNGLVD--CAMEVLE 373
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E T+ +L+ + C GL+++A VF +M KYG P YN+ I+G + G A
Sbjct: 549 CPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDAR 608
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M C+P +Y + +A + A ++ EM KC PN T+ F
Sbjct: 609 RLLSTMS---CKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLF 665
Query: 270 AREGL 274
G+
Sbjct: 666 VPNGV 670
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A Q S A + E++ S C P TY ++ + G ++AE +F+E+ + G
Sbjct: 139 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 198
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + K G+ ++ + + + + + TY MI++YGK + +AL
Sbjct: 199 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 258
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++EMR+ C P+ TYT LV++ + EA ++ E++ AG++P + ++AL+ AY
Sbjct: 259 GLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAY 318
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
R RM G +PDR +Y +M+D + R+
Sbjct: 319 AKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS 356
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGLLKGGN 204
D P ++ L+ A SG L A+ E+R+ GL P A+ YN+ I +G N
Sbjct: 89 DQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSN 148
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
AV +F+ M C+P TY M++++G+ K+ A +F E+ +P+ TY +
Sbjct: 149 LDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNS 208
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------G 313
L+ AFA+EG E E + E+L AG D YN ++ Y + R+ + G
Sbjct: 209 LLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIG 268
Query: 314 CEPDRASYNIMVDAYGR 330
C PD +Y ++VD+ G+
Sbjct: 269 CTPDAVTYTVLVDSLGK 285
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
++SC + +IEAYG+ L ++AE +++ L + L+ AY SGL E A A+
Sbjct: 587 ILSC-RVAMIEAYGKLKLWQQAE-NFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAI 644
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F M K G P+ N + L+ G + + Q ++ + S T LM+ + K
Sbjct: 645 FDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAK 704
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A F +K++N M++ PN+ Y +++ + E + +++GAG +PD+
Sbjct: 705 AGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVV 764
Query: 297 YNALMEAY-------RLISRMH----MGCEPDRASYNIMVDAYGR 330
N L+ Y R I H G EPD +YN ++ Y R
Sbjct: 765 LNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSR 809
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ A Y E+ C P TY +L+ + + +A V EM G
Sbjct: 244 MIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V +++ I K G A F RM +P Y +M++++ ++ ++ +
Sbjct: 304 LKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLM 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR-------EGLCEEAEEIFEQLQGAGIEPDVYAY 297
L+ M KP+ Y L+ A A+ EG+ ++ E +FE + I +
Sbjct: 364 VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFE-MNPLVISSILIKA 422
Query: 298 NALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ + L+ R + G EPD S ++DAY + G HE SL+E +H P
Sbjct: 423 ECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEK--GLSLLEWIRQHVP 475
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L++EA+ + + Y + + +P Y +++ C + E + EM
Sbjct: 696 LLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEG 755
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P VV N+ + GN + +E++ + +P +TY +I +Y + +
Sbjct: 756 AGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEE 815
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L EM P + +Y L+ A + L E+A+ +FE+++ G + Y+ +M+
Sbjct: 816 GFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMK 875
Query: 303 AYR----------LISRMHM-GCEPDRASYNIMVDAYGRAG 332
YR L+S M G EP A+ +I++ +YG +G
Sbjct: 876 IYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSG 916
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+ ++ LL+ G + + E Y +L++ P EDTY L+ Y + E+ +
Sbjct: 762 LVVLNTLLLMYTGTGNFDRTIE-VYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLL 820
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM K GL P Y + K ++A +F+ M+ + + Y +M+ +Y A
Sbjct: 821 YEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNA 880
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A L + M+ +P I T L+ ++ G +EAE++ L+ + +E Y
Sbjct: 881 RNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPY 940
Query: 298 NALMEAY-----------RLISRMHMGCEPDRASYNIMVDA 327
+ +++AY +L+ G EPD + + A
Sbjct: 941 STVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRA 981
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 48/194 (24%)
Query: 187 PSAVVYNSYIDGLLKGGNPQK-------------------------------------AV 209
P+ V+N+ + + G A+
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ +++ +P TY +I+ + S A+ +F EM + +C+P++ TY A+V+
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHMGCEP--------DR 318
R G +EAE +F++L G +PD YN+L+ A+ + R+ CE D
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238
Query: 319 ASYNIMVDAYGRAG 332
+YN M+ YG+ G
Sbjct: 239 ITYNTMIHMYGKMG 252
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 23/219 (10%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I+ Y +K + K+ F C D Y L+ + L +A VF +M+ G+
Sbjct: 499 IQEYSRKQMLKRGSFG------QDC----DLYEYLITYLEEAELFPEACQVFCDMQFLGI 548
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMAL 244
PS +Y S I + G P+ A ++ R D MI YGK K +
Sbjct: 549 VPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKL-KLWQQA 607
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F + + + + AL++A+A GL E A IF+ + G P V + N +M A
Sbjct: 608 ENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRAL 667
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ R+ + + +++ +M++A+ +AG
Sbjct: 668 IVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAG 706
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A G+ L ++A+ + E+ Y +++K Y + KAE + M++
Sbjct: 837 ILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED 896
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ + + G+P +A ++ +K + ST Y+ +++ Y + +
Sbjct: 897 GIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLG 956
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE---IFEQLQGAGIE 291
+ EM+ +P+ +T+ + A + LCE+ ++ + + LQ G +
Sbjct: 957 ITKLLEMKRDGVEPDHQVWTSFIRAAS---LCEQTDDAILLLKSLQDCGFD 1004
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A Q S A + E++ S C P TY ++ + G ++AE +F+E+ + G
Sbjct: 299 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 358
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + K G+ ++ + + + + + TY MI++YGK + +AL
Sbjct: 359 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 418
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++EMR+ C P+ TYT LV++ + EA ++ E++ AG++P + ++AL+ AY
Sbjct: 419 GLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAY 478
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
R RM G +PDR +Y +M+D + R+
Sbjct: 479 AKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS 516
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGLLKGGN 204
D P ++ L+ A SG L A+ E+R+ GL P A+ YN+ I +G N
Sbjct: 249 DQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSN 308
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
AV +F+ M C+P TY M++++G+ K+ A +F E+ +P+ TY +
Sbjct: 309 LDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNS 368
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------G 313
L+ AFA+EG E E + E+L AG D YN ++ Y + R+ + G
Sbjct: 369 LLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIG 428
Query: 314 CEPDRASYNIMVDAYGR 330
C PD +Y ++VD+ G+
Sbjct: 429 CTPDAVTYTVLVDSLGK 445
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
++SC + +IEAYG+ L ++AE +++ L + L+ AY SGL E A A+
Sbjct: 747 ILSC-RVAMIEAYGKLKLWQQAE-NFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAI 804
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F M K G P+ N + L+ G + + Q ++ + S T LM+ + K
Sbjct: 805 FDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAK 864
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A F +K++N M++ PN+ Y +++ + E + +++GAG +PD+
Sbjct: 865 AGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVV 924
Query: 297 YNALMEAY-------RLISRMH----MGCEPDRASYNIMVDAYGR 330
N L+ Y R I H G EPD +YN ++ Y R
Sbjct: 925 LNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSR 969
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ A Y E+ C P TY +L+ + + +A V EM G
Sbjct: 404 MIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V +++ I K G A F RM +P Y +M++++ ++ ++ +
Sbjct: 464 LKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLM 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR-------EGLCEEAEEIFEQLQGAGIEPDVYAY 297
L+ M KP+ Y L+ A A+ EG+ ++ E +FE + I +
Sbjct: 524 VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFE-MNPLVISSILIKA 582
Query: 298 NALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ + L+ R + G EPD S ++DAY + G HE SL+E +H P
Sbjct: 583 ECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEK--GLSLLEWIRQHVP 635
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L++EA+ + + Y + + +P Y +++ C + E + EM
Sbjct: 856 LLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEG 915
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P VV N+ + GN + +E++ + +P +TY +I +Y + +
Sbjct: 916 AGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEE 975
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L EM P + +Y L+ A + L E+A+ +FE+++ G + Y+ +M+
Sbjct: 976 GFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMK 1035
Query: 303 AYR----------LISRMHM-GCEPDRASYNIMVDAYGRAG 332
YR L+S M G EP A+ +I++ +YG +G
Sbjct: 1036 IYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSG 1076
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+ ++ LL+ G + + E Y +L++ P EDTY L+ Y + E+ +
Sbjct: 922 LVVLNTLLLMYTGTGNFDRTIE-VYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLL 980
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM K GL P Y + K ++A +F+ M+ + + Y +M+ +Y A
Sbjct: 981 YEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNA 1040
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A L + M+ +P I T L+ ++ G +EAE++ L+ + +E Y
Sbjct: 1041 RNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPY 1100
Query: 298 NALMEAY-----------RLISRMHMGCEPDRASYNIMVDA 327
+ +++AY +L+ G EPD + + A
Sbjct: 1101 STVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRA 1141
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I+ Y +K + K+ F C D Y L+ + L +A VF +M+ G+
Sbjct: 659 IQEYSRKQMLKRGSFG------QDC----DLYEYLITYLEEAELFPEACQVFCDMQFLGI 708
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMAL 244
PS V+ S+I + G P+ A ++ R D MI YGK K +
Sbjct: 709 VPSQKVFPSFIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKL-KLWQQA 767
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F + + + + AL++A+A GL E A IF+ + G P V + N +M A
Sbjct: 768 ENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRAL 827
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ R+ + + +++ +M++A+ +AG
Sbjct: 828 IVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAG 866
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A G+ L ++A+ + E+ Y +++K Y + KAE + M++
Sbjct: 997 ILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED 1056
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ + + G+P +A ++ +K + ST Y+ +++ Y + +
Sbjct: 1057 GIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLG 1116
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE---IFEQLQGAGIE 291
+ EM+ +P+ +T+ + A + LCE+ ++ + + LQ G +
Sbjct: 1117 ITKLLEMKRDGVEPDHQVWTSFIRAAS---LCEQTDDAILLLKSLQDCGFD 1164
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------- 302
+R + + + A++ +AR G ++A ++ + ++ IEPD+ ++N L+
Sbjct: 212 LRFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGC 271
Query: 303 -----AYRLISRM-HMGCEPDRASYNIMVDA 327
A L+ + G PD +YN ++ A
Sbjct: 272 LAAGVALELLHEVRQAGLRPDAITYNTLISA 302
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 155 DTYALLLKAYCMSGL--LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
D Y L + C S L ++ A +VF +M K GL P AV +N+ I+GL K G +AVE F
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFF 188
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ CQP+ TYT +IN K ++ A LF +M C+PN+ TY L+++ ++
Sbjct: 189 DDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKD 248
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
L EA +IF ++ I PD++ YN+L+ EA L++ M + P+ ++
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308
Query: 322 NIMVDAYGRAG 332
N++VDA + G
Sbjct: 309 NVLVDAICKEG 319
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 99/228 (43%), Gaps = 50/228 (21%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C G +A F + G P+ Y + I+GL K G A +
Sbjct: 163 PDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGL 222
Query: 212 FQRMKRDCCQPSTETYTLMIN------LYGKASKSFMALK-------------------- 245
F++M+ CQP+ TY ++I+ L +A F +K
Sbjct: 223 FKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCN 282
Query: 246 ---------LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
L NEM S PNI T+ LV+A +EG EA+ +F+ + G+EPDV
Sbjct: 283 FRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVT 342
Query: 297 YNALMEAYRLISRMHM-------------GCEPDRASYNIMVDAYGRA 331
Y++LM Y L RM + GC+PD SYNI++ Y +A
Sbjct: 343 YSSLMYGYSL--RMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C P +Y +L+K YC + +++A+ +F EM GL P V YN+ I GL + G
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGR 425
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A ++F+ M + P TY+++++ + K A +LF M+S KP+I Y
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-G 313
L++A + G ++A ++F +L G+ P+V Y ++ EA M G
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545
Query: 314 CEPDRASYNIMVDAY 328
C PD SYN+++ +
Sbjct: 546 CPPDEFSYNVIIRGF 560
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A E+ +P T+ +L+ A C G + +A+ VF+ M + G+ P V Y+S
Sbjct: 287 KEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL 346
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ G +A ++F M C+P +Y ++I Y KA + A +LFNEM
Sbjct: 347 MYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGL 406
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
P+ Y L++ + G EA+++F+ + G PD++ Y+ L++ A+R
Sbjct: 407 TPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFR 466
Query: 306 LISRMHMG-CEPDRASYNIMVDAYGRAG 332
L M +PD A YNI++DA + G
Sbjct: 467 LFRVMQSTYLKPDIAMYNILIDAMCKFG 494
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + +A+ + E++ P Y L+ C G L +A+ +F+ M
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ +DG K G KA +F+ M+ +P Y ++I+ K A
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF+E+ PN+ YT ++N +EGL +EA E F ++G G PD ++YN ++
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559
Query: 304 Y 304
+
Sbjct: 560 F 560
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 46/231 (19%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S C PT TY ++ C G A +F++M + G P+ V YN ID L K +
Sbjct: 194 SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNE 253
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A++IF MK P TY +I + A L NEM S PNI T+ LV+
Sbjct: 254 ALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVD 313
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPD---------------------------------- 293
A +EG EA+ +F+ + G+EPD
Sbjct: 314 AICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKP 373
Query: 294 -VYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++YN L++ Y +L + M H G PD +YN ++ + G
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ + L +A + + R P TY L++ C ++A A+ EM
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ +N +D + K G +A +F+ M +P TY+ ++ Y + A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
KLF+ M + CKP+ +Y L+ + + +EA+++F ++ G+ PD YN L+
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA L MH G PD +Y++++D + + G
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEG 459
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q ++A+ + + + +P TY++LL +C G L KA +FR M+
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P +YN ID + K GN + A ++F + P+ + YT +IN K AL
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEAL 535
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR 271
+ F M C P+ +Y ++ F +
Sbjct: 536 EAFRNMEGDGCPPDEFSYNVIIRGFLQ 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 9/172 (5%)
Query: 89 LPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSIL--------LIEAYGQKSLHKKAE 139
L P + ++ LI+ QL RL + D M L L++ + ++ KA
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ + + P Y +L+ A C G L+ A +F E+ GL P+ +Y + I+ L
Sbjct: 466 RLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNL 525
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
K G +A+E F+ M+ D C P +Y ++I + + A +L EMR
Sbjct: 526 CKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 19/267 (7%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
N + +AF + W + N+ P V+ + LI+A + +KA
Sbjct: 128 NVLMNAFKKAKRVDSVWKLFEEMQ-----NQNCSPNVITYSI---LIDAVCKCGGVEKAL 179
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+L++ C P TY ++ SG ++KA +F EM GL + VVYNS I GL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ G A ++F+ M QP T+T ++ G A ++ A ++F E R C ++
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-------- 311
Y L++ + +EA EIF +L+ G+ PDVY +NALM+ R+H
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359
Query: 312 ---MGCEPDRASYNIMVDAYGRAGLHE 335
GC PD YN ++D ++G E
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVE 386
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
SR I + L + Y +GLLEK+ + M + +A YNS ID +K G QK
Sbjct: 48 SRYILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQK 107
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ +++ M + +P T T+ +++N + KA + KLF EM++ C PN+ TY+ L++
Sbjct: 108 ALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILID 167
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEP 316
A + G E+A ++F ++ G P+++ Y ++++ A+ L M G
Sbjct: 168 AVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVA 227
Query: 317 DRASYNIMVDAYGRAG 332
R YN ++ GR+G
Sbjct: 228 TRVVYNSLIHGLGRSG 243
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 116 VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
+L + I L Y L +K+ + RC T Y L+ A+ +G +KA A
Sbjct: 51 ILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALA 110
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
V+R M + GL P +N ++ K ++F+ M+ C P+ TY+++I+
Sbjct: 111 VYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K ALK+F +M+S C+PNI TYT++++ + G ++A +FE++ G+
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 296 AYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
YN+L+ A +L M G +PD ++ +V G AG
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAG 278
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ G+ KA F + E+ + T Y L+ SG + A +FREM G
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V + S + GL G +A IFQ + C Y ++I+ K+ + A
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F E+ P++ T+ AL++ + G +A + ++ AG PDV YN L++
Sbjct: 320 EIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
R L+ +G EPD +YN ++D + G E
Sbjct: 380 RKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIE 421
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G +A + E D C + Y +L+ C S L++A +F E+ + G
Sbjct: 270 LVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG 329
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P +N+ +DGL K G A + MKR C P Y +I+ K+ + A
Sbjct: 330 LVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAG 389
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L EM+S +P++ TY L++ + G E+A +FE++ G V YN ++
Sbjct: 390 QLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTV-TYNTILNGL 448
Query: 302 -------EAYRLISRMHMGC-----EPDRASYNIMVDAYGRAGLHE 335
EAY+L + M +PD +Y +++ +AGL E
Sbjct: 449 CMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSE 494
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ SG +E+A + EM+ G P V YN+ ID KGG + A+
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDAL 424
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK----PNICTYTAL 265
+F+ + +T TY ++N A + A KLFN M+ P+ TYT L
Sbjct: 425 RLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTL 483
Query: 266 VNAFAREGLCEEAEEI 281
+N + GL E A +
Sbjct: 484 LNGARQAGLSELANSL 499
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A Q S A + E++ S C P TY ++ + G ++AE +F+E+ + G
Sbjct: 72 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 131
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + K G+ ++ + + + + + TY MI++YGK + +AL
Sbjct: 132 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 191
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++EMR+ C P+ TYT LV++ + EA ++ E++ AG++P + ++AL+ AY
Sbjct: 192 GLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAY 251
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
R RM G +PDR +Y +M+D + R+
Sbjct: 252 AKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS 289
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGLLKGGN 204
D P ++ L+ A SG L A+ E+R+ GL P A+ YN+ I +G N
Sbjct: 22 DQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSN 81
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
AV +F+ M C+P TY M++++G+ K+ A +F E+ +P+ TY +
Sbjct: 82 LDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNS 141
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------G 313
L+ AFA+EG E E + E+L AG D YN ++ Y + R+ + G
Sbjct: 142 LLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIG 201
Query: 314 CEPDRASYNIMVDAYGR 330
C PD +Y ++VD+ G+
Sbjct: 202 CTPDAVTYTVLVDSLGK 218
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ Y G L+ A ++ EMR G P AV Y +D L K +A ++ + M
Sbjct: 173 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 232
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P+ T++ +I Y K+ + A + F+ M KP+ Y +++ FAR
Sbjct: 233 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDET 292
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ ++ + G +PD Y L+ A
Sbjct: 293 RKLMVLYRAMIKDGYKPDDGLYQVLLAA 320
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ A Y E+ C P TY +L+ + + +A V EM G
Sbjct: 177 MIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG 236
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V +++ I K G A F RM +P Y +M++++ ++ ++ +
Sbjct: 237 LKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLM 296
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR-------EGLCEEAEEIFE 283
L+ M KP+ Y L+ A A+ EG+ ++ E +FE
Sbjct: 297 VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFE 342
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY++L+ +C + +EKA + EM + G PP Y S ID L K A E+
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 463
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ +K +C S Y +MI GKA + A+ +F+EM C P++ Y AL++ AR
Sbjct: 464 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRAS 320
G+ +EA ++Q G PD+ +YN ++ A ++S M PD S
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 583
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ A AG+ E
Sbjct: 584 YNTVLGALSHAGMFE 598
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + A E+ ++ PT Y +L+ + + A ++F EMR
Sbjct: 236 LISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQY 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y I GL K G +A F M+R+ C+P T MIN GKA + A+
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAM 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF EM + +C P++ TY ++ A F + E FE+++ +GI P + Y+ L++
Sbjct: 356 KLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDG 415
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
+ +RM G P A+Y ++DA G+A ++ C
Sbjct: 416 FCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 447 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + GL + G +A+ +RM+ C P +Y +++N K A+
Sbjct: 507 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ + M+ +P++ +Y ++ A + G+ EEA ++ E++ G E D+ Y++++EA
Sbjct: 567 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEA 625
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 36/290 (12%)
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL------RLNKKWDPIVL 117
P A++ L + VD + + + D +NV +Q R N + D
Sbjct: 75 PDAEKALEVLMLRVDHWLVREVMKT--------DIGVNVKMQFFRWAAKRRNYEHDTSTY 126
Query: 118 MSCVSIL-LIEAYGQ--KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
M+ + L ++E YG+ K + + + C+ T + +++ + ++ KA
Sbjct: 127 MALIRCLEVVEQYGEMWKMIQEMVR-------NPICVVTPTELSEVVRMLGNAKMVSKAI 179
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINL 233
A+F +++ P+A YNS I L+ G K E++ M + C P T TY+ +I+
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISA 239
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ K + A +L NEM+ + +P YT L+ F + A +FE+++ PD
Sbjct: 240 FCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPD 299
Query: 294 VYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
V+ Y L+ EAY M GC PD N M++ G+AG
Sbjct: 300 VFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAG 349
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY++L+ +C + +EKA + EM + G PP Y S ID L K A E+
Sbjct: 371 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 430
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ +K +C S Y +MI GKA + A+ +F+EM C P++ Y AL++ AR
Sbjct: 431 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 490
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRAS 320
G+ +EA ++Q G PD+ +YN ++ A ++S M PD S
Sbjct: 491 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 550
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ A AG+ E
Sbjct: 551 YNTVLGALSHAGMFE 565
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 18/265 (6%)
Query: 100 INVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYA 158
I + Q++ +K PI I+++ GQ ++K Y E+ + C P TY+
Sbjct: 146 ITIFYQIK-TRKCQPIAQAYNSMIIMLMHEGQ---YEKVHQLYNEMSTEGHCFPDTVTYS 201
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
L+ A+C G + A + EM++ G+ P+ +Y I K + A+ +F+ M+
Sbjct: 202 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 261
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
C+P TYT +I GKA + A F EM+ C+P+ ++N + G ++A
Sbjct: 262 YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 321
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRM-HMGCEPDRASYNIMVD 326
++F++++ P V YN +++A RM G P +Y+I++D
Sbjct: 322 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 381
Query: 327 AYGRAGLHEGKCSYSLVELSVKHYP 351
+ + E K L E+ K +P
Sbjct: 382 GFCKTNRME-KAMMLLEEMDEKGFP 405
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y +L+ + A ++F EMR P Y I GL K G +A
Sbjct: 230 PTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHF 289
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA-FA 270
F M+R+ C+P T MIN GKA + A+KLF EM + +C P++ TY ++ A F
Sbjct: 290 FCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFE 349
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
+ E FE+++ +GI P + Y+ L++ + +RM G P A
Sbjct: 350 SKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPA 409
Query: 320 SYNIMVDAYGRAGLHEGKC 338
+Y ++DA G+A ++ C
Sbjct: 410 AYCSLIDALGKAKRYDLAC 428
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 414 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 473
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + GL + G +A+ +RM+ C P +Y +++N K A+
Sbjct: 474 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 533
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ + M+ +P++ +Y ++ A + G+ EEA ++ +++ G E D+ Y++++EA
Sbjct: 534 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA 592
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 23/244 (9%)
Query: 111 KWDPI------VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY 164
KW P VLM V L+ + + + + R DT + +
Sbjct: 39 KWGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIH 98
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG-GNPQ---KAVEIFQRMKRDCC 220
C+ ++E+ +++ +++ P VV + + +++ GN + +A+ IF ++K C
Sbjct: 99 CLE-VVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKC 157
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAE 279
QP + Y MI + + +L+NEM + C P+ TY+AL++AF + G + A
Sbjct: 158 QPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAI 217
Query: 280 EIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAY 328
++ +++ G++P Y L+ A L M H C PD +Y ++
Sbjct: 218 QLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGL 277
Query: 329 GRAG 332
G+AG
Sbjct: 278 GKAG 281
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ Q M R+ C + + ++ + G A A+ +F ++++ KC+P Y +++
Sbjct: 111 KMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIM 170
Query: 269 FAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAY----------RLISRM-HMGCEP 316
EG E+ +++ ++ G PD Y+AL+ A+ +L++ M +G +P
Sbjct: 171 LMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQP 230
Query: 317 DRASYNIMV-------DAYGRAGLHE 335
Y +++ DA+G L E
Sbjct: 231 TTKIYTMLIALFFKFNDAHGALSLFE 256
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 51/117 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + +A T + + CIP ++Y ++L +G +A + M++
Sbjct: 484 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 543
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ P V YN+ + L G ++A ++ + M + TY+ ++ GK +
Sbjct: 544 VRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHEY 600
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ YG+ ++A L+++ + P TY L+ A M +A AV++ +
Sbjct: 220 LVDVYGKLGQWERA-IHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD 278
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P++ YN+ I K KA+E++Q M R S TY+ +I+ KA + A
Sbjct: 279 GFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETA 338
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++FNEM+ KC PN TY +LV A A+ G E+A E+FEQ+ G PDV Y AL+ A
Sbjct: 339 LRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISA 398
Query: 304 Y-------RLISRMH----MGCEPDRASYNIMVDAYGRAGL 333
Y + + H GC+PD YN ++D G+
Sbjct: 399 YERGGQWQKALQAFHKMCVQGCKPDAIVYNAIIDTLWETGI 439
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 77 VDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
V NT+ D + L W+ I+V + + ++ +P++ I+ Q +
Sbjct: 215 VTYNTLVDVYGKL----GQWERAIHV-LDVMKHEGVEPVLRTYNTLIIACNMCNQP---R 266
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A Y LL P TY L+ AY + L KA V++EM + + S + Y+S I
Sbjct: 267 EALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLI 326
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K G + A+ IF M++D C P+T TY ++ + + A ++F +M +H C
Sbjct: 327 SACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCT 386
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
P++ TYTAL++A+ R G ++A + F ++ G +PD YNA+++
Sbjct: 387 PDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNAIID 432
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y + I + G + +A+E+ Q M+ + + TYT ++N+ K K +AL ++N MR
Sbjct: 147 YTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSMR 206
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
+ C PN+ TY LV+ + + G E A + + ++ G+EP + YN L+
Sbjct: 207 AVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPR 266
Query: 302 EAYRLISR-MHMGCEPDRASYNIMVDAYGR 330
EA + R + G P+ +YN ++ AYG+
Sbjct: 267 EALAVYQRLLSDGFTPNSTTYNALISAYGK 296
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 165 CMSGL-LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
C+ G +++A + +EMR + + Y + ++ +K G A++I+ M+ C P+
Sbjct: 154 CIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPN 213
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
TY ++++YGK + A+ + + M+ +P + TY L+ A EA +++
Sbjct: 214 VVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQ 273
Query: 284 QLQGAGIEPDVYAYNALMEAY 304
+L G P+ YNAL+ AY
Sbjct: 274 RLLSDGFTPNSTTYNALISAY 294
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK--------RDCCQPSTETYTLMINLYGKA 237
P V++ + L + G ++A+E+F ++ R C + T T+ + ++G+
Sbjct: 100 PLPEVIFRALHHDLSRLGKDRRAMELFDWLRSANERSPLRALCDVYSYTATISLCIHGQD 159
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
AL+L EMRS + N+ TYTAL+N + G A +I+ ++ P+V Y
Sbjct: 160 VDR--ALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTY 217
Query: 298 NALMEAY-------RLISRM----HMGCEPDRASYNIMVDA 327
N L++ Y R I + H G EP +YN ++ A
Sbjct: 218 NTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIA 258
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+AY + +A F L+ + S+ + P +Y +++ C G +++A + EM
Sbjct: 255 LIDAYCKMGRIDEA-FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK 313
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ ++G K GN +A+ I M R+ PS TYT +IN KA A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ F++MR +PN TYT L++ F+R+GL EA I ++ +G P V YNA +
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ ++ RM G PD SY+ ++ + R G
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C+P TY L+ AYC G +++A + + M G+ P+ + YN I+GL + G
Sbjct: 239 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG 298
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ ++A EI + M P TY ++N Y K AL + EM + P++ TYT
Sbjct: 299 SMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYT 358
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
AL+N+ + A E F+Q++ G+ P+ Y L+ EAYR+++ M
Sbjct: 359 ALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 418
Query: 313 GCEPDRASYNIMVDAY 328
G P +YN + +
Sbjct: 419 GFSPSVVTYNAFIHGH 434
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 12/253 (4%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
+H D ++ L + + P VL S S+L + S+ AE Y E++ SR
Sbjct: 153 SHLNMIDQAVNTINLAKSSGFMPGVL-SYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVS 211
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L++ +C G L+K F EM + G P+ V YN+ ID K G +A +
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M QP+ +Y ++IN + A ++ EM P+ TY L+N + +
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
EG +A I ++ G+ P V Y AL+ A +M + G P+ +
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391
Query: 321 YNIMVDAYGRAGL 333
Y ++D + R GL
Sbjct: 392 YTTLIDGFSRQGL 404
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 13/190 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL--KGGNPQKAVEIFQ 213
+ L++K+Y ++++A + G P + YNS +D ++ +G A E+++
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M R P+ TY ++I + + L F EM + C PN+ TY L++A+ + G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
+EA + + + G++P++ +YN ++ EA+ ++ M + G PD +YN
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323
Query: 323 IMVDAYGRAG 332
+++ Y + G
Sbjct: 324 TLLNGYCKEG 333
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y ++ +A + E++ + P+ TY L+ + C + L +A F +MR G
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ Y + IDG + G +A I M PS TY I+ + + AL
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM P++ +Y+ +++ F R+G + A ++ +++ G+ PD Y++L++
Sbjct: 445 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 504
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ R + MG PD +Y +++AY G
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 20/260 (7%)
Query: 87 DSLPPTHATWDDLINVSVQLR-LNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKK 137
+ + P+ T+ LIN + R LN+ + M + LI+ + ++ L +
Sbjct: 348 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 407
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A E+ +S P+ TY + +C+ +E+A V +EM + GL P V Y++ I
Sbjct: 408 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 467
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + G +A ++ Q M P TY+ +I + + A L EM P
Sbjct: 468 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 527
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TYT L+NA+ EG +A + +++ G PD Y+ L+ EA RL+
Sbjct: 528 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 587
Query: 308 SRM-HMGCEPDRASYNIMVD 326
++ + P +Y+ +++
Sbjct: 588 FKLIYEESVPSDVTYDTLIE 607
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+LD P E TY L+ AYC+ G L KA + EM G P AV Y+ I+GL K
Sbjct: 519 EMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 578
Query: 204 NPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A + ++ + PS TY TL+ N KS +AL
Sbjct: 579 RTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL------------------ 620
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
+ F +GL EA+ +FE + +P YN ++ +A+ L M H
Sbjct: 621 ---IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 677
Query: 312 MGCEPDRASYNIMVDAYGRAGLHE 335
G P + ++ A + G++E
Sbjct: 678 SGFVPHTVTVITLIKALFKEGMNE 701
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 28/231 (12%)
Query: 89 LPPTHATWDDLINV-SVQLRLNKKW---DPIV----LMSCVSI-LLIEAYGQKSLHKKAE 139
LPP T+ LIN V+ LNK D ++ L V+ +LI +++ ++A+
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584
Query: 140 FTYLELLDSRCIPTEDTY---------------ALLLKAYCMSGLLEKAEAVFREMRKYG 184
+L+ +P++ TY L+K +CM GL+ +A+ VF M +
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFMA 243
P VYN I G +GGN KA +++ M P T T TL+ L+ + M+
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 704
Query: 244 LKLFNEMRSHKCKPNICTYT-ALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ + +RS C+ N LV +EG E + + G+ P+
Sbjct: 705 EVIGDTLRS--CRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P+ TY +++ C G LE + +F +MR+ GL P V YNS IDG K G
Sbjct: 220 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 279
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ ++ +F MK C P TY +IN Y K K A + F+EM+++ KPN+ TY+
Sbjct: 280 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 339
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L++AF +EG+ + A ++ ++ G+ P+ + Y +L+ EA++L++ M
Sbjct: 340 TLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA 399
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G + + +Y ++D +AG
Sbjct: 400 GVKLNIVTYTALLDGLCKAG 419
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ ++ + E+ D C+P TY L+ YC + +A F EM+ G
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ ID K G Q A+++ M+R P+ TYT +I+ KA A
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL N+M K NI TYTAL++ + G EAEE+F + GI P+ Y AL+ Y
Sbjct: 391 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 450
Query: 305 RLISRMH--MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
RM M NI D + G CS +E
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLE 492
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+ + +L + GLLE+A F MR + P A N + L K GN Q
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ F M PS TY +MI+ K + +LF +MR P++ TY +L++ +
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
+ G EE +F +++ G PD+ YN L+ Y +M + G +P+
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335
Query: 319 ASYNIMVDAYGRAGLHEG 336
+Y+ ++DA+ + G+ +G
Sbjct: 336 VTYSTLIDAFCKEGMMQG 353
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L + + L ++A + + + R +P + LL SG + F +M
Sbjct: 165 VLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA 224
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS YN ID L K G+ + + +F +M+ P TY +I+ YGK
Sbjct: 225 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 284
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LFNEM+ C P+I TY L+N + + A E F +++ G++P+V Y+ L++A
Sbjct: 285 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 344
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ +L+ M G P+ +Y ++DA +AG
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAG 384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 11/238 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ + + A ++ + +P E TY L+ A C +G L +A + +M + G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + +DGL K G +A E+F+ M +D P+ + YT +++ Y KA + A+
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ +M KP++ Y +++ + EE + I E+++ GI + +++AY
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 520
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
M +G E +Y +++D AG+ E Y LS+ P
Sbjct: 521 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQP 578
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ +C LE+ + + EM+ G+ + V+ + ID K G A+
Sbjct: 473 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 532
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ M+ + + TY ++I+ +A +A+ F M S +PN+ YT+L++
Sbjct: 533 FQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCX 592
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
E A+++F+++Q G+ PD+ A+ AL+ EA LISRM + E D
Sbjct: 593 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 652
Query: 321 YNIMVDAYGRAG-LHEGK 337
Y +V + + G LH+ +
Sbjct: 653 YTSLVSGFSQCGELHQAR 670
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 109/274 (39%), Gaps = 70/274 (25%)
Query: 139 EFTYLELLDSRCIP---TED-----------------TYALLLKAYCMSGLLEKAEAVFR 178
EFTY L+D+ C TE TY LL C +G + +AE VFR
Sbjct: 370 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 429
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------- 227
M K G+ P+ VY + + G +K + A++I ++M +P Y
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 489
Query: 228 ------------------------TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
T +I+ Y KA KS AL F EM+ + I TY
Sbjct: 490 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 549
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
L++ G+ E A + F ++ G++P+V Y +L++ A +L M
Sbjct: 550 VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELS 346
G PD ++ ++D L G +LV +S
Sbjct: 610 GMTPDITAFTALID----GNLKHGNLQEALVLIS 639
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 7/236 (2%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+S +I+AY + A + E+ D T TY +L+ C +G++E A F M
Sbjct: 512 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRM 571
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
GL P+ VY S IDGL + A ++F M+ P +T +I+ K
Sbjct: 572 LSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 631
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL L + M + ++ YT+LV+ F++ G +A + F ++ GI P+ L
Sbjct: 632 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICL 691
Query: 301 MEAY----RLISRMHMGCEPDRASYNIMVD---AYGRAGLHEGKCSYSLVELSVKH 349
+ Y +L + + E +R +Y+ D AY G++ +Y ++ ++H
Sbjct: 692 LREYYKRGQLDEAIELKNEMERMAYSFEFDAQLAYNEQGVNLTLHAYLYLKFDIQH 747
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C + + ++ +++ + A + F+ MR+ + P + L++ ++ G +
Sbjct: 153 RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQ 212
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMV 325
+ F + GAGI P V+ YN +++ + RL +M MG PD +YN ++
Sbjct: 213 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 272
Query: 326 DAYGRAG 332
D YG+ G
Sbjct: 273 DGYGKVG 279
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 46/226 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C G +++A +F EM K G P+ + Y + I+GL K GN AV++
Sbjct: 161 PDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDV 220
Query: 212 FQRMKRDCCQPSTETYTLMIN----------------------------LYGKASKSFM- 242
F++M+++ C+P+ TY+ +I+ Y F
Sbjct: 221 FKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCN 280
Query: 243 ------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A +LF EM PN T+T LV+ +EG+ EA +FE + G+EPD+
Sbjct: 281 LGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIST 340
Query: 297 YNALMEAY---RLISR--------MHMGCEPDRASYNIMVDAYGRA 331
YNALM+ Y RL++ + GC P SYNI+++ Y ++
Sbjct: 341 YNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKS 386
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + L +A+ + ++ C P +Y +L+ YC S +++A+++ EM
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ + GL + G P++A+ +F+ M P+ TY ++++ + K AL
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEAL 463
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
KL M+ K +PNI YT L+ G E A+E+F +L G G PD+ Y ++
Sbjct: 464 KLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAY 328
EAY L +M G P+ SYN+M+ +
Sbjct: 524 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 13/194 (6%)
Query: 153 TEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T + Y+L L+ C ++ + +V +M K G+ P A+ +N+ I+GL G ++AVE
Sbjct: 125 THNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVE 184
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M + +P+ +YT +IN K + MA+ +F +M + CKPN+ TY+ ++++
Sbjct: 185 LFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLC 244
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
++ L +A E ++ GI P+V+ YN+++ EA RL M P+
Sbjct: 245 KDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTV 304
Query: 320 SYNIMVDAYGRAGL 333
++ I+VD + G+
Sbjct: 305 TFTILVDGLCKEGM 318
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ ++ + +A + + + P TY L+ YC+ L+ +A+ VF M +
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P A YN I+G K +A + M P T TY+ ++ + + A
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LF EM S+ PN+ TY L++ F + G +EA ++ + ++ +EP++ Y L+E
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
+ ++ + G PD +Y +M+ + GL +
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSD 530
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 97/181 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + +A+ E+ P TY+ L++ C G ++A +F+EM Y
Sbjct: 378 ILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSY 437
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V Y +DG K G+ +A+++ + MK +P+ YT++I A K +A
Sbjct: 438 GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVA 497
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+++ +P+I TYT ++ +EGL +EA ++F +++ G P+ +YN +++
Sbjct: 498 KELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 557
Query: 304 Y 304
+
Sbjct: 558 F 558
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ ++ + C L+ A EM + G+PP+ YNS + G G +A
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M P+T T+T++++ K A +F M +P+I TY AL++ +
Sbjct: 289 RLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ L EA+++FE + G P ++YN L+ EA L++ M H PD
Sbjct: 349 CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408
Query: 319 ASYNIMVDAYGRAG-------LHEGKCSY 340
+Y+ ++ + G L + CSY
Sbjct: 409 VTYSTLMQGLCQLGRPKEALNLFKEMCSY 437
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY ++ +C G L +A +F+EM + P+ V + +DGL K G
Sbjct: 258 EMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEG 317
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A +F+ M +P TY +++ Y A K+F M C P +Y
Sbjct: 318 MVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYN 377
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+N + + +EA+ + ++ + PD Y+ LM EA L M
Sbjct: 378 ILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSY 437
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G P+ +Y I++D + + G
Sbjct: 438 GPHPNLVTYVILLDGFCKHG 457
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +LL +C G L++A + + M++ L P+ V Y I+G+ G + A E+
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F ++ D +P TYT+MI K S A LF +M PN C+Y ++ F +
Sbjct: 501 FSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 560
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A + +++ G ++ + L++
Sbjct: 561 NQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A A F M + PS V + ++ K V + +M D + + Y+L
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQM--DLFRVTHNVYSL 131
Query: 230 --MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+IN + + ++ + +M P+ T+ AL+N EG +EA E+F ++
Sbjct: 132 NILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK 191
Query: 288 AGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDA 327
G EP+V +Y ++ A + +M GC+P+ +Y+ ++D+
Sbjct: 192 RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDS 242
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
H D+ + + ++ KK +P ++ + LIE + A+ + +L P
Sbjct: 456 HGHLDEALKLLKSMK-EKKLEPNIVHYTI---LIEGMFIAGKLEVAKELFSKLFGDGTRP 511
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
TY +++K GL ++A +FR+M G P++ YN I G L+ + A+ +
Sbjct: 512 DIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 571
Query: 213 QRMKRDCCQPSTETYTLMINL 233
M + T+ ++++L
Sbjct: 572 DEMVGKRFSVNLSTFQMLLDL 592
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + S + A + E++D P E TY L+ YC L+ A ++ M++ G
Sbjct: 671 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 730
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN I GL K N A E+ + M + P+ TYT MI+ K + +AL
Sbjct: 731 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 790
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++FN+M C PN+ TY++L+ A +EG EEAE +F +L+ G+ PD Y ++EAY
Sbjct: 791 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 850
Query: 305 ----------RLISRM-HMGCEPDRASYNIMV 325
+ RM GC+P +Y +++
Sbjct: 851 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P E +Y L+ +C +E A +F EM GL P+ V Y + IDG K
Sbjct: 658 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 717
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A + + MKR C+P+ +TY ++I+ K + A +L M PN+ TYTA++
Sbjct: 718 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 777
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCE 315
+ + G A E+F ++ G P++ Y++L+ EA L + + G
Sbjct: 778 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 837
Query: 316 PDRASYNIMVDAYGRAG 332
PD +Y M++AY +G
Sbjct: 838 PDEITYVKMIEAYIMSG 854
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 37/257 (14%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
D + P T++ LIN+ V+ R K + +++ G+ L FT +
Sbjct: 554 DGVFPNTVTYNALINILVENRRIK----------YAFVVLNLMGRNGL-----FTNIV-- 596
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
TY ++K YC+ G +KA V M + G + V YN+ I G GN
Sbjct: 597 ---------TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTT 647
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ I M+ C+P +YT +I + K SK A LFNEM PN TYTAL+
Sbjct: 648 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 707
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCE 315
+ + ++ + A + E ++ +G P+V YN L+ A L M G
Sbjct: 708 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 767
Query: 316 PDRASYNIMVDAYGRAG 332
P+ +Y M+D + G
Sbjct: 768 PNVVTYTAMIDGLCKNG 784
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A + S C P TY +L+ AE + + M + G
Sbjct: 706 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 765
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y + IDGL K G+ A+E+F +M C P+ TY+ +I G+ K A
Sbjct: 766 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 825
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF E+ H P+ TY ++ A+ G E A ++ AG +P ++ Y L++
Sbjct: 826 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885
Query: 305 R---LISRMHMGCEPD 317
+ L++ + PD
Sbjct: 886 KNEYLLADQRLAALPD 901
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 55/290 (18%)
Query: 91 PTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSILL--------IEAYGQKSLHKKAEFT 141
P T+ LIN + R+N+ +D I M IL I A ++ A
Sbjct: 453 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 512
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL-- 199
++++ + C P TY L+ C+SGLL+ A +F M + G+ P+ V YN+ I+ L
Sbjct: 513 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 572
Query: 200 -----------------------------LKG----GNPQKAVEIFQRMKRDCCQPSTET 226
+KG G+P+KA+ + M + + T
Sbjct: 573 NRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 632
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +I Y + + AL++ + MR CKP+ +YT L+ F + E A +F ++
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692
Query: 287 GAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
G+ P+ Y AL++ Y L+ M GC P+ +YN+++
Sbjct: 693 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 742
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++ +S P TY ++ +C L+ A VF +M K G P+ V Y++ I+
Sbjct: 404 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 463
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL G +A ++ + M P+ T T I A +LF +M++ C+P
Sbjct: 464 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 523
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPD 317
N+ TYTAL++ GL + A +F ++ G+ P+ YNAL +++ E
Sbjct: 524 NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL---------INILVENR 574
Query: 318 RASYNIMV-DAYGRAGLHEGKCSYS 341
R Y +V + GR GL +Y+
Sbjct: 575 RIKYAFVVLNLMGRNGLFTNIVTYN 599
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L P Y ++ A C G + AE + +++ + + P Y S I G +
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A+++F +M ++ C+P+T TY+ +IN + + A L EM H P T
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
T + A G E+A +F ++ G EP+VY Y AL+ A L RM
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
Query: 312 M-GCEPDRASYNIMVD 326
G P+ +YN +++
Sbjct: 553 RDGVFPNTVTYNALIN 568
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ LL G+ + M G+ P+ ++YN+ I+ L K GN A I +++
Sbjct: 353 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 412
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T TYT MI + + AL++FN+M C+PN TY+ L+N G
Sbjct: 413 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 472
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA ++ ++ GI P + + +A+RL M + GCEP+ +Y ++
Sbjct: 473 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 532
Query: 326 DAYGRAGL 333
+GL
Sbjct: 533 SGLCVSGL 540
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ + GL Y++ + L + G ++ + RM + QP+ Y +IN K
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 400
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A + ++ + P+ TYT+++ R+ + A ++F Q+ G EP+ Y+
Sbjct: 401 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 460
Query: 300 LM----------EAYRLISRM 310
L+ EA+ LI M
Sbjct: 461 LINGLCDSGRVNEAFDLIREM 481
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY++L+ +C + EKA + EM + G PP Y S ID L K A E+
Sbjct: 400 PSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANEL 459
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ +K +C S Y +MI GKA + A+ LF+EM C PN+ Y AL++ AR
Sbjct: 460 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLAR 519
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G+ +EA ++Q G PD+ +YN ++ A L + +PD S
Sbjct: 520 AGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVS 579
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ A AG+ E
Sbjct: 580 YNTVLGALSHAGMFE 594
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + A + E+ D+ PT Y +L+ + A +F EMR
Sbjct: 232 LISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQY 291
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y I GL K G +A F M+R+ C+P T MIN GKA + A+
Sbjct: 292 CRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAI 351
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF EM + +C P++ TY ++ A F + E FE+++G+GI P + Y+ L++
Sbjct: 352 KLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDG 411
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
+ L+ M G P A+Y ++DA G+A
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ +C P TY+ L+ A+C G + A + EM+ G+ P+A +Y + L K N
Sbjct: 219 EGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVH 278
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ +F+ M+ C+P TYT +I GKA + A F+EMR C+P+ ++
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMI 338
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN----ALMEAYRLISRMH--------MGC 314
N + G ++A ++FE+++ P V YN AL E+ +S + G
Sbjct: 339 NFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGI 398
Query: 315 EPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
P +Y+I++D + + E K L E+ K +P
Sbjct: 399 SPSPFTYSILIDGFCKTNRTE-KAMMLLEEMDEKGFP 434
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM + G
Sbjct: 443 LIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLG 502
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ + GL + G +A+ +RM+ C P +Y +++N K A+
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAM 562
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ KP+ +Y ++ A + G+ EEA ++ +++ G + D+ Y++++EA
Sbjct: 563 GMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEA 621
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+ T + +++ + ++ KA A+F +++ P+A YNS I L+ G +K
Sbjct: 151 CVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVH 210
Query: 210 EIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E++ M + C P T TY+ +I+ + K + A+ L NEM+ + +P YT L+
Sbjct: 211 ELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMAL 270
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
+ A +FE+++ PDV+ Y L+ EAY M GC PD
Sbjct: 271 LFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPD 330
Query: 318 RASYNIMVDAYGRAG 332
N M++ G+AG
Sbjct: 331 TVLMNNMINFLGKAG 345
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ +G+L++A R M+ +G P YN ++ L K G P +A+
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAM 562
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ MK+ +P +Y ++ A A KL EM + ++ TY++++ A
Sbjct: 563 GMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAI 622
Query: 270 AR 271
+
Sbjct: 623 GK 624
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ Q M R+ C + + +I + G A A+ +F ++++ KC+P Y +++
Sbjct: 140 KMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIM 199
Query: 269 FAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAY 304
EG E+ E++ ++ G PD Y+AL+ A+
Sbjct: 200 LMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAF 236
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ YG+ ++A L+L+ + P TY L+ A M +A AV++ +
Sbjct: 144 LVDVYGKLGRWERA-IHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD 202
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P++ YN+ I K KA+E++Q M R + S TY+ +I+ KA + A
Sbjct: 203 GYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETA 262
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++FNEM+ C PN TY +LV A A+ G E+A E+FEQ+ G PDV Y AL+ A
Sbjct: 263 LRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALISA 322
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
Y + +M M GC+PD YN ++D G+
Sbjct: 323 YERGGQWQKALQAFGKMCMQGCKPDAIVYNAIIDTLWETGI 363
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ GQ + F L +DSR + ALLLK G +A +F +R
Sbjct: 3 VIIQKLGQNEELPEVIFRALHHVDSRAV------ALLLKDLSRLGKDRRAMELFDWLRSA 56
Query: 184 GLPP------SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
Y + I + + +A+E+ M++ + + T+T ++N+ K
Sbjct: 57 NERSPLRQLCDVYSYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKC 116
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
K +AL+++N MR+ C PN+ TY LV+ + + G E A + + ++ G+EP + Y
Sbjct: 117 GKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTY 176
Query: 298 NALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGR 330
N L+ EA + R + G P+ +YN ++ AYG+
Sbjct: 177 NTLIIACNMCNQPREALAVYQRLLSDGYTPNSTTYNALISAYGK 220
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + S +AE +++ RC PT TY L+ + + L A V +M K G
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG 332
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN +DGL K G ++A E+ + M C P TY++++N K K A
Sbjct: 333 ISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDAR 392
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M C+PN+ T+ +++ F + G +E ++ E ++ PDV Y+ L++ Y
Sbjct: 393 LLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGY 452
Query: 305 RLISRMH-----MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+RM +G PD+ASY+ M+ EG CS VE
Sbjct: 453 CKANRMQDAFAILGISPDKASYSSML---------EGLCSTGKVE 488
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 143 LELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LEL+ + C P TY+ L+ YC + ++ A A+ G+ P Y+S ++GL
Sbjct: 430 LELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCS 483
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++A E+ M + C P++ Y L+I + ALK+ M C+PN+ T
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYT 543
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--------- 312
Y+ L+N + E+A + + + G PDV Y +L++ + I++M
Sbjct: 544 YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603
Query: 313 --GCEPDRASYNIMVDAYGRAG 332
GCEPD+ +YNI++ + ++G
Sbjct: 604 DSGCEPDKLAYNILISGFCQSG 625
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ C+P TY L+ C + L++A + +M++ GL P V YN+ ++GL K
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQ 212
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++ ++ + M +P T +Y ++ ++ K A K+ +M KC P++ TY +
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNS 272
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ F + +EAE + E + G P V Y L+ +AYR++ M G
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG 332
Query: 314 CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
PD +YN ++D +AG E ++ L+E+ V+
Sbjct: 333 ISPDLVTYNCLLDGLCKAGKLEE--AHELLEVMVE 365
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +Y+ +L+ C +G +E+A+ V M K G PP++ Y I GL +A+++
Sbjct: 469 PDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKM 528
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M C+P+ TY+++IN K + A+ + + M C P++ TYT+L++ F +
Sbjct: 529 LQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCK 588
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----GCEPDRAS 320
+ A + F+ ++ +G EPD AYN L+ + + I M + GC PD A+
Sbjct: 589 INKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648
Query: 321 Y 321
Y
Sbjct: 649 Y 649
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L R P T+ +LKAYC G L++A + FR K P+A Y I GL +
Sbjct: 49 EMLARRFSPDVITHNTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQ 106
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++ M + C P Y +I K K A + M C P++ TYT
Sbjct: 107 RIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYT 166
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
+L+ + +EA ++ E+++ +G+ PD AYNAL+ E +L+ M
Sbjct: 167 SLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA 226
Query: 313 GCEPDRASYNIMVDAYGRAGLHE--GKCSYSLVE 344
G EPD SYN +V +G +E GK ++E
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ +C P TY L+ +C +++AE + +M P+ + Y + I G +
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A + + M + P TY +++ KA K A +L M C P++ TY+
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
LVN + G ++A + E + G +P++ +N ++ E ++++ M +
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Query: 313 GCEPDRASYNIMVDAYGRA----------GLHEGKCSYS 341
C PD +Y+ ++D Y +A G+ K SYS
Sbjct: 437 SCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYS 475
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT YAL++ C ++A + + M + G P+ Y+ I+GL K + A+
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAI 561
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M C P TYT +I+ + K +K A + F MR C+P+ Y L++ F
Sbjct: 562 NVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGF 621
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G E+A E+ + + G PD Y +LM +
Sbjct: 622 CQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRS 655
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 105/273 (38%), Gaps = 23/273 (8%)
Query: 71 RFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKW-DPIVLMSCVSILLIEAY 129
RF + NTI A+ DL R K W P C+ LI
Sbjct: 54 RFSPDVITHNTILKAY-------CQIGDLDRALSHFR-GKMWCSPTAFTYCI---LIHGL 102
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
Q +A E++ C P Y L+ C G ++ A V + M + P
Sbjct: 103 CQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDV 162
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+ Y S I G + +A ++ ++MK P T Y ++N K ++ KL E
Sbjct: 163 ITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEE 222
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M +P+ +Y +V G EEA +I E++ PDV YN+LM+ + +S+
Sbjct: 223 MVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSK 282
Query: 310 MHMG-----------CEPDRASYNIMVDAYGRA 331
M C P +Y ++ + RA
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRA 315
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L+++ R C P TY++L+ C + +E A V M + G P Y S IDG K
Sbjct: 529 LQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCK 588
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A + F+ M+ C+P Y ++I+ + ++ A+++ M C P+ T
Sbjct: 589 INKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648
Query: 262 YTALVNAFARE 272
Y +L+ + E
Sbjct: 649 YFSLMRSLTTE 659
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 72/195 (36%), Gaps = 44/195 (22%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDC- 219
FRE PS Y + I G + GN + +EI M K C
Sbjct: 12 FRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQ 71
Query: 220 ----------------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
C P+ TY ++I+ + + A +L +EM C P+ Y
Sbjct: 72 IGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYN 131
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRM-HM 312
L+ + G + A + + + PDV Y NAL EA +L+ +M
Sbjct: 132 CLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES 191
Query: 313 GCEPDRASYNIMVDA 327
G PD +YN +++
Sbjct: 192 GLTPDTVAYNALLNG 206
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 15/140 (10%)
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P + F+ D +PS TY +I + +A S M L++ NEM + + P++ T+
Sbjct: 5 PLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNT 64
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALM----------EAYRLISRM-HM 312
++ A+ + G + + +G P + Y L+ EAY+L+ M
Sbjct: 65 ILKAYCQIG---DLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121
Query: 313 GCEPDRASYNIMVDAYGRAG 332
C PD A YN ++ + G
Sbjct: 122 DCHPDAAVYNCLIAGLCKMG 141
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
+D INV + + L K P V LI+ + + + A + + DS C P +
Sbjct: 558 EDAINV-LDVMLEKGCVPDVA---TYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLA 613
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
Y +L+ +C SG +EKA V + M + G P A Y S + L
Sbjct: 614 YNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P+ TY++L+ +C + +EKA + EM + G PP Y S I+ L K + A E
Sbjct: 404 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANE 463
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+FQ +K +C S Y +MI +GK + A+ LFNEM+ C P++ Y AL+
Sbjct: 464 LFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMV 523
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC-EPDRA 319
R + +EA +F ++ G PD+ ++N ++ A + ++M +PD
Sbjct: 524 RADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAV 583
Query: 320 SYNIMVDAYGRAGLHE 335
SYN ++ RAGL E
Sbjct: 584 SYNTVLGCLSRAGLFE 599
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 14/234 (5%)
Query: 131 QKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
Q+ H+K Y E+ + C P TY+ L+ A+ + A +F EM++ GL P+A
Sbjct: 207 QEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTA 266
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+Y + + K G ++A+ + M+ C P+ TYT +I GK+ + A ++
Sbjct: 267 KIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKN 326
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M CKP++ L+N R +EA E+FE+++ P+V YN ++
Sbjct: 327 MLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKA 386
Query: 302 ---EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
EA + RM G P +Y+I++D + + E K L E+ K +P
Sbjct: 387 PPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVE-KALLLLEEMDEKGFP 439
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA-YCMSGLLEKA 173
+VLM+ LI G+ K+A + E+ C P TY ++K+ + +A
Sbjct: 336 VVLMNN----LINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEA 391
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ M+K G+ PS+ Y+ IDG K +KA+ + + M P Y +IN
Sbjct: 392 SSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINS 451
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
GKA + A +LF E++ + ++ Y ++ F + G EA +F +++ G PD
Sbjct: 452 LGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPD 511
Query: 294 VYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
VYAYNAL+ EA+ L M GC PD S+NI+++ R G
Sbjct: 512 VYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTG 561
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 149/350 (42%), Gaps = 33/350 (9%)
Query: 20 FIDKNGKLRSFNHKK---LSRKRC---GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFV 73
F GK R+F H ++ RC L G+ W+ V + +I++ +
Sbjct: 111 FFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKIL 170
Query: 74 QREVDSNTIWDAFDSLP-----PTHATWDDLINVSVQLRLNKKWDPIVLMSCVS------ 122
R N F + PT T++ +I + +Q ++K + C
Sbjct: 171 GRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPD 230
Query: 123 ----ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
LI A+G+ + A + E+ ++ PT Y L+ Y G +E+A +
Sbjct: 231 TVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVH 290
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EMR P+ Y I GL K G + A +++ M +D C+P +IN+ G++
Sbjct: 291 EMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSD 350
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A++LF EMR C PN+ TY ++ + F + EA E+++ G+ P + Y
Sbjct: 351 RLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTY 410
Query: 298 NALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEG 336
+ L++ + +R+ G P A+Y ++++ G+A +E
Sbjct: 411 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEA 460
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 96/179 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + G+ ++ A + EL ++ + YA+++K + G +A +F EM+K G
Sbjct: 448 LINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLG 507
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ I G+++ +A +F+ M+ + C P ++ +++N + A+
Sbjct: 508 CIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAM 567
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F +M+S KP+ +Y ++ +R GL EEA ++ +++ G E D+ Y++++EA
Sbjct: 568 EMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEA 626
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+++C S LI + + KKA L +S +P TY +L+ YC SG ++KA V
Sbjct: 141 VIACTS--LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV 198
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
M + P V YN+ + L G ++A+E+ R + C P TYT++I
Sbjct: 199 LERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
S A+KL +EMR CKP++ TY L+N +EG +EA + + G +P+V
Sbjct: 256 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVIT 315
Query: 297 YNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+N + M+A RL+S M GC P ++NI+++ R L
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRL 363
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L +A ++ C+P +Y LL +C +++A M
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L K G AVEI ++ C P TY +I+ K K+ A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
++L EMR KP+I TY+ L+ REG +EA +IF ++G I+P YNA+M
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532
Query: 302 -----EAYRLIS----RMHMGCEPDRASYNIMVDA 327
+ R I + GC+P A+Y I+++
Sbjct: 533 LCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD + C P TY +L++A C + +A + EMRK G P V YN I+G
Sbjct: 228 MEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 287
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ K G +A++ M C+P+ T+ +++ + A +L ++M C P+
Sbjct: 288 ICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPS 347
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH 311
+ T+ L+N R+ L A ++ E++ G P+ +YN L+ + R I +
Sbjct: 348 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLE 407
Query: 312 M----GCEPDRASYNIMVDAYGRAG 332
+ GC PD +YN ++ A + G
Sbjct: 408 IMVSRGCYPDIVTYNTLLTALCKDG 432
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEA S +A E+ C P TY +L+ C G L++A M Y
Sbjct: 248 ILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 307
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N + + G A + M R C PS T+ ++IN + A
Sbjct: 308 GCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRA 367
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+ + +M H C PN +Y L++ F +E + A E E + G PD+ YN L+
Sbjct: 368 IDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 427
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
A +++++ GC P +YN ++D + G E
Sbjct: 428 LCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 470
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ ++L++ C +G AE + +M + G PS V +N I+ L + +A+
Sbjct: 309 CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M + C P++ +Y +++ + + K A++ M S C P+I TY L+ A
Sbjct: 369 DVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 428
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDR 318
++G + A EI QL G P + YN +++ A L+ M G +PD
Sbjct: 429 CKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDI 488
Query: 319 ASYNIMVDAYGRAG 332
+Y+ ++ GR G
Sbjct: 489 ITYSTLLRGLGREG 502
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++L C P+ T+ +L+ C LL +A V +M K+G P+++ YN +
Sbjct: 332 AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + +A+E + M C P TY ++ K K A+++ N++ S C P
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TY +++ + G E A E+ E+++ G++PD+ Y+ L+ EA ++
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511
Query: 308 SRMH-MGCEPDRASYNIMV 325
M + +P +YN ++
Sbjct: 512 HDMEGLSIKPSAVTYNAIM 530
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ + Q+ +A YLE++ SR C P TY LL A C G ++ A + ++
Sbjct: 389 LLHGFCQEKKMDRA-IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + YN+ IDGL K G + AVE+ + M+R +P TY+ ++ G+ K A
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEA 507
Query: 244 LKLFNEMRS-----------------------------------HKCKPNICTYTALVNA 268
+K+F++M CKP TYT L+
Sbjct: 508 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Query: 269 FA 270
A
Sbjct: 568 IA 569
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N ++ L++ G ++ ++ +RM P T +I + ++ K+ A ++ + +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
P++ TY L+ + + G ++A E+ E++ + PDV YN ++ E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKE 226
Query: 303 AYRLISR-MHMGCEPDRASYNIMVDA 327
A ++ R + C PD +Y I+++A
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEA 252
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+K L K+A Y E+ C TY + + Y GLLE E + EM G
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+PP V YN+ +D K KA EI + M +P+ TY +M++ K A
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF ++S PNI TY+A+++ + R GL EA ++++++ AG P + AY+ L+E+Y
Sbjct: 249 QLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESY 308
Query: 305 --------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
L M G PD Y ++DAYG+AG
Sbjct: 309 GHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ ++ C T TY +++ Y L+ A + M++ G P ++YN ++GL+
Sbjct: 5 FYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLV 64
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G + A +I MKRD + TYT +I Y + KLF EM+ PN
Sbjct: 65 NSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSW 124
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM 310
TY AL+ + R+GL +EA E+++++ G G DV+ YN + Y RL+ M
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184
Query: 311 HM-GCEPDRASYNIMVDAYGR 330
G PD+ +YN ++D Y +
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAK 205
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+K Y +G L+ +F+EM+ G P++ YN+ I G + G ++A+E++ M
Sbjct: 90 TYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM 149
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C TY + I +YGK +L +EM + P+ TY L++ +A++
Sbjct: 150 DGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYF 209
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+A EI ++ AG P+++ YN ++ EA +L + G P+ +Y+ M
Sbjct: 210 VKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAM 269
Query: 325 VDAYGRAGLH 334
+ YGR GL+
Sbjct: 270 LSLYGRHGLY 279
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLY-GKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A +F RM +D C+ + TYT++I+ Y + SK AL+L M+ KP+ Y LV
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCE 315
N G E AE+I + ++ + ++ Y L++ Y R+ G
Sbjct: 61 NGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGES 120
Query: 316 PDRASYNIMVDAYGRAGL 333
P+ +YN ++ YGR GL
Sbjct: 121 PNSWTYNALIQGYGRKGL 138
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILL 125
A +ILR + IW ++ + A + + + QL N K +V +
Sbjct: 212 AHEILREMTEAGYRPNIWTY--NIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAM 269
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ YG+ L+ +A + E++++ CIP Y+ L+++Y G+ ++A A F++MRK G+
Sbjct: 270 LSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGI 329
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
P +Y + +D K G ++A ++ M ++ P TY +++ + A +
Sbjct: 330 VPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F++ E + I P+ TY++L+ +C + +EKA + EM + G PP Y S ID
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K A E+FQ +K +C S Y +MI GKA + A+ LF+EM C PN
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ Y AL++ AR + +EA ++Q G PD+ +YN ++ A +++
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGLHE 335
M + +PD SYN ++ A AG+ E
Sbjct: 571 NMKNSTIKPDAVSYNTVLSALSHAGMFE 598
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + A E+ ++ PT Y +++ + + A ++F EMR
Sbjct: 236 LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y I GL K G +A + M+R+ C+P T MIN GKA + L
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGL 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF EM C PN+ TY ++ A F + E FE+++G+GI P + Y+ L++
Sbjct: 356 KLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKC 338
+ +R+ G P A+Y ++DA G+A ++ C
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P TY+ L+ A+C G + A + EM++ G+ P+A +Y I K N
Sbjct: 223 EGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVH 282
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ +F+ M+ C+P TYT +I GKA + A ++EM+ CKP+ ++
Sbjct: 283 GALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMI 342
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------EAYRLISRMH-MGC 314
N + G ++ ++FE++ + P+V YN ++ E + RM G
Sbjct: 343 NFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGI 402
Query: 315 EPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
P +Y+I++D + + E K L E+ K +P
Sbjct: 403 SPSPFTYSILIDGFCKTNRIE-KAMMLLEEMDEKGFP 438
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 34/289 (11%)
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL------RLNKKWDPIVL 117
P A++ L + VD + + + D +NV +Q + N + D
Sbjct: 75 PDAERALEVLMLRVDHWLVREVMKT--------DVGVNVKMQFFRWAAKKRNYQHDTSTY 126
Query: 118 MSCVSIL-LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEA 175
M+ + L L+E YG+ + K + E++ S C+ T + +++ + ++ KA
Sbjct: 127 MALIHCLELVEQYGE--MWKMIQ----EMVRSPICVVTPMELSQVIRMLGNAKMIGKAIT 180
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLY 234
+F +++ P+A YNS I L+ G +K E++ M + CQP T TY+ +I+ +
Sbjct: 181 IFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAF 240
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A++L NEM+ + +P YT +++ F + A +FE+++ PDV
Sbjct: 241 CKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDV 300
Query: 295 YAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ Y L+ EAY M GC+PD N M++ G+AG
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAG 349
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 447 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ + GL + +A+ ++M+ C P +Y +++N K A+
Sbjct: 507 CTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAM 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ M++ KP+ +Y +++A + G+ EEA E+ +++ G E D+ Y++++EA
Sbjct: 567 EMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + +A T ++ + C+P ++Y ++L +G +A + M+
Sbjct: 517 LMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST 576
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ P AV YN+ + L G ++A E+ + M + TY+ ++ GK +
Sbjct: 577 IKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A Q S A + E++ S C P TY ++ + G + AE +FRE+ + G
Sbjct: 141 LISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKG 200
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + K G+ + + + R + TY MI++YGK + +AL
Sbjct: 201 FKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLAL 260
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L++EMR+ C P+ TYT L+++ + +A ++ E++ AG++P + ++AL+
Sbjct: 261 GLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAY 320
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA R S M G +PDR +Y +M+D R+G
Sbjct: 321 AKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSG 359
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEA--VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P ++ L+ A SG L A + E+R+ GL P + YN+ I +G N AV
Sbjct: 96 PDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAV 155
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M C+P TY M++++G+ K+ A ++F E+ KP+ TY +L+ AF
Sbjct: 156 AVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAF 215
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
A+EG + E + E+L AG + D YN ++ Y + R+ +GC PD
Sbjct: 216 AKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDA 275
Query: 319 ASYNIMVDAYGR 330
+Y +++D+ G+
Sbjct: 276 VTYTVLIDSLGK 287
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
IL+++A+ + + Y + ++ +P Y ++ C + E + EM +
Sbjct: 698 ILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMER 757
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P + N+ + GN K VE++ + +P+ +TY +I +Y + +
Sbjct: 758 AGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEE 817
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L NEM P + +Y +L+ A + L E+AE++FE+++ G + Y+ LM+
Sbjct: 818 GFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMK 877
Query: 303 AYR-----------LISRMHMGCEPDRASYNIMVDAYGRAG 332
YR L S G EP A+ +I++ +YG AG
Sbjct: 878 IYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAG 918
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ +IEAYG+ L + AE +++ L + L+ AY SGL E A AVF M +
Sbjct: 594 VTMIEAYGKIKLWQHAE-NFVKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIE 652
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P+ N + L+ G + I Q ++ + S T LM++ + KA F
Sbjct: 653 KGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFE 712
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+K++N M+ PN+ Y ++++ R + E + +++ AG EPD+ N L+
Sbjct: 713 VMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLL 772
Query: 302 ------------EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
E Y I + G EP+ +YN ++ Y R
Sbjct: 773 MYTGNGNFDKTVEVYHSI--LEAGLEPNEDTYNTLIVMYSR 811
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ A Y E+ C P TY +L+ + + A V EM G
Sbjct: 246 MIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAG 305
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V +++ I KGG ++AV F M +P Y +M+++ ++ +
Sbjct: 306 LKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLM 365
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE------QLQGAGIEPDVYAYN 298
L+ M + +P+ Y ++ A A+ +E E + + Q+ + +
Sbjct: 366 ALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAE 425
Query: 299 ALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYPA 352
+ + +L+ + + G EPD S ++DAY G HE SL++ +H P+
Sbjct: 426 CISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEE--GLSLLQFIREHVPS 478
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
++ ++ LL+ G + K E Y +L++ P EDTY L+ Y + E+ +
Sbjct: 764 LTILNTLLLMYTGNGNFDKTVE-VYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLL 822
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM K GL P Y S + K ++A ++F+ ++ + + Y +++ +Y A
Sbjct: 823 NEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDA 882
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A +L M+ +P I T L+ ++ G +EAE++ L+ + +E Y
Sbjct: 883 CNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPY 942
Query: 298 NALMEAY-----------RLISRMHMGCEPDRASYNIMVDA 327
+ + AY +L+ G +PD + + A
Sbjct: 943 STVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRA 983
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 45/256 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + ++A T+ ++ S P Y ++L SG + K A+++ M G
Sbjct: 316 LICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDG 375
Query: 185 LPPSAVVYNSYIDGLLKGG------------------NPQKAVEIFQR----------MK 216
P +Y + L KG NPQ I + +K
Sbjct: 376 YRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSILIKAECISQGAKLLK 435
Query: 217 RDCCQ---PSTETYTLMINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFARE 272
+ C Q P +++ +++ Y K L L +R H N+ + +++ +
Sbjct: 436 KACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQ 495
Query: 273 GLCEEAEEI--FEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRA 319
+ +E + L+ D Y L+ EA ++ S M +G EP R
Sbjct: 496 KIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRK 555
Query: 320 SYNIMVDAYGRAGLHE 335
Y M+ AY + G E
Sbjct: 556 IYESMISAYCKLGFPE 571
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR------- 305
H + + A++ +AR G ++ ++ + ++G +EPD+ ++N L+ A
Sbjct: 57 HLPGATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAP 116
Query: 306 ------LISRMHMGCEPDRASYNIMVDA 327
L+ +G PD +YN ++ A
Sbjct: 117 GSAFDLLLEVRQVGLRPDVITYNTLISA 144
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 144 ELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+LL C+ P + +L AY +G E+ ++ + +R++ ++ I L
Sbjct: 432 KLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLL 491
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTET---YTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K A++ + M+ C + Y +I +A A ++F++M+ +
Sbjct: 492 CKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIE 551
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-EAYRLISRMH---- 311
P+ Y ++++A+ + G E A ++ ++ +GI ++ + M EAY I
Sbjct: 552 PSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAEN 611
Query: 312 ----MGCEP--DRASYNIMVDAYGRAGLHE 335
+ EP DR +N ++ AY +GL+E
Sbjct: 612 FVKGLKQEPSIDRRIWNALIHAYAESGLYE 641
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F++ E + I P+ TY++L+ +C + +EKA + EM + G PP Y S ID
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K A E+FQ +K +C S Y +MI GKA + A+ LF+EM C PN
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ Y AL++ AR + +EA ++Q G PD+ +YN ++ A +++
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGLHE 335
M + +PD SYN ++ A AG+ E
Sbjct: 571 NMKNSTIKPDAVSYNTVLSALSHAGMFE 598
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + A E+ ++ PT Y +++ + + A ++F EMR
Sbjct: 236 LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y I GL K G +A + M+R+ C+P T MIN GKA + L
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGL 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF EM C PN+ TY ++ A F + E FE+++G+GI P + Y+ L++
Sbjct: 356 KLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKC 338
+ +R+ G P A+Y ++DA G+A ++ C
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P TY+ L+ A+C G + A + EM++ G+ P+A +Y I K N
Sbjct: 223 EGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVH 282
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ +F+ M+ C+P TYT +I GKA + A ++EM+ CKP+ ++
Sbjct: 283 GALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMI 342
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------EAYRLISRMH-MGC 314
N + G ++ ++FE++ + P+V YN ++ E + RM G
Sbjct: 343 NFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGI 402
Query: 315 EPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
P +Y+I++D + + E K L E+ K +P
Sbjct: 403 SPSPFTYSILIDGFCKTNRIE-KAMMLLEEMDEKGFP 438
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 447 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ + GL + +A+ ++M+ C P +Y +++N K A+
Sbjct: 507 CTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAM 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ M++ KP+ +Y +++A + G+ EEA E+ +++ G E D+ Y++++EA
Sbjct: 567 EMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 34/289 (11%)
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL------RLNKKWDPIVL 117
P A++ L + VD + + + D +NV +Q + N + D
Sbjct: 75 PDAERALEVLMLRVDHWLVREVMKT--------DVGVNVKMQFFRWAAKKRNYQHDTSTY 126
Query: 118 MSCVSIL-LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEA 175
M+ + L L+E YG+ + K + E++ S C+ T + +++ + ++ KA
Sbjct: 127 MALIHCLELVEQYGE--MWKMIQ----EMVRSPICVVTPMELSQVIRMLGNAKMIGKAIT 180
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLY 234
+F +++ P+A YNS I L+ G +K E++ M + C P T TY+ +I+ +
Sbjct: 181 IFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAF 240
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A++L NEM+ + +P YT +++ F + A +FE+++ PDV
Sbjct: 241 CKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDV 300
Query: 295 YAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ Y L+ EAY M C+PD N M++ G+AG
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAG 349
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + +A T ++ + C+P ++Y ++L +G +A + M+
Sbjct: 517 LMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST 576
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ P AV YN+ + L G ++A E+ + M + TY+ ++ GK +
Sbjct: 577 IKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+K L K+A Y E+ C TY + + Y GLLE E + EM G
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+PP V YN+ +D K KA EI + M +P+ TY +M++ K A
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF ++S PNI TY+A+++ + R GL EA ++++++ AG P + AY+ L+E+Y
Sbjct: 249 QLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESY 308
Query: 305 --------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
L M G PD Y ++DAYG+AG
Sbjct: 309 GHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ ++ C T TY +++ Y L+ A + M++ G P ++YN ++GL+
Sbjct: 5 FYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLV 64
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G + A +I MK+D + TYT +I Y A + KLF EM+ PN
Sbjct: 65 NSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSW 124
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM 310
TY AL+ + R+GL +EA E+++++ G G DV+ YN + Y RL+ M
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184
Query: 311 HM-GCEPDRASYNIMVDAYGR 330
G PD+ +YN ++D Y +
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAK 205
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+K Y +G L+ +F+EM+ G P++ YN+ I G + G ++A+E++ M
Sbjct: 90 TYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM 149
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C TY + I +YGK +L +EM + P+ TY L++ +A++
Sbjct: 150 DGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYF 209
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+A EI ++ AG P+++ YN ++ EA +L + G P+ +Y+ M
Sbjct: 210 VKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAM 269
Query: 325 VDAYGRAGLH 334
+ YGR GL+
Sbjct: 270 LSLYGRHGLY 279
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 47/175 (26%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLY--------------------GKASKSFM----- 242
A +F RM +D C+ + TYT++I+ Y GK +
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLV 60
Query: 243 -----------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
A K+ ++M+ K N+ TYT L+ +A G ++ ++F++++ G
Sbjct: 61 NGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGES 120
Query: 292 PDVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
P+ + YNAL++ Y L M +GC D +YNI + YG+ GL E
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLE 175
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILL 125
A +ILR + IW ++ + A + + + QL N K +V +
Sbjct: 212 AHEILREMTEAGYRPNIWTY--NIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAM 269
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ YG+ L+ +A + E++++ CIP Y+ L+++Y G+ ++A A F++MRK G+
Sbjct: 270 LSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGI 329
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
P +Y + +D K G ++A ++ M ++ P TY +++ + A +
Sbjct: 330 VPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 115/222 (51%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A Q S + A + E++ S C P TY ++ + G E+AE +F E+ + G
Sbjct: 299 LISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKG 358
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + K GN K + + + + + TY MI++YGK + +A+
Sbjct: 359 FMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++EMR+ C P+ TYT ++++ + EA ++ E + AG++P + A++AL+ AY
Sbjct: 419 GLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAY 478
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
R + G +PDR +Y +M+D + R+G E
Sbjct: 479 AKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETE 520
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+ + R I P ++ L+ A SG L A+ E+R+ GL P + YN+ I
Sbjct: 244 LDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISAC 303
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N + AV +F+ M C+P TY M++++G+ K+ A +LF E+ P+
Sbjct: 304 SQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDA 363
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM------- 312
TY +L+ AFA+EG ++ E E+L AG + + YN ++ Y + R+ +
Sbjct: 364 VTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 313 ----GCEPDRASYNIMVDAYGR 330
GC PD +Y +M+D+ G+
Sbjct: 424 MRAVGCTPDAVTYTVMIDSLGK 445
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 23/255 (9%)
Query: 89 LPPT-HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
P T H DD + + P+ ++SC +++IEAYG L ++AE L
Sbjct: 725 FPETAHGLMDDALQSGI---------PLNILSC-RVIIIEAYGNIKLWQQAEILVKGLRQ 774
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ I + L+ AY SGL EKA AVF M K G P+ N + L+ G +
Sbjct: 775 ASGIDRR-IWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDE 833
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+ ++ + S T LM++ + KA F +K++N M++ PN+ Y ++ +
Sbjct: 834 LYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTS 893
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI-----------SRMHMGCEP 316
+ E + +++GAG +PD+ +N+L+ Y S + G EP
Sbjct: 894 LLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEP 953
Query: 317 DRASYNIMVDAYGRA 331
D +YN ++ Y R+
Sbjct: 954 DEDTYNTLIVMYCRS 968
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y + C E + EM G P ++NS ++ GN + +
Sbjct: 882 LPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQ 941
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
++Q + +P +TY +I +Y ++ + L NEM P + +Y +L+ A A
Sbjct: 942 VYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASA 1001
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHM-GCEPDRA 319
+ L E+A+++FE+++ + + Y+ +M+ YR L++ M G EP A
Sbjct: 1002 KAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIA 1061
Query: 320 SYNIMVDAYGRAGL-HEGK 337
+ +I++ +YG AG HE +
Sbjct: 1062 TMHILMTSYGTAGQPHEAE 1080
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + Y +L++ P EDTY L+ YC S E+ + EM K G
Sbjct: 926 LLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRG 985
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S + K ++A ++F+ M+ Q + Y +M+ +Y A A
Sbjct: 986 LTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M+ +P I T L+ ++ G EAE + L+ + +E Y+ + +AY
Sbjct: 1046 NLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAY 1105
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDA 327
+L+ G EPD + + A
Sbjct: 1106 LKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRA 1139
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ ++ K E T EL+ + E TY ++ Y G L+ A ++ EMR G
Sbjct: 369 LLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVG 428
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV Y ID L K +A ++ + M +P+ ++ +I Y K + A
Sbjct: 429 CTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAE 488
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K F+ M + KP+ Y +++ FAR G E+ ++ + PD Y L+ A
Sbjct: 489 KTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVA 547
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ A Y E+ C P TY +++ + + +A V +M G
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V +++ I KGG A + F M +P Y +M++++ ++ ++ L
Sbjct: 464 LKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKML 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+L+ M + +P+ Y L+ A A+E CEE EEI + ++
Sbjct: 524 RLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDME 565
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 132 KSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+SL + FT L + R + P +Y LL A + L E+A+ +F EMR +
Sbjct: 967 RSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRS 1026
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y+ + GN KA + MK D +P+ T +++ YG A + A + N +
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSL 1086
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
+S + + Y+ + +A+ + G + + +++ G+EPD + + A L
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASL 1142
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + LL Y +G ++ V++ + + GL P YN+ I + P++ +
Sbjct: 918 PDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTL 977
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + P ++Y ++ KA A +LF EMRS + N Y ++ +
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G +AE + ++ GIEP + + LM +Y + H E
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLP 1097
Query: 321 YNIMVDAYGRAG 332
Y+ + DAY + G
Sbjct: 1098 YSTVFDAYLKNG 1109
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL-KGGNPQKAVEI 211
T D A +++A S +A F + + P S V + + G+L + A E+
Sbjct: 154 TPDEVAFVVRAVGESSW-RRALDAFEWLARSTAPASRAV--AVVLGVLGRARQDSIAEEV 210
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F R + + + + M+ +Y ++ + A +L + M P++ ++ L+NA ++
Sbjct: 211 FLRFAGEGA--TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSK 268
Query: 272 EGLCEE--AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDR 318
G A ++ +++ +G+ PDV YN L+ A S + C PD
Sbjct: 269 SGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDL 328
Query: 319 ASYNIMVDAYGRAGLHE 335
+YN MV +GR G E
Sbjct: 329 WTYNAMVSVHGRCGKAE 345
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A + L ++A+ + E+ Y +++K Y +G KAE + M++ G
Sbjct: 996 LLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDG 1055
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + G P +A + +K + ST Y+ + + Y K + +
Sbjct: 1056 IEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGI 1115
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE---IFEQLQGAGIE 291
K EM+ +P+ +T + A + LCE+ + + + LQ G +
Sbjct: 1116 KKLLEMKRDGVEPDHQVWTCFIRAAS---LCEQTADAILLLKSLQDCGFD 1162
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIV---------LMSCVSILLIEAYGQKSLHKKAE 139
L P ++ L+ S + L ++ D + L + ++++ Y H KAE
Sbjct: 986 LTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAE 1045
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ + PT T +L+ +Y +G +AE V ++ L S + Y++ D
Sbjct: 1046 NLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAY 1105
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
LK G+ ++ MKRD +P + +T I ++ A+ L ++
Sbjct: 1106 LKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ 1157
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 102/180 (56%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY ++ ++KA ++ + D CIP TY ++ GL +AE VF EM++ G
Sbjct: 212 LLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKG 271
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ +D K +A ++ + MKR C P TY ++++ GKA + A+
Sbjct: 272 CTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAM 331
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F+E+++ PN+ +++AL+N + R G EEAE + +++ G P+ AY LM +Y
Sbjct: 332 QIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSY 391
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 14/227 (6%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+CV+I+ I G++ A + + + P+ Y LL Y GLL++A A+F
Sbjct: 32 NCVTIISI--LGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFE 89
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
M++ G P+ + YN+ I+ K V +F+ MK+ QP+ TY M+N
Sbjct: 90 AMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCL 149
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
S A ++ EM++ C PN+ +YT ++N+ R G +EA E+FE+++ G P+ + Y
Sbjct: 150 SLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTY 209
Query: 298 NALMEAYR-----------LISRMHMGCEPDRASYNIMVDAYGRAGL 333
N+L++AY + GC PD +YN ++D GR GL
Sbjct: 210 NSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGL 256
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 20/222 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL-----KAYCMSGLLEKAEAVFRE 179
L+ Y ++ L K+A + + + C P TY L+ +AY + L+ +F E
Sbjct: 71 LLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLV----GLFEE 126
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G+ P+ + YN ++ + A +I + MK C P+ +YT MIN G++ +
Sbjct: 127 MKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGR 186
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A++LF EM+ PN TY +L+ A+AREG E+A +F ++ G PD+Y YN
Sbjct: 187 LDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNT 246
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
++ EA + M GC PDR +YN M+DAY +
Sbjct: 247 VIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSK 288
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVL-MSCVSIL--------LIEAYGQKSLHKKAE 139
+ P T++ ++N V L L I+ M V+ L +I + G+ +A
Sbjct: 132 VQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAV 191
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ E+ + P TY LLKAY G EKA +F M G P YN+ ID
Sbjct: 192 ELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMC 251
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+GG +A +F M+R C P TY M++ Y K S+ A L M+ C P++
Sbjct: 252 GRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDL 311
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-RL----------IS 308
TY L++A + G EA +IF +L+ AG P++ +++AL+ Y RL +
Sbjct: 312 WTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVE 371
Query: 309 RMHMGCEPDRASYNIMVDAYGRAGLHEGKC 338
GC P+ +Y ++++Y G+++ C
Sbjct: 372 MRATGCVPNATAYCGLMNSYSHHGMYKVLC 401
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 166 MSGLLEKAEAVFR---EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
+ G +A VFR E +Y L V + I L + G A EIF+ M + P
Sbjct: 6 IRGARRQALQVFRFLQEHLEYELKEHNCV--TIISILGREGKLGLAREIFEGMSKAGVAP 63
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL-CEEAEEI 281
S YT +++ Y K A LF M+ C PN+ TY L+NA + + +
Sbjct: 64 SVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGL 123
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGR 330
FE+++ AG++P+ YN ++ A +S + C P+ SY M+++ GR
Sbjct: 124 FEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGR 183
Query: 331 AG 332
+G
Sbjct: 184 SG 185
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE + E++ P TY L+ +CM L++A+ +F M
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I+G K +E+F+ M R +T TYT +I+ + +AS A
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+F +M S PNI TY L++ + G E+A +FE LQ + +EPD+Y YN + E
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +PD +YN M+ + + GL E
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 23/263 (8%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD +N+ ++ NK P V I + YG+ S A ++L+ + P T
Sbjct: 257 DDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWS---DASRLLSDMLERKINPNVVT 312
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ L+ A+ G L +AE +F EM + + P+ V YNS I+G +A +IF M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P TY +IN + KA K ++LF +M N TYT L++ F + C+
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCEPDRASYNI 323
A+ +F+Q+ G+ P++ YN L++ + + + M EPD +YNI
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM--EPDIYTYNI 490
Query: 324 MVDAYGRAGLHEGK----CSYSL 342
M + +AG E CS SL
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSL 513
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++ C G + A + +M K + V+Y++ ID L K + A+
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 210 EIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+F M +P TY+ +I+ YG+ S A +L ++M K PN+ T+ +L+
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD---ASRLLSDMLERKINPNVVTFNSLI 317
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CE 315
+AFA+EG EAE++F+++ I+P++ YN+L+ + + R+ C
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 316 PDRASYNIMVDAYGRA 331
PD +YN +++ + +A
Sbjct: 378 PDVVTYNTLINGFCKA 393
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T LL +C + +A A+ +M + G P V + + + GL + +AV +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+RM CQP TY +IN K + +AL L N+M K + ++ Y+ ++++ +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F ++ GI PDV+ Y++L+ +A RL+S M P+ +
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 321 YNIMVDAYGRAG 332
+N ++DA+ + G
Sbjct: 313 FNSLIDAFAKEG 324
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + + + A+ VF++M G+ P+ + YN+ +DGL K G +KA+ +F+ +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ +P TY +M KA K LF + KP++ Y +++ F ++GL
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMGCE--PDRASYNI 323
EEA +F +++ G PD YN L+ A+ LI M C D ++Y +
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR-SCRFAGDASTYGL 595
Query: 324 MVDAYGRAGLHEGKCSYSLVEL 345
+ D LH+G+ +E+
Sbjct: 596 VTDM-----LHDGRLDKGFLEV 612
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 15/188 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ ++ + C ++ A +F EM G+ P Y+S I L G A + M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T+ +I+ + K K A KLF+EM PNI TY +L+N F +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 277 EAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDRASYNI 323
EA++IF + PDV YN L ME +R +SR G + +Y
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR--RGLVGNTVTYTT 420
Query: 324 MVDAYGRA 331
++ + +A
Sbjct: 421 LIHGFFQA 428
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + Q S A+ + +++ P TY LL C +G LEKA VF ++K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN +G+ K G + ++F + +P Y MI+ + K A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
LF +M+ P+ TY L+ A R+G + E+ ++++ D Y + +
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR P+ ++ LL A + + +M G+ + YN I+ L +
Sbjct: 55 EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRS 114
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ I +M + PS T ++N + ++ A+ L ++M +P+ T+T
Sbjct: 115 QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
LV+ + EA + E++ G +PD+ Y A++ A L+++M G
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 234
Query: 314 -CEPDRASYNIMVDA 327
E D Y+ ++D+
Sbjct: 235 KIEADVVIYSTVIDS 249
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ +C GL E+A +F +M++ G P + YN+ I L+ G+ + E+
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 212 FQRMKRDCCQPSTETYTLMINLY--GKASKSFM 242
+ M+ TY L+ ++ G+ K F+
Sbjct: 578 IKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFL 610
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 184 GLPPSAVVYNSYIDGLLKGG----NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+ S + Y+ Y + L + +AV++F M + PS ++ +++ K K
Sbjct: 21 GIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK 80
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ + +M N+ TY ++N R A I ++ G P + N+
Sbjct: 81 FDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS 140
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMV 325
L+ EA L+ +M MG +PD ++ +V
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLLEK + +F EM +G+ PS + + I+ + G + ++
Sbjct: 142 CKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSL 201
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ RMK++ PS TY +IN + + L LF +MR + +I TY L++A
Sbjct: 202 ELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSA 261
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
AR GL +EAE +F + GI PD+ Y+ L+E + ++R+ G PD
Sbjct: 262 CARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPD 321
Query: 318 RASYNIMVDAYGRAG 332
SYN++++A+ ++G
Sbjct: 322 ITSYNVLLEAHAQSG 336
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W++L+ + Q+R IV + L+ A ++ L +AE + + + +P
Sbjct: 233 WEELLGLFAQMRHEGIQADIVTYNT----LLSACARRGLGDEAEMVFRTMNEGGILPDIT 288
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L++ + LEK + +EM G P YN ++ + G+ ++A+ +F++M
Sbjct: 289 TYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY++++NLYG+ + LF EM+ +PN TY L+N F G
Sbjct: 349 QGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYF 408
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+E +F + +EP++ Y L+ +A +++ M+ G P +Y +
Sbjct: 409 KEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGV 468
Query: 325 VDAYGRAGLHE 335
++AYG+A L+E
Sbjct: 469 IEAYGQAALYE 479
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ + +LE+ S P TY +L+ + G ++ +F +M +
Sbjct: 362 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 421
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ Y I KGG + A +I M PS++ YT +I YG+A+ A
Sbjct: 422 NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEA 481
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L FN M KP + TY +L+ FA+ GL +E+E I ++ +G+ + +N ++EA
Sbjct: 482 LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEA 541
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+R + C+PD + ++ Y AGL E
Sbjct: 542 FRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVE 584
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I G++ L +K + + E+ P+ ++ L+ AY +G + + + M
Sbjct: 148 IYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRM 207
Query: 181 RKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+K + PS + YN+ I+ +GG + ++ + +F +M+ + Q TY +++ +
Sbjct: 208 KKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGL 267
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +F M P+I TY+ LV F + E+ E+ ++++ G PD+ +YN
Sbjct: 268 GDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNV 327
Query: 300 LMEAYR----------LISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
L+EA+ + +M GC P+ A+Y+I+++ YGR G ++
Sbjct: 328 LLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYD 374
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ LH+ A+ L + + +P+ Y +++AY + L E+A F M + G
Sbjct: 433 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 492
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS I KGG +++ I +M + + +T+ +I + + + A+
Sbjct: 493 SKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAI 552
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K + EM +C P+ T A+++ + GL EE+EE F +++ GI P V Y ++ Y
Sbjct: 553 KAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVY 612
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 203 GNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ Q+++ +F+ M+R C+P+ YT+MI + G+ ++F+EM SH P++ +
Sbjct: 124 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFS 183
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------EAYRLISRM 310
+TAL+NA+ R G + + E+ ++++ + P + YN ++ E L ++M
Sbjct: 184 FTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQM 243
Query: 311 -HMGCEPDRASYNIMVDAYGRAGL 333
H G + D +YN ++ A R GL
Sbjct: 244 RHEGIQADIVTYNTLLSACARRGL 267
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Query: 104 VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA 163
+ L +N+K +V S +IEAYGQ +L+++A + + + PT +TY L++
Sbjct: 449 ILLHMNEK--GVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQM 506
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+ GL +++EA+ +M + G+ + +N I+ +GG ++A++ + M++ C P
Sbjct: 507 FAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPD 566
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+T ++++Y A + + F E+++ P++ Y ++ +A+ ++A ++ +
Sbjct: 567 EQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLD 626
Query: 284 QL 285
++
Sbjct: 627 EM 628
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 24/235 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
L+ AYG+ + ++A + + +S C P T L+ A GL ++A VF +MR
Sbjct: 87 LVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFDMR 146
Query: 182 ------KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR----DCCQPSTETYTLMI 231
++G P+ + YN ID L K G +++ Q M+ QP++ TY +I
Sbjct: 147 DGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLI 206
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
N GK A +L + M H +P+ TYTAL++A+ + GL E AE F+ ++G +
Sbjct: 207 NACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVS 266
Query: 292 PDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
DV AY A+++AY + M H G P++ +Y +++AYG+AGL E
Sbjct: 267 VDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPE 321
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL------LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
LI+A + L+ +A + ++ L+ C P TY +L+ A C GLL+ V +
Sbjct: 125 LIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQ 184
Query: 179 EMRK----YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
MR + P++ YN+ I+ KGG +KA E+ M QP TYT +I+ Y
Sbjct: 185 YMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAY 244
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GKA A F M+ ++ YTA+++A+ REGL ++AEE+F+ +Q +G+ P+
Sbjct: 245 GKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQ 304
Query: 295 YAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y +LMEAY + + M G E + Y+ ++DAYG+AG
Sbjct: 305 VTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAG 353
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIV-LM--------SC 120
++ +Q D NT S+ P AT++ LIN + L +K + +V LM
Sbjct: 180 MKVLQYMRDGNTD----QSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHI 235
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
LI+AYG+ L + AE T+ + + Y ++ AY GL +KAE +F+ M
Sbjct: 236 TYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMM 295
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ GL P+ V Y S ++ K G P+++ +F M+ + + Y+ +I+ YGKA
Sbjct: 296 QHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNY 355
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
A ++ + MR C+PN+ TY+A++++ + EA+ + +LQ G
Sbjct: 356 LEAARMLDMMRRAGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQVFG 404
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 96/179 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ L++KAE +++ P TY L+ AY +GL E AE F+ M+
Sbjct: 205 LINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTN 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + Y + ID + G QKA E+F+ M+ +P+ TY ++ YGKA +
Sbjct: 265 VSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESR 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+FN MR + N+ Y++L++A+ + G EA + + ++ AG +P++ Y+A++ +
Sbjct: 325 NVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSAILSS 383
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D P TY L+ A GL EKAE + M ++G+ P + Y + ID K G +
Sbjct: 192 DQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWE 251
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A F+ MK YT MI+ YG+ A ++F M+ +PN TY +L+
Sbjct: 252 NAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLM 311
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCE 315
A+ + GL EE+ +F ++ +G E +V Y++L++AY R++ M GC+
Sbjct: 312 EAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQ 371
Query: 316 PDRASYNIMVDA 327
P+ +Y+ ++ +
Sbjct: 372 PNLITYSAILSS 383
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 53/232 (22%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G++ A + E+L +C + TY L+ AY + + E+A AVF M++
Sbjct: 52 LIGFLGREGRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESN 111
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P CQP+T T +I+ K A+
Sbjct: 112 EPN--------------------------------CQPNTVTCNALIDALVKGGLYDQAI 139
Query: 245 KLFNEMRS------HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG----IEPDV 294
++F +MR H C+PN+ TY L++A +EGL + ++ + ++ ++P+
Sbjct: 140 QVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNS 199
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
YN L+ +A L+ M G +PD +Y ++DAYG+AGL E
Sbjct: 200 ATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWE 251
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYTLMINLYGKA 237
M+K+ P S + L + + + +E+F K+ C P++ YT +I G+
Sbjct: 1 MKKHPKPLSPFDITCVLTELQRQHDWRCTLEVFSWSKKQSWYC-PNSRLYTRLIGFLGRE 59
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA---GIEPDV 294
+ A LF EM KC+ + TYTALVNA+ + + EEA +F ++ + +P+
Sbjct: 60 GRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNT 119
Query: 295 YAYNALMEAY-----------------RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
NAL++A + + GCEP+ +YN+++DA + GL
Sbjct: 120 VTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGL 175
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + S + A + E++D P E TY L+ YC L+ A ++ M++ G
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN I GL K N A E+ + M + P+ TYT MI+ K + +AL
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++FN+M C PN+ TY++L+ A +EG EEAE +F +L+ G+ PD Y ++EAY
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680
Query: 305 ----------RLISRM-HMGCEPDRASYNIMV 325
+ RM GC+P +Y +++
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 137 KAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K F L L+ C P TY ++K YC+ G +KA V M + G + V YN+
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G GN A+ I M+ C+P +YT +I + K SK A LFNEM
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
PN TYTAL++ + ++ + A + E ++ +G P+V YN L+ A
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L M G P+ +Y M+D + G
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNG 614
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P E +Y L+ +C +E A +F EM GL P+ V Y + IDG K
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A + + MKR C+P+ +TY ++I+ K + A +L M PN+ TYTA++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCE 315
+ + G A E+F ++ G P++ Y++L+ EA L + + G
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 316 PDRASYNIMVDAYGRAG 332
PD +Y M++AY +G
Sbjct: 668 PDEITYVKMIEAYIMSG 684
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 25/279 (8%)
Query: 75 REVDSNTIWDAFDSLP-----PTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSILL--- 125
R+ D ++ F+ + P T+ LIN + R+N+ +D I M IL
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 126 -----IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
I A ++ A ++++ + C P TY L+ C+SG+L+ A +F M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G+ P+ V YN+ I+ L++ + A + M R+ C P+ TY MI Y
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ + N M N+ TY ++ + G A I + ++ G +PD ++Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 301 MEAYRLISRMHM-----------GCEPDRASYNIMVDAY 328
+ + IS+M G P+ +Y ++D Y
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++ +S P TY ++ +C L+ A VF +M K G P+ V Y++ I+
Sbjct: 234 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 293
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL G +A ++ + M P+ T T I A +LF +M++ C+P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLI 307
N+ TYTAL++ G+ + A +F ++ G+ P+ YNAL+ A+ ++
Sbjct: 354 NVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 413
Query: 308 SRM-HMGCEPDRASYNIMVDAY 328
+ M GC P+ +YN M+ Y
Sbjct: 414 NLMGRNGCSPNIVTYNEMIKGY 435
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A + S C P TY +L+ AE + + M + G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y + IDGL K G+ A+E+F +M C P+ TY+ +I G+ K A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF E+ H P+ TY ++ A+ G E A ++ AG +P ++ Y L++
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Query: 305 R---LISRMHMGCEPD 317
+ L++ + PD
Sbjct: 716 KNEYLLADQRLAALPD 731
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L P Y ++ A C G + AE + +++ + + P Y S I G +
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A+++F +M ++ C+P+T TY+ +IN + + A L EM H P T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
T + A G E+A +F ++ G EP+VY Y AL+ A L RM
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 312 M-GCEPDRASYNIMVD 326
G P+ +YN +++
Sbjct: 383 RDGVFPNTVTYNALIN 398
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ LL G+ + M G+ P+ ++YN+ I+ L K GN A I +++
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T TYT MI + + AL++FN+M C+PN TY+ L+N G
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA ++ ++ GI P + + +A+RL M + GCEP+ +Y ++
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362
Query: 326 DAYGRAGL 333
+G+
Sbjct: 363 SGLCVSGI 370
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ + GL Y++ + L + G ++ + RM + QP+ Y +IN K
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A + ++ + P+ TYT+++ R+ + A ++F Q+ G EP+ Y+
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 300 LM----------EAYRLISRM 310
L+ EA+ LI M
Sbjct: 291 LINGLCDSGRVNEAFDLIREM 311
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + S + A + E++D P E TY L+ YC L+ A ++ M++ G
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN I GL K N A E+ + M + P+ TYT MI+ K + +AL
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++FN+M C PN+ TY++L+ A +EG EEAE +F +L+ G+ PD Y ++EAY
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680
Query: 305 ----------RLISRM-HMGCEPDRASYNIMV 325
+ RM GC+P +Y +++
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 137 KAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K F L L+ C P TY ++K YC+ G +KA V M + G + V YN+
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G GN A+ I M+ C+P +YT +I + K SK A LFNEM
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
PN TYTAL++ + ++ + A + E ++ +G P+V YN L+ A
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L M G P+ +Y M+D + G
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNG 614
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P E +Y L+ +C +E A +F EM GL P+ V Y + IDG K
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A + + MKR C+P+ +TY ++I+ K + A +L M PN+ TYTA++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCE 315
+ + G A E+F ++ G P++ Y++L+ EA L + + G
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 316 PDRASYNIMVDAYGRAG 332
PD +Y M++AY +G
Sbjct: 668 PDEITYVKMIEAYIMSG 684
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 25/279 (8%)
Query: 75 REVDSNTIWDAFDSLP-----PTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSILL--- 125
R+ D ++ F+ + P T+ LIN + R+N+ +D I M IL
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 126 -----IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
I A ++ A ++++ + C P TY L+ C+SGLL+ A +F M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G+ P+ V YN+ I+ L++ + A + M R+ C P+ TY MI Y
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ + N M N+ TY ++ + G A I + ++ G +PD ++Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 301 MEAYRLISRMHM-----------GCEPDRASYNIMVDAY 328
+ + IS+M G P+ +Y ++D Y
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++ +S P TY ++ +C L+ A VF +M K G P+ V Y++ I+
Sbjct: 234 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 293
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL G +A ++ + M P+ T T I A +LF +M++ C+P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLI 307
N+ TYTAL++ GL + A +F ++ G+ P+ YNAL+ A+ ++
Sbjct: 354 NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 413
Query: 308 SRM-HMGCEPDRASYNIMVDAY 328
+ M GC P+ +YN M+ Y
Sbjct: 414 NLMGRNGCSPNIVTYNEMIKGY 435
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A + S C P TY +L+ AE + + M + G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y + IDGL K G+ A+E+F +M C P+ TY+ +I G+ K A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF E+ H P+ TY ++ A+ G E A ++ AG +P ++ Y L++
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Query: 305 R---LISRMHMGCEPD 317
+ L++ + PD
Sbjct: 716 KNEYLLADQRLAALPD 731
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L P Y ++ A C G + AE + +++ + + P Y S I G +
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A+++F +M ++ C+P+T TY+ +IN + + A L EM H P T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
T + A G E+A +F ++ G EP+VY Y AL+ A L RM
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 312 M-GCEPDRASYNIMVD 326
G P+ +YN +++
Sbjct: 383 RDGVFPNTVTYNALIN 398
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ LL G+ + M G+ P+ ++YN+ I+ L K GN A I +++
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T TYT MI + + AL++FN+M C+PN TY+ L+N G
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA ++ ++ GI P + + +A+RL M + GCEP+ +Y ++
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362
Query: 326 DAYGRAGL 333
+GL
Sbjct: 363 SGLCVSGL 370
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ + GL Y++ + L + G ++ + RM + QP+ Y +IN K
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A + ++ + P+ TYT+++ R+ + A ++F Q+ G EP+ Y+
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 300 LM----------EAYRLISRM 310
L+ EA+ LI M
Sbjct: 291 LINGLCDSGRVNEAFDLIREM 311
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + S + A + E++D P E TY L+ YC L+ A ++ M++ G
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN I GL K N A E+ + M + P+ TYT MI+ K + +AL
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++FN+M C PN+ TY++L+ A +EG EEAE +F +L+ G+ PD Y ++EAY
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680
Query: 305 ----------RLISRM-HMGCEPDRASYNIMV 325
+ RM GC+P +Y +++
Sbjct: 681 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 137 KAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K F L L+ C P TY ++K YC+ G +KA V M + G + V YN+
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G GN A+ I M+ C+P +YT +I + K SK A LFNEM
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
PN TYTAL++ + ++ + A + E ++ +G P+V YN L+ A
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L M G P+ +Y M+D + G
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNG 614
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P E +Y L+ +C +E A +F EM GL P+ V Y + IDG K
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A + + MKR C+P+ +TY ++I+ K + A +L M PN+ TYTA++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCE 315
+ + G A E+F ++ G P++ Y++L+ EA L + + G
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 316 PDRASYNIMVDAYGRAG 332
PD +Y M++AY +G
Sbjct: 668 PDEITYVKMIEAYIMSG 684
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 25/279 (8%)
Query: 75 REVDSNTIWDAFDSLP-----PTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSILL--- 125
R+ D ++ F+ + P T+ LIN + R+N+ +D I M IL
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 126 -----IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
I A ++ A ++++ + C P TY L+ C+SGLL+ A +F M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G+ P+ V YN+ I+ L++ + A + M R+ C P+ TY MI Y
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ + N M N+ TY ++ + G A I + ++ G +PD ++Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 301 MEAYRLISRMHM-----------GCEPDRASYNIMVDAY 328
+ + IS+M G P+ +Y ++D Y
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++ +S P TY ++ +C L+ A VF +M K G P+ V Y++ I+
Sbjct: 234 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 293
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL G +A ++ + M P+ T T I A +LF +M++ C+P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLI 307
N+ TYTAL++ GL + A +F ++ G+ P+ YNAL+ A+ ++
Sbjct: 354 NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVL 413
Query: 308 SRM-HMGCEPDRASYNIMVDAY 328
+ M GC P+ +YN M+ Y
Sbjct: 414 NLMGRNGCSPNIVTYNEMIKGY 435
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A + S C P TY +L+ AE + + M + G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y + IDGL K G+ A+E+F +M C P+ TY+ +I G+ K A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF E+ H P+ TY ++ A+ G E A ++ AG +P ++ Y L++
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Query: 305 R---LISRMHMGCEPD 317
+ L++ + PD
Sbjct: 716 KNEYLLADQRLAALPD 731
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L P Y ++ A C G + AE + +++ + + P Y S I G +
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A+++F +M ++ C+P+T TY+ +IN + + A L EM H P T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
T + A G E+A +F ++ G EP+VY Y AL+ A L RM
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 312 M-GCEPDRASYNIMVD 326
G P+ +YN +++
Sbjct: 383 RDGVFPNTVTYNALIN 398
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ LL G+ + M G+ P+ ++YN+ I+ L K GN A I +++
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T TYT MI + + AL++FN+M C+PN TY+ L+N G
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA ++ ++ GI P + + +A+RL M + GCEP+ +Y ++
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362
Query: 326 DAYGRAGL 333
+GL
Sbjct: 363 SGLCVSGL 370
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ + GL Y++ + L + G ++ + RM + QP+ Y +IN K
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A + ++ + P+ TYT+++ R+ + A ++F Q+ G EP+ Y+
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 300 LM----------EAYRLISRM 310
L+ EA+ LI M
Sbjct: 291 LINGLCDSGRVNEAFDLIREM 311
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ +K ++A + L C P TY+ L+ +C + ++A + EM K G
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VYN+ I GL G A+ ++ M+R C PS TYT++++ K+++ A
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDAS 122
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +M C PN+ TY L+N F + G +EA +F Q+ PDV+ YN L++ Y
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ M GCEP+ +YN ++D+ ++G
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + A +++++ C P TY L+ +C G +++A +F +M +
Sbjct: 107 ILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN 166
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P YN IDG K PQ ++ Q M + C+P+ TY +++ K+ K A
Sbjct: 167 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA 226
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L M CKP+ T+ +++ F + G + A E+F+ + G PD+Y YN ++
Sbjct: 227 FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 286
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+A +L+ RM GC PD +YN +V +A
Sbjct: 287 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ TY +L+ A C S + A + +M + G P+ V YN+ I+G K GN +AV
Sbjct: 98 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 157
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F +M + C P TY ++I+ Y K + KL EM + C+PN TY L+++
Sbjct: 158 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
+ G +A + + + +P + +N +++ AY L M GC PD
Sbjct: 218 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 277
Query: 319 ASYNIMVDAYGRA 331
+YNIM+ RA
Sbjct: 278 YTYNIMISGACRA 290
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ D C+P TY +++ C + ++ A + M + G PP V YNS + GL K
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A E+++ ++ T + +I+ K+ + A KL EM + P++ YT
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC 314
L++ F + +++ F ++ G P V Y+ +++ +R+ GC
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 437
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 45/183 (24%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR- 251
N + ++ Q+A ++F+ C P + TY+ +IN + KA A +L +EM
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 252 ---------------------------------SHKCKPNICTYTALVNAFAREGLCEEA 278
C P++ TYT LV+A + +A
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
I E + AG P+V YN L+ EA L ++M C PD +YNI++D
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181
Query: 328 YGR 330
Y +
Sbjct: 182 YCK 184
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LLKA C SG ++ A AV REM +P + VYN IDG + G+ +A E+ Q+M
Sbjct: 676 TYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 735
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K++ QP TYT IN KA A K EM KPNI TYT L++ +AR L
Sbjct: 736 KQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLP 795
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
E+A + F++++ AG++PD Y+ LM + L+SR + E
Sbjct: 796 EKALKCFQEMKSAGLKPDKAVYHCLMTS--LLSRASVAEE 833
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+ D S CIPT T+ L+ +EKA + EM G+ P+ Y + + G
Sbjct: 589 LEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHG 648
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G+ KA E F ++K + + TY ++ K+ + AL + EM S K N
Sbjct: 649 YASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRN 708
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
Y L++ +AR G EA E+ +Q++ G++PD++ Y + + A + I
Sbjct: 709 TFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQ 768
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAGLHE 335
M +G +P+ +Y ++ + RA L E
Sbjct: 769 EMEVVGVKPNIKTYTTLIHGWARASLPE 796
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 116 VLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ MS V+ +L+ + + + + A+ + E + Y ++ A+C + + +AE
Sbjct: 355 IEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAE 414
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ REM + G+ +Y++ +DG GN +K + +F R+K PS +Y +INLY
Sbjct: 415 ALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLY 474
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K K AL++ M K N+ TY+ L+N F R A +FE + G++PDV
Sbjct: 475 IKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDV 534
Query: 295 YAYNALMEAY 304
YN ++ A+
Sbjct: 535 VLYNNIIRAF 544
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A AVF ++ K GL P V+YN+ I GN +A+ + M
Sbjct: 501 TYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 560
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ +P+T T+ +I+ + ++ AL++F+ MR C P + T+ AL+ +
Sbjct: 561 QKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQM 620
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A EI +++ AGI P+ + Y +M Y
Sbjct: 621 EKAVEILDEMSLAGISPNEHTYTTIMHGY 649
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q +AE E+ + D Y ++ Y + G EK VF +++ G
Sbjct: 400 IIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECG 459
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN------------ 232
PS + Y I+ +K G KA+E+ + M+ + + +TY+++IN
Sbjct: 460 FTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAF 519
Query: 233 ----------------LYGKASKSF-------MALKLFNEMRSHKCKPNICTYTALVNAF 269
LY ++F A++ EM+ + +P T+ +++ F
Sbjct: 520 AVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGF 579
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
AR G A EIF+ ++ +G P V+ +NAL+ +A ++ M + G P+
Sbjct: 580 ARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 639
Query: 319 ASYNIMVDAYGRAG 332
+Y ++ Y G
Sbjct: 640 HTYTTIMHGYASLG 653
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++ Y G + A F MR G+ P++ VY S I G + ++A+
Sbjct: 287 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 346
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + K + + A F E + N Y ++ A +
Sbjct: 347 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 406
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRAS 320
+AE + +++ GI+ + Y+ +M+ Y +I G P S
Sbjct: 407 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 466
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 467 YGCLINLYIKIG 478
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + E A+ F+E ++ +A++Y + I + N +A + + M
Sbjct: 361 TYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREM 420
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + + Y M++ Y L +F+ ++ P++ +Y L+N + + G
Sbjct: 421 EEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 480
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
+A E+ + ++ AGI+ ++ Y+ L+ + + + G +PD YN +
Sbjct: 481 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 540
Query: 325 VDAY 328
+ A+
Sbjct: 541 IRAF 544
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +A ++ P TY + A C +G +++A +EM
Sbjct: 714 ILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVV 773
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKAS 238
G+ P+ Y + I G + P+KA++ FQ MK +P Y LM +L +AS
Sbjct: 774 GVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRAS 829
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V+ F+R+K+ PS + + LM+ Y + A F MR+ +P YT
Sbjct: 273 NWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 328
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+L++A+A EEA +++ GIE + Y+ L+ + I+
Sbjct: 329 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIA 373
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L +A ++ C P +Y LL +C +E+A +M
Sbjct: 194 ILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR 253
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L K G AVE+ ++ C P TY +I+ K K+ A
Sbjct: 254 GCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 313
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
KL +EMR+ KP+I TY++LV +REG +EA + F L+ G++P+ YNA+M
Sbjct: 314 AKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLG 373
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A ++ M GC+P ASY I+++ GL
Sbjct: 374 LCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGL 414
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
++ C S LI + + +KA + DS +P TY +L+ C +G AE +
Sbjct: 119 IIPCTS--LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+M + G PS V +N I+ L + G +A+++ ++M + C P++ +Y +++ + K
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
K A++ +M S C P+I TY L+ A ++G + A E+ QL G P +
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296
Query: 297 YNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
YN ++ +A +L+ M G +PD +Y+ +V R G
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREG 343
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE +++ C P+ T+ +L+ C GLL +A V +M K+G P+++ YN +
Sbjct: 173 AEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLH 232
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K ++A+E +M C P TY ++ K K A++L N++ S C P
Sbjct: 233 GFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSP 292
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TY +++ ++ G ++A ++ ++++ G++PD+ Y++L+ EA +
Sbjct: 293 VLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFF 352
Query: 308 SRMH-MGCEPDRASYNIMV 325
+ +G +P+ +YN ++
Sbjct: 353 HDLEVLGVKPNAITYNAIM 371
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 138 AEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
A L L S+ C P TY ++ G ++A + EMR GL P + Y+S +
Sbjct: 277 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLV 336
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL + G +A++ F ++ +P+ TY ++ KA K+ A+ M CK
Sbjct: 337 GGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCK 396
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
P +YT L+ A EGL +EA E+ +L G+
Sbjct: 397 PTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+G LE+ M G P + S I G K G +KA I + ++ P T
Sbjct: 97 NGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVIT 156
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y ++I+ + A KL +M C P++ T+ L+N R+GL A ++ E++
Sbjct: 157 YNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMP 216
Query: 287 GAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
G P+ +YN L+ + ++ SR GC PD +YN ++ A + G
Sbjct: 217 KHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR---GCYPDIVTYNTLLTALCKDG 273
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRL 306
P+I T+L+ F + G +A I E ++ +G PDV YN L M+A +L
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGL 333
++ M GC P ++NI+++ R GL
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGL 204
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N+ + L++ G ++ + M P T +I + K K+ A ++ +
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
P++ TY L++ G +AE++ + G P V +N L+
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAY 328
A ++ +M GC P+ SYN ++ +
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGF 234
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI A+ +++A + ++ + C PT TY ++L + G K ++ +M+
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P A YN+ I +G Q+A ++F+ MK TY ++++YGK+ + A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEA 333
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+K+ NEM + P+I TY +L++A+AR+G+ +EA E+ Q+ G +PDV+ Y L+
Sbjct: 334 MKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 304 Y----RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
+ ++ S M++ GC+P+ ++N + YG G
Sbjct: 394 FERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + SLH++A + E+ + + TY LL Y S ++A V EM G
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNG 344
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YNS I + G +A+E+ +M +P TYT +++ + +A K A+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+F EMR+ CKPNICT+ A + + G + +IF+++ G+ PD+ +N L+
Sbjct: 405 NIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R ++N ++ AY R G E
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 52/326 (15%)
Query: 28 RSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILR-FVQREVDS------- 79
R+ N ++ + R +L GK W Y LSP QQ+LR ++ DS
Sbjct: 71 RNRNRTRIGKSRDPNL-GKPWSYHG---------LSPQGQQVLRSLIEPNFDSGQLDALL 120
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
+ +++ F P +T +L+ L +KK+D L C ++ QK
Sbjct: 121 SELFEPFKDKP--ESTSSELLAFLKGLGFHKKFD---LALCAFDWFMK---QKD------ 166
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
Y +LD+ I A+++ G + A +F +++ G Y S I
Sbjct: 167 --YQSMLDNSVI------AIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAF 218
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL-KLFNEMRSHKCKPN 258
G ++AV +F++M+ + C+P+ TY +++N++GK + + L +M+S P+
Sbjct: 219 ANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD 278
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLIS 308
TY L+ R L +EA ++FE+++ AG D YNAL++ Y ++++
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAGL 333
M + G P +YN ++ AY R G+
Sbjct: 339 EMELNGFSPSIVTYNSLISAYARDGM 364
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ L ++A VF EM+ G V YN+ +D K P++A+++
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ + PS TY +I+ Y + A++L N+M KP++ TYT L++ F R
Sbjct: 337 LNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
G E A IFE+++ AG +P++ +NA ++ Y + + M + G PD +
Sbjct: 397 AGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVT 456
Query: 321 YNIMVDAYGRAGL 333
+N ++ +G+ G+
Sbjct: 457 WNTLLAVFGQNGM 469
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 46/251 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ K+A E+ + P+ TY L+ AY G+L++A + +M + G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y + + G + G + A+ IF+ M+ C+P+ T+ I +YG K +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ------------------ 286
K+F+E+ P+I T+ L+ F + G+ E +F++++
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 287 -----------------GAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDR 318
AG+ PD+ YN ++ A ++++ M G C+P+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 319 ASYNIMVDAYG 329
+Y ++ AY
Sbjct: 560 LTYCSLLHAYA 570
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC---------------MSGL 169
++ A + + +++E E+ D RC P E TY LL AY SG+
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 170 LE--------------------KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
+E +AE F E+++ G P NS + + KA
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKAN 649
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ MK PS TY ++ ++ +++ + ++ E+ + KP+I +Y ++ A+
Sbjct: 650 EVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDR 318
R +A IF +++ +GI PDV YN + +Y S + GC P++
Sbjct: 710 CRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 319 ASYNIMVDAY 328
+YN +VD Y
Sbjct: 770 NTYNSIVDGY 779
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ + + + E+ + +P +T+ L+ AY G E+A V+R M G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ + L +GG +++ ++ M+ C+P+ TY +++ Y + +
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L E+ S +P LV ++ L EAE F +L+ G PD+ N+++ Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 305 ---RLISRMH--------MGCEPDRASYNIMVDAYGRAG 332
+++ + + G P A+YN ++ + R+
Sbjct: 640 GRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C I+ YG + + E+ P T+ LL + +G+ + VF+E
Sbjct: 420 CTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P +N+ I + G+ ++A+ +++RM P TY ++ +
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ K+ EM +CKPN TY +L++A+A + E++ IEP
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
L+ EA R S + G PD + N MV YGR
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L +AE + EL + P T ++ Y ++ KA V M++ G PS YN
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYN 668
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S + + + K+ EI + + +P +Y +I Y + ++ A ++F+EMR
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDS 728
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
P++ TY + ++A + + EEA + + G P+ YN++++ Y ++R
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D L S VSI YG++ + KA + + P+ TY L+ + S K
Sbjct: 628 DITTLNSMVSI-----YGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
+E + RE+ G+ P + YN+ I + + A IF M+ P TY I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIG 742
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y S A+ + M H C+PN TY ++V+ + + +EA+ E L+
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A + F + K ++I++ GK + A LFN ++ ++ +YT+L++
Sbjct: 157 AFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLIS 216
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHM-GCE 315
AFA G EA +F++++ G +P + YN ++ + L+ +M G
Sbjct: 217 AFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276
Query: 316 PDRASYNIMVDAYGRAGLHE 335
PD +YN ++ R LH+
Sbjct: 277 PDAYTYNTLITCCKRGSLHQ 296
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
++ C S LI + + KKA + L S +P TY +L+ YC SG ++ A V
Sbjct: 149 IIPCTS--LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
M + P V YN+ + L G ++A+E+ R + C P TYT++I K
Sbjct: 207 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
S A+KL +EMR+ KP++ TY L+N +EG +EA + + G +P+V
Sbjct: 264 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 323
Query: 297 YNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+N + M+A +L+S M GC P ++NI+++ R GL
Sbjct: 324 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 371
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y LL +C +++A M G P V YN+ + L K G AV
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI ++ C P TY +I+ K K+ A+KL +EMR KP+I TY++LV+
Sbjct: 447 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------------EAYRLISRMHMGC 314
+REG +EA + F L+G GI P+ YN++M AY + R C
Sbjct: 507 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR----C 562
Query: 315 EPDRASYNIMVDAYGRAGL 333
+P A+Y I+++ GL
Sbjct: 563 KPTEATYTILIEGIAYEGL 581
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD + C P TY +L++A C + +A + EMR G P V YN I+G
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 295
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ K G +A++ M CQP+ T+ +++ + A KL ++M C P+
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH 311
+ T+ L+N R+GL A +I E++ G P+ +YN L+ + R I +
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 312 M----GCEPDRASYNIMVDAYGRAG 332
+ GC PD +YN ++ A + G
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDG 440
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ ++L++ C +G AE + +M + G PS V +N I+ L + G +A+
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 376
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+I ++M C P++ +Y +++ + K K A++ + M S C P+I TY L+ A
Sbjct: 377 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDR 318
++G + A EI QL G P + YN +++ A +L+ M G +PD
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496
Query: 319 ASYNIMVDAYGRAG 332
+Y+ +V R G
Sbjct: 497 ITYSSLVSGLSREG 510
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEA ++S +A E+ + P TY +L+ C G L++A M Y
Sbjct: 256 ILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 315
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N + + G A ++ M R C PS T+ ++IN + A
Sbjct: 316 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 375
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+ + +M H C PN +Y L++ F +E + A E + + G PD+ YN L+
Sbjct: 376 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 435
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
A +++++ GC P +YN ++D + G E
Sbjct: 436 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++L C P+ T+ +L+ C GLL +A + +M +G P+++ YN +
Sbjct: 340 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K +A+E M C P TY ++ K K +A+++ N++ S C P
Sbjct: 400 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TY +++ ++ G E A ++ ++++ G++PD+ Y++L+ EA +
Sbjct: 460 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 519
Query: 308 SRMH-MGCEPDRASYN 322
+ +G P+ +YN
Sbjct: 520 HDLEGLGIRPNAITYN 535
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YL+++ SR C P TY LL A C G ++ A + ++ G P + YN+ IDGL
Sbjct: 413 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 472
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE----------- 249
K G ++A+++ M+R +P TY+ +++ + K A+K F++
Sbjct: 473 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 532
Query: 250 ------------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M S +CKP TYT L+ A EGL +EA ++ +L
Sbjct: 533 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592
Query: 286 QGAGI 290
G+
Sbjct: 593 CSRGL 597
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P+I T+L+ F R G ++A + E L+ +G PDV YN L+ Y ++
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
+ RM++ PD +YN ++ +G
Sbjct: 207 LDRMNVA--PDVVTYNTILRTLCDSG 230
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L++ G + + + M P T +I + + K+ A + + P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ TY L++ + + G + A ++ +++ + PDV YN ++ +A ++
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 309 R-MHMGCEPDRASYNIMVDA 327
R + C PD +Y I+++A
Sbjct: 241 RQLQKECYPDVITYTILIEA 260
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 18/222 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRC---IPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
L+ A+ +K KKA+ Y + RC P TY+ L+ +C + ++A + EM
Sbjct: 138 LLSAFVRK---KKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 194
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K G+ P VYN+ I GL G A+ ++ M+R+ C PS TYT++++ K+++
Sbjct: 195 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILVDALCKSARIS 253
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A + +M C PN+ TY L+N F + G +EA +F Q+ PDV+ YN L+
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313
Query: 302 EAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ Y +L+ M GCEP+ +YN ++D+ ++G
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + A +++++ C P TY L+ +C G +++A +F +M +
Sbjct: 241 ILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN 300
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P YN IDG K PQ ++ Q M + C+P+ TY +++ K+ K A
Sbjct: 301 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA 360
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L M CKP+ T+ +++ F + G + A E+F+ + G PD+Y YN ++
Sbjct: 361 FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 420
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+A +L+ RM GC PD +YN +V +A
Sbjct: 421 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 459
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ TY +L+ A C S + A + +M + G P+ V YN+ I+G K GN +AV
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F +M + C P TY ++I+ Y K + KL EM + C+PN TY L+++
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
+ G +A + + + +P + +N +++ AY L M GC PD
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411
Query: 319 ASYNIMVDAYGRA 331
+YNIM+ RA
Sbjct: 412 YTYNIMISGACRA 424
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + K+ + E+LD C+PT TY++++ C S + + + M +
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P A+VY S IDGL K + +A E+++ MK+ C P+ TY ++++ K S+ A
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ L M S C P+ TY ++ + F + ++A +F+ ++ G P + Y+ L+
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLL 698
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T + L+ C S L+ AE + REM + G P V Y I G K K++ F M
Sbjct: 483 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C P+ TY+++I+ K+++ L M P+ YT++++ +
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSY 602
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----HM-------GCEPDRASYNIM 324
+EA E+++ ++ G P V YN L++ +SR+ H+ GC PD +YN +
Sbjct: 603 DEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662
Query: 325 VDAYGRAGLHE 335
D + ++ H+
Sbjct: 663 FDGFWKSAEHD 673
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 46/228 (20%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ D C+P TY +++ C + ++ A + M + G PP V YNS + GL K
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 205 PQKAVEIFQ-----------------------------------RMKRDCCQPSTETYTL 229
+A E+++ M+R+ P YT+
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ + KA + +L F+EM C P + TY+ +++ + + + + + G
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVD 326
+ PD Y +++ EAY L M GC P +YN++VD
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD 629
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +L+ +C + L+K+ A F EM G P+ + Y+ ID L K + +
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P YT +I+ K+ A +L+ M+ C P + TY LV+ +
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRAS 320
+EA + E ++ G PD YN++ + A+RL M GC P
Sbjct: 634 VSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFM 693
Query: 321 YNIMV 325
Y++++
Sbjct: 694 YSLLL 698
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 45/190 (23%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G S N + ++ Q+A ++F+ + C P + TY+ +IN + KA A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 244 LKLFNEMR----------------------------------SHKCKPNICTYTALVNAF 269
+L +EM C P++ TYT LV+A
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDAL 246
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ +A I E + AG P+V YN L+ EA L ++M C PD
Sbjct: 247 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDV 306
Query: 319 ASYNIMVDAY 328
+YNI++D Y
Sbjct: 307 FTYNILIDGY 316
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + + +A Y + + C PT TY +L+ C L++A + M G
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDG 651
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YNS DG K KA +FQ MK C P+ Y+L++ K A+
Sbjct: 652 CLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAM 711
Query: 245 KLFNE 249
+++ E
Sbjct: 712 EIWEE 716
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LLKA C SG ++ A AV REM +P + VYN IDG + G+ +A E+ Q+M
Sbjct: 655 TYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 714
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K++ QP TYT IN KA A K EM KPNI TYT L++ +AR L
Sbjct: 715 KQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLP 774
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
E+A + F++++ AG++PD Y+ LM + L+SR + E
Sbjct: 775 EKALKCFQEMKSAGLKPDKAVYHCLMTS--LLSRASVAEE 812
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+ D S CIPT T+ L+ +EKA + EM G+ P+ Y + + G
Sbjct: 568 LEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHG 627
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G+ KA E F ++K + + TY ++ K+ + AL + EM S K N
Sbjct: 628 YASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRN 687
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
Y L++ +AR G EA E+ +Q++ G++PD++ Y + + A + I
Sbjct: 688 TFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQ 747
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAGLHE 335
M +G +P+ +Y ++ + RA L E
Sbjct: 748 EMEVVGVKPNIKTYTTLIHGWARASLPE 775
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 116 VLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ MS V+ +L+ + + + + A+ + E + Y ++ A+C + + +AE
Sbjct: 334 IEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAE 393
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ REM + G+ +Y++ +DG GN +K + +F R+K PS +Y +INLY
Sbjct: 394 ALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLY 453
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K K AL++ M K N+ TY+ L+N F R A +FE + G++PDV
Sbjct: 454 IKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDV 513
Query: 295 YAYNALMEAY 304
YN ++ A+
Sbjct: 514 VLYNNIIRAF 523
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A AVF ++ K GL P V+YN+ I GN +A+ + M
Sbjct: 480 TYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 539
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ +P+T T+ +I+ + ++ AL++F+ MR C P + T+ AL+ +
Sbjct: 540 QKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQM 599
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A EI +++ AGI P+ + Y +M Y
Sbjct: 600 EKAVEILDEMSLAGISPNEHTYTTIMHGY 628
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q +AE E+ + D Y ++ Y + G EK VF +++ G
Sbjct: 379 IIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECG 438
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN------------ 232
PS + Y I+ +K G KA+E+ + M+ + + +TY+++IN
Sbjct: 439 FTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAF 498
Query: 233 ----------------LYGKASKSF-------MALKLFNEMRSHKCKPNICTYTALVNAF 269
LY ++F A++ EM+ + +P T+ +++ F
Sbjct: 499 AVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGF 558
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
AR G A EIF+ ++ +G P V+ +NAL+ +A ++ M + G P+
Sbjct: 559 ARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 618
Query: 319 ASYNIMVDAYGRAG 332
+Y ++ Y G
Sbjct: 619 HTYTTIMHGYASLG 632
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++ Y G + A F MR G+ P++ VY S I G + ++A+
Sbjct: 266 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 325
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + K + + A F E + N Y ++ A +
Sbjct: 326 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 385
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRAS 320
+AE + +++ GI+ + Y+ +M+ Y +I G P S
Sbjct: 386 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 445
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 446 YGCLINLYIKIG 457
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + E A+ F+E ++ +A++Y + I + N +A + + M
Sbjct: 340 TYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREM 399
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + + Y M++ Y L +F+ ++ P++ +Y L+N + + G
Sbjct: 400 EEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 459
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
+A E+ + ++ AGI+ ++ Y+ L+ + + + G +PD YN +
Sbjct: 460 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 519
Query: 325 VDAY 328
+ A+
Sbjct: 520 IRAF 523
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +A ++ P TY + A C +G +++A +EM
Sbjct: 693 ILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVV 752
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKAS 238
G+ P+ Y + I G + P+KA++ FQ MK +P Y LM +L +AS
Sbjct: 753 GVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRAS 808
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V+ F+R+K+ PS + + LM+ Y + A F MR+ +P YT
Sbjct: 252 NWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 307
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+L++A+A EEA +++ GIE + Y+ L+ + I+
Sbjct: 308 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIA 352
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 31/224 (13%)
Query: 140 FTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
FTY L+D+ C P TY+ ++ Y G E+A ++ +
Sbjct: 341 FTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHD 400
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G+ P V YN+ ID K G A+ + M+R + TY +I+ YGK K
Sbjct: 401 MKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGK 460
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A LF++M++ PN+ TY+AL++A+++ G+ ++A IF + + AG++PDV Y++
Sbjct: 461 YKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSS 520
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ +A L+ M G +P+ +YN ++DAYGR G
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNG 564
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 125 LIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + KKA + E+ P T+ L+ L E ++ VF EM++
Sbjct: 275 IIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRR 334
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN+ ID + KGG + A I M+ P+ TY+ MI+ YGK A
Sbjct: 335 GIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEA 394
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L+++M+ +P+ +Y L++ +A+ G ++A + ++ G++ DV YNAL++A
Sbjct: 395 IGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDA 454
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCS 339
Y L +M G P+ +Y+ ++DAY +AG+H+ S
Sbjct: 455 YGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATS 501
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
++ AYG+ ++A + + + C P TY ++ A G+ L+KA +F EM+K
Sbjct: 240 MVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKE 299
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + +NS I +G + + +F M+R + TY +I+ K + +A
Sbjct: 300 GVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELA 359
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + MR PN+ TY+ +++ + + G EEA ++ ++ +G+ PD +YN L++
Sbjct: 360 ASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDI 419
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
Y + R +G + D +YN ++DAYG+ G
Sbjct: 420 YAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQG 459
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 97/180 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ YG+ ++A Y ++ +S P +Y L+ Y G + A ++M + G
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V YN+ ID K G + A +F +MK + P+ TY+ +I+ Y KA A
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F E + KP++ Y++L+++ + GL E+A + +++ AGI+P++ YN+L++AY
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 560
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 13/223 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI + SL + ++ + E+ R I + TY L+ A C G +E A ++ MR
Sbjct: 311 LIAVCSRGSLWEDSQRVFAEM-QRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLK 369
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ V Y++ IDG K G ++A+ ++ MK +P +Y +I++Y K + A
Sbjct: 370 NISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDA 429
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M K ++ TY AL++A+ ++G ++A +F++++ G+ P+V Y+AL++A
Sbjct: 430 LTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDA 489
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
Y + G +PD Y+ ++D+ + GL E
Sbjct: 490 YSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVE 532
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQR 214
Y+ ++ AY SG +A VF+ M+K G P+ + YN+ ID KGG + +KA++IF+
Sbjct: 236 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEE 295
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M+++ +P T+ +I + + S + ++F EM+ + +I TY L++A + G
Sbjct: 296 MQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQ 355
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRASYNI 323
E A I ++ I P+V Y+ +++ Y I H G PDR SYN
Sbjct: 356 MELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNT 415
Query: 324 MVDAYGRAG 332
++D Y + G
Sbjct: 416 LIDIYAKLG 424
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G +E A VF +K G + Y++ + + G ++A+++FQ MK+ C+P+ TY
Sbjct: 213 GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITY 272
Query: 228 TLMINLYGKASKSF-MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+I+ GK AL +F EM+ +P+ T+ +L+ +R L E+++ +F ++Q
Sbjct: 273 NTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQ 332
Query: 287 GAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
GIE D++ YN L++A ++S M + P+ +Y+ M+D YG+ G E
Sbjct: 333 RRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFE 392
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 55/265 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG++ +K A + ++ +P TY+ L+ AY +G+ + A ++F E ++ G
Sbjct: 451 LIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG 510
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK-------- 236
L P V+Y+S ID K G + AV + Q M + QP+ TY +I+ YG+
Sbjct: 511 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVE 570
Query: 237 ASKSFMALKLFN----------------------------------EMRSHKCKPNICTY 262
A+K M + +FN EM+ KPN+ T+
Sbjct: 571 AAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTF 630
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY--AYNALM--------EAYRLISRM-H 311
+A++NA +R +EA + EQ++ + VY A+ LM EA RL +
Sbjct: 631 SAILNACSRCSSLQEASVLLEQMR--FFDSWVYGIAHGLLMGLREHVWVEAQRLFDEIAR 688
Query: 312 MGCEPDRASYNIMVDAYGRAGLHEG 336
M A YN + D G +G
Sbjct: 689 MDYATGAAFYNALTDVLWHFGQRQG 713
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
++MI+ G+ K +AL +FN + N+ Y+A+V+A+ R G C EA ++F+ ++
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262
Query: 288 AGIEPDVYAYNALME-----------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
AG +P++ YN +++ A + M G EPDR ++N ++ R L E
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 34/292 (11%)
Query: 70 LRFVQREVDSNTIWDAFDS--LPPTHATWDDLINVSVQ------------LRLNKK---W 112
L + QR D+ +++A ++ + P H T +I + + ++N+K W
Sbjct: 272 LLYCQRYDDACKVYEAMEAQNVSPDHVTCSIMITMMRKNGRSAKEAWEFFEKMNRKGVKW 331
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
P +L + L++++ + L +A +E+ Y L+ AY S +E+
Sbjct: 332 SPEILGA-----LVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVYNTLMDAYNKSNQIEE 386
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
E +F EM+ GL P++ +N +D + P+ E+ M+ QP ++YT +I+
Sbjct: 387 VEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQDAGLQPDAKSYTCLIS 446
Query: 233 LYGKASK-SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
YG+ +K + MA F M+ KP +YTAL++A++ G E+A FE +Q GI+
Sbjct: 447 AYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHEKAYSTFENMQTEGIK 506
Query: 292 PDVYAYNALMEAYR---------LISRMHMG--CEPDRASYNIMVDAYGRAG 332
P + Y AL++A+R I +M M E R ++NI++D + + G
Sbjct: 507 PSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQG 558
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AYG Q + A +L + PT +Y L+ AY +SG EKA + F M+
Sbjct: 444 LISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHEKAYSTFENMQTE 503
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS Y + +D + G+ Q + I++ M + + + T+ ++++ + K A
Sbjct: 504 GIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEA 563
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +E P + TY L+NA+AR G + ++ +++ ++PD Y ++ A
Sbjct: 564 RDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMATLNLKPDSITYLTMIYA 623
Query: 304 Y 304
Y
Sbjct: 624 Y 624
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 49/197 (24%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K++C GL +A + EM K G +A+VYN+ +D
Sbjct: 339 LVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVYNTLMDA--------------------- 377
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
Y K+++ +F EM++ KP T+ L++A++R E E
Sbjct: 378 --------------YNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVE 423
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRM------------HMGCEPDRASYNIMVDA 327
E+ ++Q AG++PD +Y L+ AY ++M +G +P SY ++ A
Sbjct: 424 ELLLEMQDAGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHA 483
Query: 328 YGRAGLHEGKCSYSLVE 344
Y +G HE +YS E
Sbjct: 484 YSVSGWHEK--AYSTFE 498
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY H+KA T+ + P+ +TY LL A+ SG + +++ M
Sbjct: 480 LIHAYSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEK 539
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V +N +DG K G+ +A ++ + P+ TY +++N Y + +
Sbjct: 540 VEGTRVTFNILLDGFAKQGHYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLP 599
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+L EM + KP+ TY ++ A+ R A + + +G PD +Y L
Sbjct: 600 QLLKEMATLNLKPDSITYLTMIYAYIRVRDFRRAFFYHKTMVKSGQVPDAKSYEKL 655
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-ALKLFNE 249
VYN+ + GLL A ++++ M+ P T ++MI + K +S A + F +
Sbjct: 264 VYNASLSGLLYCQRYDDACKVYEAMEAQNVSPDHVTCSIMITMMRKNGRSAKEAWEFFEK 323
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M K + ALV +F EGL EA I ++ G + YN LM+AY ++
Sbjct: 324 MNRKGVKWSPEILGALVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVYNTLMDAYNKSNQ 383
Query: 310 MH-----------MGCEPDRASYNIMVDAYGR 330
+ G +P A++NI++DAY R
Sbjct: 384 IEEVEGIFAEMKAKGLKPTSATFNILMDAYSR 415
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
++ C S LI + + KKA + L S +P TY +L+ YC SG ++ A V
Sbjct: 92 IIPCTS--LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
M + P V YN+ + L G ++A+E+ R + C P TYT++I K
Sbjct: 150 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
S A+KL +EMR+ KP++ TY L+N +EG +EA + + G +P+V
Sbjct: 207 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 266
Query: 297 YNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+N + M+A +L+S M GC P ++NI+++ R GL
Sbjct: 267 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 314
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y LL +C +++A M G P V YN+ + L K G AV
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI ++ C P TY +I+ K K+ A+KL +EMR KP+I TY++LV+
Sbjct: 390 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------------EAYRLISRMHMGC 314
+REG +EA + F L+G GI P+ YN++M AY + R C
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR----C 505
Query: 315 EPDRASYNIMVDAYGRAGL 333
+P A+Y I+++ GL
Sbjct: 506 KPTEATYTILIEGIAYEGL 524
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD + C P TY +L++A C + +A + EMR G P V YN I+G
Sbjct: 179 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 238
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ K G +A++ M CQP+ T+ +++ + A KL ++M C P+
Sbjct: 239 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 298
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH 311
+ T+ L+N R+GL A +I E++ G P+ +YN L+ + R I +
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 312 M----GCEPDRASYNIMVDAYGRAG 332
+ GC PD +YN ++ A + G
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDG 383
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ ++L++ C +G AE + +M + G PS V +N I+ L + G +A+
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 319
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+I ++M C P++ +Y +++ + K K A++ + M S C P+I TY L+ A
Sbjct: 320 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDR 318
++G + A EI QL G P + YN +++ A +L+ M G +PD
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439
Query: 319 ASYNIMVDAYGRAG 332
+Y+ +V R G
Sbjct: 440 ITYSSLVSGLSREG 453
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEA ++S +A E+ + P TY +L+ C G L++A M Y
Sbjct: 199 ILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 258
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N + + G A ++ M R C PS T+ ++IN + A
Sbjct: 259 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 318
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+ + +M H C PN +Y L++ F +E + A E + + G PD+ YN L+
Sbjct: 319 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 378
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
A +++++ GC P +YN ++D + G E
Sbjct: 379 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++L C P+ T+ +L+ C GLL +A + +M +G P+++ YN +
Sbjct: 283 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 342
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K +A+E M C P TY ++ K K +A+++ N++ S C P
Sbjct: 343 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TY +++ ++ G E A ++ ++++ G++PD+ Y++L+ EA +
Sbjct: 403 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 462
Query: 308 SRMH-MGCEPDRASYN 322
+ +G P+ +YN
Sbjct: 463 HDLEGLGIRPNAITYN 478
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YL+++ SR C P TY LL A C G ++ A + ++ G P + YN+ IDGL
Sbjct: 356 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 415
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE----------- 249
K G ++A+++ M+R +P TY+ +++ + K A+K F++
Sbjct: 416 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 475
Query: 250 ------------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M S +CKP TYT L+ A EGL +EA ++ +L
Sbjct: 476 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535
Query: 286 QGAGI 290
G+
Sbjct: 536 CSRGL 540
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P+I T+L+ F R G ++A + E L+ +G PDV YN L+ Y ++
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
+ RM++ PD +YN ++ +G
Sbjct: 150 LDRMNVA--PDVVTYNTILRTLCDSG 173
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L++ G + + + M P T +I + + K+ A + + P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ TY L++ + + G + A ++ +++ + PDV YN ++ +A ++
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 309 R-MHMGCEPDRASYNIMVDA 327
R + C PD +Y I+++A
Sbjct: 184 RQLQKECYPDVITYTILIEA 203
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ K+A ++ + P+ TY L+ AY GLLE A + R+M G
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG 350
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + + G + G + A+E+F+ M++ C+P+ T+ +I +YG K +
Sbjct: 351 IKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMV 410
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F E++ KC P+I T+ L+ F + G+ E +FE+++ + P+ +N L+ AY
Sbjct: 411 KVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAY 470
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
RM G PD ++YN ++ R GL E
Sbjct: 471 GRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWE 512
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVLMS------------CVSILLIEAYGQKSLHKKA 138
PT T++ ++NV ++ + W I+ + C LI SL+++A
Sbjct: 212 PTLITYNAILNVYGKMGM--PWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEA 269
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ E+ + P TY LL Y S ++A V ++M PS V YNS +
Sbjct: 270 LDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSA 329
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
++GG + A+ + ++M +P TYT +++ + A K +A+++F EMR CKPN
Sbjct: 330 YVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPN 389
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE--- 315
ICT+ AL+ + G EE ++F++++ PD+ +N L+ + + M E
Sbjct: 390 ICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVF---GQNGMDSEVSG 446
Query: 316 -----------PDRASYNIMVDAYGRAG 332
P+R ++N ++ AYGR G
Sbjct: 447 VFEEMKRSRFAPERDTFNTLISAYGRCG 474
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 62 LSPTAQQILR-FVQREVDSNTIWDA----FDSLPPTHATWDDLINVSVQLRLNKKWDPIV 116
LSP A +IL+ + DSN + FD + +WD ++ + L N K+D +
Sbjct: 68 LSPQAHRILQTLIHPSFDSNRFHEILPLLFDQPSSSSLSWD-ILGIIKGLGFNNKFD--L 124
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+S + + + LL+ I A+++ +G + +A ++
Sbjct: 125 ALSLFDFI------------RTRNDRVSLLNGSVI------AVIVSILGKTGRVSRAASL 166
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ G Y S I + A+++F +MK C+P+ TY ++N+YGK
Sbjct: 167 LHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGK 226
Query: 237 ASKSFMA-LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+ + L +M+ H P++CTY L++ L EEA ++FE+++ AG PD
Sbjct: 227 MGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAV 286
Query: 296 AYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHE 335
YNAL++ Y R E P +YN +V AY R GL E
Sbjct: 287 TYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLE 337
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 46/257 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ + + + E+ SR P DT+ L+ AY G ++A A ++ M + G
Sbjct: 431 LLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAG 490
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--GKASKSFM 242
+ P YN+ + L +GG +++ ++ MK C+P+ TY+ +++ Y G+ +
Sbjct: 491 VSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMN 550
Query: 243 AL---------------------------------KLFNEMRSHKCKPNICTYTALVNAF 269
AL + F E R P++ T A+++ +
Sbjct: 551 ALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIY 610
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
R+ + +A EI + +G+ + +YN+LM Y H G EPD
Sbjct: 611 GRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDV 670
Query: 319 ASYNIMVDAYGRAGLHE 335
SYNI++ AY R + +
Sbjct: 671 ISYNIVIYAYCRNDMMD 687
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ L+K Y G E+ VF+E++ P V +N+ + + G +
Sbjct: 386 CKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVS 445
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ MKR P +T+ +I+ YG+ A+ + M P++ TY A++
Sbjct: 446 GVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATL 505
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHMGCE 315
AR GL E++E++ +++ G +P+ Y++L+ AY R + RM+ E
Sbjct: 506 ARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAE 554
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 153 TEDTYALLLKAYCMSG----LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
T T+A+LLK + LL + E F E RK G+ P N+ + + KA
Sbjct: 560 TIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKA 619
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
EI M S +Y ++ +Y + + ++F E+ +P++ +Y ++ A
Sbjct: 620 NEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYA 679
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPD 317
+ R + +EA+ I E+++ PDV YN + AY S + GC+P+
Sbjct: 680 YCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPN 739
Query: 318 RASYNIMVDAYGRAGLHEGKCSY 340
+YN +VD Y + L + CS+
Sbjct: 740 HNTYNSIVDWYCKLKLRDEACSF 762
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ YG + ++ + E+ +C P T+ LL + +G+ + VF E
Sbjct: 391 CTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEE 450
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ P +N+ I + G+ +A+ ++RM P TY ++ +
Sbjct: 451 MKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGL 510
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY---- 295
+ K+ EM+ CKPN TY++L++A+A E + E++ I+
Sbjct: 511 WEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKT 570
Query: 296 ------AYNALMEAYR-LISRMHMGCEPDRASYNIMVDAYGR 330
+ L+E R + G PD + N M+ YGR
Sbjct: 571 LVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGR 612
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG+K + KA + +S + +Y L+ Y + K+E +FRE+ G
Sbjct: 606 MLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKG 665
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YN I + +A I + MK P TY I Y S A+
Sbjct: 666 IEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAI 725
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ M CKPN TY ++V+ + + L +EA + L ++P +
Sbjct: 726 DVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNL--GDLDPQI 773
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 132/269 (49%), Gaps = 29/269 (10%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSL 134
L P+ T++ +++V ++ + WD I+ + +C ++ I A G++ L
Sbjct: 263 LSPSLVTYNVMLDVYG--KMGRSWDKILDLLDEMRNEGLQFDEFTCSTV--ISACGREGL 318
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A+ ++EL S P TY LL+ + +G+ +A + +EM +V YN
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ ++ G ++ + M R P+ TYT +IN YG+A K AL+LFN+M+
Sbjct: 379 LVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------AYRLIS 308
C PN+CTY +++ ++ EE +I ++ G P+ +N L+ ++ ++
Sbjct: 439 CVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVN 498
Query: 309 RM-----HMGCEPDRASYNIMVDAYGRAG 332
+ + G EP + ++N ++ AYGR G
Sbjct: 499 HVFREMKNCGFEPGKDTFNTLISAYGRCG 527
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ ++ +A E+ D+ C TY L+ AY +G E+ V M + G
Sbjct: 344 LLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG 403
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+AV Y + I+ + G KA+++F +MK+ C P+ TY ++ L GK S+S +
Sbjct: 404 VMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMI 463
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ ++MR + C PN T+ L+ +G + +F +++ G EP +N L+ AY
Sbjct: 464 KILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAY 523
Query: 305 -RLISR----------MHMGCEPDRASYNIMVDAYGRAG 332
R S M G P +YN +++A R G
Sbjct: 524 GRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRG 562
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 25/199 (12%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R + E Y++ LK LL+K + KY L A + + + G ++A
Sbjct: 205 RILGRESKYSIALK------LLDKIP-----IDKYSLDVRACT--TILHAYSRNGKYKQA 251
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEMRSHKCKPNICTYTALVN 267
+ +F+RMK PS TY +M+++YGK +S+ L L +EMR+ + + T + +++
Sbjct: 252 IAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVIS 311
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEP 316
A REGL EA+E F +L+ +G EP YNAL+ EA ++ M C
Sbjct: 312 ACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTL 371
Query: 317 DRASYNIMVDAYGRAGLHE 335
D +YN +V AY RAG +E
Sbjct: 372 DSVTYNELVAAYVRAGFYE 390
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 46/257 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G K HK + E+ + P +DT+ L+ AY G A ++ EM K G
Sbjct: 484 LLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAG 543
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK----- 239
P A YN+ ++ L + G+ + A + M+ +P+ +++LM++ Y K
Sbjct: 544 FTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLE 603
Query: 240 -------------SFMALKL-----------------FNEMRSHKCKPNICTYTALVNAF 269
S++ L+ F E+ + KP++ + ++++ F
Sbjct: 604 RIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIF 663
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
A+ + E A+++ + ++ +G++PD+ YN+LM Y L + G PD
Sbjct: 664 AKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDL 723
Query: 319 ASYNIMVDAYGRAGLHE 335
SYN ++ + R GL +
Sbjct: 724 VSYNTIIKGFCRQGLMQ 740
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AYG+ KA + ++ S C+P TY +L E+ + +MR G
Sbjct: 414 VINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRING 473
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ + +N+ + G + +F+ MK +P +T+ +I+ YG+ A
Sbjct: 474 CPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAA 533
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+++EM P TY AL+NA AR G + AE + ++ G +P+ +++ ++ Y
Sbjct: 534 KMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCY 593
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 46/253 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV-------- 176
L+ A ++ K AE L++ + P E +++L+L Y G + E +
Sbjct: 554 LLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQ 613
Query: 177 ---------------------------FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
F E+ K G P V++NS + K ++A
Sbjct: 614 IFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQ 673
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++ QP TY ++N+Y + + + A ++ + P++ +Y ++ F
Sbjct: 674 KMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGF 733
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
R+GL +EA + ++ GI P ++ YN + Y +IS M C+P+
Sbjct: 734 CRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNE 793
Query: 319 ASYNIMVDAYGRA 331
+Y I+VD Y +A
Sbjct: 794 LTYKIIVDGYCKA 806
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 111/297 (37%), Gaps = 55/297 (18%)
Query: 91 PTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
P T+ +IN ++QL K V C ++ G+KS ++
Sbjct: 406 PNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKI 465
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++ + C P T+ LL G + VFREM+ G P +N+ I +
Sbjct: 466 LSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGR 525
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A +++ M + P TY ++N + A + +MR+ KPN +
Sbjct: 526 CGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETS 585
Query: 262 YTALVNAFAREGLCEEAEEI-----------------------------------FEQLQ 286
++ +++ +A+ G E I FE+L
Sbjct: 586 FSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELM 645
Query: 287 GAGIEPDVYAYNALM------EAYRLISRM-----HMGCEPDRASYNIMVDAYGRAG 332
G +PD+ +N+++ Y +M G +PD +YN +++ Y R G
Sbjct: 646 KNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRG 702
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D ++ S +SI + + +++++A+ + +S P TY L+ Y G
Sbjct: 650 KPDMVIFNSMLSI-----FAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGEC 704
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
KAE + + + K G P V YN+ I G + G Q+A+ + M P TY
Sbjct: 705 WKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTF 764
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ Y ++ + M CKPN TY +V+ + +
Sbjct: 765 VSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCK 805
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 203 GNPQKAVEIFQRMKRDCC----QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G ++A+ +F+ + + + ++ LMI + G+ SK +ALKL +++ K +
Sbjct: 172 GKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLD 231
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR--------- 309
+ T +++A++R G ++A +FE+++ G+ P + YN +++ Y + R
Sbjct: 232 VRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLL 291
Query: 310 ---MHMGCEPDRASYNIMVDAYGRAGL 333
+ G + D + + ++ A GR GL
Sbjct: 292 DEMRNEGLQFDEFTCSTVISACGREGL 318
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 16/238 (6%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+RL+KK ++ LL K KKA+ LE+ + +PT TY ++
Sbjct: 300 MRLSKKASSFTYNPLITGLL-----AKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
SG +E A+ F EMR GL P + YNS ++G K G+ ++A+ +F ++ P+
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVL 414
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY ++I+ Y + A +L EM C P++CTYT L+ A E F+++
Sbjct: 415 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM 474
Query: 286 QGAGIEPDVYAYN----------ALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G++PD +AYN A+ +A+RL M + G D +YNI++D + G
Sbjct: 475 LSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTG 532
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ A+C GLL +A F++M GL PSAV Y +I + GN A F++M
Sbjct: 555 TYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKM 614
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ +P+ TY ++I+ + ++ +A + F+EM PN TYT L++ +EG
Sbjct: 615 LEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNW 674
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A + ++ GI PD + AL + +
Sbjct: 675 EDAMRFYFEMHQNGIHPDYLTHKALFKGF 703
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RKYGLPPSAVVYNSYIDG 198
+ E+L P+ TY LL ++ G +K + +EM R G P+ V +N I G
Sbjct: 224 VHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITG 283
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCK 256
L + G+ ++A E+ + M R + S+ TY +I G +K F+ A L EM +
Sbjct: 284 LARKGDLEEAAEMVEGM-RLSKKASSFTYNPLIT--GLLAKGFVKKADDLQLEMENEGIM 340
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P + TY A+++ + G E A+ F +++ G++PDV YN+L+ EA L
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ H G P +YNI++D Y R G
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLG 427
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 89 LPPTHATWDDLINVSVQL----RLNKKWDPIVLMSCV------SILLIEAYGQKSLHKKA 138
L PT T++ LI+ +L + + +V C+ +IL+ ++ SL
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
EF + E+L P Y ++A G + KA + M G+ V YN IDG
Sbjct: 469 EF-FDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDG 527
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K GN A ++ +M + QP TYT +I+ + + A K F +M S P+
Sbjct: 528 LCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPS 587
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
TYT ++A+ R G A F ++ G+EP+ YN L+ AYR
Sbjct: 588 AVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFH 647
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAG 332
M G P++ +Y +++D + G
Sbjct: 648 EMLERGLVPNKYTYTLLIDGNCKEG 672
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 98/254 (38%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV-------- 176
L+ Y + K+A + +L + PT TY +L+ YC G LE+A +
Sbjct: 384 LLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
Query: 177 ---------------------------FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
F EM GL P YN+ I L G KA
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAF 503
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M + T TY ++I+ K A L +M + +P+ TYT L++A
Sbjct: 504 RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAH 563
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLIS-------RMHMGCEPDR 318
GL EA + F+ + G+ P Y + AY L S + G EP+
Sbjct: 564 CERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 623
Query: 319 ASYNIMVDAYGRAG 332
+YN+++ A R G
Sbjct: 624 ITYNVLIHALCRTG 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ L ++A + +++ P+ TY + + AYC G L A FR+M + G
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YN I L + G Q A F M P+ TYTL+I+ K A+
Sbjct: 619 VEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAM 678
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
+ + EM + P+ T+ AL F EG A E E
Sbjct: 679 RFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLEN 717
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 78/203 (38%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
AV EM + G+ PS V YN+ +D LK G K + + M
Sbjct: 223 AVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEM------------------- 263
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE----------- 283
E R C PN T+ ++ AR+G EEA E+ E
Sbjct: 264 --------------ETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF 309
Query: 284 -----------------------QLQGAGIEPDVYAYNALMEA-----------YRLISR 309
+++ GI P V YNA++ + +
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
MG +PD +YN +++ Y +AG
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAG 392
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 87 DSLPPTHATWDDLINVSVQ---LRLNKKW------DPIVLMSCVSILLIEAYGQKSLHKK 137
+ L P T+ LI+ + LR +K+ D + + + I AY ++
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + ++L+ P E TY +L+ A C +G + A F EM + GL P+ Y ID
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G K GN + A+ + M ++ P T+
Sbjct: 667 GNCKEGNWEDAMRFYFEMHQNGIHPDYLTH 696
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
S + L F+EM SH P++ ++ + ++ + ++ GIEP + YN
Sbjct: 183 STLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNT 242
Query: 300 LMEAY----------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
L++++ L+ M GC P+ ++N+++ R G
Sbjct: 243 LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKG 288
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSL 134
L PT T++ +++V ++ + W+ I+ + +C ++ I A G++ L
Sbjct: 240 LSPTLVTYNVMLDVYG--KMGRSWNKILGLLDEMRSNGLEFDEFTCSTV--ISACGREGL 295
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A + L + TY LL+ + +G+ +A ++ +EM K PP V YN
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ ++ G ++ + M R P+ TYT +IN YGKA K AL F +M+
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------AYRLIS 308
C PN+CTY A++ ++ EE ++ ++ G P+ +N ++ ++ ++
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 309 RMHM-----GCEPDRASYNIMVDAYGRAG 332
R+ G EP+R ++N ++ AYGR G
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCG 504
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ ++ +A E+ + C P TY L+ AY +G E+ M + G
Sbjct: 321 LLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ Y + I+ K G KA+ F++MK C P+ TY ++ + GK S+ +
Sbjct: 381 IMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMI 440
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +MRS+ C PN T+ ++ +G+ + +F +++ G EP+ +NAL+ AY
Sbjct: 441 DMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY 500
Query: 305 -RLISRMHM----------GCEPDRASYNIMVDAYGRAG 332
R S++ + G P +YN +++A R G
Sbjct: 501 GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRG 539
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 47/264 (17%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G K +HK + E+ P DT+ L+ AY G ++ EM K G P
Sbjct: 466 GNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCV 525
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS----------- 238
YN+ ++ L + G+ + A + MK +P+ +Y+LM+N Y K
Sbjct: 526 TTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Query: 239 -----------------------KSFMAL-KLFNEMRSHKCKPNICTYTALVNAFAREGL 274
++ M + + F E H KP++ + ++++ FA+ +
Sbjct: 586 IYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKM 645
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNI 323
+ A E+ ++ +G++PD+ YN+LM+ Y L G +PD SYN
Sbjct: 646 YDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNT 705
Query: 324 MVDAYGRAGLHEGKCSYSLVELSV 347
++ + R GL + + +L E+++
Sbjct: 706 VIKGFCRQGLMQ-EAIRTLSEMTI 728
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 9/227 (3%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKW-DPIVLMSCVSIL--------LIEAYGQKSLHKK 137
++ PP T+++L+ V+ +++ D I M I+ +I AYG+ K
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + ++ +S C+P TY +L LE+ + +MR G P++V +N+ +
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + +F+ MK +P+ +T+ +I YG+ +K++ EM P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ TY AL+NA AR G E AE + ++ G +P+ +Y+ ++ Y
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCY 570
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTED------TYALLLKAYCMSGLLEKAEAVF 177
L++ G++S H A L LLD I E+ + +L AY G E+A +F
Sbjct: 179 LMVRILGRESQHSVA----LRLLDE--ISVEEYSLDVRAWTTILHAYSRIGKYERAITMF 232
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+MRK GL P+ V YN +D K G K + + M+ + + T + +I+ G+
Sbjct: 233 EKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGR 292
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A K F ++S TY +L+ F + G+ EA I ++++ PD+
Sbjct: 293 EGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVT 352
Query: 297 YNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
YN L+ AY + + + G P+ +Y +++AYG+AG + S+
Sbjct: 353 YNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSF 407
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 55/293 (18%)
Query: 91 PTHATWDDLINV----SVQLRLNKKWDPIV---LMSCVSIL--LIEAYGQKSLHKKAEFT 141
P T++ LI Q+ + K ++ ++ CV+ L+ A ++ + AE
Sbjct: 488 PNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESV 547
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSG--------------------------------- 168
L++ P E +Y+L+L Y G
Sbjct: 548 ILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFK 607
Query: 169 --LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
L E F+E K+G P V++NS + K +A E+ + ++ QP T
Sbjct: 608 RRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVT 667
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y ++++Y + + + ++ ++ KP++ +Y ++ F R+GL +EA ++
Sbjct: 668 YNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMT 727
Query: 287 GAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAY 328
+GI P + YN + Y +IS M C P+ +Y I+VD Y
Sbjct: 728 ISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGY 780
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D ++ S +SI + + ++ +A + +S P TY L+ Y G
Sbjct: 627 KPDLVLFNSMLSI-----FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGEC 681
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
K E + + ++K G P V YN+ I G + G Q+A+ M +P TY
Sbjct: 682 WKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTF 741
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+ Y ++ + M H C+PN TY +V+ + + +EA + +
Sbjct: 742 VAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 198 GLLKGGNPQKAVEIFQ----RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
GL GN ++AV +F+ + + + LM+ + G+ S+ +AL+L +E+
Sbjct: 144 GLDLSGNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVE 203
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR---- 309
+ ++ +T +++A++R G E A +FE+++ G+ P + YN +++ Y + R
Sbjct: 204 EYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNK 263
Query: 310 --------MHMGCEPDRASYNIMVDAYGRAGL 333
G E D + + ++ A GR GL
Sbjct: 264 ILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSL 134
L PT T++ +++V ++ + W+ I+ + +C ++ I A G++ L
Sbjct: 240 LSPTLVTYNVMLDVYG--KMGRSWNKILGLLDEMRSNGLEFDEFTCSTV--ISACGREGL 295
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A + L + TY LL+ + +G+ +A ++ +EM K PP V YN
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ ++ G ++ + M R P+ TYT +IN YGKA K AL F +M+
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------AYRLIS 308
C PN+CTY A++ ++ EE ++ ++ G P+ +N ++ ++ ++
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 309 RMHM-----GCEPDRASYNIMVDAYGRAG 332
R+ G EP+R ++N ++ AYGR G
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCG 504
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ ++ +A E+ + C P TY L+ AY +G E+ M + G
Sbjct: 321 LLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ Y + I+ K G KA+ F++MK C P+ TY ++ + GK S+ +
Sbjct: 381 IMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMI 440
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +MRS+ C PN T+ ++ +G+ + +F +++ G EP+ +NAL+ AY
Sbjct: 441 DMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY 500
Query: 305 -RLISRMHM----------GCEPDRASYNIMVDAYGRAG 332
R S++ + G P +YN +++A R G
Sbjct: 501 GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRG 539
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 47/264 (17%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G K +HK + E+ P DT+ L+ AY G ++ EM K G P
Sbjct: 466 GNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCV 525
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS----------- 238
YN+ ++ L + G+ + A + MK +P+ +Y+LM+N Y K
Sbjct: 526 TTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Query: 239 -----------------------KSFMAL-KLFNEMRSHKCKPNICTYTALVNAFAREGL 274
++ M + + F E H KP++ + ++++ FA+ +
Sbjct: 586 IYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKM 645
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNI 323
+ A E+ ++ +G++PD+ YN+LM+ Y L G +PD SYN
Sbjct: 646 YDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNT 705
Query: 324 MVDAYGRAGLHEGKCSYSLVELSV 347
++ + R GL + + +L E+++
Sbjct: 706 VIKGFCRQGLMQ-EAIRTLSEMTI 728
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 9/227 (3%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKW-DPIVLMSCVSIL--------LIEAYGQKSLHKK 137
++ PP T+++L+ V+ +++ D I M I+ +I AYG+ K
Sbjct: 344 NNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDK 403
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + ++ +S C+P TY +L LE+ + +MR G P++V +N+ +
Sbjct: 404 ALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLA 463
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + +F+ MK +P+ +T+ +I YG+ +K++ EM P
Sbjct: 464 MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ TY AL+NA AR G E AE + ++ G +P+ +Y+ ++ Y
Sbjct: 524 CVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCY 570
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTED------TYALLLKAYCMSGLLEKAEAVF 177
L++ G++S H A L LLD I E+ + +L AY G E+A +F
Sbjct: 179 LMVRILGRESQHSVA----LRLLDE--ISVEEYSLDVRAWTTILHAYSRIGKYERAITMF 232
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+MRK GL P+ V YN +D K G K + + M+ + + T + +I+ G+
Sbjct: 233 EKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGR 292
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A K F ++S TY +L+ F + G+ EA I ++++ PD+
Sbjct: 293 EGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVT 352
Query: 297 YNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
YN L+ AY + + + G P+ +Y +++AYG+AG + S+
Sbjct: 353 YNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSF 407
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 55/293 (18%)
Query: 91 PTHATWDDLINV----SVQLRLNKKWDPIV---LMSCVSIL--LIEAYGQKSLHKKAEFT 141
P T++ LI Q+ + K ++ ++ CV+ L+ A ++ + AE
Sbjct: 488 PNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESV 547
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSG--------------------------------- 168
L++ P E +Y+L+L Y G
Sbjct: 548 ILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFK 607
Query: 169 --LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
L E F+E K+G P V++NS + K +A E+ + ++ QP T
Sbjct: 608 RRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVT 667
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y ++++Y + + + ++ ++ KP++ +Y ++ F R+GL +EA ++
Sbjct: 668 YNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMT 727
Query: 287 GAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAY 328
+GI P + YN + Y +IS M C P+ +Y I+VD Y
Sbjct: 728 ISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGY 780
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D ++ S +SI + + ++ +A + +S P TY L+ Y G
Sbjct: 627 KPDLVLFNSMLSI-----FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGEC 681
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
K E + + ++K G P V YN+ I G + G Q+A+ M +P TY
Sbjct: 682 WKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTF 741
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+ Y ++ + M H C+PN TY +V+ + + +EA + +
Sbjct: 742 VAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 198 GLLKGGNPQKAVEIFQ----RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
GL GN ++AV +F+ + + + LM+ + G+ S+ +AL+L +E+
Sbjct: 144 GLDLSGNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVE 203
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR---- 309
+ ++ +T +++A++R G E A +FE+++ G+ P + YN +++ Y + R
Sbjct: 204 EYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNK 263
Query: 310 --------MHMGCEPDRASYNIMVDAYGRAGL 333
G E D + + ++ A GR GL
Sbjct: 264 ILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 20/276 (7%)
Query: 81 TIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEF 140
++ D SL H DD + ++R + P +C ILL A ++ + F
Sbjct: 135 SVVDTLLSLLADHGLLDDAVRALARVR--QLRVPPNTRTCNHILLRLARNRQGGLVRRLF 192
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
L +P T+ +++ C G L +A A+F M+ G P V YNS IDG
Sbjct: 193 DLLP------VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 246
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G+ ++ ++ M++ C TY +IN + K + A F EM+ N+
Sbjct: 247 KCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVV 306
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
T++ V+AF +EGL +EA ++F Q++ G+ P+ + Y +L+ +A L+ M
Sbjct: 307 TFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366
Query: 311 -HMGCEPDRASYNIMVDAYGRAG-LHEGKCSYSLVE 344
H G P+ +Y +MVD + G + E SL+E
Sbjct: 367 VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLME 402
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ ++ E E+ S C TY L+ + G +EKA + F EM++ G
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG 300
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V +++++D K G Q+A+++F +M+ P+ TYT +++ KA + A+
Sbjct: 301 VVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 360
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +EM PN+ TYT +V+ +EG EA+ + ++ G++ + Y L+ +
Sbjct: 361 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGH 420
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
++A+ ++ L ++A + ++ +P E TY L+ C +G L+ A + EM GL
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P+ V Y +DGL K G +A + M+R + + YT +I+ + + S AL
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
L N+M++ + ++ Y L+ ++ +EA+ + ++ G G+ P+ Y +M+A
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491
Query: 305 ------RLISRMH----MGCEPDRASYNIMVDAYGRAG 332
++ +H G +P+ +Y ++D +AG
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAG 529
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + +KA + E+ + T++ + A+C GL+++A +F +MR G
Sbjct: 276 LINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG 335
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y S +DG K G A+ + M P+ TYT+M++ K K A
Sbjct: 336 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEAD 395
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ + M K N YT L++ E A ++ Q++ G+E DV Y L+
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA L+ +M G P+ Y ++DA +AG
Sbjct: 456 CKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ C +++A+++ +M GL P+ V+Y + +D L K G +AV + ++
Sbjct: 448 YGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKIL 507
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP+ TY +I+ KA A+ FN+MR PN+ YTAL++ F + G
Sbjct: 508 DSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLN 567
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A + ++ G+ D Y +L++ Y
Sbjct: 568 KAMHLMNEMIDKGMSLDKVVYTSLIDGY 595
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++LDS P TY L+ C +G + +A + F +MR+ GL P+ Y + IDG K G
Sbjct: 505 KILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIG 564
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ KA+ + M YT +I+ Y K + A L +M + ++ YT
Sbjct: 565 SLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYT 624
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
++ F + +EA + ++ G GI PD YN L+ Y+ + M
Sbjct: 625 CFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ A +G +A A+ ++ G P+ V Y + IDGL K G+ +A+
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M+ P+ + YT +I+ + K A+ L NEM + YT+L++ + +
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRM-HMGCEPDRAS 320
+ ++A + ++ +G++ D+Y Y N + EA ++S M G PD+
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657
Query: 321 YNIMVDAYGRAG 332
YN ++ Y + G
Sbjct: 658 YNCLIRKYQKLG 669
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 66/256 (25%)
Query: 139 EFTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAEAVFR 178
EFTY L+D C +P TY +++ C G + +A+ V
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ----------------- 221
M + G+ + ++Y + I G N ++A+++ +MK +
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459
Query: 222 ------------------PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
P+T YT +++ KA K A+ L +++ +PN+ TY
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYC 519
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------- 312
AL++ + G EA F +++ G++P+V AY AL++ + L MH+
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579
Query: 313 GCEPDRASYNIMVDAY 328
G D+ Y ++D Y
Sbjct: 580 GMSLDKVVYTSLIDGY 595
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ LP V ++ + L G AV R+++ P+T T ++ + +
Sbjct: 129 RRSALPS---VVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG 185
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ +LF+ + PN+ T+ +++ +EG EA +F +++ G PDV YN+L
Sbjct: 186 GLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSL 241
Query: 301 MEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
++ Y +L+S M GC D +YN +++ + + G E SY
Sbjct: 242 IDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++A+G+ K Y E+ C P T+ +++ A S L KA ++ E+
Sbjct: 836 LLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG 895
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ Y IDGLLK G ++A++IF+ M C P++ Y ++IN +GK+ + A
Sbjct: 896 DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF +M +P++ +YT LV G +EA + FE+L+ G++PD +YN ++
Sbjct: 956 CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIING 1015
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L S M + G PD +YN ++ G AG
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAG 1055
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++A + E+LD C P Y +L+ + SG ++ A +F++M K G
Sbjct: 907 LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y ++ L G +AV+ F+ +K P T +Y +IN GK+ + AL
Sbjct: 967 IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEAL 1026
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF+EM++ P++ TY AL+ G + A +++E+LQ G+EP V+ YNAL+ +
Sbjct: 1027 SLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGH 1086
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAGL 333
L M +GC P+ ++ + + Y RAGL
Sbjct: 1087 SLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGL 1126
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LLL A+ S + K ++ EMR G P+A+ +N I L+K N KA+++
Sbjct: 829 PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ + P+ TY +I+ KA +S A+K+F EM + C PN Y L+N F +
Sbjct: 889 YYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGK 948
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
G + A E+F+++ GI PD+ +Y L+E + R+ G +PD S
Sbjct: 949 SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVS 1008
Query: 321 YNIMVDAYGRA 331
YN +++ G++
Sbjct: 1009 YNFIINGLGKS 1019
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L++A C SG +++A + M G+ P+ YN+ I GLLK +A+E+
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL 432
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +P+ +Y L I+ YGK+ A+ F M+ P+I A + A
Sbjct: 433 LENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAE 492
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G EAE+IF L G+ PD YN LM+ Y +L+S M GCEPD
Sbjct: 493 TGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMI 552
Query: 321 YNIMVDAYGRAG 332
N +++ +AG
Sbjct: 553 INSLINTLYKAG 564
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L I+ YG+ KA T+ + +P+ L +G + +AE +F ++ K
Sbjct: 449 VLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHK 508
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +V YN + K G KA ++ M C+P +IN KA +
Sbjct: 509 CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDA 568
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A K+F +++ K P + TY L+ +EG +A E+F + +G P+ +N+L++
Sbjct: 569 AWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD 628
Query: 303 ----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
A ++ RM M C PD +YN ++ YG + EG+ Y+
Sbjct: 629 CLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII--YGL--IREGRIDYAF 675
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + ++A + ++ A +F+EM G P + Y ID L G KA E+
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ +M+ P TY +++ +GK + +NEM P++ TYT L+ A +
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G + A ++ + + GI P+++ YN ++ EA L+ M +G +P S
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447
Query: 321 YNIMVDAYGRAG 332
Y + +D YG++G
Sbjct: 448 YVLFIDYYGKSG 459
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 22/235 (9%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL-LLKAYCMSGLLEKAEA 175
LM C+ L EA ++++ ++ E+L + +D L L+K C A+
Sbjct: 731 LMECI---LTEAEIEEAI------SFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQN 781
Query: 176 VFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
VF + K G+ P+ YN +DGLL +KA+E+F+ MK P+ TY L+++ +
Sbjct: 782 VFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH 841
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GK+ + L++EMRS C+PN T+ +++A + +A +++ +L P
Sbjct: 842 GKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
Y L+ +A ++ M GC P+ YNI+++ +G++G + C
Sbjct: 902 CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT ++Y L+ S EKA +F +M+ G P+ YN +D K K ++
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ C+P+ T+ ++I+ K++ AL L+ E+ S P CTY L++ +
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
G E+A +IFE++ G P+ YN L+ + + CE PD S
Sbjct: 914 AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973
Query: 321 YNIMVD 326
Y I+V+
Sbjct: 974 YTILVE 979
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY + KA + G + +A R+M + G +A YN I LL G +A+++++RM
Sbjct: 168 TYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGF-CNEALKVYKRM 226
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ +PS +TY+ ++ G+ + + L EM+S +PNI TYT + A R
Sbjct: 227 ISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRI 286
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
++A IF+++ G PDV Y L++A ++ E PDR +Y +
Sbjct: 287 DDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITL 346
Query: 325 VDAYGRAG 332
+D +G+ G
Sbjct: 347 MDKFGKVG 354
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A KA+ Y+++ S P TY L+ + G LE + + EM
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD 369
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y I+ L K G+ +A ++ M P+ TY MI KA + A
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA---- 299
L+L M S KP +Y ++ + + G +A + FE ++ GI P + A NA
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489
Query: 300 ------LMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ EA + + +H G PD +YN+++ Y +AG
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAG 529
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 19/194 (9%)
Query: 158 ALLLKAYCMSGLLE--------KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
+L AY +GL+ +A V++ M G+ PS Y++ + L + G+ +K +
Sbjct: 196 GFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIM 255
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + MK +P+ TYT+ I G+A + A +F EM C P++ TYT L++A
Sbjct: 256 NLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDAL 315
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDR 318
G ++A+E++ +++ + PD Y LM+ + R + M + G PD
Sbjct: 316 CAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDV 375
Query: 319 ASYNIMVDAYGRAG 332
+Y I+++A ++G
Sbjct: 376 VTYTILIEALCKSG 389
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT +Y L + Y SG KA F M+K G+ PS N+ + L + G +A +I
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI 502
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F + + P + TY +++ Y KA + A +L +EM S C+P++ +L+N +
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYK 562
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRAS 320
G + A ++F +L+ + P V YN L ++A L M GC P+ +
Sbjct: 563 AGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTIT 622
Query: 321 YNIMVDAYGR 330
+N ++D +
Sbjct: 623 FNSLLDCLSK 632
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + +LI +G+ A + +++ P +Y +L++ C++G +++A F
Sbjct: 936 SVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
E++ GL P V YN I+GL K +A+ +F MK P TY +I G A
Sbjct: 996 ELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAG 1055
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K +A+K++ E++ +P++ TY AL+ + G ++A +F+++ G P+ +
Sbjct: 1056 KVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFA 1115
Query: 299 ALMEAYRLISRMH 311
L Y +H
Sbjct: 1116 QLPNKYPRAGLVH 1128
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y + KA E++ C P L+ +G ++ A +F ++
Sbjct: 520 MLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNL 579
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ V YN + GL K G KA+E+F M C P+T T+ +++ K +A
Sbjct: 580 KLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLA 639
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LK+F M C P++ TY ++ REG + A F Q++ + PD
Sbjct: 640 LKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPD 688
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY+ L+ A G K + EM+ GL P+ Y I L + A I
Sbjct: 233 PSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGI 292
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M + C P TYT++I+ A K A +L+ +MR+ P+ TY L++ F +
Sbjct: 293 FKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGK 352
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
G E + + +++ G PDV Y L+E A+ ++ M G P+ +
Sbjct: 353 VGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHT 412
Query: 321 YNIMV 325
YN M+
Sbjct: 413 YNTMI 417
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +LL G + KA +F M + G PP+ + +NS +D L K A+++
Sbjct: 583 PTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKM 642
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RM C P TY +I + + A F++M+ P+ T L+ R
Sbjct: 643 FCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVR 701
Query: 272 EGLCEEA-EEIFEQLQGAGIEPDVYAYNALME 302
G E+A + + E + A ++ + + LME
Sbjct: 702 HGRVEDAIKVVMEFVHQACLQTNSQFWGELME 733
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 49/256 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ G++ KA + + +S C P T+ LL + ++ A +F M
Sbjct: 590 ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P + YN+ I GL++ G A F +MK+ P T +I + + A
Sbjct: 650 NCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKK-FLSPDYVTLCTLIPGVVRHGRVEDA 708
Query: 244 LKLFNEMRSHKC-KPNICTYTALVNAFAREGLCEE------------------------- 277
+K+ E C + N + L+ E EE
Sbjct: 709 IKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIK 768
Query: 278 ----------AEEIFEQL-QGAGIEPDVYAYNALME----------AYRLISRMH-MGCE 315
A+ +F++ + GI P + +YN LM+ A L M G
Sbjct: 769 VLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTH 828
Query: 316 PDRASYNIMVDAYGRA 331
P+ +YN+++DA+G++
Sbjct: 829 PNNFTYNLLLDAHGKS 844
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI AY ++ A + ++ + C PT TY ++L Y G+ K + M+
Sbjct: 223 LITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSS 282
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I +G ++A ++F+ MK P T+ ++++YGK+ + A
Sbjct: 283 GVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEA 342
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ EM P+I TY +L++A+AR+GL EA E+ +Q+ GI+PDV+ Y L+
Sbjct: 343 MEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSG 402
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ R+ M GC+P+ ++N ++ +G G
Sbjct: 403 FEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRG 442
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ K+A E+ S P+ TY L+ AY GLL +A + +M + G
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG 388
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + + G K G + A+ IF M+ C+P+ T+ +I ++G + +
Sbjct: 389 IKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMM 448
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F E+ C P+I T+ L+ F + G+ E +F++++ AG P+ +N L+ AY
Sbjct: 449 KVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 508
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ RM G PD +SYN ++ A R GL E
Sbjct: 509 SRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWE 550
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + SL+++A + E+ S P + T+ LL Y S ++A V +EM G
Sbjct: 294 LISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSG 353
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YNS I + G ++A+E+ +M +P TYT +++ + KA A+
Sbjct: 354 FSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAM 413
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F EMR+ CKPNICT+ AL+ G E ++FE+++ PD+ +N L+
Sbjct: 414 RIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVF 473
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
E + M G P+R ++N ++ AY R G
Sbjct: 474 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 512
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
A+++ G + A ++ +RK G Y S I G + AV +F++M+
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALK-LFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ C+P+ TY +++N+YGK + + L + M+S P+ TY L++ R L E
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMV 325
EA ++FE+++ +G PD +N L++ Y ++ M G P +YN ++
Sbjct: 306 EAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLI 365
Query: 326 DAYGRAGL 333
AY R GL
Sbjct: 366 SAYARDGL 373
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 10/221 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + E+ C P T+ LL + +G+ + VF+E
Sbjct: 429 CTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKE 488
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P +N+ I + G+ Q+A+ +++RM P +Y ++ +
Sbjct: 489 MKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGL 548
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP------D 293
+ K+F EM+ +CKPN TY +L++A+A E + E++ EP
Sbjct: 549 WEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKT 608
Query: 294 VYAYNA----LMEAYRLISRMHMGCEPDRASYNIMVDAYGR 330
+ N+ LME + PD ++ N M+ YGR
Sbjct: 609 LVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGR 649
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 26/242 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A + L +++E + E+ D RC P E TY LL AY S +E+ + E+
Sbjct: 539 VLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGL 598
Query: 185 LPP------SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
P + V+ NS D L++ + F+ +K+ P T MI +YG+
Sbjct: 599 TEPVPVLLKTLVLVNSKCDLLMETEHA------FEELKKKG-SPDLSTLNAMIAIYGRRQ 651
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A ++ N M P++ TY +L+ +R E +EE+ +++ G++PD+ +YN
Sbjct: 652 MVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYN 711
Query: 299 ALMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSV 347
++ AY R+ S M G PD +YN V +Y L E + +V +
Sbjct: 712 TVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFED--AIGVVRYMI 769
Query: 348 KH 349
KH
Sbjct: 770 KH 771
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG++ + KA + +S P+ TY L+ + S E++E V +E+ G
Sbjct: 643 MIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKG 702
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + YN+ I + G + A IF MK P TY + Y S A+
Sbjct: 703 LKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAI 762
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M H CK N TY ++V+ + +
Sbjct: 763 GVVRYMIKHGCKRNQNTYNSIVDGYCK 789
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
E L + P T ++ Y ++ KA + M + G PS YNS + +
Sbjct: 626 FEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRS 685
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
N +++ E+ + + +P +Y +I Y + + A ++F+ M+++ P++ TY
Sbjct: 686 ENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITY 745
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
V ++A + L E+A + + G + + YN++++ Y
Sbjct: 746 NTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+++E E+L P +Y ++ AYC +G ++ A +F M+ YGL P + YN++
Sbjct: 689 ERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTF 748
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---SFMALKLFNEMRS 252
+ + A+ + + M + C+ + TY +++ Y K S+ + M + N++
Sbjct: 749 VASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQLDP 808
Query: 253 HKCK 256
H K
Sbjct: 809 HVTK 812
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 191 VYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYTLM-------INLYGKASKSFM 242
V +S ID +G K + ++F+ ++ S+ T+ + I G K M
Sbjct: 103 VLDSLIDPCFEGSELDKVLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDM 162
Query: 243 ALKLFNEMRSHKCKPNI--CTYTA-LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A+ +F+ +R + ++ C+ A ++ +EG A I L+ G + DVYAY +
Sbjct: 163 AMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTS 222
Query: 300 LMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
L+ AY R GC+P +YN++++ YG+ G+ K S
Sbjct: 223 LITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKIS 273
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLL+K VF EM G+ S Y + I+ + G + ++
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ RMK D PS TY +IN + + L LF EMR +P+I TY L++A
Sbjct: 197 ELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
A GL +EAE +F + GI PD+ Y+ L+E + + R+ G PD
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPD 316
Query: 318 RASYNIMVDAYGRAG 332
SYN++++AY ++G
Sbjct: 317 ITSYNVLLEAYAKSG 331
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+ + ++R IV + L+ A + L +AE + + D +P
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNT----LLSACAIRGLGDEAEMVFRTMNDGGIVPDLT 283
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L++ + LEK + EM G P YN ++ K G+ ++A+ +F +M
Sbjct: 284 TYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY++++NL+G++ + +LF EM+S P+ TY L+ F G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIM 324
+E +F + IEPD+ Y ++ +A +++ M P +Y +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 325 VDAYGRAGLHE 335
++A+G+A L+E
Sbjct: 464 IEAFGQAALYE 474
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EAY + K+A + ++ + C P +TY++LL + SG + +F EM+
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P A YN I+ +GG ++ V +F M + +P ETY +I GK A
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
K+ M ++ P+ YT ++ AF + L EEA F + G P + Y++L+
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYS 501
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E+ ++SR+ G +R ++N ++AY + G E
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFE 544
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ +GQ + +LE+ S P TY +L++ + G ++ +F +M +
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y I KGG + A +I Q M + PS++ YT +I +G+A+ A
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L FN M P+I TY +L+ +FAR GL +E+E I +L +GI + +NA +EA
Sbjct: 477 LVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Query: 304 YRLISRMHMG-----------CEPDRASYNIMVDAYGRAGL 333
Y+ + C+PD + ++ Y A L
Sbjct: 537 YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I G++ L K + E+ + +Y L+ AY +G E + + M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 181 RKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ + PS + YN+ I+ +GG + + + +F M+ + QP TY +++
Sbjct: 203 KNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +F M P++ TY+ LV F + E+ ++ ++ G PD+ +YN
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNV 322
Query: 300 LMEAYR----------LISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
L+EAY + +M GC P+ +Y+++++ +G++G ++
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 203 GNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ Q+++ +F+ M+R C+P+ YT+MI+L G+ L++F+EM S ++ +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRM 310
YTAL+NA+ R G E + E+ ++++ I P + YN ++ A L + M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 311 -HMGCEPDRASYNIMVDAYGRAGLHE 335
H G +PD +YN ++ A GL +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGD 264
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEA+GQ +L+++A + + + P+ +TY LL ++ GL++++EA+ + G
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+P + +N+ I+ +GG ++AV+ + M++ C P T ++++Y A
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECR 582
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F EM++ P+I Y ++ + + ++ E+ E++ N + +
Sbjct: 583 EQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS----------NRVSNIH 632
Query: 305 RLISRMHMGCEPDRASYNIM 324
++I +M G D +++ I+
Sbjct: 633 QVIGQMIKGDYDDDSNWQIV 652
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A G+ LH+ A + + +P+ Y +++A+ + L E+A F M + G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS Y+S + +GG +++ I R+ + +T+ I Y + K A+
Sbjct: 488 SNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K + +M +C P+ T A+++ ++ L +E E FE+++ + I P + Y ++ Y
Sbjct: 548 KTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVY 607
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 16/233 (6%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
L SC +L G ++ + ++ Y E++ R P T+ + + C +G L KAE V
Sbjct: 165 LNSCNPLLSALVKGNET--GEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDV 222
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQK---AVEIFQRMKRDCCQPSTETYTLMINL 233
+++ +G P+ V YN+ IDG K G+ K A I + M + P+ T+ +I+
Sbjct: 223 IEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDG 282
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ K A F EM+ KPNI TY +L+N + G +EA +++++ G G++P+
Sbjct: 283 FCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPN 342
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ +NAL+ EA +L + P+ ++N M+DA+ +AG+ E
Sbjct: 343 IVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ E+L ++ P E T+ L+ +C + A+ F EM++ GL P+ V YNS I
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL G +A+ ++ +M +P+ T+ +IN + K A KLF+++
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN T+ +++AF + G+ EE + + GI P+V YN L+ A +L
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ M + + D +YNI++ + + G
Sbjct: 436 LNEMENYELKADVVTYNILIGGWCKDG 462
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 89 LPPTHATWDDLIN-VSVQLRLNKK---WDPIVLMSCVSIL-----LIEAYGQKSLHKKAE 139
L P T++ LIN +S +L++ WD +V + + LI + +K + K+A
Sbjct: 304 LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEAR 363
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ ++ + +P T+ ++ A+C +G++E+ A+ M G+ P+ YN I GL
Sbjct: 364 KLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGL 423
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N + A ++ M+ + TY ++I + K + A KL EM + KPN
Sbjct: 424 CRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNH 483
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISR 309
TY L++ + EG + A ++ Q++ G +V YN L++ + RL++
Sbjct: 484 VTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNE 543
Query: 310 M-HMGCEPDRASYNIM 324
M G P+R +Y+++
Sbjct: 544 MLEKGLNPNRTTYDVV 559
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C G KAE + EM G+ P+ V YN+ +DG GN + A+++ +M
Sbjct: 450 TYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQM 509
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ + + TY ++I + K K A +L NEM PN TY + +G
Sbjct: 510 EKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFI 569
Query: 276 EEAE 279
+ E
Sbjct: 570 PDIE 573
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 49/219 (22%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L+ AY + + A VFR ++ YG S N + L+KG + +++ M +
Sbjct: 135 MLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR 194
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR------- 271
QP+ T+ + IN KA K A + ++++ PNI TY L++ +
Sbjct: 195 RIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKM 254
Query: 272 --------------------------EGLCEE-----AEEIFEQLQGAGIEPDVYAYNAL 300
+G C++ A+ FE++Q G++P++ YN+L
Sbjct: 255 YRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSL 314
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+ EA L +M +G +P+ ++N +++ +
Sbjct: 315 INGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGF 353
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
+L K +F Y +L+ S PT TY L+ G LE+A +F EM YG P+ ++
Sbjct: 873 NLDKALDFFY-DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N I+G K G+ + A ++F+RM + +P ++YT++++ A + AL FNE++S
Sbjct: 932 NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
P+ Y ++N + EEA ++ +++ GI PD+Y YN+LM +
Sbjct: 992 TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051
Query: 303 AYRLISRMHM-GCEPDRASYNIMVDAY 328
A R+ + + G EPD +YN ++ Y
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGY 1078
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 23/285 (8%)
Query: 74 QREVDSNTIWDAFD---SLPPTHATWDDLINVSVQLRLNKK-WDPIVLMSCVSI------ 123
+RE+ + I+D F + PT A+++ LI +++ +K WD M V
Sbjct: 766 KRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825
Query: 124 --LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L+ +G+ + Y E++ RC P TY +++ + S L+KA F ++
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P+ Y IDGL K G ++A+ +F+ M C+P+ + ++IN YGK +
Sbjct: 886 SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +LF M + +P++ +YT LV+ G +EA F +L+ G++PD AYN ++
Sbjct: 946 TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005
Query: 302 ----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA L + M + G PD +YN ++ G AG+ E
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T+ +L+ C + ++A A F MRK G+ P+ YN+ I GLL+ G + A++
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M+ QP+ TY + I+ +GK+ ++ A++ F +M++ PNI A + + A
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
G EA+ +F L+ G+ PD YN +M EA L+S M GCEPD
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543
Query: 320 SYNIMVDAYGRAG 332
N ++D+ +AG
Sbjct: 544 VVNSLIDSLYKAG 556
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 134 LHKKAE--FTYLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+H K E E + + I + DTY + KA + G L + V +MRK G +A
Sbjct: 134 VHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAY 193
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YN I L++ G +A+E+++RM + +PS +TY+ ++ GK S M + L EM
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
+PN+ T+T + R G +EA EIF ++ G PD+ Y L++A
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313
Query: 305 ----RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L +M G +PD+ Y ++D + G
Sbjct: 314 ENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ + L ++ P TY +++K Y G +++A + EM + G P +V NS
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID L K G +A ++F RMK P+ TY +++ GK + A++LF M KC
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKC 608
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
PN ++ L++ F + E A ++F ++ +PDV YN ++
Sbjct: 609 SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ I+ +G+ KA T+ ++ +P L + G L +A+ +F +R+
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P +V YN + K G +AV + M R+ C+P +I+ KA + A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
++F+ M+ K P + TY L++ +EG ++A E+FE + P+ ++N L++
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDC 621
Query: 303 ---------AYRLISRMH-MGCEPDRASYNIMV 325
A ++ S+M M C+PD +YN ++
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P TY +L+ A C +G LE A+ +F +M+ G P V+Y + +D G+
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
E + +M+ D P T+T+++++ KA A F+ MR PN+ TY L+
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
R G E+A ++ ++ G++P Y YN ++ +
Sbjct: 410 CGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYF 447
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY + + + SG KA F +M+ G+ P+ V N+ + L + G ++A +
Sbjct: 435 PTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F ++ + P + TY +M+ Y K + A+ L +EM + C+P++ +L+++ +
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G +EA ++F++++ + P V YN L+ +A L M C P+ S
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTIS 614
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+N ++D + C VEL++K +
Sbjct: 615 FNTLLDCF---------CKNDEVELALKMF 635
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + C P L+ + +G +++A +F M+ L P+ V YN+ + GL K G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
QKA+E+F+ M C P+T ++ +++ + K + +ALK+F++M CKP++ TY
Sbjct: 592 RVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYN 651
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
++ +E A F QL+ + + PD
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQLKKS-MHPD 680
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q +A Y ++ P+ TY+ L+ A E + +EM G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + I L + G +A EIF+RM + C P TYT++I+ A + A
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF +M+++ KP+ Y L++ F G + +E + Q++ G PDV + L+
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA+ M G P+ +YN ++ RAG
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG 416
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ + A + +++ P +Y +L+ C++G +++A F E++
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFM 242
GL P + YN I+GL K ++A+ ++ M+ P TY +LM+NL G A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNL-GLAGMVEQ 1051
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +++ E++ +P++ TY AL+ ++ E A +++ + G P++ Y L
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 47/255 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G++ +KA + +++ +C P ++ LL +C + +E A +F +M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY-----GKA-- 237
P + YN+ I GL+K A F ++K+ TL+ L G A
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAIS 702
Query: 238 -SKSFMALKLFNEMRS-------------HKCKPNICTYTALVNAFAREG---------L 274
++ FM F RS K I ++N RE L
Sbjct: 703 IARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVL 762
Query: 275 CEEAEE-----IFEQL-QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
C+ E IF++ + GI P + +YN L+ +A+ L M ++GC PD
Sbjct: 763 CKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD 822
Query: 318 RASYNIMVDAYGRAG 332
++N+++ +G++G
Sbjct: 823 AFTFNMLLAVHGKSG 837
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I G+ ++A Y E+ + +P TY L+ ++G++E+A+ ++ E++ G
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
L P YN+ I G NP+ A +++ M D C P+ TY + N
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
+L K +F Y +L+ S PT TY L+ G LE+A +F EM YG P+ ++
Sbjct: 873 NLDKALDFFY-DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N I+G K G+ + A ++F+RM + +P ++YT++++ A + AL FNE++S
Sbjct: 932 NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
P+ Y ++N + EEA ++ +++ GI PD+Y YN+LM +
Sbjct: 992 TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051
Query: 303 AYRLISRMHM-GCEPDRASYNIMVDAY 328
A R+ + + G EPD +YN ++ Y
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGY 1078
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 23/285 (8%)
Query: 74 QREVDSNTIWDAFD---SLPPTHATWDDLINVSVQLRLNKK-WDPIVLMSCVSI------ 123
+RE+ + I+D F + PT A+++ LI +++ +K WD M V
Sbjct: 766 KRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825
Query: 124 --LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L+ +G+ + Y E++ RC P TY +++ + S L+KA F ++
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P+ Y IDGL K G ++A+ +F+ M C+P+ + ++IN YGK +
Sbjct: 886 SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +LF M + +P++ +YT LV+ G +EA F +L+ G++PD AYN ++
Sbjct: 946 TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005
Query: 302 ----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA L + M + G PD +YN ++ G AG+ E
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T+ +L+ C + ++A A F MRK G+ P+ YN+ I GLL+ G + A++
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M+ QP+ TY I+ +GK+ ++ A++ F +M++ PNI A + + A
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
G EA+ +F L+ G+ PD YN +M EA L+S M GCEPD
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543
Query: 320 SYNIMVDAYGRAG 332
N ++D+ +AG
Sbjct: 544 VVNSLIDSLYKAG 556
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 134 LHKKAE--FTYLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+H K E E + + I + DTY + KA + G L + V +MRK G +A
Sbjct: 134 VHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAY 193
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YN I L++ G +A+E+++RM + +PS +TY+ ++ GK S M + L EM
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
+PN+ T+T + R G +EA EIF ++ G PD+ Y L++A
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313
Query: 305 ----RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L +M G +PD+ Y ++D + G
Sbjct: 314 ENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ + L ++ P TY +++K Y G +++A + EM + G P +V NS
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID L K G +A ++F RMK P+ TY +++ GK + A++LF M KC
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKC 608
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
PN ++ L++ F + E A ++F ++ +PDV YN ++
Sbjct: 609 SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
I I+ +G+ KA T+ ++ +P L + G L +A+ +F +R+
Sbjct: 441 ITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +V YN + K G +AV + M R+ C+P +I+ KA +
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A ++F+ M+ K P + TY L++ +EG ++A E+FE + P+ ++N L++
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620
Query: 303 ----------AYRLISRMH-MGCEPDRASYNIMV 325
A ++ S+M M C+PD +YN ++
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P TY +L+ A C +G LE A+ +F +M+ G P V+Y + +D G+
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
E + +M+ D P T+T+++++ KA A F+ MR PN+ TY L+
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
R G E+A ++ + ++ G++P Y Y ++ +
Sbjct: 410 CGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYF 447
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 24/223 (10%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
L+LLD+ PT TY + + SG KA F +M+ G+ P+ V N+ +
Sbjct: 422 LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L + G ++A +F ++ + P + TY +M+ Y K + A+ L +EM + C+P+
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ +L+++ + G +EA ++F++++ + P V YN L+ +A L
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
M C P+ S+N ++D + C VEL++K +
Sbjct: 602 SMIXKKCSPNTISFNTLLDCF---------CKNDEVELALKMF 635
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + C P L+ + +G +++A +F M+ L P+ V YN+ + GL K G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
QKA+E+F+ M C P+T ++ +++ + K + +ALK+F++M CKP++ TY
Sbjct: 592 RVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYN 651
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
++ +E A F QL+ + + PD
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQLKKS-MHPD 680
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q +A Y ++ P+ TY+ L+ A E + +EM G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + I L + G +A EIF+RM + C P TYT++I+ A + A
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF +M+++ KP+ Y L++ F G + +E + Q++ G PDV + L+
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA+ M G P+ +YN ++ RAG
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG 416
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ + A + +++ P +Y +L+ C++G +++A F E++
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFM 242
GL P + YN I+GL K ++A+ ++ M+ P TY +LM+NL G A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNL-GLAGMVEQ 1051
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +++ E++ +P++ TY AL+ ++ E A +++ + G P++ Y L
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I G+ ++A Y E+ + +P TY L+ ++G++E+A+ ++ E++ G
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
L P YN+ I G NP+ A +++ M D C P+ TY + N
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 47/255 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G++ +KA + ++ +C P ++ LL +C + +E A +F +M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY-----GKA-- 237
P + YN+ I GL+K A F ++K+ TL+ L G A
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAIS 702
Query: 238 -SKSFMALKLFNEMRS-------------HKCKPNICTYTALVNAFAREG---------L 274
++ FM F RS K I ++N RE L
Sbjct: 703 IARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVL 762
Query: 275 CEEAEE-----IFEQL-QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
C+ E IF++ + GI P + +YN L+ +A+ L M ++GC PD
Sbjct: 763 CKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD 822
Query: 318 RASYNIMVDAYGRAG 332
++N+++ +G++G
Sbjct: 823 AFTFNMLLAVHGKSG 837
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLL+K VF EM G+ S Y + I+ + G + ++
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ RMK + PS TY +IN + + L LF EMR +P+I TY L++A
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PD 317
A GL +EAE +F + GI PD+ Y+ L+E + + R+ C+ PD
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 318 RASYNIMVDAYGRAG 332
SYN++++AY ++G
Sbjct: 317 ITSYNVLLEAYAKSG 331
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+ + ++R IV + L+ A + L +AE + + D +P
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNT----LLSACAIRGLGDEAEMVFRTMNDGGIVPDLT 283
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L++ + LEK + EM G P YN ++ K G+ ++A+ +F +M
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY++++NL+G++ + +LF EM+S P+ TY L+ F G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIM 324
+E +F + IEPD+ Y ++ +A +++ M P +Y +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 325 VDAYGRAGLHE 335
++A+G+A L+E
Sbjct: 464 IEAFGQAALYE 474
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EAY + K+A + ++ + C P +TY++LL + SG + +F EM+
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P A YN I+ +GG ++ V +F M + +P ETY +I GK A
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
K+ M ++ P+ YT ++ AF + L EEA F + G P + +++L+
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E+ ++SR+ G +R ++N ++AY + G E
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFE 544
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ +GQ + +LE+ S P TY +L++ + G ++ +F +M +
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y I KGG + A +I Q M + PS++ YT +I +G+A+ A
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L FN M P+I T+ +L+ +FAR GL +E+E I +L +GI + +NA +EA
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Query: 304 YRLISRMHMG-----------CEPDRASYNIMVDAYGRAGL 333
Y+ + C+PD + ++ Y A L
Sbjct: 537 YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I G++ L K + E+ + +Y L+ AY +G E + + M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 181 RKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPST--------------- 224
+ + PS + YN+ I+ +GG + + + +F M+ + QP
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 225 --------------------ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
TY+ ++ +GK + L EM S P+I +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR--------MHM---G 313
L+ A+A+ G +EA +F Q+Q AG P+ Y+ L+ + R + M
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD A+YNI+++ +G G
Sbjct: 383 TDPDAATYNILIEVFGEGG 401
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 203 GNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ Q+++ +F+ M+R C+P+ YT+MI+L G+ L++F+EM S ++ +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRM 310
YTAL+NA+ R G E + E+ ++++ I P + YN ++ A L + M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 311 -HMGCEPDRASYNIMVDAYGRAGLHE 335
H G +PD +YN ++ A GL +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGD 264
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEA+GQ +L+++A + + + P+ +T+ LL ++ GL++++EA+ + G
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+P + +N+ I+ +GG ++AV+ + M++ C P T ++++Y A
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECR 582
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F EM++ P+I Y ++ + + ++ E+ E++ N + +
Sbjct: 583 EQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS----------NRVSNIH 632
Query: 305 RLISRMHMGCEPDRASYNIM 324
++I +M G D +++ I+
Sbjct: 633 QVIGQMIKGDYDDDSNWQIV 652
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A G+ LH+ A + + +P+ Y +++A+ + L E+A F M + G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS ++S + +GG +++ I R+ + +T+ I Y + K A+
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K + +M +C P+ T A+++ ++ L +E E FE+++ + I P + Y ++ Y
Sbjct: 548 KTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVY 607
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++ + PT TY +++ C G +E A +F EM+ GL P V YNS IDG K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G V F+ MK C+P TY +IN + K K L+ F EM+ KPN+ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM- 310
Y+ LV+AF +E + ++A + + ++ G+ P+ + Y +L++AY RL M
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300
Query: 311 HMGCEPDRASYNIMVDA 327
+G E + +Y ++D
Sbjct: 301 QVGVEWNVVTYTALIDG 317
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ YG+ + + E+ C P TY L+ +C G L K FREM++ G
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSG 233
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ +D K Q+A++ + M+R P+ TYT +++ Y K A
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAF 293
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +EM + N+ TYTAL++ +EAEE+F ++ AG+ P++ +Y AL+ +
Sbjct: 294 RLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGF 353
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P + LL + G + + F++M G P+ YN ID + K G+ + A
Sbjct: 93 RVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAA 152
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ MK P T TY MI+ YGK + + F EM+S C+P++ TY L+N
Sbjct: 153 SGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINC 212
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPD 317
F + G + E F +++ +G++P+V +Y+ L++A+ + +G P+
Sbjct: 213 FCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPN 272
Query: 318 RASYNIMVDAYGRAG 332
+Y +VDAY + G
Sbjct: 273 EHTYTSLVDAYCKIG 287
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ ++ + ++A Y+++ +P E TY L+ AYC G L A + EM + G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + IDGL ++A E+F +M P+ +YT +I+ + KA AL
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +EM+ KP++ Y + + E A+ + ++Q GI+ + + Y LM+AY
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 26/231 (11%)
Query: 137 KAEFTYLELLD------SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
KAE ++ D + C+P + L + E+A F +M++ + P
Sbjct: 40 KAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTR 99
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
N + + G F+ M +P+ TY +MI+ K A LF EM
Sbjct: 100 SCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEM 159
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+ P+ TY ++++ + + G ++ FE+++ EPDV YN L+ + ++
Sbjct: 160 KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKL 219
Query: 311 HMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
G E P+ SY+ +VDA+ C +++ ++K Y
Sbjct: 220 PKGLEFFREMKQSGLKPNVVSYSTLVDAF---------CKEDMMQQALKFY 261
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+AE + +++ + IP +Y L+ + + +++A + EM+ G+ P ++Y ++
Sbjct: 325 KEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTF 384
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM------------- 242
I L + A + M+ + +T YT +++ Y K+
Sbjct: 385 IWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDI 444
Query: 243 ----------------------ALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAE 279
A+ F + + + N YTA+++ +E E A
Sbjct: 445 EVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAAT 504
Query: 280 EIFEQLQGAGIEPDVYAYNALMEA 303
+FEQ+ G+ PD AY +L++
Sbjct: 505 TLFEQMAQKGLVPDRTAYTSLIDG 528
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 90/234 (38%), Gaps = 43/234 (18%)
Query: 143 LELLD---SRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LELLD R I P Y + + C +E A+ V EM++ G+ + +Y + +D
Sbjct: 363 LELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDA 422
Query: 199 LLKGGNPQ-----------------------------------KAVEIFQRMKRD-CCQP 222
K NP KA++ F R+ D Q
Sbjct: 423 YFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQA 482
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+ YT MI+ K + A LF +M P+ YT+L++ ++G +A +
Sbjct: 483 NAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALR 542
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNI-MVDAYGRAGLHE 335
+++ G+E + +L R MG YN+ D+Y + L++
Sbjct: 543 DKMAEIGVESGARFGDLCQNTIKLSLR--MGARVGVQHYNLGSADSYISSSLND 594
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 11/212 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K H K + + ++ +P TY++L++ + G +A +F EMR+ G V
Sbjct: 197 KRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVA 256
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
YNS ++ L KGGN +A ++F+ M + P +Y++ I Y + + A ++ + MR
Sbjct: 257 YNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMR 316
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
+ PN+ TY +V + +EA ++ +++ G+ PD+++YNA+
Sbjct: 317 RYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVN 376
Query: 302 EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A RLISRM C PDR +YN+++ R G
Sbjct: 377 KALRLISRMEKENCMPDRHTYNMVLKMLLRVG 408
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI AY ++ A + ++ C PT TY ++L Y G+ A+ MR
Sbjct: 199 LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSR 258
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I +G ++AV +FQ+MK + P TY +++++GK+ + A
Sbjct: 259 GVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEA 318
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+K+ EM ++ P TY +L++A+A+ GL EEA ++ Q+ GI+PDV+ Y L+
Sbjct: 319 MKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSG 378
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + +GC+P+ ++N ++ +G G
Sbjct: 379 FEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRG 418
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ ++A E+ + PT TY L+ AY GLLE+A + +M G
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + + G K G A+++F M+ C+P+ T+ +I ++G K +
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMM 424
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F++++ C P+I T+ L+ F + G+ + IF++++ AG + +N L+ AY
Sbjct: 425 KVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAY 484
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLHE 335
S + G PD ++YN ++ A R GL E
Sbjct: 485 SRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWE 526
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + SL+++A + ++ P + TY LL + S ++A V +EM G
Sbjct: 270 LISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANG 329
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P++V YNS I KGG ++A+++ +M +P TYT +++ + KA K A+
Sbjct: 330 FSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAI 389
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F EMR+ CKPNICT+ AL+ G E ++F+ ++ PD+ +N L+ +
Sbjct: 390 QVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVF 449
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ M G +R ++N ++ AY R G
Sbjct: 450 GQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCG 488
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 110 KKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY 164
K +D I L +C + L+ +GQ + + + E+ + + DT+ L+ AY
Sbjct: 425 KVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAY 484
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
G ++A AV++ M + G+ P YN+ + L +GG +++ ++ M+ C+P+
Sbjct: 485 SRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNE 544
Query: 225 ETYTLMINLYGKA--------------------------------SKSFMAL---KLFNE 249
+Y+ +++ Y SKS + + + F E
Sbjct: 545 LSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLE 604
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR---- 305
+R P+I T A+++ + R+ + +A EI + P + YN+LM Y
Sbjct: 605 LRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSEN 664
Query: 306 -------LISRMHMGCEPDRASYNIMVDAYGRAG 332
L + G +PDR SYN ++ AY R G
Sbjct: 665 FQKSEEILREVLEKGMKPDRISYNTVIYAYCRNG 698
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 46/250 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC------------------- 165
++ A + L +++E E+ D RC P E +Y+ LL AY
Sbjct: 515 VLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGS 574
Query: 166 ----------------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
S LL + E F E+R+ G+ P N+ + + KA
Sbjct: 575 VETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAH 634
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI M PS TY ++ +Y ++ + ++ E+ KP+ +Y ++ A+
Sbjct: 635 EILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAY 694
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDR 318
R G +EA IF +++ + + PDV YN + Y S + GC+PD+
Sbjct: 695 CRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQ 754
Query: 319 ASYNIMVDAY 328
+YN +VD Y
Sbjct: 755 NTYNSIVDWY 764
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG+K + KA + ++R P+ TY L+ Y S +K+E + RE+ + G
Sbjct: 620 MLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKG 679
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YN+ I + G ++A IF MK P TY I Y S A+
Sbjct: 680 MKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAI 739
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M CKP+ TY ++V+ + + EA + L + ++P V + E
Sbjct: 740 DVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNL--SNLDPHV----SKEEES 793
Query: 305 RLISRM 310
RL+ R+
Sbjct: 794 RLLERI 799
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP---SAVVYNSYIDGLLK 201
LL P D ++ KA S + A AVF +R S+ I L K
Sbjct: 112 LLSDHPHPASDILGII-KALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGK 170
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G A + ++ D YT +IN Y + + A+ LFN+M+ C P + T
Sbjct: 171 AGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLIT 230
Query: 262 YTALVNAFAREGL-CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
Y ++N + + G+ + E ++ G+ PD+Y YN L+ EA L +M
Sbjct: 231 YNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQM 290
Query: 311 HM-GCEPDRASYNIMVDAYGRA 331
+ G PD+ +YN ++D +G++
Sbjct: 291 KLEGFTPDKVTYNALLDVFGKS 312
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+LE+ C P T+ L+K + G + VF +++ P V +N+ +
Sbjct: 391 VFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFG 450
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + IF+ MKR +T+ +I+ Y + A+ ++ M P++
Sbjct: 451 QNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLS 510
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHMGCE 315
TY A++ A AR GL E++E++ +++ +P+ +Y++L+ AY + I RM+ E
Sbjct: 511 TYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAE 568
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 131/328 (39%), Gaps = 47/328 (14%)
Query: 12 KKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILR 71
K+ R GF +++ +FN + RCGS Y S G+ P LS T +L
Sbjct: 463 KEMKRAGFVAERD----TFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLS-TYNAVLA 517
Query: 72 FVQREVDSNTIWDAFDSL---------PPTHATWDDLINVSVQ----LRLNKKWDPI--- 115
+ R +W+ + + P ++ L++ R+N + I
Sbjct: 518 ALAR----GGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSG 573
Query: 116 ------------VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA 163
VL++ S LLIE E +LEL P T +L
Sbjct: 574 SVETHAVLLKTLVLVNSKSDLLIET----------ERAFLELRRRGISPDITTLNAMLSI 623
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
Y ++ KA + M + PS YNS + + N QK+ EI + + +P
Sbjct: 624 YGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPD 683
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+Y +I Y + + A ++F+EM+ P++ TY + +A + + EA ++
Sbjct: 684 RISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVR 743
Query: 284 QLQGAGIEPDVYAYNALMEAYRLISRMH 311
+ G +PD YN++++ Y + + H
Sbjct: 744 YMIKQGCKPDQNTYNSIVDWYCKLDQRH 771
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + ++ C P T+ LL + +G+ + +F+E
Sbjct: 405 CTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKE 464
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G +N+ I + G+ +A+ +++ M P TY ++ +
Sbjct: 465 MKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGL 524
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY-- 297
+ K+ EM +CKPN +Y++L++A+A E E++ +E
Sbjct: 525 WEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKT 584
Query: 298 --------NALMEAYR-LISRMHMGCEPDRASYNIMVDAYGR 330
+ L+E R + G PD + N M+ YGR
Sbjct: 585 LVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGR 626
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL---VNAFAREGLCEEAEEIFEQLQ 286
+I G ++K +AL +F+ +R++ N+ + +A+ + + G A + LQ
Sbjct: 126 IIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQ 185
Query: 287 GAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
G+ DVYAY L+ AY L ++M GC P +YN++++ YG+ G+
Sbjct: 186 NDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGM 243
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 11/212 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K H K + + ++ +P TY++L++ + G +A +F EMR+ G V
Sbjct: 170 KRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVA 229
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
YNS ++ L KGGN +A ++F+ M + P +Y++ I Y + + A ++ + MR
Sbjct: 230 YNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMR 289
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
+ PN+ TY +V + +EA ++ +++ G+ PD+++YNA+
Sbjct: 290 RYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVN 349
Query: 302 EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A RLISRM C PDR +YN+++ R G
Sbjct: 350 KALRLISRMEKENCMPDRHTYNMVLKMLLRVG 381
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TYA+L+ +C + +EKA + EM + G PP Y S ID L + + A E+
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANEL 463
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ +K +C + S Y +MI +G + A+ LF EM+ C P++ TY AL++ R
Sbjct: 464 FQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIR 523
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRAS 320
G+ +EA + ++ G PD+ ++N ++ A + ++M PD S
Sbjct: 524 AGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVS 583
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ RAG+ E
Sbjct: 584 YNTILSCLSRAGMFE 598
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 25/251 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ + A + E+ ++ PTE Y +L Y +E A + EM+ G
Sbjct: 236 LISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKG 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ Y I GL K G A +F M +D C+P +IN+ G+A + AL
Sbjct: 296 CAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDAL 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF +M S +C PN+ TY ++ A F + EA FE+++ GI P + Y L++
Sbjct: 356 KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDG 415
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE-------------GKCS 339
+ +R+ G P A+Y ++D+ GRA +E G+ S
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSS 475
Query: 340 YSLVELSVKHY 350
+ + +KH+
Sbjct: 476 ARVYAVMIKHF 486
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 12/226 (5%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + LI + L + T +++ S C ++ +LK + ++ KA +VF
Sbjct: 124 STTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFY 183
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKA 237
+++ P+A VYN+ I L+ G+ +K E++ + C P T TY+ +I+ +GK
Sbjct: 184 QIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKL 243
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A +LF+EM+ + P YT ++ + + E A + E+++G G P V+ Y
Sbjct: 244 ERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTY 303
Query: 298 NALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ +AY L M GC+PD N +++ GRAG
Sbjct: 304 TELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAG 349
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 146 LDS-RCIPTEDTYALLLKAYCMSGLLEKAEAV-FREMRKYGLPPSAVVYNSYIDGLLKGG 203
+DS +C P TY ++KA S A+ F +M+ G+ PS+ Y IDG K
Sbjct: 361 MDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTN 420
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+KA+ + + M P Y +I+ G+A + A +LF E++ + + + Y
Sbjct: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYA 480
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
++ F G +A ++F +++ G PDVY YNALM EA+ L+ M
Sbjct: 481 VMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMREN 540
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD S+NI+++ + G
Sbjct: 541 GCTPDIKSHNIILNGLAKTG 560
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI++ G+ ++ A + EL ++ + YA+++K + G L A +F EM+K G
Sbjct: 447 LIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + G+++ G +A + + M+ + C P +++ +++N K A+
Sbjct: 507 CSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAI 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F +M+ + P+ +Y +++ +R G+ E A ++ +++ G E D Y++++EA
Sbjct: 567 EMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA- 625
Query: 305 RLISRMHMGCEP 316
+ ++ C P
Sbjct: 626 --VGKVDEDCSP 635
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 23/258 (8%)
Query: 110 KKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSG 168
+K +P + IL++ G H+K Y E+ + C P TY+ L+ A+ G
Sbjct: 188 RKCNPTATVYNTLILMLMHEGH---HEKIHELYNEICSEGNCSPDTITYSALISAF---G 241
Query: 169 LLEKAEAVFR---EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
LE+ + FR EM++ GL P+ +Y + + K + A+ + + MK C P+
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TYT +I GK + A LF M CKP++ L+N R G E+A ++F ++
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 286 QGAGIEPDVYAYNALM-----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
P+V YN ++ EA +M G P +Y I++D + +
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 334 HEGKCSYSLVELSVKHYP 351
E K L E+ K +P
Sbjct: 422 VE-KALLLLEEMDEKGFP 438
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
V ++I+ +G A + E+ C P TY L+ +G++++A ++ R M
Sbjct: 478 VYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNM 537
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G P +N ++GL K G P++A+E+F +MK P +Y +++ +A
Sbjct: 538 RENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMF 597
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
MA KL EM+ + + TY++++ A +
Sbjct: 598 EMAAKLMREMKLKGFEYDSITYSSILEAVGK 628
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 112/199 (56%), Gaps = 11/199 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
++C P TY ++ +YC+ G +E +A+F M G+ P+ V YNS + G ++
Sbjct: 182 TKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHRE 241
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ IF +K++ +P +YT ++N YG++++ A ++FN+M+ + CKPN +Y AL++
Sbjct: 242 ALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALID 301
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---YRLISRMHM--------GCEP 316
A+ G+ +EA + +++ GI+PDV + + L+ A R I+R+ G +
Sbjct: 302 AYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDL 361
Query: 317 DRASYNIMVDAYGRAGLHE 335
+ +YN + +Y G +E
Sbjct: 362 NTVAYNSGIKSYLSFGDYE 380
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 48/260 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I Y + + +A + E+ + RC P D Y L+ A+ +G A + +M +
Sbjct: 16 MMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRA 75
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL------YGKA 237
+PP+ YN+ I+ GN +KA+E+ ++M + P T+ ++++ Y KA
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKA 135
Query: 238 -------------SKSFM----------------ALKLFNEMRSH--KCKPNICTYTALV 266
S +F A++LFN MR KC P++ TYT+++
Sbjct: 136 ISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIM 195
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM---------GCE 315
+++ G E + IF+ + G++P++ AYN+L+ AY R + R + G
Sbjct: 196 HSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 316 PDRASYNIMVDAYGRAGLHE 335
PD SY +++AYGR+ E
Sbjct: 256 PDIVSYTSLLNAYGRSAQPE 275
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 32/270 (11%)
Query: 88 SLPPTHATWDDLINV-------SVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLH 135
++PPT T++++IN L L KK P ++ + ++ A + +
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNI---VLSALKNGAQY 132
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMR--KYGLPPSAVV 191
KA +Y E++ + T DT+ L + +C+ + + EA+ F MR + PP V
Sbjct: 133 SKA-ISYFEIMKGANV-TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y S + G + IF M + +P+ Y ++ Y AL +FN ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
+ +P+I +YT+L+NA+ R E+A E+F +++ +P+ +YNAL++AY
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 305 RLISRMHM----GCEPDRASYNIMVDAYGR 330
+ +H G +PD S + ++ A GR
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++++ Y +++A +F EM+++ P A +YNS I + G + A+ I +
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMED 71
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R P+ TY +IN G A AL+L +M + P++ T+ +++A
Sbjct: 72 MLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQ 131
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM---HMGCEPDRASY 321
+A FE ++GA + D + N ++ EA L + M C PD +Y
Sbjct: 132 YSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY 191
Query: 322 NIMVDAY 328
++ +Y
Sbjct: 192 TSIMHSY 198
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + +H++A + + + P +Y LL AY S EKA VF +M+K
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ ID G ++AV + M++D QP + + ++ G+ +
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ RS N Y + + ++ G E+A E++ ++ + ++PD YN L+
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AYG+ + +KA + ++ + C P + +Y L+ AY +G+L++A + EM K G
Sbjct: 264 LLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 185 LPP-----------------------------------SAVVYNSYIDGLLKGGNPQKAV 209
+ P + V YNS I L G+ +KA+
Sbjct: 324 IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKAL 383
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
E++ M+ +P TY ++I+ K K +L+ F +M K
Sbjct: 384 ELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSK 428
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 34/290 (11%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ------------LRLNKKWD 113
+ L ++Q+E I D F+ P T++ ++ Q L L + D
Sbjct: 281 VEDALGYIQKE-----IADGFE---PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD 332
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P V I + G+ +A+ +++D C+P T+ L+ A C LE+A
Sbjct: 333 PDVFTYNTVINCLSKNGELD---EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ RE+ GL P +N I+ L K G+P + +F+ MK C P TY ++I+
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K AL L EM S+ C + TY +++A ++ EEAEE+F+Q+ GI
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+N L+ +A LI +M G +P +YN ++ Y + G
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++++ C PT T +L+ YC G +E A ++ G P V YN+++ L + G
Sbjct: 255 KMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNG 314
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+++ M ++ P TY +IN K + A + N+M C P+ T+
Sbjct: 315 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 374
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ A + EEA ++ +L G+ PDVY +N L+ A + H+
Sbjct: 375 TLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 434
Query: 313 GCEPDRASYNIMVD 326
GC PD +YNI++D
Sbjct: 435 GCAPDEVTYNILID 448
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ S C P E TY +L+ C G L A + +EM G P S V YN+ ID L K
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M S T+ +I+ KA + A +L +M +P+ T
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y +++ + ++G ++A +I E + G E DV Y L+ A +L+ M
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607
Query: 312 M-GCEPDRASYNIMVDAYGR 330
+ G P +YN ++ + R
Sbjct: 608 IKGIRPTPKAYNPVIQSLFR 627
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + + A E+ P E T+ L++ + G +E A V +M + G
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V N I+G K G + A+ Q+ D +P TY ++ + AL
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+ + M P++ TY ++N ++ G +EA+ I Q+ G PD +N L+
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA L + + G PD ++NI+++A + G
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG 419
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + S K E Y E+ D P T L+KA C + + A + EM +
Sbjct: 166 LLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA 225
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + + + G ++ G+ + A+ + +M C P+ T ++IN Y K + AL
Sbjct: 226 VAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ + +P+ TY V+ + G A ++ + + G +PDV+ YN ++
Sbjct: 286 GYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 345
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA ++++M GC PD ++N ++ A
Sbjct: 346 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 379
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ Y +++ +G + E + REMR+ G A V S+++ + AV++
Sbjct: 87 PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146
Query: 212 FQ-RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++ Q T Y ++N+ + S+ + ++NEM +P++ T L+ A
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRA 319
R A + E++ + PD + LM+ + R+ ++M GC P R
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266
Query: 320 SYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ N++++ Y + G E Y E++ P
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEP 298
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 6/180 (3%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ C + ++ A + +M K GL PS + YNS + K G+ +KA +I + M
Sbjct: 512 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +IN KA ++ +ALKL MR +P Y ++ + R
Sbjct: 572 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 631
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+A +F ++ G PD Y + +R + R G P + +++ +V+ + + E
Sbjct: 632 RDALSLFREMTEVGEPPDALTYKIV---FRGLCR---GGGPIKEAFDFLVEMVNKGFMPE 685
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y LL ++ E+V+ EM G+ P V N+ I L + + AV + + M
Sbjct: 162 VYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 221
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P T+T ++ + + AL++ +M C P T L+N + + G
Sbjct: 222 SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRV 281
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E+A ++ G EPD YN + A +++ M G +PD +YN +
Sbjct: 282 EDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341
Query: 325 VDAYGRAG-LHEGK 337
++ + G L E K
Sbjct: 342 INCLSKNGELDEAK 355
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ + V ++ +G+ VYN ++ L +G + ++ M QP T +
Sbjct: 142 DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I +A + A+ + EM SH P+ T+T L+ F EG E A + ++ G
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 291 EPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMV 325
P N L+ Y + R+ G EPD+ +YN V
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFV 307
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY +L YC G L+KA + M G V Y + I+GL K G Q A+++
Sbjct: 543 PSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL 602
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +P+ + Y +I + + AL LF EM P+ TY + R
Sbjct: 603 LRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCR 662
Query: 272 -EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G +EA + ++ G P+ ++ L E
Sbjct: 663 GGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 695
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 103/191 (53%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY L+ C SG ++A +F+EM ++ + P V ++ +D L K G +A+ +
Sbjct: 277 PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSV 336
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M + +P TY+ +I+ K+S + L NEM S +P++ T++ V+ F +
Sbjct: 337 FGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCK 396
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
+G+ EA+ I + G+ P+V YN+LM+ Y L S+M + GC PD S
Sbjct: 397 KGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS 456
Query: 321 YNIMVDAYGRA 331
YNI++ Y ++
Sbjct: 457 YNILIKGYCKS 467
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y S +A + +++ C P +Y +L+K YC S +++A+ +F EM G
Sbjct: 425 LMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+++ + + I GL + G P A E+F++M C P TY+ +++ + K AL
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
LF ++ + KPN L+ + G E+A+E+F L ++PDV
Sbjct: 545 ALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + SL K++ E+L P T+++ + +C G++ +A+++ M + G
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YNS +DG +A ++F M C P +Y ++I Y K+ + A
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAK 474
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF+EM PN T+T L++ + G A+E+F+++ G PD+ Y+ L+ +
Sbjct: 475 QLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGF 534
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 88/168 (52%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
++ + +K + +A+ +++ P TY L+ YC+ +++A VF M G
Sbjct: 391 VDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGC 450
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + YN I G K +A ++F M P++ T+T +I+ +A + + A +
Sbjct: 451 APDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE 510
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF +M SH C P++ TY+ L++ F + G +EA +FE L+ + ++P+
Sbjct: 511 LFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPN 558
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +L+ C L+ +V ++ K G PS + +N+ I+GL G +A+E +
Sbjct: 141 TLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYI 200
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
QP+ T+T+++N K K+ A+ +M C+P + +Y+ ++++ + L
Sbjct: 201 MSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLV 260
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
EA ++F ++ GI P V YN+L+ +A L M +PD +++I+
Sbjct: 261 NEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSIL 320
Query: 325 VDAYGRAGL 333
VDA + G+
Sbjct: 321 VDALCKEGV 329
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T+ +++ C G A ++M + P V Y+ ID L K +AV++
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ P+ TY +I + + A LF EM KP++ T++ LV+A +
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG+ EA +F ++ +EPD+ Y++L+ E+ L++ M PD +
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386
Query: 321 YNIMVDAYGRAGL 333
++I VD + + G+
Sbjct: 387 FSIWVDVFCKKGM 399
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A ++ + +A + +++ P TY+ L+ C S L +++ + EM
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P V ++ ++D K G +A I M +P+ TY +++ Y S+ A
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEA 438
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
K+F+ M + C P++ +Y L+ + + +EA+++F+++ G+ P+ + L+
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISG 498
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A L +M GC PD +Y+ ++ + + G
Sbjct: 499 LCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T+ L+ C+ G + +A + G P+ + ++GL K G A+
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++M C+P +Y+++I+ K A+ LF MRS P + TY +L+
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRAS 320
G ++A +F+++ ++PDV ++ L +EA + +M + EPD +
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351
Query: 321 YNIMVDAYGRAGL 333
Y+ ++ ++ L
Sbjct: 352 YSSLIHGVCKSSL 364
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 66 AQQILRF-VQREVDSNTIWDAFDSLPP---THATWDDLINVSVQLRLNKKWDPIVLMSCV 121
AQ I+ ++R + N + ++SL H+ D+ V + +NK P VL +
Sbjct: 403 AQSIINLMIERGLRPNVV--TYNSLMDGYCLHSQMDEARKV-FDIMVNKGCAPDVLSYNI 459
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
LI+ Y + +A+ + E+ P T+ L+ C +G A+ +F++M
Sbjct: 460 ---LIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMG 516
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+G PP + Y++ + G K G+ +A+ +F+ +K+ +P+ +++ KA K
Sbjct: 517 SHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLE 576
Query: 242 MALKLFNEMRSHKCKPNI 259
A +LF+ + + +P++
Sbjct: 577 DAKELFSSLSIEELQPDV 594
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +E+A + R + G+ P +NS I GL N + A+E+
Sbjct: 384 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMEL 443
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ MK C P TY ++I+ + AL L EM S C N+ TY L++ F +
Sbjct: 444 FEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCK 503
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
EEAEEIF++++ GI +V YN L+ EA +L+ +M M G +PD+ +
Sbjct: 504 NKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFT 563
Query: 321 YNIMVDAYGRAG 332
YN ++ + RAG
Sbjct: 564 YNSLLTYFCRAG 575
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + C + T +L+ YC G +E+ + EM G P +NS ++GL + G
Sbjct: 271 QMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG 330
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + A+EI M ++ P TY +I K + A+++ N+M PN TY
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS--RMHM--------- 312
L++ +E EEA E+ L GI PDV +N+L++ L + R+ M
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450
Query: 313 GCEPDRASYNIMVDAY-GRAGLHEG 336
GC PD +YN+++D+ R L E
Sbjct: 451 GCHPDEFTYNMLIDSLCSRGRLEEA 475
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + H+ A + E+ C P E TY +L+ + C G LE+A ++ +EM G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN+ IDG K ++A EIF M+ + TY +I+ K + A
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L ++M KP+ TY +L+ F R G ++A +I + + G EPD Y L+
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLI 603
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 143 LELLDSRCI-----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+E+++SR + P T+ +L+KA C + + A + EM YGL P + + +
Sbjct: 195 VEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQ 254
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G ++ GN A+ I ++M C S T ++++ Y K + L +EM + +P
Sbjct: 255 GFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRP 314
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ T+ +LVN R G + A EI + + G +PD++ YN+L+ EA ++
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374
Query: 308 SRMHM-GCEPDRASYNIMV 325
++M + P+ +YN ++
Sbjct: 375 NQMILRDFSPNTVTYNTLI 393
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 11/238 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ + ++A E+ S C TY L+ +C + +E+AE +F EM
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V YN+ IDGL K ++A ++ +M + +P TY ++ + +A A
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKA 580
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE--QLQGAGIEPDVY--AYNA 299
+ M S+ C+P+ TY L+ ++ G E A + QL+G + P Y A
Sbjct: 581 ADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKA 640
Query: 300 LM------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
L EA RL M G PD +Y ++ G G+ LVE++ K +
Sbjct: 641 LFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGF 698
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 14/223 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED--TYALLLKAYCMSGLLEKAEAVFREM 180
++LIE+Y + L +A +++++ D TY LL L+ E V M
Sbjct: 144 LILIESYAKFELFDEA-VAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRM 202
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G+ P +N I L + + A+ + + M P +T+T ++ + +
Sbjct: 203 VSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNM 262
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL++ +M + C + T LV+ + +EG EE +++ G PD + +N+L
Sbjct: 263 NGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSL 322
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ A ++ M G +PD +YN ++ + G
Sbjct: 323 VNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 18/165 (10%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
PS+V+Y + L K G+ + Q MK C+ T+ ++I Y K A+ +
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162
Query: 247 FNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
+ M K + TY L+N + E + ++ GI+PDV +N L++A
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA-- 220
Query: 306 LISRMHM--------------GCEPDRASYNIMVDAYGRAGLHEG 336
+ R H G PD ++ ++ + G G
Sbjct: 221 -LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNG 264
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L RC+P TY +LL+A C ++A + EMR G P V YN ++G+ + G
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E + + C+P+T +Y +++ A + A +L EM C PN+ T+
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISR 309
L++ R+GL E A E+ EQ+ G P+ +YN L+ A+ ++SR
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
GC PD SYN ++ A R+G
Sbjct: 365 ---GCYPDIVSYNTLLTALCRSG 384
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L + A ++ C P +Y LL A+C ++KA A M
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L + G AVE+ ++K C P +Y +I+ KA K+ A
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 424
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+L NEM S +P+I TY+ + RE E+A F ++Q GI P+ YNA++
Sbjct: 425 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 484
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A L + M GC P+ ++Y I+++ GL
Sbjct: 485 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EA ++S +K+A E+ D C P TY +++ C G ++ A + + Y
Sbjct: 200 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 259
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN + GL + A E+ M + C P+ T+ ++I+ + A
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ ++ + C PN +Y L++AF ++ ++A + + G PD+ +YN L+ A
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Query: 304 Y-------RLISRMHM----GCEPDRASYNIMVDAYGRAG 332
+ +H GC P SYN ++D +AG
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++ YC +G + +A R + + A ++ I GL G A+
Sbjct: 124 CGPDVMAYNAMMAGYCGAG---QVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANAL 180
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M R C P TYT+++ K S A+KL +EMR C P+I TY +VN
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG ++A E + L G EP+ +YN ++ +A L+ M GC P+
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 300
Query: 319 ASYNIMVDAYGRAGLHE 335
++N+++ R GL E
Sbjct: 301 VTFNMLISFLCRKGLVE 317
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE E+ C P T+ +L+ C GL+E A V ++ KYG P+++ YN
Sbjct: 282 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPL 341
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K KA+ M C P +Y ++ ++ + +A++L ++++ C
Sbjct: 342 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 401
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P + +Y +++ + G +EA E+ ++ G++PD+ Y+ + +A R
Sbjct: 402 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461
Query: 306 LISRMH-MGCEPDRASYNIMV 325
++ MG P+ YN ++
Sbjct: 462 AFGKVQDMGIRPNTVLYNAII 482
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 37/203 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ A+ ++ KA +L+L+ SR C P +Y LL A C SG ++ A + +++
Sbjct: 341 LLHAFCKQKKMDKA-MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM------------- 230
G P + YN+ IDGL K G ++A+E+ M QP TY+ +
Sbjct: 400 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 459
Query: 231 INLYGKAS----------------------KSFMALKLFNEMRSHKCKPNICTYTALVNA 268
I +GK ++ A+ LF M + C PN TYT L+
Sbjct: 460 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 519
Query: 269 FAREGLCEEAEEIFEQLQGAGIE 291
A EGL +EA ++ ++L G E
Sbjct: 520 LAYEGLIKEARDLLDELCSRGEE 542
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
E Y E++ R T+ +++ C G +KA V +M+ +G PS + YN+ ID
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G KA + + M P+ T+ ++I+ + + A K+F EM+ +P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ TY +L+N G +EA + +++ G G++P+V YNAL+ EA ++
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAG 332
+ G P+ ++N ++DAYG+AG
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAG 418
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY ++ YC +G + KA+A+ +EM + P+ + +N IDG + N A ++
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R QP+ TY +IN K AL L ++M KPN+ TY AL+N F +
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
+ + +EA E+ + + G+ P+V +N L++AY RM G P+ ++
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441
Query: 321 YNIMVDAYGRAG 332
YN ++ + R G
Sbjct: 442 YNCLIVGFCREG 453
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + KA+ E++ R P E T+ +L+ +C + A+ VF EM++ G
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YNS I+GL G +A+ + +M +P+ TY +IN + K A
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++ +++ PN+ T+ L++A+ + G ++A + + G+ P+V YN L+
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF 449
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA +L M G + D +YNI+VDA + G
Sbjct: 450 CREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+L + G + E+V++EM + + + V ++ I+GL K G QKA ++ + MK
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
PS TY +I+ Y KA K F A L EM + + PN T+ L++ F R+ A+
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAY 328
++FE++Q G++P+V YN+L+ EA L +M MG +P+ +YN +++ +
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + A+ + E+ P TY L+ C +G L++A + +M
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ V YN+ I+G K ++A E+ + + P+ T+ +I+ YGKA + A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L + M PN+ TY L+ F REG +EA ++ ++++G G++ D+ YN L++
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483
Query: 303 ---------AYRLISRMHM----GCEPDRASYNIMVDAYGRAG 332
A RL+ M + G + +YN+++ + G
Sbjct: 484 LCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKG 526
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 89 LPPTHATWDDLIN-------VSVQLRLNKKWDPIVLMSCVSI--LLIEAYGQKSLHKKAE 139
L P T++ LIN + L L K + L V LI + +K + K+A
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
++ P T+ L+ AY +G ++ A + M G+ P+ YN I G
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF 449
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK--- 256
+ GN ++A ++ + M+ + + TY ++++ K ++ A++L +EM + K
Sbjct: 450 CREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRR 509
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEP 316
NI TY L+ F +G EEA + ++ G+ P+ Y+ L + M G P
Sbjct: 510 ANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM-----MEKGFIP 564
Query: 317 D 317
D
Sbjct: 565 D 565
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L RC+P TY +LL+A C ++A + EMR G P V YN ++G+ + G
Sbjct: 57 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E + + C+P+T +Y +++ A + A +L EM C PN+ T+
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISR 309
L++ R+GL E A E+ EQ+ G P+ +YN L+ A+ ++SR
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
GC PD SYN ++ A R+G
Sbjct: 237 ---GCYPDIVSYNTLLTALCRSG 256
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L + A ++ C P +Y LL A+C ++KA A M
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L + G AVE+ ++K C P +Y +I+ KA K+ A
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+L NEM S +P+I TY+ + RE E+A F ++Q GI P+ YNA++
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A L + M GC P+ ++Y I+++ GL
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 397
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G L+ A + EM + P A YN+ I GL G A+ + M
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P TYT+++ K S A+KL +EMR C P+I TY +VN +EG +
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
+A E + L G EP+ +YN ++ +A L+ M GC P+ ++N+++
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 180 SFLCRKGLVE 189
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EA ++S +K+A E+ D C P TY +++ C G ++ A + + Y
Sbjct: 72 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 131
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN + GL + A E+ M + C P+ T+ ++I+ + A
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ ++ + C PN +Y L++AF ++ ++A + + G PD+ +YN L+ A
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
Query: 304 Y-------RLISRMHM----GCEPDRASYNIMVDAYGRAG 332
+ +H GC P SYN ++D +AG
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 291
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE E+ C P T+ +L+ C GL+E A V ++ KYG P+++ YN
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K KA+ M C P +Y ++ ++ + +A++L ++++ C
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P + +Y +++ + G +EA E+ ++ G++PD+ Y+ + +A R
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333
Query: 306 LISRMH-MGCEPDRASYNIMV 325
++ MG P+ YN ++
Sbjct: 334 AFGKVQDMGIRPNTVLYNAII 354
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 37/197 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ A+ ++ KA +L+L+ SR C P +Y LL A C SG ++ A + +++
Sbjct: 213 LLHAFCKQKKMDKA-MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM------------- 230
G P + YN+ IDGL K G ++A+E+ M QP TY+ +
Sbjct: 272 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 331
Query: 231 INLYGKAS----------------------KSFMALKLFNEMRSHKCKPNICTYTALVNA 268
I +GK ++ A+ LF M + C PN TYT L+
Sbjct: 332 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 391
Query: 269 FAREGLCEEAEEIFEQL 285
A EGL +EA ++ ++L
Sbjct: 392 LAYEGLIKEARDLLDEL 408
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 112/199 (56%), Gaps = 11/199 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
++C P TY ++ +YC+ G +E +A+F M G+ P+ V YNS + G ++
Sbjct: 182 TKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHRE 241
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ IF +K++ +P +YT ++N YG++++ A ++FN+M+ + CKPN +Y AL++
Sbjct: 242 ALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALID 301
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---YRLISRMHM--------GCEP 316
A+ G+ +EA + +++ GI+PDV + + L+ A R I+R+ G +
Sbjct: 302 AYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDL 361
Query: 317 DRASYNIMVDAYGRAGLHE 335
+ +YN + +Y G +E
Sbjct: 362 NTVAYNSGIKSYLSFGDYE 380
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 48/260 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I Y + + +A + E+ + RC P D Y L+ A+ +G A + +M +
Sbjct: 16 MMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRA 75
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL------YGKA 237
+PP+ YN+ I+ GN +KA+E+ ++M + P T+ ++++ Y KA
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKA 135
Query: 238 -------------SKSFM----------------ALKLFNEMRSH--KCKPNICTYTALV 266
S +F A++LFN MR KC P++ TYT+++
Sbjct: 136 ISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIM 195
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM---------GCE 315
+++ G E + IF+ + G++P++ AYN+L+ AY R + R + G
Sbjct: 196 HSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 316 PDRASYNIMVDAYGRAGLHE 335
PD SY +++AYGR+ E
Sbjct: 256 PDIVSYTSLLNAYGRSAQPE 275
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AYG+ + +KA + ++ + C P + +Y L+ AY +G+L++A + EM K G
Sbjct: 264 LLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 185 LPP-----------------------------------SAVVYNSYIDGLLKGGNPQKAV 209
+ P + V YNS I L G+ +KA+
Sbjct: 324 IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKAL 383
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E++ M+ +P TY ++I+ K K +L+ F +M K Y++L+ ++
Sbjct: 384 ELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSY 443
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHM-GCEPDR 318
++G EAE F ++ +G PDV Y L++AY L M + G PD
Sbjct: 444 IKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 503
Query: 319 ASYNIMVDAYGRAG 332
+ +++A+ + G
Sbjct: 504 IICSSLMEAFNKGG 517
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 32/270 (11%)
Query: 88 SLPPTHATWDDLINV-------SVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLH 135
++PPT T++++IN L L KK P ++ + ++ A + +
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNI---VLSALKNGAQY 132
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMR--KYGLPPSAVV 191
KA +Y E++ + T DT+ L + +C+ + + EA+ F MR + PP V
Sbjct: 133 SKA-ISYFEIMKGANV-TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y S + G + IF M + +P+ Y ++ Y AL +FN ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
+ +P+I +YT+L+NA+ R E+A E+F +++ +P+ +YNAL++AY
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 305 RLISRMHM----GCEPDRASYNIMVDAYGR 330
+ +H G +PD S + ++ A GR
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + +H++A + + + P +Y LL AY S EKA VF +M+K
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM-------------- 230
P+ V YN+ ID G ++AV + M++D QP + + +
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
Query: 231 ----------INL----YGKASKSFM-------ALKLFNEMRSHKCKPNICTYTALVNAF 269
I+L Y KS++ AL+L+ MR KP+ TY L++
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGS 408
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDR 318
++ G E+ FE + + + Y++L+ +Y S GC PD
Sbjct: 409 SKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDV 468
Query: 319 ASYNIMVDAYGRAG 332
+Y ++ AY G
Sbjct: 469 LTYTTLIQAYNAGG 482
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++++ Y +++A +F EM+++ P A +YNS I + G + A+ I +
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMED 71
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R P+ TY +IN G A AL+L +M + P++ T+ +++A
Sbjct: 72 MLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQ 131
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM---HMGCEPDRASY 321
+A FE ++GA + D + N ++ EA L + M C PD +Y
Sbjct: 132 YSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY 191
Query: 322 NIMVDAY 328
++ +Y
Sbjct: 192 TSIMHSY 198
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 35/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +Y ++ +AE T+ + S C P TY L++AY G ++A +F+EM G
Sbjct: 439 LIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--------------------------- 217
+PP A++ +S ++ KGG P++ +++ + MK+
Sbjct: 499 IPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTAS 558
Query: 218 ------DCCQPSTETYTL--MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
D S TL ++N GK K+ +KLF +M + + TY ++
Sbjct: 559 EMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNL 618
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + E+ + ++ +G+ P +Y + ++
Sbjct: 619 LVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVL 650
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I++Y ++KA Y + +S P TY +L+ G ++ F +M +
Sbjct: 370 IKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKV 429
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
+ VY+S I +K G +A F MK+ C P TYT +I Y A
Sbjct: 430 SSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWD 489
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
LF EM + P+ ++L+ AF + G E ++ E ++ I + +Y ++ +
Sbjct: 490 LFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCT 549
Query: 306 LI 307
+I
Sbjct: 550 MI 551
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++DS+ T++ Y+ L+ +Y G L +AE+ F M+K G P + Y + I GG
Sbjct: 423 DMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGG 482
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A ++F+ M+ + P + ++ + K + L+L M+ N +Y
Sbjct: 483 GWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYF 542
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGA 288
++ + + A E+ E L +
Sbjct: 543 EIIASCTMIRDWKTASEMIEYLDSS 567
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 112/199 (56%), Gaps = 11/199 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
++C P TY ++ +YC+ G +E +A+F M G+ P+ V YNS + G ++
Sbjct: 182 TKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHRE 241
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ IF +K++ +P +YT ++N YG++++ A ++FN+M+ + CKPN +Y AL++
Sbjct: 242 ALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALID 301
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---YRLISRMHM--------GCEP 316
A+ G+ +EA + +++ GI+PDV + + L+ A R I+R+ G +
Sbjct: 302 AYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDL 361
Query: 317 DRASYNIMVDAYGRAGLHE 335
+ +YN + +Y G +E
Sbjct: 362 NTVAYNSGIKSYLSFGDYE 380
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 48/260 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I Y + + +A + E+ + RC P D Y L+ A+ +G A + +M +
Sbjct: 16 MMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRA 75
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL------YGKA 237
+PP+ YN+ I+ GN +KA+E+ ++M + P T+ ++++ Y KA
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKA 135
Query: 238 -------------SKSFM----------------ALKLFNEMRSH--KCKPNICTYTALV 266
S +F A++LFN MR KC P++ TYT+++
Sbjct: 136 ISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIM 195
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM---------GCE 315
+++ G E + IF+ + G++P++ AYN+L+ AY R + R + G
Sbjct: 196 HSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 316 PDRASYNIMVDAYGRAGLHE 335
PD SY +++AYGR+ E
Sbjct: 256 PDIVSYTSLLNAYGRSAQPE 275
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 32/270 (11%)
Query: 88 SLPPTHATWDDLINV-------SVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLH 135
++PPT T++++IN L L KK P ++ + ++ A + +
Sbjct: 76 AIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNI---VLSALKNGAQY 132
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMR--KYGLPPSAVV 191
KA +Y E++ + T DT+ L + +C+ + + EA+ F MR + PP V
Sbjct: 133 SKA-ISYFEIMKGANV-TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y S + G + IF M + +P+ Y ++ Y AL +FN ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
+ +P+I +YT+L+NA+ R E+A E+F +++ +P+ +YNAL++AY
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 305 RLISRMHM----GCEPDRASYNIMVDAYGR 330
+ +H G +PD S + ++ A GR
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 64/253 (25%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AYG+ + +KA + ++ + C P + +Y L+ AY +G+L++A + EM K G
Sbjct: 264 LLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 185 LPP-----------------------------------SAVVYNSYIDGLLKGGNPQKAV 209
+ P + V YNS I L G+ +KA+
Sbjct: 324 IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKAL 383
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--------------- 254
E++ M+ +P TY ++I+ K K +L+ F +M K
Sbjct: 384 ELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAEST 443
Query: 255 --------CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
C P++ TYT L+ A+ G + A ++F++++ GI PD ++LMEA+
Sbjct: 444 FSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAF-- 501
Query: 307 ISRMHMGCEPDRA 319
+ G EP+R
Sbjct: 502 ----NKGGEPERV 510
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 34/242 (14%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + +H++A + + + P +Y LL AY S EKA VF +M+K
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ ID G ++AV + M++D QP + + ++ G+ +
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ RS N Y + + ++ G E+A E++ ++ + ++PD YN L+
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGS 408
Query: 302 -------EAYRLISRM------------------------HMGCEPDRASYNIMVDAYGR 330
E+ R M GC PD +Y ++ AY
Sbjct: 409 SKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNA 468
Query: 331 AG 332
G
Sbjct: 469 GG 470
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++++ Y +++A +F EM+++ P A +YNS I + G + A+ I +
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMED 71
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R P+ TY +IN G A AL+L +M + P++ T+ +++A
Sbjct: 72 MLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQ 131
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM---HMGCEPDRASY 321
+A FE ++GA + D + N ++ EA L + M C PD +Y
Sbjct: 132 YSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY 191
Query: 322 NIMVDAY 328
++ +Y
Sbjct: 192 TSIMHSY 198
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE T+ + S C P TY L++AY G ++A +F+EM G+PP A++ +S +
Sbjct: 439 EAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLM 498
Query: 197 DGLLKGGNPQKAVEIFQRMKR---------------------------------DCCQPS 223
+ KGG P++ +++ + MK+ D S
Sbjct: 499 EAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSS 558
Query: 224 TETYTL--MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
TL ++N GK K+ +KLF +M + + TY ++ G + E+
Sbjct: 559 ISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEV 618
Query: 282 FEQLQGAGIEPDVYAYNALM 301
+ ++ +G+ P +Y + ++
Sbjct: 619 LQWMEDSGVHPTLYMFQNVL 638
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 24/191 (12%)
Query: 141 TYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
T LE SR I Y +K+Y G EKA ++ MR+ + P AV YN I G
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGS 408
Query: 200 -----------------------LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
K G +A F MK+ C P TYT +I Y
Sbjct: 409 SKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNA 468
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A LF EM + P+ ++L+ AF + G E ++ E ++ I + +
Sbjct: 469 GGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKS 528
Query: 297 YNALMEAYRLI 307
Y ++ + +I
Sbjct: 529 YFEIIASCTMI 539
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G L +AE+ F M+K G P + Y + I GG ++A ++F+ M+ + P
Sbjct: 435 GKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIIC 494
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+ ++ + K + L+L M+ N +Y ++ + + A E+ E L
Sbjct: 495 SSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDS 554
Query: 288 A 288
+
Sbjct: 555 S 555
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+++C S LI + + +KA L +S +P TY +L+ YC SG ++KA V
Sbjct: 142 VIACTS--LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
M + P V YN+ + L G ++A+E+ R + C P TYT++I
Sbjct: 200 LERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCN 256
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
S A+KL +EMR CKP++ TY L+N +EG +EA + + G +P+V
Sbjct: 257 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT 316
Query: 297 YNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+N + M+A RL++ M GC P ++NI+++ R L
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRL 364
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L +A ++ C+P +Y LL +C +++A M
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L K G AVEI ++ C P TY +I+ K K+ A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+L EMR KP+I TY+ L+ EG +EA +IF ++G I+P YNA+M
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533
Query: 302 -----EAYRLIS----RMHMGCEPDRASYNIMVDA 327
+ R I + GC+P +A+Y I+++
Sbjct: 534 LCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD + C P TY +L++A C + +A + EMRK G P V YN I+G
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 288
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ K G +A++ M CQP+ T+ +++ + A +L +M C P+
Sbjct: 289 ICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPS 348
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH 311
+ T+ L+N R+ L A ++ E++ G P+ +YN L+ + R I +
Sbjct: 349 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE 408
Query: 312 M----GCEPDRASYNIMVDAYGRAG 332
+ GC PD +YN ++ A + G
Sbjct: 409 IMVSRGCYPDIVTYNTLLTALCKDG 433
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++L C P+ T+ +L+ C LL +A V +M K+G P+++ YN +
Sbjct: 333 AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH 392
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + +A+E + M C P TY ++ K K+ A+++ N++ S C P
Sbjct: 393 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TY +++ + G E A E+ E+++ G++PD+ Y+ L+ EA ++
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512
Query: 308 SRMH-MGCEPDRASYNIMV 325
M + +P +YN ++
Sbjct: 513 HDMEGLSIKPSAVTYNAIM 531
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ ++L++ C +G AE + +M + G PS V +N I+ L + +A+
Sbjct: 310 CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAI 369
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M + C P++ +Y +++ + + K A++ M S C P+I TY L+ A
Sbjct: 370 DVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 429
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDR 318
++G + A EI QL G P + YN +++ A L+ M G +PD
Sbjct: 430 CKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDI 489
Query: 319 ASYNIMVDAYGRAG 332
+Y+ ++ G G
Sbjct: 490 ITYSTLLRGLGCEG 503
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 37/182 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ + Q+ +A YLE++ SR C P TY LL A C G + A + ++
Sbjct: 390 LLHGFCQEKKMDRA-IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + YN+ IDGL K G + A E+ + M+R +P TY+ ++ G K A
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508
Query: 244 LKLFNEMRS-----------------------------------HKCKPNICTYTALVNA 268
+K+F++M CKP TYT L+
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Query: 269 FA 270
A
Sbjct: 569 IA 570
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N ++ L++ G ++ ++ +RM P T +I + ++ K+ A ++ + +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
P++ TY L+ + + G ++A ++ E++ + PDV YN ++ E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKE 227
Query: 303 AYRLISR-MHMGCEPDRASYNIMVDA 327
A ++ R M C PD +Y I+++A
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEA 253
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++D C P T+A+LL+ C S LEKA + M++ G P +YN+ I G K +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A + M ++ C P+ TYT +++ KA ++ A+KL +EMR C PNI TY
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC 314
+V E +EA+++ E++ G PDV YN+ + EA + ++RM +
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV-- 178
Query: 315 EPDRASYNIMVDAYGRAG 332
PD SY +++ ++G
Sbjct: 179 TPDVVSYTTVINGLCKSG 196
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 43/226 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI------- 196
E+ D C P TY ++++ C L++A+ + EM G P V YNS+I
Sbjct: 105 EMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCD 164
Query: 197 -------------------------DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+GL K G+ A + +M C P TY+ +I
Sbjct: 165 RVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLI 224
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ + K + A+ L + M C+PN+ Y +L+ A R G +AE++ +++ G
Sbjct: 225 DGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFT 284
Query: 292 PDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVD 326
PDV +YNA ++ A + RM GC P+ +SY+++V+
Sbjct: 285 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVE 330
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++ + C P TY+ L+ +C G +E+A + M K G P+ V YNS + L + G
Sbjct: 207 QMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 266
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ KA ++ M+R P +Y I+ KA + A +F+ M C PN +Y+
Sbjct: 267 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 326
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--H 311
LV ++ ++A + EQ + D+ Y L+ EA L S++
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386
Query: 312 MGCEPDRASYNIMVDAY 328
CEPD YN+M+D++
Sbjct: 387 KICEPDVFFYNVMLDSH 403
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 51/242 (21%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA+ + +++ C P +Y++L++ C L+ A + + R+ ++Y
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVL 363
Query: 196 IDGLLKGGNPQKAVEIFQR-MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+DGL KGG +A +F + + C+P Y +M++ + K + AL++ +M
Sbjct: 364 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423
Query: 255 C----------------------------------KPNICTYTALVNAFAREGLCEEAEE 280
C P+ TY LV+A + G A E
Sbjct: 424 CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 483
Query: 281 IFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
+FE+ G PDV Y+AL+ EAY L +++ D A +N M+ Y
Sbjct: 484 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL------DVALWNAMILGYAE 537
Query: 331 AG 332
G
Sbjct: 538 NG 539
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR-CIPTED 155
DD I + Q R + I+L + +L++ + +A + ++LD + C P
Sbjct: 339 DDAITLVEQAREKYQIVDILLYT----VLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y ++L ++C ++KA + ++M + + V +N + GL A + M
Sbjct: 395 FYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTM 453
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P TY +++ K KS AL+LF E C P++ TY+AL+ E +
Sbjct: 454 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMA 513
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EEA +F +L DV +NA++ Y
Sbjct: 514 EEAYLLFTKL-------DVALWNAMILGY 535
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 68/185 (36%), Gaps = 43/185 (23%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE L ++D IP TY L+ A C G A +F E K G P V Y++ I
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 505
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL+ ++A +F ++ + MI Y + + LKLF E+ +P
Sbjct: 506 GLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEP 558
Query: 258 NICTY------------------------------------TALVNAFAREGLCEEAEEI 281
N T+ L++ FA+ G EEA I
Sbjct: 559 NARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRI 618
Query: 282 FEQLQ 286
F ++
Sbjct: 619 FYSMK 623
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
E Y E++ R T+ +++ C G +KA V +M+ +G PS + YN+ ID
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G KA + + M P+ T+ ++I+ + + A K+F EM+ +P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ TY +L+N G +EA + +++ G G++P+V YNAL+ EA ++
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAG 332
+ G P+ ++N ++DAYG+AG
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAG 418
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY ++ YC +G + KA+A+ +EM + P+ + +N IDG + N A ++
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R QP+ TY +IN K AL L ++M KPN+ TY AL+N F +
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
+ + +EA E+ + + G+ P+V +N L++AY RM G P+ ++
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441
Query: 321 YNIMVDAYGRAG 332
YN ++ + R G
Sbjct: 442 YNCLIVGFCREG 453
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + KA+ E++ R P E T+ +L+ +C + A+ VF EM++ G
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN------------ 232
L P+ V YNS I+GL G +A+ + +M +P+ TY +IN
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389
Query: 233 -----------------------LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
YGKA + A L + M PN+ TY L+ F
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF 449
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
REG +EA ++ ++++G G++ D+ YN L++ A RL+ M +G P
Sbjct: 450 CREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSH 509
Query: 319 ASYNIMVDAYGRAG 332
+YN ++D Y R G
Sbjct: 510 LTYNALIDGYFREG 523
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+L + G + E+V++EM + + + V ++ I+GL K G QKA ++ + MK
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
PS TY +I+ Y KA K F A L EM + + PN T+ L++ F R+ A+
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAY 328
++FE++Q G++P+V YN+L+ EA L +M MG +P+ +YN +++ +
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG+ A +LD+ P TY L+ +C G +++A + +EM G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V YN +D L K G +KAV + M PS TY +I+ Y + S AL
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M + NI TY L+ F +G EEA + ++ G+ P+ Y+ L +
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD-- 587
Query: 305 RLISRMHMGCEPD 317
M G PD
Sbjct: 588 ---EMMEKGFIPD 597
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 89 LPPTHATWDDLIN-------VSVQLRLNKKWDPIVLMSCVSI--LLIEAYGQKSLHKKAE 139
L P T++ LIN + L L K + L V LI + +K + K+A
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
++ P T+ L+ AY +G ++ A + M G+ P+ YN I G
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF 449
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ GN ++A ++ + M+ + + TY ++++ K ++ A++L +EM P+
Sbjct: 450 CREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSH 509
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TY AL++ + REG A + ++ G ++ YN L+ EA RL++
Sbjct: 510 LTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNE 569
Query: 310 M-HMGCEPDRASYNIMVDAYGRAGL 333
M G P+R +Y+I+ D G
Sbjct: 570 MLEKGLIPNRTTYDILRDEMMEKGF 594
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ E+LD +P YA L+ + +G L++A +F + G+ P V YN+ I
Sbjct: 468 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIK 527
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G + A+ RMK+ P TY+ +I+ Y K A K+F EM KCKP
Sbjct: 528 GYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKP 587
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLI 307
N+ TYT+L+N F R+G + +IF ++Q G+ P+V Y+ L++A
Sbjct: 588 NVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFF 647
Query: 308 SRMHMG-CEPDRASYNIMVDAYGRAG 332
M M C P+ ++N +V+ + + G
Sbjct: 648 EEMLMNKCVPNDVTFNYLVNGFSKNG 673
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
CIP Y L+ YC G +E A +F E++ G P+ Y + I+G K G+ +
Sbjct: 235 CIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAID 294
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M + + Y +I+ K A++ M CKP+I TY L++
Sbjct: 295 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGS 354
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDR 318
R+G EA+++ EQ G G+ P+ ++Y L+ AY LI G +PD
Sbjct: 355 CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDL 414
Query: 319 ASYNIMVDAYGRAG 332
+Y +V AG
Sbjct: 415 VTYGALVHGLVVAG 428
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + + K A + P E TY+ ++ Y L+ A+ +FREM K
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y S I+G + G+ ++++IF+ M+ P+ TY+++I + K +K A
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREG---LCEEAEEIFEQLQGA-----------GI 290
F EM +KC PN T+ LVN F++ G + E+ E E Q G
Sbjct: 645 SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGW 704
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
P AYN+++ A +L ++M GC PD S+
Sbjct: 705 APRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSF 746
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y +K + A ++EL +PT +TY ++ +C G + + + EM G
Sbjct: 245 LIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + VYN+ ID K G+ KAVE + M C+P TY +I+ + K A
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L + PN +YT L++A+ ++G + A ++ G +PD+ Y AL+
Sbjct: 365 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 424
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
+ + + G PD YNI++
Sbjct: 425 VVAGEVDVALTIREKMLERGVFPDAGIYNILMSG 458
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 17/250 (6%)
Query: 117 LMSCVSIL-LIEAYGQKSLHKKAEFTYLEL--LDSRCIPTEDTYALLLKAYCMSGLLEKA 173
+++C S+L ++ G+ + +K LE+ RC+ T +++K C G LE+
Sbjct: 165 VIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYST-CIMVKGLCKEGKLEEG 223
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ + G P+ + YN+ IDG K G+ + A +F +K P+ ETY +IN
Sbjct: 224 RKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIING 283
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ K +L EM S N+ Y +++A + G +A E E + G +PD
Sbjct: 284 FCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD 343
Query: 294 VYAYNALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
+ YN L+ EA +L+ + + G P++ SY ++ AY + G ++ + S L
Sbjct: 344 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD-RASNWL 402
Query: 343 VELSVK-HYP 351
+E++ + H P
Sbjct: 403 IEMTERGHKP 412
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + +Y L+ AYC G ++A EM + G P V Y + + GL+ G A+
Sbjct: 376 MPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALT 435
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I ++M P Y ++++ K K A L EM P+ Y LV+ F
Sbjct: 436 IREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFI 495
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--MGC---------EPDRA 319
R G +EA ++FE G+ P + YNA+++ Y M M C PD
Sbjct: 496 RNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEF 555
Query: 320 SYNIMVDAY 328
+Y+ ++D Y
Sbjct: 556 TYSTVIDGY 564
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKA-EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
PT + +++++AY SGL+EKA E + ++ Y P + NS ++ L+K G + A +
Sbjct: 127 PTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARK 186
Query: 211 IFQRMKR-----DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++ M D C + T +M+ K K KL + C PNI Y L
Sbjct: 187 LYDEMLEIDGAGDRCVDNYST-CIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTL 245
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA------YRLISRMHM-----GC 314
++ + ++G E A +F +L+ G P V Y A++ ++ I R+ M G
Sbjct: 246 IDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGL 305
Query: 315 EPDRASYNIMVDAYGRAG 332
+ YN ++DA + G
Sbjct: 306 TVNVQVYNTIIDARYKHG 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 106/278 (38%), Gaps = 59/278 (21%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y ++ A+ + E++ +C P TY L+ +C G L ++ +FREM+ G
Sbjct: 560 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG 619
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK-------- 236
L P+ V Y+ I K A F+ M + C P+ T+ ++N + K
Sbjct: 620 LVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISE 679
Query: 237 ------------------------------ASKSFM-----------ALKLFNEMRSHKC 255
A S + AL+L N+M S C
Sbjct: 680 KGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGC 739
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIF------EQLQGA---GIEPDVYAYNALMEAYRL 306
P+ ++ AL++ EG +E + I +LQ A D Y EA +
Sbjct: 740 IPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEASVI 799
Query: 307 ISRMHMGCEP-DRASYNIMVDAYGRAGLHEGKCSYSLV 343
+ M C+ + NI V + LH+ K +L+
Sbjct: 800 LQTMFEECQSHSKVGDNIQVSFSNQLYLHDTKAGVTLL 837
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L RC+P TY +LL+A C ++A + EMR G P V YN ++G+ + G
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E + + C+P+T +Y +++ A + A +L EM C PN+ T+
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISR 309
L++ R+GL E A E+ EQ+ G P+ +YN L+ A+ ++SR
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
GC PD SYN ++ A R+G
Sbjct: 363 ---GCYPDIVSYNTLLTALCRSG 382
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++ YC +G L+ A + EM + P A YN+ I GL G A+
Sbjct: 122 CGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANAL 178
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M R C P TYT+++ K S A+KL +EMR C P+I TY +VN
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG ++A E + L G EP+ +YN ++ +A L+ M GC P+
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298
Query: 319 ASYNIMVDAYGRAGLHE 335
++N+++ R GL E
Sbjct: 299 VTFNMLISFLCRKGLVE 315
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L + A ++ C P +Y LL A+C ++KA A M
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L + G AVE+ ++K C P +Y +I+ KA K+ A
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 422
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+L NEM S +P+I TY+ + RE E+A F ++Q GI P+ YNA++
Sbjct: 423 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 482
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A L + M GC P+ ++Y I+++ GL
Sbjct: 483 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 523
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EA ++S +K+A E+ D C P TY +++ C G ++ A + + Y
Sbjct: 198 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 257
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN + GL + A E+ M + C P+ T+ ++I+ + A
Sbjct: 258 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 317
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ ++ + C PN +Y L++AF ++ ++A + + G PD+ +YN L+ A
Sbjct: 318 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 377
Query: 304 Y-------RLISRMHM----GCEPDRASYNIMVDAYGRAG 332
+ +H GC P SYN ++D +AG
Sbjct: 378 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE E+ C P T+ +L+ C GL+E A V ++ KYG P+++ YN
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K KA+ M C P +Y ++ ++ + +A++L ++++ C
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P + +Y +++ + G +EA E+ ++ G++PD+ Y+ + +A R
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459
Query: 306 LISRMH-MGCEPDRASYNIMV 325
++ MG P+ YN ++
Sbjct: 460 AFGKVQDMGIRPNTVLYNAII 480
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ A+ ++ KA +L+L+ SR C P +Y LL A C SG ++ A + +++
Sbjct: 339 LLHAFCKQKKMDKA-MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM------------- 230
G P + YN+ IDGL K G ++A+E+ M QP TY+ +
Sbjct: 398 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457
Query: 231 INLYGKAS----------------------KSFMALKLFNEMRSHKCKPNICTYTALVNA 268
I +GK ++ A+ LF M + C PN TYT L+
Sbjct: 458 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517
Query: 269 FAREGLCEEAEEIFEQLQGAGI 290
A EGL +EA ++ ++L G+
Sbjct: 518 LAYEGLIKEARDLLDELCSRGV 539
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ H++A + ++ C P+ TY L+ AY GLLE+A + +EM G
Sbjct: 296 LLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG 355
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y + I GL + G A+ + M R+ C P+ TY +I L+G K +
Sbjct: 356 MKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMM 415
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+++RS P++ T+ L++ F + GL E +F++++ AG P+ Y +L+ +Y
Sbjct: 416 AVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 475
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ RM G PD ++YN ++ A R G
Sbjct: 476 SRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGG 514
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++ LH++A + E+ + P + T+ LL Y + E+A V + M G
Sbjct: 261 LISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAG 320
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YNS I +K G ++A+E+ Q M+ +P TYT +I+ + K AL
Sbjct: 321 CTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAAL 380
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++EM + C PN+CTY AL+ G E +F+ L+ AG PDV +N L+
Sbjct: 381 ATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVF 440
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R +Y ++ +Y R GL +
Sbjct: 441 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 482
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKY 183
L+ A+ + + A + ++D P TY ++ AY MS ++ A+ M++
Sbjct: 190 LVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKED 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN+ I + G ++A ++F MK +P T+ ++++YGKA K A
Sbjct: 250 GIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEA 309
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + M + C P++ TY +L++A+ ++GL EEA E+ ++++ G++PDV Y L+
Sbjct: 310 IGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISG 369
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+ ++ GC P+ +YN ++ +G G
Sbjct: 370 LDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRG 409
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 81/285 (28%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ L + + E+ + IP DTY L+ +Y GL ++A +++ M + G
Sbjct: 436 LLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 495
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK----- 239
+ P YN+ + L +GG ++A ++F M C+P +Y+ +++ Y A K
Sbjct: 496 IYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMK 555
Query: 240 ------------------SFMAL------------KLFNEMRSHKCKPNI---------- 259
+ L K F E+R +C +I
Sbjct: 556 TLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIY 615
Query: 260 -------------------------CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
TY +L++ ++R G CE+ E I +++ +G+ PD
Sbjct: 616 GKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDR 675
Query: 295 YAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAY 328
Y+YN ++ AY RL S M G +PD +YNI + +Y
Sbjct: 676 YSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSY 720
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ GL +A VF EM+ G P V +NS +D K ++A+ + +RM
Sbjct: 257 TYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRM 316
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C PS TY +I+ Y K AL+L EM KP++ TYT L++ R G
Sbjct: 317 ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKI 376
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
+ A + ++ G P++ YNAL++ + + + G PD ++N +
Sbjct: 377 DAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTL 436
Query: 325 VDAYGRAGL 333
+ +G+ GL
Sbjct: 437 LSVFGQNGL 445
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+G ++LH R +PT ++ + +G L +A A+ + P
Sbjct: 145 HGDRALHH-----------PRVLPTA------IRVFARAGCLAEASAIL----EAAPAPD 183
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-ALKLF 247
A Y + + + G + AV +FQRM QP+ TY ++ + Y K S + + L
Sbjct: 184 ASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALV 243
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
+ M+ + + TY L++ R GL EA ++F++++ AG EPD +N+L++ Y
Sbjct: 244 DSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKA 303
Query: 305 -------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
++ RM + GC P +YN ++ AY + GL E
Sbjct: 304 RKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLE 342
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY E++ + C P TY L+K + + G + AVF ++R G P V +N+ +
Sbjct: 382 TYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFG 441
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + +F+ MK+ P +TY +I+ Y + A++++ M P+I
Sbjct: 442 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDIS 501
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY A+++A AR G E+AE++F ++ +PD +Y++L+ AY
Sbjct: 502 TYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAY 545
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 46/243 (18%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK----------------------- 172
++AE + E++D C P E +Y+ LL AY + L+K
Sbjct: 517 EQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTL 576
Query: 173 ------------AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
E F+E+R+ V N+ + K +K E+ M +
Sbjct: 577 VLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSI 636
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
S TY ++++Y + + E++S +P+ +Y ++ A+ R+G +EA
Sbjct: 637 NHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASR 696
Query: 281 IFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYG 329
+F +++ +G++PD+ YN +++Y L+ + GC P+ ++N ++ Y
Sbjct: 697 LFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYS 756
Query: 330 RAG 332
R G
Sbjct: 757 RHG 759
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + +L + +P T+ LL + +GL + VF+E
Sbjct: 396 CTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKE 455
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+K G P Y S I + G +A+EI++RM P TY +++ + +
Sbjct: 456 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 515
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF EM CKP+ +Y++L++A+A ++ + + E + IE +
Sbjct: 516 WEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKT 575
Query: 300 LM-------------EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
L+ +A++ + R C D N MV YG+
Sbjct: 576 LVLVNNKVNNLPETEKAFQELRRRR--CSLDINVLNAMVSIYGK 617
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ E + EL RC + ++ Y + +++K E V M + + SA YNS +
Sbjct: 588 ETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLM 647
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G+ +K I +K +P +Y +I YG+ + A +LF+EM+ K
Sbjct: 648 HMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVK 707
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
P+I TY + ++ + EEA ++ L G P+ +N++++ Y RM
Sbjct: 708 PDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRM 761
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 82 IWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
+ + ++LP T + +L L +N VL + VSI YG+ + KK E
Sbjct: 579 VNNKVNNLPETEKAFQELRRRRCSLDIN------VLNAMVSI-----YGKNKMVKKVEEV 627
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++++ + TY L+ Y G EK E++ E++ G+ P YN+ I +
Sbjct: 628 LSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGR 687
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++A +F MK +P TY + I Y A+ L + + C+PN T
Sbjct: 688 KGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERT 747
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
+ +++ ++R G EA+ L P +Y + E RL
Sbjct: 748 FNSILQGYSRHGRMVEAKSFLSNL------PKIYPGISKQEKQRL 786
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY+ ++ Y GL +A A+F+EMR + P + YN+ +D + GN +A I
Sbjct: 293 PSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSI 352
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ TY +++ YGK K A+ L EM+ PNI TY+AL++A+ +
Sbjct: 353 RRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCK 412
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G +A +F+ ++ AG++PDV Y+ L+ EA L+ M G P+ +
Sbjct: 413 HGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVIT 472
Query: 321 YNIMVDAYGR 330
YN ++DAYGR
Sbjct: 473 YNSLLDAYGR 482
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+A + + A + E+L+ P T+ L+ A + E+ + +F EM + G
Sbjct: 195 VIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERG 254
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMA 243
+ V YN+ I +GG + + M K +PS TY+ MI+ Y K + A
Sbjct: 255 IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEA 314
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ LF EMR+ +P+ Y +V+ AR G +EA I ++ AG D+ YNAL+++
Sbjct: 315 IALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDS 374
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLH 334
Y L+ M G P+ +Y+ ++DAY + G H
Sbjct: 375 YGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFH 416
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + L +A + E+ + P Y ++ + G ++A ++ R M + G
Sbjct: 301 MIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 360
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN+ +D K G ++A+ + + MK+ P+ TY+ +I+ Y K A+
Sbjct: 361 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAM 420
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF +++ +P++ Y+ LV+ + G +EA + E++ GI P+V YN+L++AY
Sbjct: 421 ALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 480
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+++YG++ ++A E+ P TY+ L+ AYC G A A+F++++K G
Sbjct: 371 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK----ASKS 240
L P V+Y++ +DG K G+P +A+ + + M + +P+ TY +++ YG+ K+
Sbjct: 431 LQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKT 490
Query: 241 FMALKLFNEMR-SHKCKPNIC-TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
F L+ F R + KP++ +LV+ ++ L A +F ++ G++P+V ++
Sbjct: 491 FPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFS 550
Query: 299 ALMEA 303
+++ A
Sbjct: 551 SILNA 555
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G + A+ +F G + VY+S I + G KAVEIF+ MK C+P+ Y
Sbjct: 134 GRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVY 192
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I+ K AL++F EM P+ T+ L++A R EE + IF +++
Sbjct: 193 NAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEE 252
Query: 288 AGIEPDVYAYNALMEAYRLISRMHMGC------------EPDRASYNIMVDAYGRAGL-H 334
GI D YN L+ Y +MH+G EP +Y+ M+D Y + GL H
Sbjct: 253 RGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAH 312
Query: 335 EG 336
E
Sbjct: 313 EA 314
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL +Y G +A ++ EM++ G P+ + Y++ ID K G + A+ +FQ +
Sbjct: 367 TYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDV 426
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ QP Y+ +++ K AL L EM + +PN+ TY +L++A+ R+ C
Sbjct: 427 KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQ--C 484
Query: 276 EEAEEIFEQLQ 286
+ F +L+
Sbjct: 485 LMVRKTFPKLR 495
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 203 GNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G +K V+ F M +++ + + +I+ G+ +S A +F+ N+
Sbjct: 97 GQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVF 156
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
Y++L+ A+ R G +A EIFE ++ +P++ YNA+++ A R+ M
Sbjct: 157 VYSSLICAYGRSGKLAKAVEIFEAMK-VVCKPNLVVYNAVIDACSKGGDYPTALRIFREM 215
Query: 311 -HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
G PDR ++N ++ A GRA E +C E+
Sbjct: 216 LEQGMSPDRITFNTLISAAGRANRWE-ECDRIFAEM 250
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 46/226 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T+ L+ C G +++A +F EM + G P+ + YN+ I+GL K GN AV++
Sbjct: 156 PTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDV 215
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKA-----SKSFM------------------------ 242
F++M+++ C+P TY +I+ K + F+
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275
Query: 243 ------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A +LF EM P+ T T LV+ +EG+ EA +FE + G+EP++
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335
Query: 297 YNALMEAY---RLISR--------MHMGCEPDRASYNIMVDAYGRA 331
YNALM+ Y RL++ + GC P SYNI+++ + ++
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + L +A+ + ++ C P +Y +L+ +C S +++A+++ EM
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ + GL + G P++A+ IF+ M P+ TY+++++ + K AL
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
KL M+ K +PNI +T L+ G E A+E+F +L GI P + Y ++
Sbjct: 459 KLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAY 328
EAY L +M G P+ SYN+M+ +
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 553
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 153 TEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T + Y+L L+ C ++ A ++ +M K G+ P+A +N+ I+GL G ++AVE
Sbjct: 120 THNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVE 179
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M R +P+ +Y +IN K + MA+ +F +M + CKP++ TY ++++
Sbjct: 180 LFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLC 239
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
++ L +A E ++ GI P+V+ YN ++ EA RL M PD
Sbjct: 240 KDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTV 299
Query: 320 SYNIMVDAYGRAGL 333
+ I+VD + G+
Sbjct: 300 TLTILVDGLCKEGM 313
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 99/181 (54%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + +A+ E+ P TY+ L++ C G ++A +F+EM Y
Sbjct: 373 ILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSY 432
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ V Y+ +DG K G+ +A+++ + M+ +P+ +T++I A K +A
Sbjct: 433 GLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVA 492
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+++ + +P I TYT ++ +EGL +EA ++F +++ G P+ +YN +++
Sbjct: 493 KELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 552
Query: 304 Y 304
+
Sbjct: 553 F 553
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ ++ + +A + + + P TY L+ YC+ L+ +A+ VF M +
Sbjct: 303 ILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQ 362
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN I+G K +A + M P T TY+ ++ + + A
Sbjct: 363 GCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEA 422
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +F EM S+ PN+ TY+ L++ F + G +EA ++ + +Q +EP++ + L+E
Sbjct: 423 LNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEG 482
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
+ ++ + G P +Y +M+ + GL +
Sbjct: 483 MFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++ + C L+ A EM G+PP+ YN + G G +A
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEAT 283
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M P T T T++++ K A +F M +PNI TY AL++ +
Sbjct: 284 RLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ L EA+++FE + G P V++YN L+ EA L++ M H PD
Sbjct: 344 CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403
Query: 319 ASYNIMVDA---YGRA----GLHEGKCSYSLV 343
+Y+ ++ +GR + + CSY L+
Sbjct: 404 VTYSTLMQGLCQFGRPKEALNIFKEMCSYGLL 435
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+LD P TY ++ +C+ G L +A +F+EM + P V +DGL K G
Sbjct: 253 EMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEG 312
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A +F+ M +P+ TY +++ Y A K+F M C P + +Y
Sbjct: 313 MVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYN 372
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+N F + +EA+ + ++ + PD Y+ LM EA + M
Sbjct: 373 ILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSY 432
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G P+ +Y+I++D + + G
Sbjct: 433 GLLPNLVTYSILLDGFCKHG 452
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E++ +P T +L+ C G++ +A VF M + G+ P+ YN+ +DG
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCL 345
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A ++F+ M R C P +Y ++IN + K+ + A L EM P+ T
Sbjct: 346 QRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVT 405
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
Y+ L+ + G +EA IF+++ G+ P++ Y+ L+ EA +L+ M
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465
Query: 312 -MGCEPDRASYNIMVDAYGRAG 332
EP+ + I+++ AG
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAG 487
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Q K+A + E+ +P TY++LL +C G L++A + + M++
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V + I+G+ G + A E+F ++ D +P+ TYT+MI K S A
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
LF +M PN C+Y ++ F + A + +++ G ++ + L++
Sbjct: 529 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
+M +G+ + N I+ L + + AV I +M + P+ T+ +IN
Sbjct: 113 QMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEG 172
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K A++LFNEM +PN+ +Y ++N + G A ++F++++ G +PDV YN
Sbjct: 173 KIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYN 232
Query: 299 ALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
++ +A +S M G P+ +YN MV +
Sbjct: 233 TIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGF 273
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A A F M + PS + ++ K V + +M + + +
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + A+ + +M P T+ AL+N EG +EA E+F ++ G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 290 IEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDA 327
EP+V +YN ++ A + +M GC+PD +YN ++D+
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
H D+ + + ++ KK +P ++ + LIE + A+ + +L P
Sbjct: 451 HGHLDEALKLLKSMQ-EKKLEPNIVHHTI---LIEGMFIAGKLEVAKELFSKLFADGIRP 506
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY +++K GL ++A +FR+M G P++ YN I G L+ + A+ +
Sbjct: 507 TIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 566
Query: 213 QRMKRDCCQPSTETYTLMINL 233
M + T+ ++++L
Sbjct: 567 DEMVGKRFSANLSTFQMLLDL 587
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY+ ++ Y GL +A A+F+EMR + P + YN+ +D + GN +A I
Sbjct: 294 PSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSI 353
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ TY +++ YGK K A+ L EM+ PNI TY+AL++A+ +
Sbjct: 354 RRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCK 413
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G +A +F+ ++ AG++PDV Y+ L+ EA L+ M G P+ +
Sbjct: 414 HGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVIT 473
Query: 321 YNIMVDAYGR 330
YN ++DAYGR
Sbjct: 474 YNSLLDAYGR 483
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+A + + A + E+L+ P T+ L+ A + E+ + +F EM + G
Sbjct: 196 VIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERG 255
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMA 243
+ V YN+ I +GG + + M K +PS TY+ MI+ Y K + A
Sbjct: 256 IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEA 315
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ LF EMR+ +P+ Y +V+ AR G +EA I ++ AG D+ YNAL+++
Sbjct: 316 IALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDS 375
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLH 334
Y L+ M G P+ +Y+ ++DAY + G H
Sbjct: 376 YGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFH 417
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+++YG++ ++A E+ P TY+ L+ AYC G A A+F++++K G
Sbjct: 372 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 431
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK----ASKS 240
L P V+Y++ +DG K G+P +A+ + + M + +P+ TY +++ YG+ K+
Sbjct: 432 LQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKN 491
Query: 241 FMALKLFNEMR-SHKCKPNI-CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
F L+ F R + KP++ +LV+ ++ L A +F ++ G++P+V ++
Sbjct: 492 FPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFS 551
Query: 299 ALMEA 303
+++ A
Sbjct: 552 SILNA 556
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + L +A + E+ + P Y ++ + G ++A ++ R M + G
Sbjct: 302 MIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 361
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN+ +D K G ++A+ + + MK+ P+ TY+ +I+ Y K A+
Sbjct: 362 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAM 421
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF +++ +P++ Y+ LV+ + G +EA + E++ GI P+V YN+L++AY
Sbjct: 422 ALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 481
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G + A+ +F G + VY+S I + G KAVEIF+ MK C+P+ Y
Sbjct: 135 GRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV-VCKPNLVVY 193
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I+ K AL++F EM P+ T+ L++A R EE + IF +++
Sbjct: 194 NAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEE 253
Query: 288 AGIEPDVYAYNALMEAYRLISRMHMGC------------EPDRASYNIMVDAYGRAGL-H 334
GI D YN L+ Y +MH+G EP +Y+ M+D Y + GL H
Sbjct: 254 RGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAH 313
Query: 335 EG 336
E
Sbjct: 314 EA 315
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL +Y G +A ++ EM++ G P+ + Y++ ID K G + A+ +FQ +
Sbjct: 368 TYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDV 427
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
K+ QP Y+ +++ K AL L EM + +PN+ TY +L++A+ R+ L
Sbjct: 428 KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCL 486
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 203 GNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G +K V+ F M +++ + + +I+ G+ +S A +F+ N+
Sbjct: 98 GQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVF 157
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
Y++L+ A+ R G +A EIFE ++ +P++ YNA+++ A R+ M
Sbjct: 158 VYSSLICAYGRSGKLAKAVEIFEAMK-VVCKPNLVVYNAVIDACSKGGDYPTALRIFREM 216
Query: 311 -HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
G PDR ++N ++ A GRA E +C E+
Sbjct: 217 LEQGMSPDRITFNTLISAAGRANRWE-ECDRIFAEM 251
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 49/244 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C+ G +++A +F EM + G P + Y++ I+GL K GN A+++
Sbjct: 160 PDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQL 219
Query: 212 FQRMKRDCCQPSTETYTLMIN---------------------------------LYGKAS 238
++M+ C+P+ YT +I+ L+G S
Sbjct: 220 LRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCS 279
Query: 239 KSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ A LFNEM PN T+T LV+ +EG+ EA +FE + G EP+ Y
Sbjct: 280 LGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYT 339
Query: 297 YNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAY-GRAGLHEGKCSYSLVE 344
YNALM+ Y L ++M GC P SYNI+++ Y R L E K LVE
Sbjct: 340 YNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKS--LLVE 397
Query: 345 LSVK 348
+S K
Sbjct: 398 MSEK 401
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + +A+ ++D C P +Y +L+ YC L++A+++ EM +
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ + GL + G PQ+A+ +F+ M P TY+ +++ K AL
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEAL 462
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
KL M+ K +P+I Y L+ G E A+E+F +L GI+P + Y ++
Sbjct: 463 KLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGL 522
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAY 328
EAY L +M G P+ SYN+++ +
Sbjct: 523 LKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGF 557
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A + E++ +P T+ +L+ C G++ +A VF M K G P+A YN+
Sbjct: 284 NEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNAL 343
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+DG +A ++ M C P +Y ++IN Y K + A L EM +
Sbjct: 344 MDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+ TY+ L+ + G +EA +F+++ +G+ PD+ Y+ L+ EA +
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463
Query: 306 LISRMHMG-CEPDRASYNIMVDAYGRAG 332
L+ M EPD YNI+++ AG
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAG 491
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 115/219 (52%), Gaps = 13/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y ++ +A+ +E+ + P TY+ L++ C G ++A +F+EM
Sbjct: 377 ILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSS 436
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + Y++ +DGL K G+ +A+++ + M+ +P Y ++I A K +A
Sbjct: 437 GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVA 496
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+++ + +P I TYT ++ +EGL +EA E+F +++ G P+ +YN +++
Sbjct: 497 KELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556
Query: 304 Y----------RLISRMHMG--CEPDRASYNIMVDAYGR 330
+ RLI M +G D +++ +++D R
Sbjct: 557 FLQNQDSSTAIRLIDEM-VGKRFSADSSTFQMLLDLESR 594
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 153 TEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T + Y+L L+ C + A +V +M K G+ P A+ +N+ I+G G ++AV
Sbjct: 124 THNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVG 183
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M R QP +Y+ +IN K+ + MAL+L +M CKPN+ YT ++++
Sbjct: 184 LFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC 243
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
++ L +A ++ ++ GI PDV Y+ ++ EA L + M P+
Sbjct: 244 KDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTV 303
Query: 320 SYNIMVDAYGRAGL-HEGKCSY 340
++ I+VD + G+ E +C +
Sbjct: 304 TFTILVDGLCKEGMVSEARCVF 325
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I++ + +L A E++D P TY+ +L +C G L +A +F EM
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V + +DGL K G +A +F+ M + +P+ TY +++ Y ++ A
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+ + M C P + +Y L+N + + +EA+ + ++ + PD Y+ LM
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L M G PD +Y+ ++D + G
Sbjct: 418 CQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHG 456
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 69/126 (54%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+S+ P Y +L++ ++G LE A+ +F ++ G+ P+ Y I GLLK G
Sbjct: 470 ESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSD 529
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A E+F++M+ D P++ +Y ++I + + S A++L +EM + + T+ L+
Sbjct: 530 EAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Query: 267 NAFARE 272
+ +R+
Sbjct: 590 DLESRD 595
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A A F M + PS V + ++ + K V + +M + + +
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + A+ + +M +P+ T+ L+N EG +EA +F ++ G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 290 IEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+PDV +Y+ ++ A +L+ +M GC+P+ +Y ++D+ + L
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTL 247
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L +A ++ C P +Y LL +C +++A M
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L K G + AVEI ++ C P TY +I+ KA K+ A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+KL +EMR+ KP+ TY++LV +REG +EA + F + + GI P+ +N++M
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 302 -----EAYR----LISRMHMGCEPDRASYNIMVDAYGRAGL 333
+ R L+ ++ GC+P+ SY I+++ G+
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 143 LELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE+L+ S +P TY +++ YC +G + A +V M + P V YN+ + L
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCD 216
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++A+E+ RM + C P TYT++I + S A+KL +EMR C P++ T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM- 310
Y LVN +EG +EA + + +G +P+V +N + M+A +L++ M
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 311 HMGCEPDRASYNIMVDAYGRAGL 333
G P ++NI+++ R GL
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGL 359
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S C P T+ ++L++ C +G AE + +M + G PS V +N I+ L + G +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A++I ++M + CQP++ +Y +++ + K K A++ M S C P+I TY ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEP 316
A ++G E+A EI QL G P + YN +++ A +L+ M +P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 317 DRASYNIMVDAYGRAG 332
D +Y+ +V R G
Sbjct: 483 DTITYSSLVGGLSREG 498
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A +L C P TY +L++A C + A + EMR G P V YN
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G+ K G +A++ M CQP+ T+ +++ + A KL +M
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------- 304
P++ T+ L+N R+GL A +I E++ G +P+ +YN L+ +
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 305 ---RLISRMHMGCEPDRASYNIMVDAYGRAG 332
R++SR GC PD +YN M+ A + G
Sbjct: 401 YLERMVSR---GCYPDIVTYNTMLTALCKDG 428
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 12/236 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEA + S A E+ D C P TY +L+ C G L++A +M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N + + G A ++ M R PS T+ ++IN + A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ + +M H C+PN +Y L++ F +E + A E E++ G PD+ YN ++
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
+A +++++ GC P +YN ++D +AG GK L E+ K
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG-KTGKAIKLLDEMRAK 478
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YLE + SR C P TY +L A C G +E A + ++ G P + YN+ IDGL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE----------- 249
K G KA+++ M+ +P T TY+ ++ + K A+K F+E
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 250 ------------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M + CKPN +YT L+ A EG+ +EA E+ +L
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 286 QGAGI 290
G+
Sbjct: 581 CNKGL 585
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
K M H P+I T L+ F R G +A +I E L+G+G PDV YN ++
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 303 AY----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y ++ RM + PD +YN ++ + +G
Sbjct: 181 GYCKAGEINNALSVLDRMSV--SPDVVTYNTILRSLCDSG 218
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
V N+++ +++ G ++ + + M P T +I + + K+ A K+
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
+ P++ TY +++ + + G A + +++ + PDV YN ++
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGK 219
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+A ++ RM C PD +Y I+++A R
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
E+ Y E++ R +T+ + + C +G L KAE +M+ +G+ P+ V YN+ +D
Sbjct: 184 VEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVD 243
Query: 198 GLLK---GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
G K G KA + M + P+ T+ +I+ + K A K F EM+
Sbjct: 244 GYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG 303
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC 314
KPNI TY +L+N G EEA ++++++ G G++P++ YNAL+ + M
Sbjct: 304 LKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEAT 363
Query: 315 E-----------PDRASYNIMVDAYGRAGLHE 335
+ P+ ++N M+DAY + G+ E
Sbjct: 364 KVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 22/243 (9%)
Query: 107 RLNKKWDPIVLMSCVSI--------LLIEAY---GQKSLHKKAEFTYLELLDSRCIPTED 155
+LNK D I M I L++ Y G KAE E+L ++ P E
Sbjct: 215 KLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEV 274
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ +C + A+ F EM+K GL P+ V YNS I+GL G ++A++++ +M
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P+ TY +IN + K A K+F+++ + PN+ T+ +++A+ +EG+
Sbjct: 335 VGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMM 394
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
EE + + GI P+V YN L+ A L++ M + G + D +YNI+
Sbjct: 395 EEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNIL 454
Query: 325 VDA 327
+D
Sbjct: 455 IDG 457
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 38/287 (13%)
Query: 76 EVDSNTIWDAF------------------DSLPPTHATWDDLIN-VSVQLRLNKK---WD 113
EV NT+ D F L P T++ LIN + +L + WD
Sbjct: 273 EVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD 332
Query: 114 PIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
+V + + LI + +K + K+A + ++ +P T+ ++ AYC G
Sbjct: 333 KMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEG 392
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
++E+ ++ M G+ P+ YN I GL + + Q A E+ M+ + TY
Sbjct: 393 MMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYN 452
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++I+ K KS A KL NEM + KPN TY L++ + EG + A + +++
Sbjct: 453 ILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKE 512
Query: 289 GIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
+P+V YN L++ Y I+++ G P+R +Y+I+
Sbjct: 513 RKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C + AE + EM GL P+ V YN+ +DG G + A+ + RM
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM 509
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ QP+ TY ++I Y K +K A L NEM PN TY + +G
Sbjct: 510 EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFS 569
Query: 276 EEAE 279
+ E
Sbjct: 570 PDIE 573
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 49/219 (22%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L+ AY + L A F + YG S N + L+K +++ M +
Sbjct: 135 MLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKR 194
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN----------- 267
+ T+ + IN +A K A +M++ PN+ TY LV+
Sbjct: 195 RIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKM 254
Query: 268 ----AFARE------------------GLCEE-----AEEIFEQLQGAGIEPDVYAYNAL 300
AF +E G C++ A++ FE++Q G++P++ YN+L
Sbjct: 255 YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSL 314
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+ EA L +M +G +P+ +YN +++ +
Sbjct: 315 INGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGF 353
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +CM+ ++ + EM G P YN+ IDGL K G + +
Sbjct: 8 PNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRL 67
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK C P TY+ +I + K + MA LF++M P++ T+ LV +
Sbjct: 68 FGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCN 127
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRMHMG-CEPDRAS 320
GL ++AE + E++ + PDVY Y +L +EA+R++ RM G C+P+
Sbjct: 128 AGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVI 187
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVE 344
Y ++DA+ AG + +Y L+E
Sbjct: 188 YTALIDAFCSAG--KPTVAYKLLE 209
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L +P T+ L++ YC +GL++ AE + E+ P Y S +DG K
Sbjct: 105 DMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVK 164
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A + +RM + CQP+ YT +I+ + A K +A KL EM + +PN TY
Sbjct: 165 RMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYR 224
Query: 264 ALVNAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAYRLISRMHMGCE 315
+L+ F G EEA ++ E+L+ + D++AY +M+ RM E
Sbjct: 225 SLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALE 277
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ +C + A +F +M K P V + + ++G G A
Sbjct: 76 CNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAE 135
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + + C P TYT +++ + K + A ++ M +C+PN+ YTAL++AF
Sbjct: 136 RLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAF 195
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--HMGCEPD 317
G A ++ E++ G G++P+ Y +L+ EA++++ R+ + C+ D
Sbjct: 196 CSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKAD 255
Query: 318 RASYNIMVDAYGRAG 332
+Y +M+D R G
Sbjct: 256 MFAYRVMMDGLCRTG 270
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E Y L AE E++ S C P TY L+ +C + +A V + M K
Sbjct: 121 LVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGE 180
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V+Y + ID G P A ++ + M + QP+ TY +I + A
Sbjct: 181 CQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAH 240
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ + R+ CK ++ Y +++ R G A E+ E ++ +G P Y AL+
Sbjct: 241 KMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 300
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+SR P+ Y ++ R G HE
Sbjct: 301 EMTLSRKG---RPNAKVYEAVIQELAREGRHE 329
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C+P +TY L+ C +G + + +F EM+ P + Y+ I G K
Sbjct: 35 EMTATGCLPDINTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLD 94
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +F M + P T+ ++ Y A A +L E+ + C P++ TYT
Sbjct: 95 RINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYT 154
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HM 312
+LV+ F + EA + +++ +P+V Y AL++ AY+L+ M
Sbjct: 155 SLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGN 214
Query: 313 GCEPDRASYNIMVDAY-GRAGLHEG 336
G +P+ +Y ++ + G L E
Sbjct: 215 GVQPNAITYRSLIGGFCGTGDLEEA 239
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + +A + C P Y L+ A+C +G A + EM G
Sbjct: 156 LVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNG 215
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMA 243
+ P+A+ Y S I G G+ ++A ++ +R++R + C+ Y +M++ + + A
Sbjct: 216 VQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAA 275
Query: 244 LKLFNEMR---------------------SHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
L+L ++ S K +PN Y A++ AREG E+A +
Sbjct: 276 LELLEAIKQSGTPPRHDIYVALIRGEMTLSRKGRPNAKVYEAVIQELAREGRHEKANALS 335
Query: 283 EQLQG 287
++L G
Sbjct: 336 DELLG 340
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ K+A E+ + C P+ TY L+ AY GLL++A + +M + G
Sbjct: 145 LLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGG 204
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ Y + + G ++ G + A+ +F M+ C+P+ T+ +I ++G K +
Sbjct: 205 INLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMM 264
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F E+++ C P+I T+ L+ F + G+ E +F++++ AG P+ YN L+ AY
Sbjct: 265 KVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAY 324
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ RM G PD ++YN ++ A R GL E
Sbjct: 325 SRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWE 366
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + SLH++A + ++ +P + TY LL Y S ++A V REM G
Sbjct: 110 LITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNG 169
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YNS I + G ++A+E+ +M TYT +++ + +A K A+
Sbjct: 170 CSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAM 229
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F EMR+ CKPNICT+ AL+ G E ++FE+++ + PD+ +N L+
Sbjct: 230 RVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVF 289
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
E + M G P+R +YN ++ AY R G
Sbjct: 290 GQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCG 328
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
A+++ G + A ++ ++ K G Y S I + G ++AV +F++M+
Sbjct: 2 AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALK-LFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ C+P+ TY +++N+YGK + +K LF M++ P+ TY L+ R L E
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMV 325
EA +F+ ++ G PD YNAL++ Y ++ M + GC P +YN ++
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181
Query: 326 DAYGRAGL 333
AY R GL
Sbjct: 182 SAYARDGL 189
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 47/223 (21%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP----------- 205
Y L+ A +G +A VF++M + G P+ + YN ++ K G P
Sbjct: 36 YTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGM 95
Query: 206 -------------------------QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
++A +F+ MK P TY ++++YGK+ ++
Sbjct: 96 KNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRT 155
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+++ EM + C P+I TY +L++A+AR+GL +EA E+ Q+ GI DV+ Y L
Sbjct: 156 KEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTL 215
Query: 301 MEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ + R+ + M GC+P+ ++N ++ +G G
Sbjct: 216 LSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRG 258
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ + + + E+ + +P DTY L+ AY G ++A +++ M + G
Sbjct: 285 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAG 344
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ + L +GG +++ +IF MK C+P+ TY +++ Y + L
Sbjct: 345 ITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRML 404
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L E+ S +P+ LV ++ L EAE F +L+ G PD+ NA++ Y
Sbjct: 405 ALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIY 464
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRA 331
+++ M+ G P A+YN ++ + R+
Sbjct: 465 GRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRS 502
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + E+ +S C+P T+ LL + +G+ + VF+E
Sbjct: 245 CTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 304
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P YN+ I + G+ +A++I++RM P TY ++ +
Sbjct: 305 MKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGL 364
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY-- 297
+ K+F EM+ +CKPN TY +L++A+A + E++ IEP
Sbjct: 365 WEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKT 424
Query: 298 --------NALMEA-YRLISRMHMGCEPDRASYNIMVDAYGR 330
+ L+EA + G PD ++ N M+ YGR
Sbjct: 425 LVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGR 466
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC---------------MSGL 169
++ A + L +++E + E+ D RC P E TY LL AY SG+
Sbjct: 355 VLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGV 414
Query: 170 LE--------------------KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
+E +AE F E+++ G P N+ + + K
Sbjct: 415 IEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTN 474
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI M PS TY ++ ++ ++ + ++ E+ + KP+ +Y ++ A+
Sbjct: 475 EILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAY 534
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDR 318
R G +EA IF +++ +G+ PDV YN + +Y S + GC+P++
Sbjct: 535 CRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQ 594
Query: 319 ASYNIMVDAY 328
+YN +VD Y
Sbjct: 595 NTYNSVVDGY 604
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG++ + K + +S P+ TY L+ + S E++E V +E+ G
Sbjct: 460 MLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKG 519
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YN+ I + G ++A IF M+ P TY + Y S A+
Sbjct: 520 IKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAI 579
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+ M H CKPN TY ++V+ + + ++A
Sbjct: 580 DVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDA 613
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY + K+A + E+ +S +P TY + +Y + E A V R M K+G
Sbjct: 530 VIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHG 589
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAV 209
P+ YNS +DG K + A+
Sbjct: 590 CKPNQNTYNSVVDGYCKHNHRDDAI 614
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 15/209 (7%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL-PPSAVVYNSYI 196
A+ L +++S +P +Y ++ C SG ++ A + R+M G P + +N+ I
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLI 372
Query: 197 DGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
G K G +A ++ MK ++ C P TY +I+ K A L EM++ C
Sbjct: 373 SGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGC 432
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-- 313
KPN+ TY AL+N +A+ G+ EEAE +F+++ G PD+ YN ++ A+ M
Sbjct: 433 KPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEG 492
Query: 314 -----------CEPDRASYNIMVDAYGRA 331
C PD +Y I++D Y RA
Sbjct: 493 VYQQLKNKTSYCSPDAITYRILIDGYCRA 521
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++S IP TY + C +G L+K + EM + G+PP V + S I GL K
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICT 261
A ++F+ M C P + TY++M++ +A++ ++ M++ K C + T
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
+ A + A R G A+ I + +G P++ +YN ++ +A++L +M
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356
Query: 311 -HMGCEPDRASYNIMVDAYGRAG 332
C+PD +N ++ + +AG
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAG 379
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + K+A+ E+ C P TYA L+ Y G+ E+AE++F EM G
Sbjct: 407 LIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKG 466
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYTLMINLYGKASKSFM 242
P + YN+ + K G KA ++Q++K C P TY ++I+ Y +A +
Sbjct: 467 CFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQ 526
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAR-EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L L EM + + TY L+ A E + +A +++Q+ P +N+L+
Sbjct: 527 GLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLV 586
Query: 302 EAY 304
+
Sbjct: 587 RLF 589
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C SG L+ A+A+ ++M G P+ V Y + IDGL K P A++ +RM
Sbjct: 12 TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 71
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R C+P TY +I+ A++ A + E+ + PN TY+ LV R
Sbjct: 72 LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRL 131
Query: 276 EEAEEIFEQLQGAGIEPDVYAY--------NALMEAYRLISR-----MHMGCEPDRASYN 322
++A + ++ G ++ Y A ++ R R + G PD +YN
Sbjct: 132 DQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYN 191
Query: 323 IMVDAYGRAG 332
+ +AG
Sbjct: 192 TFISGLCKAG 201
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 95/255 (37%), Gaps = 48/255 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + A+ ++ D+ C P TY L+ C + A + M + G
Sbjct: 16 LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 75
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YNS I GL A + Q + R+ P+ TY+ ++ + + A
Sbjct: 76 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQAR 135
Query: 245 KLFNEM--RSHKCK-----------------------------------PNICTYTALVN 267
L EM R C P++ TY ++
Sbjct: 136 GLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFIS 195
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRM-HMGCEP 316
+ G ++ E+ E++ GI PDV + N + +A+++ M GC P
Sbjct: 196 GLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 255
Query: 317 DRASYNIMVDAYGRA 331
D +Y+IM+D RA
Sbjct: 256 DSLTYSIMLDNLSRA 270
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M G S V Y + IDGL K G+ A + Q+M C P+ TYT +I+ KA +
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A++ M C+P++ TY +L++ ++A + ++L G P+ Y+
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 300 LM 301
L+
Sbjct: 121 LV 122
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLD--SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++ A+ + + KAE Y +L + S C P TY +L+ YC + E+ + +EM
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536
Query: 183 YGLPPSAVVYNSYIDGLLKGGN-PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G + YN I L + P KA+ ++Q+M C PS + ++ L+ +
Sbjct: 537 RGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVN 596
Query: 242 MALKLFNEM 250
A + EM
Sbjct: 597 SARSMVQEM 605
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
S TYT +I+ K+ A L +M C PN+ TYTAL++ + +A +
Sbjct: 9 SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 68
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISRM 310
+++ +G EPD+ YN+L+ + +RM
Sbjct: 69 KRMLRSGCEPDLVTYNSLIHGLCMANRM 96
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M ++ ++ TYT L++ + G + A+ + +++ AG P+V Y AL+
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMV 325
+A + + RM GCEPD +YN ++
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLI 87
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 11/235 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+VL + LI Q +A Y + C+P T + ++ C +G + A
Sbjct: 266 LVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 325
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F+ M GL P+ VVY++ I GL K A+E+ +MK+ C P T TY ++I+
Sbjct: 326 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 385
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+ A F+EM CKP++ TY LV+ F + G + A +F+ + + P+V
Sbjct: 386 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNV 445
Query: 295 YAYNALMEAY---RLISR-----MHM---GCEPDRASYNIMVDAYGRAGLHEGKC 338
Y L+ R +++ HM GC PD Y+ +VD ++G EG C
Sbjct: 446 VTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 500
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK-Y 183
L++ + + H++A L + +P +T+ +L+ YC++ E+A AV REM + Y
Sbjct: 65 LLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDY 124
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS +N + GL K G A++ F+ + C TYT +++ K K A
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L ++ ++ C P I TY AL+N + G EEA ++ ++ G PDV Y +L+
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EAY+L M + G D Y ++ +AG
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT TY LL C G LE+A + R++ G P V Y S IDGL K +A
Sbjct: 196 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 255
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F+ M T YT +I +A K A ++ M S C P++ T + +++
Sbjct: 256 KLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 315
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPDR 318
+ G A IF+ ++ G+ P+ Y+AL+ A ++++M C PD
Sbjct: 316 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 375
Query: 319 ASYNIMVDAYGRAG 332
+YNI++D ++G
Sbjct: 376 ITYNILIDGLCKSG 389
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +L+ C SG +E A A F EM + G P YN + G K GN A
Sbjct: 371 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAAC 430
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M C P+ TY +I+ K + A F M+ C P+ Y++LV+
Sbjct: 431 GVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGL 490
Query: 270 AREGLCEEAEEIFEQLQGAGI 290
+ G E +F++++ +G+
Sbjct: 491 CKSGKLEGGCMLFDEMERSGV 511
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + A + E+L++ C P TY +L+ +C +G + A VF +M
Sbjct: 380 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSS 439
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V Y + I GL K KA FQ MK C P + Y+ +++ K+ K
Sbjct: 440 HCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGG 499
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
LF+EM N T T L+ + +EA +F ++ G+ P YAYN+++
Sbjct: 500 CMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 555
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 48/263 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A Q+ L ++A + + D R P +Y L+ A+C + L +A V+ EM + G
Sbjct: 42 LLVALAQEGLGREANQVFDRMRD-RYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENG 100
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P VV+N+ I+GLL+G +AV++F+ MK P+ TYT++I + K K MA+
Sbjct: 101 LKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAM 160
Query: 245 KLFNEMRSHKCKPNICTYT-----------------------------------ALVNAF 269
+ F EM+ C+P++ TYT AL+
Sbjct: 161 RCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLL 220
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-MGCE-----------PD 317
+ ++A I++++ G+EP ++ YN +M++Y L R + MGC PD
Sbjct: 221 TNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPD 280
Query: 318 RASYNIMVDAYGRAGLHEGKCSY 340
SY + ++ + R G E C Y
Sbjct: 281 VNSYTVFINGHIRHGRPEEACKY 303
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF MR +G +N + L + G ++A ++F R
Sbjct: 2 DAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDR 61
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M RD P +YT ++ + A A +++NEM + KP++ + ++ R
Sbjct: 62 M-RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 120
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ + +M M GC+PD A+Y
Sbjct: 121 RPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTC 180
Query: 324 MVDAYGRAGLHEGKCSYSLVELSVKHYP 351
++ YG A + + + L E++ K P
Sbjct: 181 LLVGYGNAKRMD-RVTALLEEMTQKGCP 207
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A + E+ D C P TY LL Y + +++ A+ EM +
Sbjct: 145 MLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK 204
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-M 242
G PP YN+ I L P A I+++M + +P+ TY +M+ Y +++ M
Sbjct: 205 GCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMM 264
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ EM P++ +YT +N R G EEA + E++ G++ YN
Sbjct: 265 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 320
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI+ +++ A Y +++ PT TY +++K+Y + G AV+ EM +
Sbjct: 216 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRK 275
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+ P Y +I+G ++ G P++A + + M + + Y + KA K
Sbjct: 276 GICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGK 331
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LLKA C SG ++ A AV +EM +P + VYN IDG + G+ +A ++ Q+M
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 752
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ +P TYT IN KA A K+ EM + KPN+ TYT L++ +AR L
Sbjct: 753 KQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLP 812
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
E+A F++++ AG++PD Y+ LM A L+SR
Sbjct: 813 EKALRCFQEMKLAGLKPDKAVYHCLMTA--LLSR 844
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ AYC + +++AEA+ REM G+ +Y++ +DG GN +K + +F+R+K
Sbjct: 414 YGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLK 473
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
PS +Y +INLY K K AL++ M S K N+ TY+ L+N F +
Sbjct: 474 ECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWA 533
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A IFE + G++PDV YN ++ A+
Sbjct: 534 NAFAIFEDVVKDGLKPDVVLYNNIIRAF 561
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + K+A + + S CIPT T+ L+ +EKA + EM G
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAG 651
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y + + G G+ KA E F +++ + Q TY ++ K+ + AL
Sbjct: 652 VSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL 711
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----- 299
+ EM + N Y L++ +AR G EA ++ +Q++ G++PD++ Y +
Sbjct: 712 AVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINAC 771
Query: 300 -----LMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
++ A +++ M G +P+ +Y ++ + RA L E
Sbjct: 772 CKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPE 813
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A A+F ++ K GL P V+YN+ I G +A+ + + M
Sbjct: 518 TYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEM 577
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ +P++ T+ +I+ + +A + AL +F+ MR C P + T+ AL+ +
Sbjct: 578 QKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQM 637
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A EI +++ AG+ P+ + Y +M Y
Sbjct: 638 EKAIEILDEMALAGVSPNEHTYTTIMHGY 666
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ Y L++ Y G + +A F MR G+ P++ VY S I G + ++A+
Sbjct: 304 PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 363
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + K + A + F E + N Y ++ A+ +
Sbjct: 364 ARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQ 423
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
++AE + +++G GI+ + Y+ +M+ Y ++ G P S
Sbjct: 424 TCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVS 483
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 484 YGCLINLYAKVG 495
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY Q +AE E+ D Y ++ Y M G EK VF +++ G
Sbjct: 417 MIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECG 476
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN------------ 232
PS V Y I+ K G KA+E+ + M+ + + +TY+++IN
Sbjct: 477 FAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAF 536
Query: 233 ----------------LYGKASKSF-------MALKLFNEMRSHKCKPNICTYTALVNAF 269
LY ++F A+ + EM+ + +P T+ +++ F
Sbjct: 537 AIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGF 596
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
AR G + A ++F+ ++ +G P V+ +NAL+ +A ++ M + G P+
Sbjct: 597 ARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNE 656
Query: 319 ASYNIMVDAYGRAG 332
+Y ++ Y G
Sbjct: 657 HTYTTIMHGYAALG 670
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 2/193 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L++ Y ++ +A T+ E + +R I PT Y L+ AY + +E+A + R+M++
Sbjct: 311 LMVSYYARRGDMHRARQTF-ESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKE 369
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ S V Y+ + G K GN A F+ K + Y MI Y +
Sbjct: 370 EGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQ 429
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L EM I Y +++ + G E+ +FE+L+ G P V +Y L+
Sbjct: 430 AEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLIN 489
Query: 303 AYRLISRMHMGCE 315
Y + ++ E
Sbjct: 490 LYAKVGKISKALE 502
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+K+ PS Y LM++ Y + A + F MR+ +P YT
Sbjct: 290 NWQDVVSAFERIKK----PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYT 345
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI 307
+L++A+A EEA +++ G+E + Y+ ++ + I
Sbjct: 346 SLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKI 389
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +A ++ P TY + A C +G + +A + EM
Sbjct: 731 ILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETS 790
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT-LMINLYGKAS 238
G+ P+ Y + I G + P+KA+ FQ MK +P Y LM L +A+
Sbjct: 791 GVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRAT 846
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A Q+ L ++A + + D R P +Y L+ A+C + L +A V+ EM + G
Sbjct: 296 LLVALAQEGLGREANQVFDRMRD-RYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENG 354
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P VV+N+ I+GLL+G +AV++F+ MK P+ TYT++I + K K MA+
Sbjct: 355 LKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAM 414
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F EM+ C+P++ TYT L+ + + + E++ G PD YNAL+
Sbjct: 415 RCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLL 474
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A R+ +M G EP +YN+M+ +Y G
Sbjct: 475 TNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGG 513
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF MR +G +N + L + G ++A ++F R
Sbjct: 256 DAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDR 315
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M RD P +YT ++ + A A +++NEM + KP++ + ++ R
Sbjct: 316 M-RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 374
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ + +M M GC+PD A+Y
Sbjct: 375 RPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTC 434
Query: 324 MVDAYGRA 331
++ YG A
Sbjct: 435 LLVGYGNA 442
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A + E+ D C P TY LL Y + +++ A+ EM +
Sbjct: 399 MLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK 458
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-M 242
G PP YN+ I L P A I+++M + +P+ TY +M+ Y +++ M
Sbjct: 459 GCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMM 518
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ EM P++ +YT +N R G EEA + E++ G++ YN
Sbjct: 519 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 46/154 (29%)
Query: 223 STETYTLMINLYGKAS---------------------------KSFM-------ALKLFN 248
+T TY M+++ GKA KSF A+ +F
Sbjct: 220 TTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFE 279
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------- 301
MR+H + ++ L+ A A+EGL EA ++F++++ PD+ +Y ALM
Sbjct: 280 MMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNAR 338
Query: 302 ---EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA R+ + M G +PD +N M++ R
Sbjct: 339 NLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRG 372
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI+ +++ A Y +++ PT TY +++K+Y + G AV+ EM +
Sbjct: 470 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRK 529
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P Y +I+G ++ G P++A + + M + + Y + KA K +
Sbjct: 530 GICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDIL 589
Query: 244 LKLFNEMR 251
+L +++
Sbjct: 590 YELAQKVK 597
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A + KA E+ C+P TY +L+ C G +E+A VFR+M K+
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + +N+ I+G K G A ++ M++ C+P+ TY ++ + SKS+ A
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L + + P+ TY LV+ F +EG A IF + AG+EPD + + AL++
Sbjct: 402 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKC 338
+ R+ G D ++ ++D + + G + C
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 507
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P TY++L+ C +G LE+A + +EM + G PS Y I G
Sbjct: 235 EENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 294
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA+++ M C P+ TYT++I+ + K A +F +M H P I T+ AL+
Sbjct: 295 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 354
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR-MHMGCE 315
N + +EG A ++ ++ +P++ YN LME A+ L+ R + G
Sbjct: 355 NGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 414
Query: 316 PDRASYNIMVDAYGRAG 332
PDR +YNI+VD + + G
Sbjct: 415 PDRVTYNILVDGFCKEG 431
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + K F + ++++RC+ T T+ L A L +A A+ +M KYG
Sbjct: 493 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 552
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L PS V + I+G + G ++++ +RMK+ C P+ TYT++IN + A
Sbjct: 553 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M S PN TY LV A + G + A +I + G +P+ + Y+AL+ +
Sbjct: 613 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672
Query: 305 RL 306
L
Sbjct: 673 VL 674
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ C P+ TY +L+KA C G+ +KA + EM P+ Y ID L + G
Sbjct: 267 EMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREG 326
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F++M + P T+ +IN Y K A +L + M CKPNI TY
Sbjct: 327 KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN 386
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ R +A + ++ G+ PD YN L++ + +++M
Sbjct: 387 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 446
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G EPD ++ ++D + G
Sbjct: 447 GLEPDGFTFTALIDGLCKLG 466
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 46/223 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C G LE+A + M K G+ V + + IDG K G + +
Sbjct: 450 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 509
Query: 212 FQRMKRDCC-----------------------------------QPSTETYTLMINLYGK 236
F+ M + C PS T+T++I + +
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A ++ ++LK+ M+ C PN+ TYT ++N G EEAE I + G+ P+ +
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629
Query: 297 YNALME----------AYRLISRM-HMGCEPDRASYNIMVDAY 328
Y L++ A++++S M GC+P+ Y+ ++ +
Sbjct: 630 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E + S KA ++D+ +P TY +L+ +C G L A +F M G
Sbjct: 388 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 447
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + + IDGL K G ++A I M + T+T +I+ + K K+
Sbjct: 448 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 507
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF M ++C T+ ++A ++ EA + ++ G+ P V + L+E +
Sbjct: 508 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 567
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+++ RM GC P+ +Y I+++ G
Sbjct: 568 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 606
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 47/222 (21%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM- 215
Y ++ A C +G ++ AE ++ + G V S + + + +A +F++M
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 233
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA------- 268
K + C+P++ TY+++I+ +A + A +L EM C+P+ TYT L+ A
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 293
Query: 269 ----------------------------FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
REG EEA +F ++ G+ P + +NAL
Sbjct: 294 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 353
Query: 301 ME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRA 331
+ A++L+S M G C+P+ +YN +++ R
Sbjct: 354 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 12/207 (5%)
Query: 138 AEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ F L +++ C P TY L++ C KA + R + GL P V YN +
Sbjct: 365 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 424
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K G A IF M +P T+T +I+ K + A + M
Sbjct: 425 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 484
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----YRLIS---- 308
+ T+TAL++ + G ++ +FE + + +N ++A Y+L
Sbjct: 485 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 544
Query: 309 ---RMHMGCEPDRASYNIMVDAYGRAG 332
M G P ++ I+++ + RAG
Sbjct: 545 LGKMMKYGLVPSVVTHTILIEGHCRAG 571
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TYA+L+KA+ +G L++A + M K G P++ +Y++ + G + A +
Sbjct: 625 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 684
Query: 212 FQRMKRDCCQPSTE---TYTLMINLYGKASKSFMALKLFNEMRSHKCK-PNICTYTALVN 267
D S+E L +++ + ALK+ +E++ KC P Y LV
Sbjct: 685 SSTGDLDARSLSSEENDNNCLSSHVF-RLMDVDHALKIRDEIK--KCGVPTEDLYNFLVV 741
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+EG EA+++ + + G+ PD A ++++E Y
Sbjct: 742 GLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHY 777
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LD+R + +E+ L ++ + ++ A + E++K G+P + YN + GL K G
Sbjct: 690 LDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGR 748
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A ++ Q M + P + + +I Y K K L+ + +K P+ +Y
Sbjct: 749 IIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCW 807
Query: 265 LVNAFAREGLCEEAEEIFEQL-QGAGIEPDV 294
+++ EG +EA+++ L + GIE +V
Sbjct: 808 VIHGLRNEGRVQEAQKLVSDLVRHTGIEEEV 838
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ A SG E+A V+ +M G+ PSA Y + I K G +KA++IF+ M
Sbjct: 107 TYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDM 166
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R C+ + TY+ +I+ KA + MAL+LF++M CKPN+ TY +L+ A + G
Sbjct: 167 IRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHW 226
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIM 324
E+A E+FEQ+Q G +PD Y L+ AY + +M GC PD A +N +
Sbjct: 227 EKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSL 286
Query: 325 V 325
+
Sbjct: 287 M 287
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A + ++A Y ++L + P+ TY L+ AY G +EKA +FR+M + G
Sbjct: 111 VISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRG 170
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + Y+S I K G + A+E+F +M ++ C+P+ TY +I A
Sbjct: 171 CERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKAS 230
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+LF +M++ CKP+ TY L+ A+ R G A + FEQ+Q G PD +N+LM
Sbjct: 231 ELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ Y ++L+ C P TY +L+ + + + + G+ YN+ I
Sbjct: 54 AQDVYKQMLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVIS 113
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
K G P++A++++++M +PS TYT +I+ YGK + AL +F +M C+
Sbjct: 114 ACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCER 173
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ TY++L++A + G E A E+F ++ +P+V YN+L+ +A L
Sbjct: 174 NVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELF 233
Query: 308 SRMH-MGCEPDRASYNIMVDAYGRAG 332
+M GC+PD +Y ++ AY R G
Sbjct: 234 EQMQTQGCKPDSITYCGLITAYERGG 259
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 46/223 (20%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ L +A + EMR G+ + Y++ ++ +K A +++++M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 216 KRDCCQPSTETYTLMINLYG-----------------------------------KASKS 240
+ C P+ TY ++I++ K+ +
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
ALK++ +M + KP+ TYTAL++A+ ++G E+A +IF + G E +V Y++L
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSL 181
Query: 301 ME----------AYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ A L S+MH C+P+ +YN ++ A G
Sbjct: 182 ISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGG 224
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 26/249 (10%)
Query: 124 LLIEAYGQKSLHKKAE--FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
L+ + Q+S +KA F Y++ C P E Y +++ G+L+KA +F +M
Sbjct: 43 LIFREFAQRSDWQKALRLFKYMQR-HQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMP 101
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ + + + I+ + G + ++ + RMKR+ P+ TY +IN K +
Sbjct: 102 LNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEW 161
Query: 242 MA-LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
L LF +MR +P+I TY L++A + GL EEA +F + AG+ PD YNAL
Sbjct: 162 EGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNAL 221
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG-----------LHEGKC 338
++ Y L+ M G PD +YNI+++AYGRAG + E C
Sbjct: 222 VDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGC 281
Query: 339 SYSLVELSV 347
+ +V S
Sbjct: 282 TPDVVTFST 290
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL A GL+E+A VFR M + G+ P ++ YN+ +D + + E+
Sbjct: 178 PDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGEL 237
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M++ P Y ++I YG+A K A K+F +M+ C P++ T++ L+ A+ +
Sbjct: 238 LREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGK 297
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRAS 320
G +E +F ++ G EPDV YN L++ + + G EPD ++
Sbjct: 298 HGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMST 357
Query: 321 YNIMVDAYGRAGLHE 335
Y ++ + G+ GLH+
Sbjct: 358 YAGLLYSCGKGGLHK 372
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI AYG+ H+ + + + P TY ++ A GL E +F +MR
Sbjct: 115 LINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHE 174
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN+ + G ++A +F+ M P + TY ++++YG+A +
Sbjct: 175 GIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGV 234
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM P++ Y L+ A+ R G A ++F+Q+Q AG PDV ++ L+EA
Sbjct: 235 GELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEA 294
Query: 304 Y---------RLI--SRMHMGCEPDRASYNIMVDAYGRAGLHE 335
Y RL+ G EPD +YN ++ +G+ G +
Sbjct: 295 YGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQ 337
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 11/229 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEAYG+ ++ A + ++ ++ C P T++ LL+AY G ++ +F +M++
Sbjct: 255 ILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKER 314
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN+ I +GG Q+++ +F + +P TY ++ GK A
Sbjct: 315 GTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAA 374
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ M P +T L+ A+ L EA F ++ +G +PD+ YNAL+ A
Sbjct: 375 KKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGA 434
Query: 304 Y-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYS 341
+ ++ + G D ++YN +++A+GR GL + +S
Sbjct: 435 HAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFS 483
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL-PPSAVVYNSYIDGLLKGGNPQKAVEI 211
T + ++L+ + + +KA +F+ M+++ P+ VY I + + G KA E+
Sbjct: 37 TINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASEL 96
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M + + + ++T +IN YG+ + +L L M+ K PN+ TY ++NA A+
Sbjct: 97 FEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAK 156
Query: 272 EGL-CEEAEEIFEQLQGAGIEPDVYAYNALMEA---YRLISRMHM--------GCEPDRA 319
GL E +F Q++ GI+PD+ YN L+ A L+ M G PD
Sbjct: 157 GGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSI 216
Query: 320 SYNIMVDAYGRAGLHEG 336
+YN +VD YG+A HEG
Sbjct: 217 TYNALVDIYGQADRHEG 233
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YGQ H+ E+ + P Y +L++AY +G A +F++M++ G
Sbjct: 221 LVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAG 280
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V +++ ++ K G + +F MK +P TY +I ++G+ ++
Sbjct: 281 CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESI 340
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
LF ++ +P++ TY L+ + + GL + A++I + + + P + L+ A
Sbjct: 341 NLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAY 400
Query: 304 ----------YRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
Y S GC+PD +YN ++ A+ GL+
Sbjct: 401 GNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLY 441
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + G+ LHK A+ + +L S PT D + L+ AY + L +A F M++ G
Sbjct: 361 LLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESG 420
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ I GG +A + M + TY +I +G+ A+
Sbjct: 421 CKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAI 480
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ +M +C PN TY AL+ + GL +EA+ F LQ G P V +Y L+
Sbjct: 481 EFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLL 537
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 72 FVQREVDSNTIWDAFDS-LPPTHATWDDLINVSVQLRLNKKWDPI---VLMSCVS----- 122
F Q + N WD D + P +T+ L+ + L+K I +L S V+
Sbjct: 335 FFQESI--NLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDG 392
Query: 123 -ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
LI AYG +L+ +A + + + +S C P +TY L+ A+ GL +A + + M
Sbjct: 393 FTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMI 452
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------G 235
G+ YNS I+ +GG A+E + M+ C P+ TY ++ +Y
Sbjct: 453 DEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFD 512
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+A F+ L++ E+ P++ +Y L++ AR ++A ++ E++ +EP++
Sbjct: 513 EAKAQFLDLQVGGEL------PSVDSYCLLLSVCARRNRWDDASKVLEEM----LEPNM 561
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 20/283 (7%)
Query: 61 VLSPTAQQILRFVQREV-DSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMS 119
VLS + + L ++R+V N + + F L + L + ++L + D + S
Sbjct: 103 VLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKI---IKLGFEPDAVTFSS 159
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
++ L E + EF + E++ S P TY ++K +C G A + ++
Sbjct: 160 LINGLCFE----DKFARAMEF-FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKK 214
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M K G P V+YN+ IDGL K +A++IF +K +P TY+++++ + +
Sbjct: 215 MDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQ 274
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A LFNEM S P++ T+ LV+ +EG+ EA+ I + + G+EP+ YN+
Sbjct: 275 KEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNS 334
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRA 331
LM Y L ++ + GC P+ SYNI+++ Y +A
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKA 377
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C S E+A A+F EM + P V +N +D L K G +A I
Sbjct: 257 PDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGI 316
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P+ TY ++N Y +K F A +F+ M + C PN+ +Y L+N + +
Sbjct: 317 IKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCK 376
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
+EA E+F+++ G+ P+ + YN L+ EA L M GC PD +
Sbjct: 377 AQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVT 436
Query: 321 YNIMVDAYGRAG 332
I++D+ + G
Sbjct: 437 CTILLDSLCKLG 448
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 23/226 (10%)
Query: 122 SILLIEAYGQK-SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL--LEKAEAVFR 178
+++ I+ YG SL K+ E +E D + + C S L ++ A +V
Sbjct: 93 ALVRIKHYGTVLSLSKRIELLRIE---------RDVFHFNILINCFSRLQRVDFAFSVLG 143
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
++ K G P AV ++S I+GL +A+E F M QP+ TY +I + K
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K+ +A+ L +M +P+I Y +++ ++ L EA +IF +++G G+ PDV+ Y+
Sbjct: 204 KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263
Query: 299 ALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAGL 333
LM EA L + M + PD ++NI+VD + G+
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 90/180 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ ++ + +A+ +++ P TY L+ YC+ + +A VF M
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN I+G K +A E+F M P+T Y +I+ +A + A
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA 418
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF +M++ C P++ T T L+++ + G + A +F +Q + ++P++ Y+ L+ A
Sbjct: 419 RELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y ++ +A + ++ C+P +Y +L+ YC + +++A +F EM G
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YN+ I GL + G +A E+F+ M+ C P T T++++ K AL
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREG 273
+LF M+ KPN+ TY L+ A + G
Sbjct: 455 RLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P+ TY+ L+ +CM L++A+ +F M
Sbjct: 946 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 1005
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I G K ++ +E+F+ M + +T TY ++I +A MA
Sbjct: 1006 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 1065
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
++F EM S PNI TY L++ + G E+A +FE LQ + +EP +Y YN ++E
Sbjct: 1066 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 1125
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +PD +YN M+ + R G E
Sbjct: 1126 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+ +C + A ++ +M + G P V YN+ ID L K A +
Sbjct: 256 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 315
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ ++R +P+ TYT ++N +S+ A +L ++M K PN+ TY+AL++AF +
Sbjct: 316 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 375
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
G EA+E+FE++ I+PD+ Y++L+ L R+ GC D S
Sbjct: 376 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 435
Query: 321 YNIMVDAYGRA 331
YN +++ + +A
Sbjct: 436 YNTLINGFCKA 446
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L++ +G + A+ +F+EM G+PP+ + YN+ +DGL K G +KA+ +F+ +
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P+ TY +MI KA K LF + KP++ Y +++ F R+G
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 1166
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EEA+ +F++++ G P+ YN L+ A
Sbjct: 1167 EEADALFKEMKEDGTLPNSGCYNTLIRA 1194
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 31/229 (13%)
Query: 134 LHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
LH KA + L+D C P TY +++ C G + A + +M + L P
Sbjct: 812 LHNKAS-EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 870
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKL 246
++YN+ IDGL K + A+ +F+ M+ +P+ TY+ +I+ YG+ S A +L
Sbjct: 871 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD---ASRL 927
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
++M K P++ T++AL++AF +EG EAE++++++ I+P + Y++L+ + +
Sbjct: 928 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987
Query: 307 ISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
R+ C PD +YN ++ +G C Y VE
Sbjct: 988 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLI---------KGFCKYKRVE 1027
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ + P T++ L+ A+ G L +AE ++ EM K + PS V Y+S I+G
Sbjct: 930 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 989
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F+ M C P TY +I + K + +++F EM N TY
Sbjct: 990 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 1049
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRM 310
L+ + G C+ A+EIF+++ G+ P++ YN L++ + + R
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
M EP +YNIM++ +AG
Sbjct: 1110 KM--EPTIYTYNIMIEGMCKAG 1129
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P TY+ LL A+ +G + +A+ +F EM + + P V Y+S I+GL
Sbjct: 353 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 412
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F M C +Y +IN + KA + +KLF EM N TY
Sbjct: 413 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 472
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L+ F + G ++A+E F Q+ GI PD++ YN L+
Sbjct: 473 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 510
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC S + +A A+ +M G P+ V +N+ I GL +A+ +
Sbjct: 763 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 822
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM CQP TY +++N K + +A L N+M K +P + Y +++ +
Sbjct: 823 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 882
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F++++ GI P+V Y++L+ +A RL+S M PD +
Sbjct: 883 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 942
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 943 FSALIDAFVKEG 954
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ C ++ A +F+EM G+ P+ V Y+S I L G A + M
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T++ +I+ + K K A KL++EM P+I TY++L+N F +
Sbjct: 933 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR-----------ASYNIMV 325
EA+++FE + PDV YN L++ + R+ G E R +YNI++
Sbjct: 993 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052
Query: 326 DAYGRAG 332
+AG
Sbjct: 1053 QGLFQAG 1059
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ + C + + A F+E+ + G+ P+ V Y + ++GL A +
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + P+ TY+ +++ + K K A +LF EM P+I TY++L+N
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 410
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+EA ++F+ + G DV +YN L+ + +L M G + +
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 470
Query: 321 YNIMVDAYGRAG 332
YN ++ + +AG
Sbjct: 471 YNTLIQGFFQAG 482
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ + +A+ + E++ P TY+ L+ C+ +++A +F M G
Sbjct: 369 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 428
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN+ I+G K + +++F+ M + +T TY +I + +A A
Sbjct: 429 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 488
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F++M P+I TY L+ G E+A IFE +Q ++ D+ Y ++
Sbjct: 489 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 548
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG-LHEGKCSYS 341
EA+ L + + G +PD +Y M+ G LHE + Y+
Sbjct: 549 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 597
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 88 SLPPTHATWDDLIN-VSVQLRL---NKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKA 138
S+ P T+ LIN + + R+ N+ +D +V C++ + LI + + +
Sbjct: 393 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 452
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ E+ + TY L++ + +G ++KA+ F +M +G+ P YN + G
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G +KA+ IF+ M++ TYT +I K K A LF + KP+
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I TYT +++ +GL E E ++ +++ G+
Sbjct: 573 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Q A+ + E++ P TY LL C +G LEKA VF +++
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ YN I+G+ K G + ++F + +P Y MI+ + + A
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF EM+ PN Y L+ A R+G E + E+ ++++ G D
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A A+F EM K PS + ++ + + K + + ++M+ + TY++
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL + +M +PNI T ++L+N + EA + +Q+ G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+P+ +N L+ EA LI RM GC+PD +Y ++V+ + G
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 849
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR P+ ++ LL A + ++ +M+ G+P + Y+ I+ +
Sbjct: 685 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 744
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P+ T + ++N Y + + A+ L ++M +PN T+
Sbjct: 745 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 804
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +++ G +PD+ Y ++ A+ L+++M G
Sbjct: 805 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 864
Query: 314 -CEPDRASYNIMVDA 327
EP YN ++D
Sbjct: 865 KLEPGVLIYNTIIDG 879
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ +C G E+A+A+F+EM++ G P++ YN+ I L+ G+ + + E+
Sbjct: 1148 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 1207
Query: 212 FQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
+ M+ T L+ N+ G+ KSF+ +
Sbjct: 1208 IKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 1242
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 12/214 (5%)
Query: 132 KSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+ H + + L+LL ++ +P + TY++ + C S +E+A +F +++ G+ + V
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y + IDG K G +A+ + +RM + C P++ TY +I K K L + M
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
KP + TYT L+ REG + A +F Q+ G +PDVY Y A +
Sbjct: 591 SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNV 650
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
EA +++RM G PD +Y +++ AY R GL
Sbjct: 651 KEAEGMMARMIEAGVMPDSLTYTLLISAYERLGL 684
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ AY + +A ++ + P TY L+ YC + + A VF M G
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V Y + I GL + G + + +F++M+ D C P+ TYT++I+ ++ +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LFNEMR C+PN+ TYT +V+A +E +E+ I ++ G+ P V YNAL+ Y
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399
Query: 305 ----RLISRMHM-------GCEPDRASYNIMVDAYGR 330
R+ + + + C P+ +YN ++ + +
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSK 436
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C P TY +++ A C L+++ + EM + GL PS V YN+ I G + G
Sbjct: 344 EMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+EI M+ + C+P+ TY +I + K A+ L ++M K P++ TY
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYN 463
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------- 315
+L++ + G + A ++ + L+ G+ PD + Y+ ++ RM C+
Sbjct: 464 SLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523
Query: 316 ---PDRASYNIMVDAYGRAG 332
+ Y ++D + +AG
Sbjct: 524 GIKANEVMYTALIDGHCKAG 543
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ KA ++L+S+ P+ TY L+ C +G + A + +++ G
Sbjct: 430 LICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ +ID L K ++A ++F +K + + YT +I+ + KA K A+
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAI 549
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
L M S C PN TY +L+ +EG +E + E + G++P V Y L+E
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM 609
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A R+ ++M G +PD +Y + Y +G
Sbjct: 610 LREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSG 648
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C E +Y ++ C +G +++ ++F++MR+ P+ Y I L + +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F M+ C+P+ TYT+M++ K K + ++ NEM P++ TY AL+ +
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
EG E A EI ++ P+ YN L+ +A L+S+M P
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSL 459
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+YN ++ +AG + +Y L++L
Sbjct: 460 VTYNSLIHVQCKAGHFDS--AYKLLDL 484
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 137 KAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A L L++S C P E TY L+ + + KA + +M + L PS V YNS
Sbjct: 406 EAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSL 465
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I K G+ A ++ +K + P TY++ I+ K+ + A LFN ++
Sbjct: 466 IHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGI 525
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
K N YTAL++ + G +EA + E++ P+ YN+L+ E
Sbjct: 526 KANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLS 585
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ M MG +P A+Y I+++ R G
Sbjct: 586 MVENMSKMGVKPTVATYTILIEEMLREG 613
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y E+L+ +P T ++ AY G + +A ++ + GL P + Y S I G
Sbjct: 201 VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ + A ++F M C+ + +YT +I+ +A + + LF +MR C P +
Sbjct: 261 RNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVR 320
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISR- 309
TYT +++A E ++F +++ EP+V+ Y +++A R+++
Sbjct: 321 TYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEM 380
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
M G P +YN ++ Y G
Sbjct: 381 MEKGLVPSVVTYNALIRGYCEEG 403
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P TY L+ C G +++ ++ M K G+ P+ Y I+ +L+ G+ A
Sbjct: 560 CLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHAN 619
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F +M +P TYT I+ Y + A + M P+ TYT L++A+
Sbjct: 620 RVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY 679
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
R GL +A + +++ AG +P +N L+
Sbjct: 680 ERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y LL ++++ + V+ EM + P+ N+ ++ K GN +A ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P + TYT +I Y + + A K+FN M + C+ N +YT +++ G
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIM 324
+E +F++++ P V Y + +E L + M CEP+ +Y +M
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360
Query: 325 VDA 327
VDA
Sbjct: 361 VDA 363
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 20/268 (7%)
Query: 77 VDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNK-KWDPIVLMSCVSILLIEAYGQKSLH 135
V N I D F + +W ++ V ++R K+D +C ++L A ++ L
Sbjct: 246 VTYNVILDVFGKM---GRSWRKILGVLDEMRSKGLKFDEF---TCSTVL--SACAREGLL 297
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ + EL P TY LL+ + +G+ +A +V +EM + P +V YN
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ ++ G ++A + + M + P+ TYT +I+ YGKA K ALKLF M+ C
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
PN CTY A+++ ++ E ++ ++ G P+ +N ++ R
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 306 LISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ M G EPDR ++N ++ AYGR G
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCG 505
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ ++ +A E+ ++ C TY L+ AY +G ++A V M K G
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ Y + ID K G +A+++F MK C P+T TY +++L GK S+S +
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ +M+S+ C PN T+ ++ +G+ + +F +++ G EPD +N L+ AY
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 305 ----RLISRMHMGCEPDRASYNIMVDAY 328
+ M E RA +N V Y
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTY 529
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEM 250
Y + + + G +KA+++F+RMK P+ TY ++++++GK +S+ L + +EM
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
RS K + T + +++A AREGL EA+E F +L+ G EP YNAL+
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 302 -EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
EA ++ M C D +YN +V AY RAG K + ++E+ K
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGF--SKEAAGVIEMMTK 379
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 94/233 (40%), Gaps = 53/233 (22%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LLD R Y +L AY +G EKA +F M++ G P+ V YN +D K G
Sbjct: 207 LLDVR------AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 205 P------------------------------------QKAVEIFQRMKRDCCQPSTETYT 228
++A E F +K +P T TY
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++ ++GKA AL + EM + C + TY LV A+ R G +EA + E +
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 289 GIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGR 330
G+ P+ Y +++AY +L M GC P+ +YN ++ G+
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 105/262 (40%), Gaps = 48/262 (18%)
Query: 119 SCVSI--LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG-------- 168
+CV+ L+ A +K + E ++ PTE +Y+L+L+ Y G
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 169 ---------------------------LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L +E F +K+G P V++NS + +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A I + ++ D P TY ++++Y + + + A ++ + + KP++ +
Sbjct: 644 NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVS 703
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----------- 310
Y ++ F R GL +EA + ++ GI P ++ YN + Y +
Sbjct: 704 YNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
C P+ ++ ++VD Y RAG
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAG 785
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 50/254 (19%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G K + K + E+ P DT+ L+ AY G A ++ EM + G
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 526
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---------- 239
YN+ ++ L + G+ + + MK +P+ +Y+LM+ Y K
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 240 --------SFMALKL-----------------FNEMRSHKCKPNICTYTALVNAFAREGL 274
S+M L+ F + H KP++ + ++++ F R +
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCEPDRASY 321
++AE I E ++ G+ PD+ YN+LM+ Y + + + + +PD SY
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL--KPDLVSY 704
Query: 322 NIMVDAYGRAGLHE 335
N ++ + R GL +
Sbjct: 705 NTVIKGFCRRGLMQ 718
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 68/128 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y ++ KAE L S+ P +Y ++K +C GL+++A + EM + G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+++ G G + ++ + M ++ C+P+ T+ ++++ Y +A K A+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 245 KLFNEMRS 252
+++++
Sbjct: 792 DFVSKIKT 799
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 194 SYIDGLLKGGNPQKAVEIFQRM----KRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
S + GL G+ ++AV +F+ + + + + + + G+ S+ +A KL ++
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
+ + ++ YT +++A++R G E+A ++FE+++ G P + YN +++ + + R
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A + KA E+ C+P TY +L+ C G +E+A VFR+M K+
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + +N+ I+G K G A ++ M++ C+P+ TY ++ + SKS+ A
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L + + P+ TY LV+ F +EG A IF + AG+EPD + + AL++
Sbjct: 425 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKC 338
+ R+ G D ++ ++D + + G + C
Sbjct: 485 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 530
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P TY++L+ C +G LE+A + +EM + G PS Y I G
Sbjct: 258 EENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 317
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA+++ M C P+ TYT++I+ + K A +F +M H P I T+ AL+
Sbjct: 318 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 377
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR-MHMGCE 315
N + +EG A ++ ++ +P++ YN LME A+ L+ R + G
Sbjct: 378 NGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 437
Query: 316 PDRASYNIMVDAYGRAG 332
PDR +YNI+VD + + G
Sbjct: 438 PDRVTYNILVDGFCKEG 454
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + K F + ++++RC+ T T+ L A L +A A+ +M KYG
Sbjct: 516 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 575
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L PS V + I+G + G ++++ +RMK+ C P+ TYT++IN + A
Sbjct: 576 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 635
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M S PN TY LV A + G + A +I + G +P+ + Y+AL+ +
Sbjct: 636 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695
Query: 305 RL 306
L
Sbjct: 696 VL 697
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ C P+ TY +L+KA C G+ +KA + EM P+ Y ID L + G
Sbjct: 290 EMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREG 349
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F++M + P T+ +IN Y K A +L + M CKPNI TY
Sbjct: 350 KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN 409
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ R +A + ++ G+ PD YN L++ + +++M
Sbjct: 410 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 469
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G EPD ++ ++D + G
Sbjct: 470 GLEPDGFTFTALIDGLCKLG 489
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 46/223 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C G LE+A + M K G+ V + + IDG K G + +
Sbjct: 473 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 532
Query: 212 FQRMKRDCC-----------------------------------QPSTETYTLMINLYGK 236
F+ M + C PS T+T++I + +
Sbjct: 533 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 592
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A ++ ++LK+ M+ C PN+ TYT ++N G EEAE I + G+ P+ +
Sbjct: 593 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 652
Query: 297 YNALME----------AYRLISRM-HMGCEPDRASYNIMVDAY 328
Y L++ A++++S M GC+P+ Y+ ++ +
Sbjct: 653 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E + S KA ++D+ +P TY +L+ +C G L A +F M G
Sbjct: 411 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 470
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + + IDGL K G ++A I M + T+T +I+ + K K+
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 530
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF M ++C T+ ++A ++ EA + ++ G+ P V + L+E +
Sbjct: 531 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 590
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+++ RM GC P+ +Y I+++ G
Sbjct: 591 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 629
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 47/222 (21%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM- 215
Y ++ A C +G ++ AE ++ + G V S + + + +A +F++M
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 256
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA------- 268
K + C+P++ TY+++I+ +A + A +L EM C+P+ TYT L+ A
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 316
Query: 269 ----------------------------FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
REG EEA +F ++ G+ P + +NAL
Sbjct: 317 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376
Query: 301 ME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRA 331
+ A++L+S M G C+P+ +YN +++ R
Sbjct: 377 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 12/207 (5%)
Query: 138 AEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ F L +++ C P TY L++ C KA + R + GL P V YN +
Sbjct: 388 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 447
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K G A IF M +P T+T +I+ K + A + M
Sbjct: 448 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 507
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----YRLIS---- 308
+ T+TAL++ + G ++ +FE + + +N ++A Y+L
Sbjct: 508 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 567
Query: 309 ---RMHMGCEPDRASYNIMVDAYGRAG 332
M G P ++ I+++ + RAG
Sbjct: 568 LGKMMKYGLVPSVVTHTILIEGHCRAG 594
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 24/193 (12%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF------ 177
+L++A+ + +A ++ + C P Y+ LL + +S A A+
Sbjct: 655 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 714
Query: 178 ---------------REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
E++K G+P + YN + GL K G +A ++ Q M + P
Sbjct: 715 ARSLSSEENDNNCLSNEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 773
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+ + +I Y K K L+ + +K P+ +Y +++ EG +EA+++
Sbjct: 774 D-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 832
Query: 283 EQL-QGAGIEPDV 294
L + GIE +V
Sbjct: 833 SDLVRHTGIEEEV 845
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+ K+ +A Y ++ ++ +P+ TY++L+ +C + +EKA + EM + G P
Sbjct: 381 FESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPC 440
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
Y S I+ L K + A E+FQ ++ +C S Y +MI GK + A+ LFN
Sbjct: 441 PAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFN 500
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
EM+ C P++ Y AL++ R G+ +EA + ++ G PD+ ++N ++ +
Sbjct: 501 EMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTG 560
Query: 305 ------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ +RM + +PD SYN ++ RAG+ E
Sbjct: 561 GPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFE 598
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ A + E+ ++ PT Y +L Y G +EKA + +EM++ G
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ Y I G+ K G ++A IF M ++ C+P +INL GKA + A+
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAI 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF EM S +C PN+ TY ++ A F + EA +E+++ G+ P + Y+ L++
Sbjct: 356 KLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEG 336
+ +R+ G P A+Y +++A G+A +E
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 131 QKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
Q+ H+K Y E+ + C+P TY+ L+ A+ G + A ++F EM++ GL P+A
Sbjct: 206 QEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTA 265
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+Y + + K G +KA+ + Q MK C + TYT +I GKA K A +F
Sbjct: 266 KIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMN 325
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M CKP++ L+N + G +A ++FE+++ P+V YN ++
Sbjct: 326 MLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKA 385
Query: 302 ---EAYRLISRM-HMGCEPDRASYNIMVDAY 328
EA+ +M G P +Y+I++D +
Sbjct: 386 RASEAFLWYEKMKENGVVPSSFTYSILIDGF 416
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS-GLLEKAEAVFREMRKY 183
LI G+ A + E+ +C P TY ++KA S +A + +M++
Sbjct: 341 LINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKEN 400
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS+ Y+ IDG K +KA+ + + M P Y +IN GKA + A
Sbjct: 401 GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAA 460
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF E+R + + Y ++ + G EA ++F +++ G PDVYAYNALM
Sbjct: 461 NELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSG 520
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEG 336
EA+ L+ M GC PD S+NI+++ + R G +G
Sbjct: 521 MVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKG 564
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 100/187 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ ++ A + EL ++ + YA+++K G L +A +F EM+K G
Sbjct: 447 LINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + G+++ G +A + + M+ + C P ++ +++N + + A+
Sbjct: 507 CNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAI 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F M++ K KP++ +Y ++ +R G+ EEA ++ +++ G E D+ Y++++EA
Sbjct: 567 EMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626
Query: 305 RLISRMH 311
I H
Sbjct: 627 GKIDEDH 633
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 12/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ G+ + KA + ++ +C PT +TY ++ G EK ++ EM G
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224
Query: 185 -LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P V Y++ I K G A+ +F MK + P+ + YT ++ +Y K + A
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L L EM+ C + TYT L+ + G EEA IF + G +PDV N L+
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDA 327
+A +L M + C P+ +YN ++ A
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA 379
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
+ Y + I L + G + + Q M R C + ++ + GKA AL +F
Sbjct: 124 STTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFY 183
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAYRLI 307
+++ KCKP TY +++ +EG E+ E++ ++ G PD Y+AL+ A+ +
Sbjct: 184 QIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKL 243
Query: 308 SR 309
R
Sbjct: 244 GR 245
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A Q+ L ++A + + D R P +Y L+ A+C + L +A V+ EM + G
Sbjct: 296 LLVALAQEGLGREANQVFDRMRD-RYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENG 354
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P VV+N+ I+GLL+G +AV++F+ MK P+ TYT++I + K K MA+
Sbjct: 355 LKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAM 414
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F EM+ C+P++ TYT L+ + + + E++ G PD YNAL+
Sbjct: 415 RCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLL 474
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A R+ +M G EP +YN+M+ +Y G
Sbjct: 475 TNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGG 513
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF MR +G +N + L + G ++A ++F R
Sbjct: 256 DAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDR 315
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M RD P +YT ++ + A A +++NEM + KP++ + ++ R
Sbjct: 316 M-RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 374
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ + +M M GC+PD A+Y
Sbjct: 375 RPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTC 434
Query: 324 MVDAYGRA 331
++ YG A
Sbjct: 435 LLVGYGNA 442
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A + E+ D C P TY LL Y + +++ A+ EM +
Sbjct: 399 MLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK 458
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-M 242
G PP YN+ I L P A I+++M + +P+ TY +M+ Y +++ M
Sbjct: 459 GCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMM 518
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ EM P++ +YT +N R G EEA + E++ G++ YN
Sbjct: 519 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 46/154 (29%)
Query: 223 STETYTLMINLYGKAS---------------------------KSFM-------ALKLFN 248
+T TY M+++ GKA KSF A+ +F
Sbjct: 220 TTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFE 279
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------- 301
MR+H + ++ L+ A A+EGL EA ++F++++ PD+ +Y ALM
Sbjct: 280 MMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNAR 338
Query: 302 ---EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA R+ + M G +PD +N M++ R
Sbjct: 339 NLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRG 372
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 87 DSLPPTHATWDDLINV----------SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
D PT T++ ++NV L K D I + LI + SLH+
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E+ + + TY LL Y S ++A V EM G PS V YNS I
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G +A+E+ +M +P TYT +++ + +A K A+ +F EMR+ CK
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PNICT+ A + + G E +IF+++ G+ PD+ +N L+ E +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
M G P+R ++N ++ AY R G E
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 52/326 (15%)
Query: 28 RSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILR------FVQREVDS-- 79
R+ N ++ + R +L GK W Y LSP QQ+LR F ++DS
Sbjct: 71 RNRNRTRIGKSRDPNL-GKPWSYHG---------LSPQGQQVLRSLIEPNFDSGQLDSVL 120
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
+ +++ F P +T +L+ L +KK+D L + A+ K
Sbjct: 121 SELFEPFKDKP--ESTSSELLAFLKGLGFHKKFD----------LALRAFDWFMKQKD-- 166
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
Y +LD+ + A+++ G + A +F +++ G Y S I
Sbjct: 167 --YQSMLDNSVV------AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAF 218
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL-KLFNEMRSHKCKPN 258
G ++AV +F++M+ D C+P+ TY +++N++GK + + L +M+S P+
Sbjct: 219 ANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD 278
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLIS 308
TY L+ R L +EA ++FE+++ AG D YNAL++ Y ++++
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAGL 333
M + G P +YN ++ AY R G+
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGM 364
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ K+A E++ + P+ TY L+ AY G+L++A + +M + G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y + + G + G + A+ IF+ M+ C+P+ T+ I +YG K +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ------------------ 286
K+F+E+ P+I T+ L+ F + G+ E +F++++
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 287 -----------------GAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDR 318
AG+ PD+ YN ++ A ++++ M G C+P+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 319 ASYNIMVDAYG 329
+Y ++ AY
Sbjct: 560 LTYCSLLHAYA 570
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 46/250 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC---------------MSGL 169
++ A + + +++E E+ D RC P E TY LL AY SG+
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 170 LE--------------------KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
+E +AE F E+++ G P NS + + KA
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ MK PS TY ++ ++ +++ + ++ E+ + KP+I +Y ++ A+
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDR 318
R +A IF +++ +GI PDV YN + +Y S + GC P++
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 319 ASYNIMVDAY 328
+YN +VD Y
Sbjct: 770 NTYNSIVDGY 779
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ + + + E+ + +P +T+ L+ AY G E+A V+R M G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ + L +GG +++ ++ M+ C+P+ TY +++ Y + +
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L E+ S +P LV ++ L EAE F +L+ G PD+ N+++ Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 305 ---RLISRMH--------MGCEPDRASYNIMVDAYGRAG 332
+++++ + G P A+YN ++ + R+
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C I+ YG + + + E+ P T+ LL + +G+ + VF+E
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P +N+ I + G+ ++A+ +++RM P TY ++ +
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ K+ EM +CKPN TY +L++A+A + E++ IEP
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
L+ EA R S + G PD + N MV YGR
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L +AE + EL + P T ++ Y ++ KA V M++ G PS YN
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S + + + K+ EI + + +P +Y +I Y + ++ A ++F+EMR+
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
P++ TY + ++A + + EEA + + G P+ YN++++ Y ++R
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D L S VSI YG++ + KA + + P+ TY L+ + S K
Sbjct: 628 DITTLNSMVSI-----YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
+E + RE+ G+ P + YN+ I + + A IF M+ P TY I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y S A+ + M H C+PN TY ++V+ + + +EA+ E L+
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + F + K ++I++ GK + A +FN ++ ++ +YT+L+
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHM-GC 314
+AFA G EA +F++++ G +P + YN ++ + L+ +M G
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
PD +YN ++ R LH+
Sbjct: 276 APDAYTYNTLITCCKRGSLHQ 296
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A + KA E+ C+P TY +L+ C G +E+A VFR+M K+
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + +N+ I+G K G A ++ M++ C+P+ TY ++ + SKS+ A
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L + + P+ TY LV+ F +EG A IF + AG+EPD + + AL++
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKC 338
+ R+ G D ++ ++D + + G + C
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 464
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P TY++L+ C +G LE+A + +EM + G PS Y I G
Sbjct: 192 EESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 251
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA+++ M C P+ TYT++I+ + K A +F +M H P I T+ AL+
Sbjct: 252 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 311
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR-MHMGCE 315
N + +EG A ++ ++ +P++ YN LME A+ L+ R + G
Sbjct: 312 NGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 371
Query: 316 PDRASYNIMVDAYGRAG 332
PDR +YNI+VD + + G
Sbjct: 372 PDRVTYNILVDGFCKEG 388
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + K F + ++++RC+ T T+ L A L +A A+ +M KYG
Sbjct: 450 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 509
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L PS V + I+G + G ++++ +RMK+ C P+ TYT++IN + A
Sbjct: 510 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M S PN TY LV A + G + A +I + G +P+ + Y+AL+ +
Sbjct: 570 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629
Query: 305 RL 306
L
Sbjct: 630 VL 631
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ C P+ TY +L+KA C G+ +KA + EM P+ Y ID L + G
Sbjct: 224 EMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREG 283
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F++M + P T+ +IN Y K A +L + M CKPNI TY
Sbjct: 284 KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN 343
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ R +A + ++ G+ PD YN L++ + +++M
Sbjct: 344 ELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSA 403
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G EPD ++ ++D + G
Sbjct: 404 GLEPDGFTFTALIDGLCKLG 423
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 46/223 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C G LE+A + M K G+ V + + IDG K G + +
Sbjct: 407 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 466
Query: 212 FQRMKRDCC-----------------------------------QPSTETYTLMINLYGK 236
F+ M + C PS T+T++I + +
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A ++ ++LK+ M+ C PN+ TYT ++N G EEAE I + G+ P+ +
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 586
Query: 297 YNALME----------AYRLISRM-HMGCEPDRASYNIMVDAY 328
Y L++ A++++S M GC+P+ Y+ ++ +
Sbjct: 587 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E + S KA ++D+ +P TY +L+ +C G L A +F M G
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 404
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + + IDGL K G ++A I M + T+T +I+ + K K+
Sbjct: 405 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 464
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF M ++C T+ ++A ++ EA + ++ G+ P V + L+E +
Sbjct: 465 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 524
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+++ RM GC P+ +Y I+++ G
Sbjct: 525 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 563
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 47/222 (21%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM- 215
Y ++ A C +G ++ AE ++ + G V S + + + +A +F++M
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA------- 268
K + C+P++ TY+++I+ +A + A +L EM C+P+ TYT L+ A
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250
Query: 269 ----------------------------FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
REG EEA +F ++ G+ P + +NAL
Sbjct: 251 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 310
Query: 301 ME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRA 331
+ A++L+S M G C+P+ +YN +++ R
Sbjct: 311 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 12/207 (5%)
Query: 138 AEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ F L +++ C P TY L++ C KA + R + GL P V YN +
Sbjct: 322 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 381
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K G A IF M +P T+T +I+ K + A + M
Sbjct: 382 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 441
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----YRLIS---- 308
+ T+TAL++ + G ++ +FE + + +N ++A Y+L
Sbjct: 442 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 501
Query: 309 ---RMHMGCEPDRASYNIMVDAYGRAG 332
M G P ++ I+++ + RAG
Sbjct: 502 LGKMMKYGLVPSVVTHTILIEGHCRAG 528
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TYA+L+KA+ +G L++A + M K G P++ +Y++ + G + A +
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 641
Query: 212 FQRMKRDCCQPSTE---TYTLMINLYGKASKSFMALKLFNEMRSHKCK-PNICTYTALVN 267
D S+E L +++ + ALK+ +E++ KC P Y LV
Sbjct: 642 SSTGDLDARSLSSEENDNNCLSSHVF-RLMDVDHALKIRDEIK--KCGVPTEDLYNFLVV 698
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+EG EA+++ + + G+ PD A ++++E Y
Sbjct: 699 GLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHY 734
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LD+R + +E+ L ++ + ++ A + E++K G+P + YN + GL K G
Sbjct: 647 LDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGR 705
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A ++ Q M + P + + +I Y K K L+ + +K P+ +Y
Sbjct: 706 IIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCW 764
Query: 265 LVNAFAREGLCEEAEEIFEQL-QGAGIEPDV 294
+++ EG +EA+++ L + GIE +V
Sbjct: 765 VIHGLRNEGRVQEAQKLVSDLVRHTGIEEEV 795
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +L+ YC S + +A+ + EM + L P V Y++ + GL + G P++A+
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M P Y+++++ + K ALKL EM + KPNI YT L+
Sbjct: 432 NLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGM 491
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
G E A+E+F +L GI PD++ YN ++ EAY +M G PD
Sbjct: 492 FIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDS 551
Query: 319 ASYNIMVDAY 328
SYN+++ +
Sbjct: 552 CSYNVIIQGF 561
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 153 TEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T + Y+L L+ C ++ A +V +M K G+ P A+ +N+ I+GL G ++AV
Sbjct: 128 THNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVG 187
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M +P+ +Y +IN K + MA+++F +M ++ KPN+ TY ++++
Sbjct: 188 LFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC 247
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
++ L EA E ++ GI PDV YN ++ EA RL M PD
Sbjct: 248 KDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTV 307
Query: 320 SYNIMVDAYGRAGL-HEGKC 338
++NI+VD + G+ E +C
Sbjct: 308 TFNILVDGLCKEGMVSEARC 327
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 46/226 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C G +++A +F EM G P+ + YN+ I+GL K GN AV +
Sbjct: 164 PDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRV 223
Query: 212 FQRMKRDCCQPSTETYTLMIN---------------------------------LYGKAS 238
F++M+++ +P+ TY +I+ L+G S
Sbjct: 224 FRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCS 283
Query: 239 KSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ A +LF EM P+ T+ LV+ +EG+ EA + E + G EP+ Y
Sbjct: 284 LGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYT 343
Query: 297 YNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
YNALM+ Y L ++M GC P+ +SYNI+++ Y ++
Sbjct: 344 YNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 95/181 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + +A+ E+ + P TY+ L++ C G +A +F+EM
Sbjct: 381 ILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSS 440
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + Y+ +DG K G+ +A+++ + M +P+ YT++I A K +A
Sbjct: 441 GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVA 500
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+++ + +P+I TY ++ +EGL +EA E F +++ G PD +YN +++
Sbjct: 501 KELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQG 560
Query: 304 Y 304
+
Sbjct: 561 F 561
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 13/217 (5%)
Query: 129 YGQKSLHKKAEFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
+G SL + E T L E++ +P T+ +L+ C G++ +A V M + G
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+A YN+ +DG +A+++ M C P+ +Y ++IN Y K+ + A +L
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
+EM P+ TY+ L+ + G EA +F+++ +G+ PD+ AY+ L+
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458
Query: 302 -----EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA +L+ MH +P+ Y I++ AG
Sbjct: 459 HGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D P TY +L +C G L +A +F+EM + P V +N +DGL K G
Sbjct: 261 EMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEG 320
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A + + M +P+ TY +++ Y ++ A+K+ M C PN+ +Y
Sbjct: 321 MVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYN 380
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+N + + EA+ + ++ + PD Y+ LM EA L M
Sbjct: 381 ILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSS 440
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y+I++D + + G
Sbjct: 441 GLLPDLMAYSILLDGFCKHG 460
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Q ++A + E+ S +P Y++LL +C G L++A + +EM +
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y I G+ G + A E+F ++ D +P TY +MI K S A
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F +M P+ C+Y ++ F + A ++ +++ G D + L++
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLE 596
Query: 305 ---RLISRMHMG 313
+ISR G
Sbjct: 597 SHDEIISRFMRG 608
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A F M + PS V + ++ + K AV + +M + + +
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + S A+ + +M +P+ T+ L+N EG +EA +F ++ +G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 290 IEPDVYAYNALME----------AYRLISRMHMG-CEPDRASYNIMVDA 327
EP+V +YN ++ A R+ +M +P+ +YN ++D+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDS 245
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C PT TY L+ +Y + L A VF +M+K G P V Y + ID K G
Sbjct: 363 QMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAG 422
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E++QRM+ P T TY++MIN GKA A KLF EM C PN+ TY
Sbjct: 423 FLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYN 482
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
++ A+ + A +++ +Q AG EPD Y+ +M EA + S M
Sbjct: 483 IMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRK 542
Query: 313 GCEPDRASYNIMVDAYGRAG------------LHEGKC 338
PD Y ++VD +G+AG LH G C
Sbjct: 543 NWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLC 580
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 23/288 (7%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPP------THATWDDLINVSVQ-LRLNKKWDPIVLM 118
A Q+L+ +Q + + LP T+ T ++ + Q + +NK D +V
Sbjct: 308 ANQVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRD 367
Query: 119 SCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
C + LI +YG+ + A + ++ + C P TY L+ + +G L A
Sbjct: 368 GCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFA 427
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+++ M+ GL P Y+ I+ L K G+ A ++F M C P+ TY +MI L
Sbjct: 428 MEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIAL 487
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
KA ALKL+ +M++ +P+ TY+ ++ G +EAE IF +++ PD
Sbjct: 488 QAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPD 547
Query: 294 VYAYNALMEAYRLI-----------SRMHMGCEPDRASYNIMVDAYGR 330
Y L++ + + +H G P+ + N ++ A+ R
Sbjct: 548 EPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLR 595
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 109/216 (50%), Gaps = 14/216 (6%)
Query: 134 LHKKAEF------TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
+H KA F Y + + P TY++++ +G L A+ +F EM + G P
Sbjct: 417 IHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVP 476
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ V YN I K N Q A+++++ M+ +P TY++++ + G + A +F
Sbjct: 477 NLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIF 536
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI 307
+EM+ P+ Y LV+ + + G E+A E ++ + AG+ P+V N+L+ A+ +
Sbjct: 537 SEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRV 596
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+R+ PD +YN++ + GL+ +Y+L+
Sbjct: 597 NRL-----PD--AYNLL-QSMLNLGLNPSLQTYTLL 624
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A+ + E+++ C+P TY +++ + + A ++R+M+
Sbjct: 448 VMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNA 507
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G +A IF MKR P Y L+++L+GKA A
Sbjct: 508 GFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKA 567
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+ + M PN+ T +L++AF R +A + + + G+ P + Y L+
Sbjct: 568 WEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSC 627
Query: 303 AYRLISRMHMGC 314
S MGC
Sbjct: 628 CTEARSPYDMGC 639
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
Query: 226 TYTLMINLYGKASKSFMAL-KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TYT M+ + G+A K F+A+ KL ++M C+P + TY L++++ R +A E+F Q
Sbjct: 340 TYTTMVGILGRA-KQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQ 398
Query: 285 LQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+Q AG EPD Y L++ A + RM G PD +Y++M++ G+AG
Sbjct: 399 MQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAG 457
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 78/205 (38%), Gaps = 35/205 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G +AE + E+ +P E Y LL+ + +G +EKA ++ M
Sbjct: 518 IVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHA 577
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----------- 232
GL P+ NS + L+ A + Q M PS +TYTL+++
Sbjct: 578 GLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDM 637
Query: 233 --------LYGKASKSFMAL----------------KLFNEMRSHKCKPNICTYTALVNA 268
+ G + F++ K + M S + A+V+
Sbjct: 638 GCYCELMSVTGHPAHMFLSSLPSAGPDGQNVRHHVSKFLDMMHSEDRESKRGLVDAVVDF 697
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPD 293
+ GL EEA ++E + PD
Sbjct: 698 LHKSGLKEEAGSVWEIAAQRNVYPD 722
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P TY+ L+ +CM L++A+ +F M
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ I+G K + VE+F+ M + +T TYT +I+ + +A A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+F +M S PNI TY L++ + G E+A +FE LQ + +EP +Y YN ++E
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +PD YN M+ + R GL E
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ + P T+ L+ A+ G L +AE ++ EM K + P Y+S I+G
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A +F+ M C P+ TY +IN + KA + ++LF EM N TYT
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRM 310
L++ F + C+ A+ +F+Q+ G+ P++ YN L++ + + R
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHEGK----CSYSL 342
M EP +YNIM++ +AG E CS SL
Sbjct: 500 KM--EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 109/212 (51%), Gaps = 14/212 (6%)
Query: 134 LHKKA-EFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
LH KA E L ++ C P TY +++ C G ++ A + +M + + V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y++ ID L K + A+ +F M+ +P+ TY+ +I+ + A +L ++M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RL 306
K PN+ T+ AL++AF +EG EAE++++++ I+PD++ Y++L+ + RL
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 307 ISRMHM-------GCEPDRASYNIMVDAYGRA 331
HM C P+ +YN +++ + +A
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T + LL YC + A A+ +M + G P + + + I GL +AV +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + CQP+ TY +++N K +A L N+M + K + N+ Y+ ++++ +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F +++ G+ P+V Y++L+ +A RL+S M P+ +
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 321 YNIMVDAYGRAG 332
+N ++DA+ + G
Sbjct: 333 FNALIDAFVKEG 344
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + + + A+ VF++M G+ P+ + YN+ +DGL K G +KA+ +F+ +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P+ TY +MI KA K LF + KP++ Y +++ F R+GL
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 276 EEAEEIFEQLQGAGIEPD 293
EEA+ +F +++ G PD
Sbjct: 557 EEADALFRKMREDGPLPD 574
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ ++ + C + A +F EM G+ P+ + Y+S I L A + M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T+ +I+ + K K A KL++EM P+I TY++L+N F +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
EA+ +FE + P+V YN L+ + R+ G E
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +L+ S L+ A +F M K PS +N + + K + + ++M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R + TY ++IN + + S+ +AL L +M +P+I T ++L+N +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
+A + +Q+ G PD + L+ EA L+ RM GC+P+ +Y ++V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 326 DAYGRAG 332
+ + G
Sbjct: 233 NGLCKRG 239
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ SR +P+ + LL A + ++ +M++ G+ + YN I+ +
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+ + +M + +PS T + ++N Y + A+ L ++M +P+ T+T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG- 313
L++ EA + +++ G +P++ Y ++ A+ L+++M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 314 CEPDRASYNIMVDA 327
E + Y+ ++D+
Sbjct: 256 IEANVVIYSTVIDS 269
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+ K+ +A Y ++ ++ +P+ TY++L+ +C + +EKA + EM + G P
Sbjct: 381 FESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPC 440
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
Y S I+ L K + A E+FQ ++ +C S Y +MI GK + A+ LFN
Sbjct: 441 PAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFN 500
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
EM+ C P++ Y AL++ R G+ +EA + ++ G PD+ ++N ++ +
Sbjct: 501 EMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTG 560
Query: 305 ------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ +RM + +PD SYN ++ RAG+ E
Sbjct: 561 GPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFE 598
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ A + E+ ++ PT Y +L Y G +EKA + +EM++ G
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ Y I G+ K G ++A IF M ++ C+P +INL GKA + A+
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAI 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF EM S +C PN+ TY ++ A F + EA +E+++ G+ P + Y+ L++
Sbjct: 356 KLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEG 336
+ +R+ G P A+Y +++A G+A +E
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 131 QKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
Q+ H+K Y E+ + C+P TY+ L+ A+ G + A ++F EM++ GL P+A
Sbjct: 206 QEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTA 265
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+Y + + K G +KA+ + Q MK C + TYT +I GKA K A +F
Sbjct: 266 KIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMN 325
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M CKP++ L+N + G +A ++FE+++ P+V YN ++
Sbjct: 326 MLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKA 385
Query: 302 ---EAYRLISRM-HMGCEPDRASYNIMVDAY 328
EA+ +M G P +Y+I++D +
Sbjct: 386 RASEAFLWYEKMKENGVVPSSFTYSILIDGF 416
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS-GLLEKAEAVFREMRKY 183
LI G+ A + E+ +C P TY ++KA S +A + +M++
Sbjct: 341 LINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKEN 400
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS+ Y+ IDG K +KA+ + + M P Y +IN GKA + A
Sbjct: 401 GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAA 460
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF E+R + + Y ++ + G EA ++F +++ G PDVYAYNALM
Sbjct: 461 NELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSG 520
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEG 336
EA+ L+ M GC PD S+NI+++ + R G +G
Sbjct: 521 MVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKG 564
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 100/187 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ ++ A + EL ++ + YA+++K G L +A +F EM+K G
Sbjct: 447 LINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + G+++ G +A + + M+ + C P ++ +++N + + A+
Sbjct: 507 CNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAI 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F M++ K KP++ +Y ++ +R G+ EEA ++ +++ G E D+ Y++++EA
Sbjct: 567 EMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626
Query: 305 RLISRMH 311
I H
Sbjct: 627 GKIDEDH 633
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 12/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ G+ + KA + ++ +C PT +TY ++ G EK ++ EM G
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224
Query: 185 -LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P V Y++ I K G A+ +F MK + P+ + YT ++ +Y K + A
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L L EM+ C + TYT L+ + G EEA IF + G +PDV N L+
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDA 327
+A +L M + C P+ +YN ++ A
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA 379
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
+ Y + I L + G + + Q M R C + ++ + GKA AL +F
Sbjct: 124 STTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFY 183
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAYRLI 307
+++ KCKP TY +++ +EG E+ E++ ++ G PD Y+AL+ A+ +
Sbjct: 184 QIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKL 243
Query: 308 SR 309
R
Sbjct: 244 GR 245
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 47/246 (19%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+I++ SL K + Y +L+ PT TY LL SG LE+A+ +F EM
Sbjct: 864 NIIIANLVKSNSLDKALDLFY-DLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMV 922
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT------------- 228
YG P+ +YN I+G K G+ A E+F+RM R+ +P ++YT
Sbjct: 923 DYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVD 982
Query: 229 ----------------------LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
LMI+ G++ + AL L++EM+S P++ TY +L+
Sbjct: 983 DALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCE 315
G+ E+A +++E+LQ G+EP+V+ YNAL+ AY + RM + GC
Sbjct: 1043 LNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCS 1102
Query: 316 PDRASY 321
P+ ++
Sbjct: 1103 PNTGTF 1108
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 131 QKSLHKKAEFTYLELLD--SRC------------------IPTEDTYALLLKAYCMSGLL 170
+ S HK TY+ +LD S C P T+ +L+ A C +G +
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
++A + MRK G+ P+ YN+ I GLL+ A+++F M+ P+ TY L
Sbjct: 386 DEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILF 445
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ YGK+ +S AL+ F +M+ PNI A + + A G EA+ IF +L+ G+
Sbjct: 446 IDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGL 505
Query: 291 EPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
PD YN +M EA L+S M CEPD N +++ +AG
Sbjct: 506 APDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++A+G+ + Y +++ S C P T+ +++ S L+KA +F ++
Sbjct: 830 LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ Y +DGLLK G ++A E+F+ M C+P+ Y ++IN +GK A
Sbjct: 890 DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF M +P++ +YT+LV G ++A FE+L+ G+ D AYN ++
Sbjct: 950 CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG 1009
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
EA L M G PD +YN ++ G AG+ E
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVE 1052
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PT TY L + Y SG +KA F +M+ G+ P+ V N+ + L + G ++A
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF R+K + P + TY +M+ Y KA + A++L ++M ++C+P+I +L+N
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRA 319
+ G +EA ++F +L+ + P V YN L+ A L + M GC P+
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615
Query: 320 SYNIMVD 326
++N ++D
Sbjct: 616 TFNTILD 622
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LIE + + A + E+ ++ C P TY LLL A+ SG + + ++ +M
Sbjct: 795 FLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICS 854
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ + +N I L+K + KA+++F + P+ TY +++ K+ + A
Sbjct: 855 SCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEA 914
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF EM + C+PN Y L+N F + G A E+F+++ GI PD+ +Y +L+
Sbjct: 915 KELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGC 974
Query: 302 --EAYRLISRMH-------MGCEPDRASYNIMVDAYGRA 331
EA R+ +H G D +YN+M+D GR+
Sbjct: 975 LCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRS 1013
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+TY ++ K + G L + F +MR+ G +A YN I LL+ G ++A+E+++R
Sbjct: 160 NTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRR 219
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + +PS +T++ ++ GK + L EM S KPNI TYT + R G
Sbjct: 220 MVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGR 279
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNI 323
+EA I ++++ G PDV Y L++A ++ E PDR +Y
Sbjct: 280 IDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYIT 339
Query: 324 MVDAYGRAG 332
M+D + G
Sbjct: 340 MLDKFSDCG 348
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + ++ +G +++A + + M G P V Y ID L G A+E+
Sbjct: 262 PNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMEL 321
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +MK +P TY M++ + + ++EM + P++ T+T LVNA +
Sbjct: 322 FVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCK 381
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
G +EA + + ++ G+ P+++ YN L+ ++R+ +G P +
Sbjct: 382 AGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYT 441
Query: 321 YNIMVDAYGRAG 332
Y + +D YG++G
Sbjct: 442 YILFIDFYGKSG 453
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT ++Y L++ + E A +F EM+ G P YN +D K G + E+
Sbjct: 788 PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M C+P+T T+ ++I K++ AL LF ++ S P CTY L++ +
Sbjct: 848 YEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLK 907
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
G EEA+E+FE++ G P+ YN L+ + ++ CE PD S
Sbjct: 908 SGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKS 967
Query: 321 YNIMVDAYGRAG 332
Y +V AG
Sbjct: 968 YTSLVGCLCEAG 979
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 160 LLKAYCMSGLLEKAEAVF-REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
++K C A++VF R ++ G+ P+ YN I+G L N + A +F MK
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
C P TY L+++ +GK+ K +L+ +M CKPN T+ ++ + ++A
Sbjct: 820 GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
++F L P Y L+ EA L M GC P+ A YNI+++
Sbjct: 880 LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING 939
Query: 328 YGRAG 332
+G+ G
Sbjct: 940 FGKTG 944
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 46/232 (19%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P TY +L+ A C +G L+ A +F +M+ P V Y + +D G+
Sbjct: 292 DDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLG 351
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+ E + M+ D P T+T+++N KA A L + MR PN+ TY L+
Sbjct: 352 RVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411
Query: 267 NA-----------------------------------FAREGLCEEAEEIFEQLQGAGIE 291
+ + + G ++A E FE+++ GI
Sbjct: 412 SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471
Query: 292 PDVYAYNA----------LMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
P++ A NA L EA + +R+ G PD +YN+M+ Y +AG
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAG 523
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q L ++A Y ++ P+ T++ L+ A E +++ EM G
Sbjct: 200 LIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLG 259
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ Y I L + G +A I +RM+ D C P TYT++I+ A K A+
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF +M++ KP+ TY +++ F+ G +E + +++ G PDV + L+
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
EA+ L+ M G P+ +YN ++ R
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ + L + P TY +++K Y +G +++A + +M + P +V NS
Sbjct: 491 REAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSL 550
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+ L K G +A ++F R+K P+ TY +I GK + A++LF M + C
Sbjct: 551 INTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGC 610
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ +++ + + A ++ ++ PDV +N ++ +A
Sbjct: 611 PPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIW 670
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L +M PD + ++ + GL E
Sbjct: 671 LFHQMKKMLTPDCVTLCTLLPGVVKNGLME 700
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I+ G+ ++A Y E+ P TY L+ ++G++E+A ++ E++
Sbjct: 1005 LMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI 1064
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ YN+ I G GN A +++RM C P+T T+ + N
Sbjct: 1065 GLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L++ S +E+A ++ EM+ G+ P YNS I L G ++A ++++ ++
Sbjct: 1003 YNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ 1062
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+P+ TY +I Y + S A ++ M C PN T+ L N
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 209 VEIFQRMKRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
V +F M+ + TY ++ + G ++ A F +MR N +Y L
Sbjct: 144 VVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFA---FGKMREAGFHLNAYSYNGL 200
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGC 314
++ + GLC EA E++ ++ G++P + ++ALM A L+ M +G
Sbjct: 201 IHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGL 260
Query: 315 EPDRASYNIMVDAYGRAGLHEGKC 338
+P+ +Y I + GRAG + C
Sbjct: 261 KPNIYTYTICIRVLGRAGRIDEAC 284
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 12/214 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S CIP TY L+ +C S + A VF ++ G P V Y+ IDGL K G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199
Query: 204 NPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A+++F RM K C P+T TY +I+ + + K A+ L M P++ TY
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------ 312
T L+N F + ++A ++ Q+ G+ PDV + +LM+ RL +H+
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319
Query: 313 -GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
C P +YN ++D Y RA E + L E+
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ A C+ L +A EM L P+ V Y IDGL KGG +AV +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M++ C P+ TY +I+ KA ++ A L EM C P+I TYT L+ F +
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--HMGCEPDRA 319
++A +FEQL G PDV Y+ L+ EA L RM C P+
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222
Query: 320 SYNIMVDAYGRAG 332
+YN ++ + R G
Sbjct: 223 TYNSLISGFCRMG 235
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+ LH+ +F E+ + P TY +L+ C G +++A A+ +MRK + P+AV
Sbjct: 59 ENRLHEARKFLE-EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAV 116
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YNS I GL K +A ++ + M C P TYT +I + K+ KS AL++F ++
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALM-------- 301
+ +P++ TY+ L++ +EG +EA ++F ++ +G P+ YN+L+
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAY 328
EA L+ RM G PD +Y +++ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C L+ A + +M + GL P V + S +DGL + AV I
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKA-----SKSFM------------------------ 242
M+R C P+ TY +++ Y +A ++ FM
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373
Query: 243 ----ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ-LQGAGIEPDVYAY 297
A++L E R +C P++ YT +++ RE +EA ++ + L+ G P+ Y
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Query: 298 NALMEAY-------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ L+ R + GC P+ +YN+++DA+ +A E
Sbjct: 434 STLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDE 478
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ C LE+A +M G P Y + I L +A + + M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TYT++I+ K + A+ L ++MR KC P TY +L++ +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERA 131
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
EA ++ E++ +G PD++ Y L+ + +L++R G PD +Y
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR---GFRPDVVTY 188
Query: 322 NIMVDAYGRAG 332
+ ++D + G
Sbjct: 189 SCLIDGLCKEG 199
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
V Y S I GL K ++A+ +M P TYT +I+ ++ A K E
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M + PN+ TYT L++ + G +EA + +++ + P YN+L+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EAY L+ M + GC PD +Y ++ + ++
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKS 163
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y + + ++A LE +D C P ++ ++++ C +A + E R+
Sbjct: 332 ILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 389
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMA 243
P V+Y + IDGL + +A ++++M + C P++ TY+ ++ A
Sbjct: 390 CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG----- 444
Query: 244 LKLFNEMRSH---KCKPNICTYTALVNAFAREGLCEEAEEIFEQL--QGAGI 290
+ + R + C PNI TY L++AF + E+A E+ + + +G G+
Sbjct: 445 --MLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGV 494
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C TYT +I K + AL +M S P++ TYTA+++A E EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVDAYG 329
+ E++ + P+V Y L+ EA L+S+M C P +YN ++
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLC 126
Query: 330 RA 331
+A
Sbjct: 127 KA 128
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ C + TYT+L+ + E+A ++ G PDVY Y A++ A + +R+H
Sbjct: 4 TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63
Query: 312 -----------MGCEPDRASYNIMVDAYGRAG 332
P+ +Y +++D + G
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGG 95
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 12/214 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S CIP TY L+ +C S + A VF ++ G P V Y+ IDGL K G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199
Query: 204 NPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A+++F RM K C P+T TY +I+ + + K A+ L M P++ TY
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------ 312
T L+N F + ++A ++ Q+ G+ PDV + +LM+ RL +H+
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319
Query: 313 -GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
C P +YN ++D Y RA E + L E+
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ A C+ L +A EM L P+ V Y IDGL KGG +AV +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M++ C P+ TY +I+ KA ++ A L EM C P+I TYT L+ F +
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--HMGCEPDRA 319
++A +FEQL G PDV Y+ L+ EA L RM C P+
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222
Query: 320 SYNIMVDAYGRAG 332
+YN ++ + R G
Sbjct: 223 TYNSLISGFCRMG 235
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+ LH+ +F E+ + P TY +L+ C G +++A A+ +MRK + P+AV
Sbjct: 59 ENRLHEARKFLE-EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAV 116
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YNS I GL K +A ++ + M C P TYT +I + K+ KS AL++F ++
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALM-------- 301
+ +P++ TY+ L++ +EG +EA ++F ++ +G P+ YN+L+
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAY 328
EA L+ RM G PD +Y +++ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C L+ A + +M + GL P V + S +DGL + AV I
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKA-----SKSFM------------------------ 242
M+R C P+ TY +++ Y +A ++ FM
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373
Query: 243 ----ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ-LQGAGIEPDVYAY 297
A++L E R +C P++ YT +++ RE +EA ++ + L+ G P+ Y
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Query: 298 NALMEAY-------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ L+ R + GC P+ +YN+++DA+ +A E
Sbjct: 434 STLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDE 478
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ C LE+A +M G P Y + I L +A + + M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TYT++I+ K + A+ L ++MR KC P TY +L++ +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERA 131
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
EA ++ E++ +G PD++ Y L+ + +L++R G PD +Y
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR---GFRPDVVTY 188
Query: 322 NIMVDAYGRAG 332
+ ++D + G
Sbjct: 189 SCLIDGLCKEG 199
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
V Y S I GL K ++A+ +M P TYT +I+ ++ A K E
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M + PN+ TYT L++ + G +EA + +++ + P YN+L+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EAY L+ M + GC PD +Y ++ + ++
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKS 163
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y + + ++A LE +D C P ++ ++++ C +A + E R+
Sbjct: 332 ILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 389
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMA 243
P V+Y + IDGL + +A ++++M + C P++ TY+ +I A
Sbjct: 390 CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAG----- 444
Query: 244 LKLFNEMRSH---KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ + R + C PNI TY L++AF + E+A E+ + + G
Sbjct: 445 --MLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C TYT +I K + AL +M S P++ TYTA+++A E EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVDAYG 329
+ E++ + P+V Y L+ EA L+S+M C P +YN ++
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLC 126
Query: 330 RA 331
+A
Sbjct: 127 KA 128
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ C + TYT+L+ + E+A ++ G PDVY Y A++ A + +R+H
Sbjct: 4 TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63
Query: 312 -----------MGCEPDRASYNIMVDAYGRAG 332
P+ +Y +++D + G
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGG 95
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P+ TY+ L+ +CM L++A+ +F M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I G K ++ +E+F+ M + +T TY ++I +A MA
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
++F EM S PNI TY L++ + G E+A +FE LQ + +EP +Y YN ++E
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +PD +YN M+ + R G E
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L++ +G + A+ +F+EM G+PP+ + YN+ +DGL K G +KA+ +F+ +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P+ TY +MI KA K LF + KP++ Y +++ F R+G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EEA+ +F++++ G P+ YN L+ A
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 31/229 (13%)
Query: 134 LHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
LH KA + L+D C P TY +++ C G + A + +M + L P
Sbjct: 198 LHNKAS-EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKL 246
++YN+ IDGL K + A+ +F+ M+ +P+ TY+ +I+ YG+ S A +L
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD---ASRL 313
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
++M K P++ T++AL++AF +EG EAE++++++ I+P + Y++L+ + +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 307 ISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
R+ C PD +YN ++ +G C Y VE
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLI---------KGFCKYKRVE 413
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ + P T++ L+ A+ G L +AE ++ EM K + PS V Y+S I+G
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F+ M C P TY +I + K + +++F EM N TY
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRM 310
L+ + G C+ A+EIF+++ G+ P++ YN L++ + + R
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
M EP +YNIM++ +AG
Sbjct: 496 KM--EPTIYTYNIMIEGMCKAG 515
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC S + +A A+ +M G P+ V +N+ I GL +A+ +
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM CQP TY +++N K + +A L N+M K +P + Y +++ +
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F++++ GI P+V Y++L+ +A RL+S M PD +
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 329 FSALIDAFVKEG 340
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ C ++ A +F+EM G+ P+ V Y+S I L G A +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P T++ +I+ + K K A KL++EM P+I TY++L+N F
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR-----------AS 320
+EA+++FE + PDV YN L++ + R+ G E R +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 321 YNIMVDAYGRAG 332
YNI++ +AG
Sbjct: 434 YNILIQGLFQAG 445
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Q A+ + E++ P TY LL C +G LEKA VF +++
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ YN I+G+ K G + ++F + +P Y MI+ + + A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF EM+ PN Y L+ A R+G E + E+ ++++ G D
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A A+F EM K PS + ++ + + K + + ++M+ + TY++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL + +M +PNI T ++L+N + EA + +Q+ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+P+ +N L+ EA LI RM GC+PD +Y ++V+ + G
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR P+ ++ LL A + ++ +M+ G+P + Y+ I+ +
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P+ T + ++N Y + + A+ L ++M +PN T+
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +++ G +PD+ Y ++ A+ L+++M G
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 314 -CEPDRASYNIMVDA 327
EP YN ++D
Sbjct: 251 KLEPGVLIYNTIIDG 265
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 33/180 (18%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
D +PP T++ L++ L N K + +++ Y Q+S + +TY ++
Sbjct: 460 DGVPPNIMTYNTLLD---GLCKNGKLE--------KAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 147 DSRCI--------------------PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
+ C P Y ++ +C G E+A+A+F+EM++ G
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
P++ YN+ I L+ G+ + + E+ + M+ T L+ N+ G+ KSF+ +
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 628
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A + E+ + +Y +L+ C G L+ A +F MR+ G+ PS V +N
Sbjct: 125 KSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLL 184
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
IDG K G A+ F +MK QPS TY +I + +A A++ F++M+ +
Sbjct: 185 IDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRL 244
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----- 310
P TYT L+ AFA+E + A E+ +++ AG+E DV +Y L+ A + +M
Sbjct: 245 APTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARK 304
Query: 311 ------HMGCEPDRASYNIMVDAYGRAG 332
G +P+ Y++M+ YGR G
Sbjct: 305 LFQSMDSKGVKPNNVLYDMMIYGYGREG 332
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T+ LL+ Y +G + A F +M+ GL PS V YN I G + + A+
Sbjct: 176 PSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRA 235
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK P+ TYT++I + K ++ A ++ +EM + ++ +Y L++A
Sbjct: 236 FSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCM 295
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
EG A ++F+ + G++P+ Y+ ++ Y RLI M G P+ AS
Sbjct: 296 EGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVAS 355
Query: 321 YNIMVDAYGRAGLHEGKC 338
Y + + R +EGKC
Sbjct: 356 YCLTI----RLLCNEGKC 369
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ ++ + R PT+ TY +L+ A+ +++A + EM K GL Y + L
Sbjct: 235 AFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALC 294
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G A ++FQ M +P+ Y +MI YG+ S+ AL+L EMR PN+
Sbjct: 295 MEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVA 354
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
+Y + EG C+EAE + ++ AG++ L +A +R+H
Sbjct: 355 SYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDAK---ARLH 402
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ C SG + +A VF M + G+ P+ V Y + I G G + + M+R
Sbjct: 44 LVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGG 103
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P+ TY ++ + + + A LF+EM N+ +Y L+ R G ++A
Sbjct: 104 VEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAA 163
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRASYNIMVDAY 328
++FE ++ GI P + +N L++ Y ++ + +H G +P +YN ++ +
Sbjct: 164 QLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGF 223
Query: 329 GRA 331
RA
Sbjct: 224 CRA 226
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ Y + G E A+ EMR+ G+ P+ YN + + G + A +
Sbjct: 71 PNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLL 130
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + +Y ++I + K A +LF MR P++ T+ L++ + +
Sbjct: 131 FDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGK 190
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G A F Q++ AG++P V YN L+ A R S M P + +
Sbjct: 191 AGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVT 250
Query: 321 YNIMVDAYGR 330
Y I++ A+ +
Sbjct: 251 YTILIGAFAK 260
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Query: 88 SLPPTHATWDDLI-------NVSVQLRL--NKKWDPIVLMSCVSILLIEAYGQKSLHKKA 138
L P+ T+++LI +++ +R + K + +LI A+ +++ +A
Sbjct: 208 GLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRA 267
Query: 139 EFTYLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
F L ++ + + +Y +LL A CM G + A +F+ M G+ P+ V+Y+ I
Sbjct: 268 -FEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIY 326
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + G+ KA+ + M++ P+ +Y L I L K A L +M +
Sbjct: 327 GYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQT 386
Query: 258 NICTYTALVNAFAR 271
+ L +A AR
Sbjct: 387 SESICRVLFDAKAR 400
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----- 312
++ TALV+ + G EA +F+ + G+ P+ Y AL+ Y + + M
Sbjct: 37 DVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALV 96
Query: 313 ------GCEPDRASYNIMVDAYGRAG 332
G EP+ +YN +V + R G
Sbjct: 97 GEMRRGGVEPNLYTYNCLVGEWCRTG 122
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 22/221 (9%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL K+ E L P T ++ + +C ++ +V ++ K GL P+ V +
Sbjct: 114 SLSKQMELVGLS-------PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTF 166
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ I+GL K G +AVE+F M CQP TY +IN K ++ A L +M
Sbjct: 167 TTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEE 226
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
C+PN+ TY+ L+++ R+ L EA +IF ++ GI PD++ Y +L+ E
Sbjct: 227 AGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKE 286
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
A L++ M + PD ++N++VD + + EGK S +L
Sbjct: 287 ASALLNEMTSLNIMPDIVTFNVLVDTFCK----EGKVSEAL 323
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 134 LHKKAEFTY-LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L K EF +EL D C P TY ++ C G A + ++M + G P+
Sbjct: 173 LCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPN 232
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V Y++ ID L + +A++IF MK P TYT +I K S+ A L N
Sbjct: 233 MVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLN 292
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
EM S P+I T+ LV+ F +EG EA + + + G+EP+V Y++LM Y L +
Sbjct: 293 EMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT 352
Query: 309 RM-------HM----GCEPDRASYNIMVDAYGRA 331
+ H+ GC+P+ SYNI+++ Y +A
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 20/265 (7%)
Query: 91 PTHATWDDLINVSVQLRL-NKKWDPIVLMSCVSIL--------LIEAYGQKSLHKKAEFT 141
P T+ LI+ + RL N+ D M I LI+ + S K+A
Sbjct: 231 PNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASAL 290
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
E+ +P T+ +L+ +C G + +A V + M + G+ P+ V Y+S + G
Sbjct: 291 LNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSL 350
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ +A ++F M C+P+ +Y ++IN Y KA + A++LFNEM PN +
Sbjct: 351 WTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVS 410
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y L++ F + G EA+++F + G PD++ Y+ L++ A+RL M
Sbjct: 411 YNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQ 470
Query: 312 MG-CEPDRASYNIMVDAYGRAGLHE 335
+P+ Y I+V A ++G H+
Sbjct: 471 STYLKPNLVMYTILVHAMCKSGNHK 495
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C P +Y +L+ YC + +++A +F EM GL P+ V YN+ I G + G
Sbjct: 364 MITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK 423
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A ++F+ M + P TY+++++ + K A +LF M+S KPN+ YT
Sbjct: 424 LREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTI 483
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-G 313
LV+A + G ++A ++F +L G++P V Y ++ EA M G
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543
Query: 314 CEPDRASYNIMV 325
C PD SYN+++
Sbjct: 544 CPPDEISYNVII 555
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 77 VDSNTIWDAFDSLPPTHATWDDLINVS--VQLRLNKKWDPIVLMSCVSILLIEAYGQKSL 134
V+ N + + SL ++ W D++ + + K P + + LI Y +
Sbjct: 334 VEPNVV--TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI---LINGYCKAKR 388
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A + E++ P +Y L+ +C G L +A+ +FR M G P Y+
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSI 448
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+DG K G KA +F+ M+ +P+ YT++++ K+ A KLF+E+
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+P++ YT ++N +EGL +EA E F ++ G PD +YN ++
Sbjct: 509 LQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG 557
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + Q ++A+ + + + +P TY++LL +C G L KA +FR M+
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V+Y + + K GN + A ++F + QP + YT +IN K AL
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 533
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ F M + C P+ +Y ++ + A + +++ G DV
Sbjct: 534 EAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 9/172 (5%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVS---------ILLIEAYGQKSLHKKAE 139
L P + +++ LI+ QL ++ + C + +L++ + ++ KA
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAF 463
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ + + P Y +L+ A C SG + A +F E+ GL P +Y + I+GL
Sbjct: 464 RLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGL 523
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
K G +A+E F+ M+ D C P +Y ++I + AL L EMR
Sbjct: 524 CKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMR 575
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 31/233 (13%)
Query: 131 QKSLHKKAEFTYLELLD--SRC------------------IPTEDTYALLLKAYCMSGLL 170
+ S HK + TY+ LLD S C P T+ +L+ A C +G +
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+A + MRK G+ P+ YN+ I GLL+ A+++F M+ +P+ TY L+
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ +GK+ AL+ F +M++ PNI A + + A G EA+ +F +L+ +G+
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL 505
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
PD YN +M EA +L+S M + CEPD N ++D +AG
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAG 558
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+G+ + Y E+L C P TY +++ S L+KA ++ +
Sbjct: 831 LIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGD 890
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ + IDGLLK G A E+F M C+P++ Y +++N YGK A
Sbjct: 891 FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTAC 950
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F M +P++ +YT LV+ G ++A FE+L+ AG++PD+ AYN ++
Sbjct: 951 EFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA L M + G PD +YN ++ G G+ E
Sbjct: 1011 GRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIE 1052
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 11/210 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA Y L+ PT T+ L+ SG L+ A +F M YG P++ +YN +
Sbjct: 878 KAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+G K G+ A E F+RM ++ +P ++YT+++++ A + AL F +++
Sbjct: 938 NGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P++ Y ++N R EEA +F ++Q GI PD+Y YN+L+ EA ++
Sbjct: 998 PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
+ +G +P+ +YN ++ Y +G E
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSE 1087
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y +L+ Y G ++ A F+ M K G+ P Y +D L G A+
Sbjct: 926 CRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDAL 985
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+++K+ P Y LMIN G++ ++ AL LF+EM++ P++ TY +L+
Sbjct: 986 HYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNL 1045
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDR 318
G+ EEA +I+E+LQ G++P+V+ YNAL+ Y L + GC+P+
Sbjct: 1046 GIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNT 1105
Query: 319 ASY 321
++
Sbjct: 1106 GTF 1108
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 19/230 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL-LLKAYCMSGLLEKAEAVFREMRK 182
+L EA +K++ + E L R I +D+ + ++K C A VF + K
Sbjct: 729 ILTEAGTEKAI------LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTK 782
Query: 183 -YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P+ VYN IDG L+ N + A +F+ MK C P T TY +I+ +GK+ K
Sbjct: 783 ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKIN 842
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L++EM + CKPN TY +++ + ++A +++ L P + L+
Sbjct: 843 ELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLI 902
Query: 302 ----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+A+ + M H GC P+ A YNI+V+ YG+ G + C +
Sbjct: 903 DGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEF 952
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
DTY ++ K+ + G L +A + +MR+ G +A YN I LL+ G ++A+E+++R
Sbjct: 160 DTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRR 219
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + +PS +T++ ++ GK + L EM S +PNI TYT + R+G
Sbjct: 220 MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGK 279
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMGC-EPDRASYNI 323
+EA I +++ G PDV Y L++A L ++M +PD+ +Y
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339
Query: 324 MVDAYGRAGLHEGKCSYSLVELSVKHY 350
++D + G H K E+ Y
Sbjct: 340 LLDKFSDCG-HLDKVEKIWTEMEADGY 365
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y LL+ + +E A +F EM+ G P YNS ID K G + ++
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C+P+T TY ++I+ K+++ A+ L+ + S P CT+ L++ +
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
G ++A E+F+ + G P+ YN L+ Y + + CE PD S
Sbjct: 908 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKS 967
Query: 321 YNIMVDAYGRAG 332
Y I+VD AG
Sbjct: 968 YTILVDILCIAG 979
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ + + + A + E+ + C P TY L+ A+ SG + + ++ EM
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR 854
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + YN I L+K KA++++ + P+ T+ +I+ K+ + A
Sbjct: 855 GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA 914
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
++F+ M + C+PN Y LVN + + G + A E F+++ GI PD+ +Y L++
Sbjct: 915 HEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDI 974
Query: 303 ---AYRLISRMH-------MGCEPDRASYNIMVDAYGRA 331
A R+ +H G +PD +YN+M++ GR+
Sbjct: 975 LCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRS 1013
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 44/264 (16%)
Query: 80 NTIWDAFDS------LPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKS 133
N +D D+ LP H T++ LI S LR N+ D + L S + L +E
Sbjct: 386 NEAFDLLDTMRKQGVLPNLH-TYNTLI--SGLLRANRLDDALDLFSNMESLGVE------ 436
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
PT TY LL+ + SG KA F +M+ G+ P+ V N
Sbjct: 437 ------------------PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACN 478
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ + L + G +A +F +K P + TY +M+ Y K + A+KL +EM
Sbjct: 479 ASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV 538
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
+C+P++ +L++ + G EEA ++F +++ + P V YN L+ +A
Sbjct: 539 QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKA 598
Query: 304 YRLISRMH-MGCEPDRASYNIMVD 326
+L M+ GC P+ ++N ++D
Sbjct: 599 VQLFESMNGHGCSPNTITFNTLLD 622
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + EL S P TY +++K Y G +++A + EM K P +V NS I
Sbjct: 492 EAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLI 551
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
D L K G ++A ++F RM+ P+ TY +++ GK + A++LF M H C
Sbjct: 552 DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PN T+ L++ + + A ++F ++ PDV +N ++ +
Sbjct: 612 PNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF 659
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + ++ G +++A + + M G P V Y ID L A+ +
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCL 321
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +MK +P TY +++ + K++ EM + P++ T+T LVNA +
Sbjct: 322 FTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCK 381
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G EA ++ + ++ G+ P+++ YN L+ +A L S M +G EP +
Sbjct: 382 AGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYT 441
Query: 321 YNIMVDAYGRAGLHEGK 337
Y +++D +G++G H GK
Sbjct: 442 YILLIDYHGKSG-HPGK 457
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q K+A Y ++ P+ T++ L+ A ++ + EM G
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ Y I L + G +A I +RM D C P TYT++I+ A K A+
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF +M+S KP+ TY L++ F+ G ++ E+I+ +++ G PDV + L+
Sbjct: 320 CLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
EA+ L+ M G P+ +YN ++ RA
Sbjct: 380 CKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA 417
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P TY +L+ A C + L+ A +F +M+ P V Y + +D G+
Sbjct: 292 DDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLD 351
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
K +I+ M+ D P T+T+++N KA + A L + MR PN+ TY L+
Sbjct: 352 KVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLI 411
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ R ++A ++F ++ G+EP Y Y L++
Sbjct: 412 SGLLRANRLDDALDLFSNMESLGVEPTAYTYILLID 447
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ +C P L+ +G +E+A +F M + L P+ V YN + GL K G
Sbjct: 534 EMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEG 593
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
QKAV++F+ M C P+T T+ +++ K + +ALK+F +M + C+P++ T+
Sbjct: 594 QIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFN 653
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+++ F ++ + A +F Q++ + PD
Sbjct: 654 TIIHGFIKQNQIKNAIWLFHQMKKL-LRPD 682
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + +L+ YG+ A + ++ P +Y +L+ C++G ++ A F
Sbjct: 930 SAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFE 989
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
++++ GL P V YN I+GL + ++A+ +F M+ P TY +I G
Sbjct: 990 KLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVG 1049
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A K++ E++ KPN+ TY AL+ + G E A I++++ G +P+ +
Sbjct: 1050 MIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFA 1109
Query: 299 AL 300
L
Sbjct: 1110 QL 1111
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I G+ ++A + E+ + +P TY L+ + G++E+A ++ E++
Sbjct: 1005 LMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ YN+ I G GN + A I+++M C P+T T+ + N
Sbjct: 1065 GLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFRE 179
V IL I +LH Y E L + P Y L++ S E+A ++F E
Sbjct: 972 VDILCIAGRVDDALH------YFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G+ P YNS I L G ++A +I++ ++ +P+ TY +I Y +
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGN 1085
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVN 267
S +A ++ +M C PN T+ L N
Sbjct: 1086 SELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 98/257 (38%), Gaps = 49/257 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ G++ +KA + + C P T+ LL C + ++ A +F +M
Sbjct: 584 ILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTM 643
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--GKASKSF 241
P + +N+ I G +K + A+ +F +MK+ TL+ + G+ +F
Sbjct: 644 NCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAF 703
Query: 242 MALKLF---------------------NEMRSHK-------------CKPNICTYTALVN 267
+ F E + K CK + ++
Sbjct: 704 RITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDD-SVLIPIIK 762
Query: 268 AFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEAYRLISRMHM-----------GCE 315
+ A +F + + G++P + YN L++ + + + + GC
Sbjct: 763 VLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCA 822
Query: 316 PDRASYNIMVDAYGRAG 332
PD +YN ++DA+G++G
Sbjct: 823 PDTFTYNSLIDAHGKSG 839
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLLEK +F EM +G+ S Y + I+ + G + ++
Sbjct: 139 CKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSL 198
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ +RMK++ PS TY +IN + + L LF EMR +P+I TY L+ A
Sbjct: 199 ELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCA 258
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPD 317
+ GL +EAE +F + G+ PD+ Y L++ + ++R+ G P+
Sbjct: 259 CSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPE 318
Query: 318 RASYNIMVDAYGRAG 332
+SYN++++AY R G
Sbjct: 319 ISSYNVLLEAYARIG 333
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+ + ++R IV + L+ A + L +AE + + + +P
Sbjct: 230 WEGLLGLFAEMRHEGIQPDIVTYNT----LLCACSNRGLGDEAEMVFRTMNEGGVVPDIT 285
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + L+K + +EM G P YN ++ + GN + A +F+ M
Sbjct: 286 TYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ ETY++++ LYGK + +LF EM+ +P+ TY L++ F G
Sbjct: 346 QEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYF 405
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+E +F + +EP++ Y L+ +A +++ M G P +Y +
Sbjct: 406 KEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGV 465
Query: 325 VDAYGRAGLHE 335
++AYG+A ++E
Sbjct: 466 IEAYGQAAMYE 476
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EAY + + A + + ++ C+P +TY++LL Y G ++ +F EM+
Sbjct: 324 VLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVS 383
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET----------------- 226
P A YN+ ID +GG ++ V +F M + +P+ ET
Sbjct: 384 NTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDA 443
Query: 227 ------------------YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
YT +I YG+A+ AL N M KP I TY L+
Sbjct: 444 KKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYM 503
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
FAR GL +E E I ++ G+ + ++N ++E +R
Sbjct: 504 FARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFR 540
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 203 GNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ Q+++ +F+ M+R C+P+ YT+MI+L G+ +F EM +H ++ +
Sbjct: 121 GDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFS 180
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRM 310
YTAL+N++ R G E + E+ E+++ + P + YN ++ + L + M
Sbjct: 181 YTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEM 240
Query: 311 -HMGCEPDRASYNIMVDAYGRAGL 333
H G +PD +YN ++ A GL
Sbjct: 241 RHEGIQPDIVTYNTLLCACSNRGL 264
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 85/161 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEAYGQ +++++A T + + PT +TY L+ + GL ++ EA+ +M +G
Sbjct: 465 VIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFG 524
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ +N I+G +GG ++A++ + M++ P T ++++Y A ++
Sbjct: 525 VARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESV 584
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+ F E+++ PN+ Y ++ +A+ EA E+ +++
Sbjct: 585 EQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM 625
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ LH A+ L + + IP+ Y +++AY + + E+A M + G
Sbjct: 430 LIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMG 489
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ I +GG ++ I +M +++ +I + + + A+
Sbjct: 490 SKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAI 549
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K + EM + P+ T A+++ + GL +E+ E F++++ +GI P+V Y ++
Sbjct: 550 KAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVY 609
Query: 302 -------EAYRLISRM 310
EAY L+ M
Sbjct: 610 AKSDRWNEAYELLDEM 625
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 243 ALKLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L+LF M R CKPN YT +++ REGL E+ +IFE++ G+ V++Y AL
Sbjct: 126 SLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTAL- 184
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+++YGR G +E
Sbjct: 185 -----------------------INSYGRNGKYE 195
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ +G+ ++A L D P TY +L A SG E A V+ M
Sbjct: 148 ILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLAD 207
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+A Y + I K G ++A+ IFQ M R C+ + TY+ +I+ KA + +A
Sbjct: 208 GAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLA 267
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+L +EM CKPN T+ AL++A A+ G + A+++FEQ+ G +PD +Y L+ A
Sbjct: 268 LELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISA 327
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
+ + + M G PD YN++++A R+G+
Sbjct: 328 FDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGV 368
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y +LL C P TY +L+ + G ++A V + G P YN+ +
Sbjct: 130 VYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACN 189
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G P+ A+ +++RM D QP+ TYT +I+ YGK K AL++F +M C+ N+
Sbjct: 190 RSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVI 249
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
TY++L++A + G + A E+ +++ +P+ +NAL+ A + +M
Sbjct: 250 TYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQM 309
Query: 311 -HMGCEPDRASYNIMVDAYGR 330
GC+PD SY I++ A+ R
Sbjct: 310 PSCGCKPDAVSYAILISAFDR 330
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ + LE A V+ ++ + G P+ V YN ID K GN Q+AV++ +
Sbjct: 110 TYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDAL 169
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ +P TY +++ ++ + AL+++ M + +P TYTAL++A+ + G
Sbjct: 170 EDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKI 229
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIM 324
EEA IF+ + G E +V Y++L+ A L+ MH C+P+ ++N +
Sbjct: 230 EEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNAL 289
Query: 325 VDAYGRAG 332
+ A + G
Sbjct: 290 LSACAQGG 297
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ L KA + EMR +G+ + Y++ ++ +K + A++++ ++
Sbjct: 75 TYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQL 134
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R+ C P+ TY ++I+++GK A+++ + + KP + TY +++A R G
Sbjct: 135 LREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQP 194
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
E A ++E++ G +P Y AL+ AY R+ M GCE + +Y+ +
Sbjct: 195 EHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSL 254
Query: 325 VDAYGRAG 332
+ A +AG
Sbjct: 255 ISACEKAG 262
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TYT +I+ G + AL+L EMR H N+ TY+AL+N + E A +++ QL
Sbjct: 75 TYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQL 134
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
G P++ YN L+ EA +++ + G +P+ +YN ++ A R+G
Sbjct: 135 LREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQP 194
Query: 335 E 335
E
Sbjct: 195 E 195
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 231 INLYGKASKSFMALKLF--NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+ L +AS+ F L+ N +H C ++ TYT +++ +A E+ +++G
Sbjct: 45 VGLSNRASELFDWLRSLPDNHELAHLC--DVYTYTTIISQCGSHQQLRKALELVAEMRGH 102
Query: 289 GIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
G+ +V+ Y+ALM + + + GC P+ +YNI++D +G+ G
Sbjct: 103 GVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMG 157
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 16/238 (6%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+RL+KK ++ LL + +KA LE+ + +PT TY L+
Sbjct: 292 MRLSKKASAFTYNPLITGLL-----ARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLF 346
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
+G E A+ F EMR GL P + YNS I+G K GN ++A+ +F +KR P+
Sbjct: 347 KTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVL 406
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY ++I+ Y + A +L EM C P++CTYT L+N F+++
Sbjct: 407 TYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM 466
Query: 286 QGAGIEPDVYAYN----------ALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G+EPD +AYN A+ A++L M + G D +YN+++D + G
Sbjct: 467 LSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTG 524
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 41/284 (14%)
Query: 90 PPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT-------- 141
P +H + L+ +S + + V SC S + A+ + + H A F
Sbjct: 144 PTSHQLLNSLLRMSTKFSAECQAQKSVPASC-STQCLSAFQEMARHGVAPFVKECNCVLR 202
Query: 142 --------------YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RKYGL 185
Y ++L P+ TY LL ++C +G +++A A+ ++M R G
Sbjct: 203 VLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGC 262
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--A 243
P+ V YN I+GL + G +KA ++ M R + S TY +I G ++ F+ A
Sbjct: 263 LPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAFTYNPLIT--GLLARDFVEKA 319
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM + P + TY L++ + G E A+ F++++ G+ PD+ YN+L+
Sbjct: 320 GALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLING 379
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEG 336
Y + G P +YNI++D Y R G EG
Sbjct: 380 YCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEG 423
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C +G L+ A ++ +M GL V Y I + G +A IF M
Sbjct: 512 TYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGM 571
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
PS TYT+ I+ Y + ++A F +M +PN TY L++A R G
Sbjct: 572 VASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRT 631
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIM 324
E A + F ++ G+ P+ Y Y L++ A RL MH G PD ++N +
Sbjct: 632 ESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNAL 691
Query: 325 VDAYGRAGLHEG 336
+G +++
Sbjct: 692 FKGFGEGHMYDA 703
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + + A E+ + C+P TY +L+ CM L F EM
Sbjct: 410 ILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSK 469
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ I L G A ++ + M T TY ++I+ K A
Sbjct: 470 GLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDA 529
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ +M + + + TYT L++A G EA+ IF+ + +G+ P V Y +
Sbjct: 530 YVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHT 589
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
Y +++ G EP+ +YN+++ A R G E
Sbjct: 590 YCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTE 632
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 11/246 (4%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
D + + L L + + IV LI+ + + A+ + E+ +P TY
Sbjct: 314 DFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITY 373
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
L+ YC +G L++A +F ++++ GL P+ + YN IDG + G+ + A + + M
Sbjct: 374 NSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTE 433
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ C P TYT+++N M F+EM S +P+ Y ++A G
Sbjct: 434 EDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITN 493
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVD 326
A ++ E++ GI D YN L+ +AY L +M G D +Y ++
Sbjct: 494 AFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIH 553
Query: 327 AYGRAG 332
A+ G
Sbjct: 554 AHCERG 559
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 118 MSCVS-ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+ CV+ LI A+ ++ +A+ + ++ S P+ TY + + YC G L A
Sbjct: 543 LDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGW 602
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
FR+M + G+ P+ V YN + L + G + A + F M P+ TYTL+I+ K
Sbjct: 603 FRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCK 662
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
A++L+ EM P+ CT+ AL F EG +A + E +
Sbjct: 663 EGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFG-EGHMYDAVQYLENV 710
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A++ + E+ C PT TY L+ AY + + +A +F M
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ V Y + +DGL K GN KA E++ ++ R P+ TY
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A +L + M S C+PN Y AL++ F + G + A+E+F Q+
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676
Query: 288 AGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G P V+ Y +L++ A +++S+M C P+ +Y M+D R G E
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 735
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 36/233 (15%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P TY+ ++ C + +EKA +F+EM+ G+ P Y ID K G
Sbjct: 447 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 506
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F+ M+ C P+ TYT +I+ Y KA + A +F+ M C+PN TY
Sbjct: 507 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 566
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG----------------IEPDVYAYNALME----- 302
ALV+ + G +A E++ +L G + P+V Y AL++
Sbjct: 567 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 626
Query: 303 -----AYRLISRM-HMGCEPDRASYNIMVDAYGRAG---------LHEGKCSY 340
A+ L+ M GCEP+ Y+ ++D + +AG L KC Y
Sbjct: 627 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 679
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + C+ + A + C G +KA + +EM + G P Y+ I
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 465
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +KA +FQ MK P TYT++I+ + KA A LF EMRS C P
Sbjct: 466 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 525
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TYTAL++A+ + +A +IF ++ AG P+ Y AL++
Sbjct: 526 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 571
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + ++ A + M G P+ +VY++ IDG K G A E+
Sbjct: 611 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 670
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M + PS TYT +I+ K + +A+K+ ++M C PN+ TYTA+++ R
Sbjct: 671 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 730
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G E+A ++ ++ G P+V Y AL++
Sbjct: 731 IGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S C P Y L+ +C +G ++ A+ VF +M K G PS Y S ID + K G
Sbjct: 639 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 698
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ +M +D C P+ TYT MI+ + +S ALKL + M C PN+ TYTA
Sbjct: 699 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 758
Query: 265 LVNAFAR 271
L++ +
Sbjct: 759 LIDGLGQ 765
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 150 CIPTEDTYALLLKAYC------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
C P Y + + + C LL+ AE ++ EM + V ++ L G
Sbjct: 377 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 436
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++ + M R P T TY+ +I A+K A LF EM+ P++ TYT
Sbjct: 437 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 496
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
L+++F + GL E+A+ +FE+++ G P V Y AL+ AY + RM
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC P+ +Y +VD +AG
Sbjct: 557 GCRPNDVTYGALVDGLCKAG 576
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM---- 180
LI AY + +A + ++D+ C P + TY L+ C +G + KA V+ ++
Sbjct: 533 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 592
Query: 181 ------------RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
++ L P+ V Y + +DGL K A E+ M C+P+ Y
Sbjct: 593 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 652
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ + KA K A ++F +M P++ TYT+L++ ++G + A ++ Q+
Sbjct: 653 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 712
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
P+V Y A+++ A +L+S M GC P+ +Y ++D G++
Sbjct: 713 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 129/319 (40%), Gaps = 31/319 (9%)
Query: 41 GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRF-VQREV-DSNTIWDAFDSLPPTHAT--- 95
G L+ G++ + + VLS Q L F VQ+E+ +S D F HA
Sbjct: 198 GRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 257
Query: 96 --WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPT 153
W D +++ R + K D ++ +S L+ +Y +++ F + +S CIP
Sbjct: 258 GRWADALDMIE--REDFKLDTVLCTHMISGLMEASYFDEAM----SFLHRMRCNS-CIPN 310
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
TY LL + L + + M G P+ ++NS + + A ++
Sbjct: 311 VVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLN 370
Query: 214 RMKRDCCQPSTETYTLMINLYGKASK------SFMALKLFNEMRSHKCKPNICTYTALVN 267
RM C P Y + I K +A K++ EM + C N
Sbjct: 371 RMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFAR 430
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEP 316
G ++A ++ +++ G PD Y+ ++ +A+ L M M G P
Sbjct: 431 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 490
Query: 317 DRASYNIMVDAYGRAGLHE 335
D +Y I++D++ +AGL E
Sbjct: 491 DVYTYTILIDSFCKAGLIE 509
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 107/202 (52%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+L+ P Y +L+ +C G + A+ +F E+RK GL P+ V +N+ I+GL K
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
N + + + M+ + P TY+++I+ K + +A +LF+EM+ +PN T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
+TAL++ R + A + Q+ G++PD+ YN L+ +A +L+ M
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
M G +PD+ +Y ++D Y + G
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEG 412
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++R P TY++L+ C G L+ AE +F EM++ GL P+ + + + IDG +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ + +M +P Y ++N K A KL +EMR KP+ TYT L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ + +EG E A EI + + G+ D A+ AL+ +A R + M G +
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 316 PDRASYNIMVDAYGRAG 332
PD A+Y +++D Y + G
Sbjct: 466 PDDATYTMVIDGYCKKG 482
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 8/188 (4%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ YC G LE A + + M + G+ V + + I G + G + A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P TYT++I+ Y K M KL EM+ + KP + TY L+N +
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHMGCEPDRASYNI 323
+G + A + E + G+ PD YN L+E + L R G D A Y
Sbjct: 516 QGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTS 575
Query: 324 MVDAYGRA 331
+V Y ++
Sbjct: 576 LVSEYNKS 583
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY ++L P Y LL C G + KA + EMR G+ P + Y + IDG
Sbjct: 350 TYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYC 409
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G+ + A+EI + M + +T +I+ + + + A + EM KP+
Sbjct: 410 KEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDA 469
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISR 309
TYT +++ + ++G + ++ +++Q G +P V YN LM L +
Sbjct: 470 TYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAM 529
Query: 310 MHMGCEPDRASYNIMVDAYGRAGLHE 335
+++G PD +YNI+++ + + G E
Sbjct: 530 LNLGVTPDDITYNILLEGHCKNGKAE 555
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 136/316 (43%), Gaps = 37/316 (11%)
Query: 48 WKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDA---FD-----SLPPTHATWDDL 99
W + S ++ FP P Q + + +I DA F+ L PT +++ L
Sbjct: 208 WTFYSEILEYGFP---PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTL 264
Query: 100 IN-------VSVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
IN + RL K + P V V LI ++ AE + E+
Sbjct: 265 INGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSV---LIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
P T+ L+ C S ++ A + +M G+ P V+YN+ ++GL K G+ K
Sbjct: 322 RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ M+ +P TYT +I+ Y K A+++ M + +TAL++
Sbjct: 382 ARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEP 316
F R+G +AE ++ AG++PD Y +++ Y +L+ M + G +P
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Query: 317 DRASYNIMVDAYGRAG 332
+YN++++ + G
Sbjct: 502 GVITYNVLMNGLCKQG 517
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 103 SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
++++R + +VL + LI + + + AE T E++++ P + TY +++
Sbjct: 417 AMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVID 476
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
YC G ++ + +EM+ G P + YN ++GL K G + A + + M P
Sbjct: 477 GYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536
Query: 223 STETYTLMINLYGKASKSFMALKLFNE 249
TY +++ + K K+ LKL NE
Sbjct: 537 DDITYNILLEGHCKNGKAEDLLKLRNE 563
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 26/234 (11%)
Query: 116 VLMSCVSIL--LIEAYGQKSLHKKAEFTYLELLDS---RCIPTEDTYALLLKAYCMSGLL 170
+ C SI+ L+ G+ S A + +LD+ RC + + L+ AY SG +
Sbjct: 116 MFQECQSIIRFLVSRKGKDS----AASVFAAILDTAGTRC--SNFVFDALMIAYWDSGFV 169
Query: 171 EKAEAVFREMRK--YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
A FR +R + +P Y +D ++ +P + + P + Y
Sbjct: 170 SDAIQCFRLVRNSNFQIPFHGCGY--LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYN 227
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++IN + K A +FNE+R +P ++ L+N + +E + + ++
Sbjct: 228 ILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN 287
Query: 289 GIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
I PDV+ Y+ L+ A +L M G P+ ++ ++D R+
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRS 341
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 103/179 (57%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + +A + E+ +P TY++L+K C +E+A+ + +EM+K G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+AV YN+ IDG K GN +KA+E+ +M +P+ T++ +I+ Y KA K A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ EM P++ YTAL++ ++G +EA + +++Q AG+ P+V+ + L++
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 27/302 (8%)
Query: 52 SGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF--DSLPPTHATWDDLINVSVQLRLN 109
S F +F VL I+ F + + +W + D LP A L + + R +
Sbjct: 122 SKFTPNVFGVL------IIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFD 175
Query: 110 KKW----DPIVLMSCVSIL----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
W D + + +++ LI+ ++ KA + E+++ + PT Y +L+
Sbjct: 176 TMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILI 235
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+ C + +AE++FR MR G+ P+ YN+ +DG K + +KA+E++ M D
Sbjct: 236 RGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLL 295
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P+ T+ ++I+ K + A K +M S PNI Y L++ + + G EA +
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGR 330
+++ I PDV+ Y+ L++ + RM G P+ +YN ++D Y +
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415
Query: 331 AG 332
G
Sbjct: 416 EG 417
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y + + KKA Y E+L +P T+ +L+ C + + A +M +G
Sbjct: 269 MMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ VYN IDG K GN +A+ + +++ P TY+++I + A
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L EM+ PN TY L++ + +EG E+A E+ Q+ GIEP++ ++ L++ Y
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+M G PD +Y ++D + + G
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 14/240 (5%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+ KK P V+ + +LI +S +AE + + +S +P TY ++ YC
Sbjct: 220 IEKKIFPTVV---IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
++KA ++ EM GL P+ V + IDGL K A + M P+ Y
Sbjct: 277 AHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I+ Y KA AL L +E+ H+ P++ TY+ L+ EEA+ + ++++
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
G P+ YN L++ Y + S+M G EP+ +++ ++D Y +AG E
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y ++ +KA ++ + P T++ L+ YC +G +E A ++ EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y + IDG K GN ++A + + M+ P+ T + +I+ K + A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 245 KLF-------------NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
KLF NE+ C PN YTAL+ +G +A + F ++ +G+
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588
Query: 292 PDVYAYNALMEAYRLISRMH-------------MGCEPDRASYNIMVDAYGRAGLHEGKC 338
PDV+ +++ + MH MG P+ + Y ++ Y +G +
Sbjct: 589 PDVFTCIVIIQGH--FRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL 646
Query: 339 SY 340
S+
Sbjct: 647 SF 648
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 11/220 (5%)
Query: 134 LHKKAEF-----TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L KK F Y +++ P TY L+ C G KA +F EM + + P+
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V+Y I GL +A +F+ M+ P+ TY M++ Y K + AL+L+
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYX 287
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
EM PN+ T+ L++ + A + + G+ P+++ YN L++ Y
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
L + + E ++ + I+ D + + L +G C +E
Sbjct: 348 NLSEALSLHSEIEK--HEILPDVFTYSILIKGLCGVDRME 385
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P+ TY+ L+ +CM L++A+ +F M
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I G K ++ +E+F+ M + +T TY ++I +A MA
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
++F EM S PNI TY L++ + G E+A +FE LQ + +EP +Y YN ++E
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +PD +YN M+ + R G E
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L++ +G + A+ +F+EM G+PP+ + YN+ +DGL K G +KA+ +F+ +
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P+ TY +MI KA K LF + KP++ Y +++ F R+G
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 347
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EEA+ +F++++ G P+ YN L+ A
Sbjct: 348 EEADALFKEMKEDGTLPNSGCYNTLIRA 375
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 26/209 (12%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +++ C G + A + +M + L P ++YN+ IDGL K + A+
Sbjct: 12 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71
Query: 210 EIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+F+ M+ +P+ TY+ +I+ YG+ S A +L ++M K P++ T++AL+
Sbjct: 72 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD---ASRLLSDMIERKINPDVFTFSALI 128
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CE 315
+AF +EG EAE++++++ I+P + Y++L+ + + R+ C
Sbjct: 129 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 188
Query: 316 PDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
PD +YN ++ +G C Y VE
Sbjct: 189 PDVVTYNTLI---------KGFCKYKRVE 208
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 23/266 (8%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
NTI D + DD +N+ ++ K P V+ I + YG+ S A
Sbjct: 55 NTIIDGL----CKYKHMDDALNLFKEME-TKGIRPNVVTYSSLISCLCNYGRWS---DAS 106
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
++++ + P T++ L+ A+ G L +AE ++ EM K + PS V Y+S I+G
Sbjct: 107 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 166
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+A ++F+ M C P TY +I + K + +++F EM N
Sbjct: 167 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRL 306
TY L+ + G C+ A+EIF+++ G+ P++ YN L++ +
Sbjct: 227 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 286
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
+ R M EP +YNIM++ +AG
Sbjct: 287 LQRSKM--EPTIYTYNIMIEGMCKAG 310
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ C ++ A +F+EM G+ P+ V Y+S I L G A + M
Sbjct: 54 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 113
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T++ +I+ + K K A KL++EM P+I TY++L+N F +
Sbjct: 114 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 173
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR-----------ASYNIMV 325
EA+++FE + PDV YN L++ + R+ G E R +YNI++
Sbjct: 174 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233
Query: 326 DAYGRAG 332
+AG
Sbjct: 234 QGLFQAG 240
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Q A+ + E++ P TY LL C +G LEKA VF +++
Sbjct: 231 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ YN I+G+ K G + ++F + +P Y MI+ + + A
Sbjct: 291 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF EM+ PN Y L+ A R+G E + E+ ++++ G D
Sbjct: 351 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ M G P V Y ++GL K G+ A + +M++ +P Y +I+
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K AL LF EM + +PN+ TY++L++ G +A + + I PDV
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 295 YAYNALMEAY 304
+ ++AL++A+
Sbjct: 122 FTFSALIDAF 131
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 33/180 (18%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
D +PP T++ L++ L N K + +++ Y Q+S + +TY ++
Sbjct: 255 DGVPPNIMTYNTLLD---GLCKNGKLE--------KAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 147 DSRCI--------------------PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
+ C P Y ++ +C G E+A+A+F+EM++ G
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
P++ YN+ I L+ G+ + + E+ + M+ T L+ N+ G+ KSF+ +
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 423
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L + M + C+P++ TY +VN + G + A + +++ +EP V YN ++
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDA---YGR 330
+A L M G P+ +Y+ ++ YGR
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 101
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ + +KAE + EL P TY LL A+ G EK + EM K G
Sbjct: 362 MISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRG 421
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ YN+ I K G +A++I++ MK P TYT++I+ GKASK A
Sbjct: 422 FGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAA 481
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +EM KP + TY+AL+ A+A+ G EEAEE F ++ +GI+PD AY+ +++ +
Sbjct: 482 NVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFF 541
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
+ M G PD Y +M+ A R +
Sbjct: 542 LRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENM 581
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++S ++A + ++ RC P TY ++ Y KAE +F+E+ G
Sbjct: 327 LISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKG 386
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + + GN +K +I + M + TY +I++YGK + A+
Sbjct: 387 FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAM 446
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+++ +M+S P+ TYT L+++ + EEA + ++ AG++P ++ Y+AL+ AY
Sbjct: 447 QIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAY 506
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGR 330
+ G +PDR +Y++M+D + R
Sbjct: 507 AKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLR 543
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 14/204 (6%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEK--AEAVFREMRKYGLPPSAVVYNSYIDGL 199
L+L+ R C+P ++ L+ A SG +E A + E+R+ G+ P + YN+ I
Sbjct: 272 LDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISAC 331
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N ++AV +F M+ CQP TY MI++YG+ +++ A +LF E+ S P+
Sbjct: 332 SRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDA 391
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM--- 312
TY +L+ AF+REG E+ +I E++ G D YN ++ Y R M +
Sbjct: 392 VTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRD 451
Query: 313 ----GCEPDRASYNIMVDAYGRAG 332
G PD +Y +++D+ G+A
Sbjct: 452 MKSSGRNPDAVTYTVLIDSLGKAS 475
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG--NPQKAVE 210
T Y ++ Y +G K + + MR+ G P V +N+ I+ +K G P A++
Sbjct: 248 TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQ 307
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++R +P TY +I+ + S A+ +F++M SH+C+P++ TY A+++ +
Sbjct: 308 LLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYG 367
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHMGCEP--------DRA 319
R +AEE+F++L+ G PD YN+L+ A+ ++ CE D
Sbjct: 368 RCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEM 427
Query: 320 SYNIMVDAYGRAGLHE 335
+YN ++ YG+ G H+
Sbjct: 428 TYNTIIHMYGKQGRHD 443
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K Y ++ D+ P E+TY L+ YC E+ ++ +MR GL P Y S
Sbjct: 966 KSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSL 1025
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I K ++A E+F+ ++ + + Y LM+ Y + A L M+
Sbjct: 1026 ITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGI 1085
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------- 304
+P I T L+ ++ + G EEAE + + L+ G+ D Y+++++AY
Sbjct: 1086 EPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIE 1145
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
+L G EPD + + A A L EG
Sbjct: 1146 KLTEMKEAGIEPDHRIWTCFIRA---ATLSEG 1174
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG++ H +A Y ++ S P TY +L+ + + +E+A V EM G
Sbjct: 432 IIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAG 491
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y++ I K G ++A E F M+R +P Y++M++ + + ++ A+
Sbjct: 492 VKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAM 551
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG-AGIEPDVYA 296
L++EM P+ Y +++A RE + + + I ++ +G+ P V +
Sbjct: 552 GLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVIS 604
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+A + + + L K AVEIF R + + + Y M+ +Y + + +L
Sbjct: 213 PNARMVATILGVLGKANQEALAVEIFARAESSVGD-TVQVYNAMMGVYARNGRFSKVKEL 271
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEE--AEEIFEQLQGAGIEPDVYAYNALM--- 301
+ MR C P++ ++ L+NA + G E A ++ +++ +GI PD+ YN L+
Sbjct: 272 LDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISAC 331
Query: 302 -------EAYRLISRMHMG-CEPDRASYNIMVDAYGR 330
EA + S M C+PD +YN M+ YGR
Sbjct: 332 SRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGR 368
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILL--IEAYGQKSLHKKAEFTYLELLDSRCIPTE- 154
DL + L + + + I+L + +S+ + +E YG+ + +KAE + + L RC +
Sbjct: 751 DLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAE-SLVGSLRQRCSKMDR 809
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+ L+ AY SG E+A A+F M + G P+ N + L+ + + Q
Sbjct: 810 KVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQE 869
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
++ + S + L + + +A F K++N M++ P + Y ++ +
Sbjct: 870 LQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKR 929
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-MGC----------EPDRASYNI 323
+ E + +++ AG +PD+ N++++ Y I MG +PD +YN
Sbjct: 930 VRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNT 989
Query: 324 MVDAYGR 330
++ Y R
Sbjct: 990 LIIMYCR 996
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ S ++A E+LD+ PT TY+ L+ AY +G E+AE F MR+
Sbjct: 466 VLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRS 525
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
G+ P + Y+ +D L+ +KA+ ++ M R+ P Y +M++
Sbjct: 526 GIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMH 574
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ ++++AE + EL + Y L++K Y SG KAE + M++ G
Sbjct: 1025 LITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESG 1084
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K G P++A + + ++ T Y+ +I+ Y K +
Sbjct: 1085 IEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGI 1144
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ EM+ +P+ +T + A EA + LQ AG +
Sbjct: 1145 EKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGFD 1191
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI--EPDVYAYNA 299
+A ++F++MR + + + C Y +V+ + R L E A + + GI + D+ Y
Sbjct: 720 VASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVYID 779
Query: 300 LMEAY----------RLISRMHMGCEP-DRASYNIMVDAYGRAGLHE 335
++E Y L+ + C DR +N ++ AY +G +E
Sbjct: 780 IVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYE 826
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 43/261 (16%)
Query: 88 SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
++PP+ +T+++LIN A G K+A ++ +
Sbjct: 227 AIPPSRSTYNNLIN--------------------------ACGSSGNWKEALNVCKKMTE 260
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ P T+ ++L AY K + F M+ + P N I L+K G K
Sbjct: 261 NGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGK 320
Query: 208 AVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A++IF MK R C P T+T +I+LY + FN M + KPNI +Y AL
Sbjct: 321 AIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNAL 380
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHM 312
+ A+A G+ +EA +F +++ G PDV +Y +L+ AY L+ R H
Sbjct: 381 IGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNH- 439
Query: 313 GCEPDRASYNIMVDAYGRAGL 333
C+P+ SYN ++DAYG GL
Sbjct: 440 -CKPNLVSYNALIDAYGSKGL 459
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F ++ S C P T+ ++ Y + G +E + F M GL P+ V YN+ I
Sbjct: 325 FNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAY 384
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G ++A +F +K++ P +YT ++N YGK+ K A+K+F MR + CKPN+
Sbjct: 385 ASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNL 444
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+Y AL++A+ +GL EA EI +++ G++P++ + L+ A
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ + A ++L + P+ TY L+ A SG ++A V ++M + G
Sbjct: 203 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENG 262
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +N + +G K + F+ MK +P T T ++I K ++ A+
Sbjct: 263 VGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAI 322
Query: 245 KLFNEMRSHK--CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+FN M+ + C P++ T+T +++ ++ G E + F + G++P++ +YNAL+
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIG 382
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
EA+ + + + G PD SY +++AYG++G E
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ AY G+ ++A +VF E++K G P V Y S ++ K G P+KA+++
Sbjct: 372 PNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKV 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R+ C+P+ +Y +I+ YG A+++ +EM + +PNI + L+ A R
Sbjct: 432 FELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGR 491
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G + + + + GI+ + AYN+ + +Y + +PD +
Sbjct: 492 CGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVT 551
Query: 321 YNIMVDA 327
YN+++
Sbjct: 552 YNVLISG 558
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 101/253 (39%), Gaps = 46/253 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + K+A + E+ + P +Y LL AY SG EKA VF MR+
Sbjct: 380 LIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNH 439
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP---------------------- 222
P+ V YN+ ID G +AVEI M+R+ QP
Sbjct: 440 CKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIK 499
Query: 223 -------------STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+T Y I Y + AL L+ MR+ K KP+ TY L++
Sbjct: 500 SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGC 559
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
+ EA +++ I Y++++ EA + ++M M GC PD
Sbjct: 560 CKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
Query: 319 ASYNIMVDAYGRA 331
+Y M+ AY A
Sbjct: 620 ITYTAMIHAYDVA 632
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 25/253 (9%)
Query: 96 WDD---LINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
WDD L+N V R ++K P+++ I +E H F +++ + C
Sbjct: 110 WDDVEGLLNRWVG-RFSRKNFPLLIREITQIGSLE-------HSVQVFRWMKNQKNYC-A 160
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
D Y ++++ + ++++A +F EM+K+ P A YN+ I+ + G + A+ I
Sbjct: 161 RNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIM 220
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M R PS TY +IN G + AL + +M + P++ T+ +++A+ R
Sbjct: 221 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRG 280
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDRA 319
+ FE ++G I PD N + ++ + + C PD
Sbjct: 281 NQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVV 340
Query: 320 SYNIMVDAYGRAG 332
++ ++ Y G
Sbjct: 341 TFTTIIHLYSVCG 353
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + +Y G +KA +++R MR + P V YN I G K +A+ M
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
S E Y+ +I Y K + A +F +M+ C+P++ TYTA+++A+ E
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A +F +++ ++PD A ++LM A+
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAF 664
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 203 GNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G+ + +V++F+ MK ++ C + Y +MI L+ + + A LF EM+ +CKP+
Sbjct: 140 GSLEHSVQVFRWMKNQKNYC-ARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAE 198
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
TY AL+NA R G A I + + A I P YN L+ EA + +M
Sbjct: 199 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 258
Query: 311 -HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
G PD ++NI++ AY R + SY
Sbjct: 259 TENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I +Y + KA Y + + P TY +L+ C +A EM +
Sbjct: 521 IGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKI 580
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P S VY+S I K G +A +F +MK C+P TYT MI+ Y A A
Sbjct: 581 PLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASA 640
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREG 273
LF EM + +P+ ++L+ AF + G
Sbjct: 641 LFLEMETDDVQPDSIACSSLMRAFNKGG 668
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY ++ +AE + ++ C P TY ++ AY ++ EKA A+F EM
Sbjct: 590 VICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDD 649
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEI--FQRMKR------------DCC---------- 220
+ P ++ +S + KGG P K + + F R K+ C
Sbjct: 650 VQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREII 709
Query: 221 ------QPSTETYTL-----MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+PS ++ +++ GK+ K +KLF ++ + + N TY+ L+
Sbjct: 710 GLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNL 769
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G + E+ + ++ AG++P V Y ++
Sbjct: 770 LAAGNWRKYIEVLQWMEEAGLQPSVGMYRSI 800
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D + +++ Y+ ++ AY G + +AE++F +M+ G P + Y + I
Sbjct: 574 EMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAE 633
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +KA +F M+ D QP + + ++ + K + L L MR K N ++
Sbjct: 634 NWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFF 693
Query: 264 ALVNA 268
+V+A
Sbjct: 694 EMVSA 698
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q +A Y + C+P T + ++ C +G + A +F+ M G
Sbjct: 145 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 204
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ VVY++ I GL K A+E+ +MK+ C P T TY ++I+ K+ A
Sbjct: 205 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAAR 264
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+EM CKP++ TY L++ F + G + A +F+ + + P+V Y L+
Sbjct: 265 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGL 324
Query: 305 ---RLISR-----MHM---GCEPDRASYNIMVDAYGRAGLHEGKC 338
R +++ HM GC PD Y+ +VD ++G EG C
Sbjct: 325 CKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 369
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT TY LL C G LE+A + R++ G P V Y S IDGL K +A
Sbjct: 65 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F+ M T YT +I +A K A ++ M S C P++ T + +++
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPDR 318
+ G A IF+ ++ G+ P+ Y+AL+ A ++++M C PD
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244
Query: 319 ASYNIMVDAYGRAG 332
+YNI++D ++G
Sbjct: 245 ITYNILIDGLCKSG 258
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +L+ C SG + A A F EM + G P YN I G K GN A
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M C P+ TY +I+ K + A + M+ C P+ Y++LV+
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359
Query: 270 AREGLCEEAEEIFEQLQGAGIEPD---------VYAYNALMEAYRLISRMHMGCEPDRAS 320
+ G E +F++++ +G+ + N + EA L + + P +
Sbjct: 360 CKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA 419
Query: 321 YNIMVDAYGRAG-LHEGKCSY 340
YN ++ A ++G ++EG+ Y
Sbjct: 420 YNSIISALIKSGKVNEGQAVY 440
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+++L+ +G+L +A ++ +E G Y + +D L K Q+AV + +++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY ++N K + A+ L ++ + C P++ TYT+L++ ++
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
EA ++F+++ G+ D Y AL+ ++ GC PD + + M
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 325 VDAYGRAG 332
+D +AG
Sbjct: 181 IDGLCKAG 188
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + A + E+L++ C P TY +L+ +C +G + A VF +M
Sbjct: 249 ILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 308
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V Y + I GL K KA +Q MK C P + Y+ +++ K+ K
Sbjct: 309 RCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGG 368
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF+EM N T T L+ + +EA +F ++ G+ P YAYN+++ A
Sbjct: 369 CMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISA 426
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A++ + E+ C PT TY L+ AY + + +A +F M
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ V Y + +DGL K GN KA E++ ++ R P+ TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A +L + M S C+PN Y AL++ F + G + A+E+F Q+
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 288 AGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G P V+ Y +L++ A +++S+M C P+ +Y M+D R G E
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S C P Y L+ +C +G ++ A+ VF +M K G PS Y S ID + K G
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 529
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ +M +D C P+ TYT MI+ + +S ALKL + M C PN+ TYTA
Sbjct: 530 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L++ + G + + ++F Q+ G P+ Y L+
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 36/233 (15%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P TY+ ++ C + +EKA +F+EM+ G+ P Y ID K G
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F+ M+ C P+ TYT +I+ Y KA + A +F+ M C+PN TY
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 397
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG----------------IEPDVYAYNALME----- 302
ALV+ + G +A E++ +L G + P+V Y AL++
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457
Query: 303 -----AYRLISRM-HMGCEPDRASYNIMVDAYGRAG---------LHEGKCSY 340
A+ L+ M GCEP+ Y+ ++D + +AG L KC Y
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + ++ A + M G P+ +VY++ IDG K G A E+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M + PS TYT +I+ K + +A+K+ ++M C PN+ TYTA+++ R
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G E+A ++ ++ G P+V Y AL++ + L ++M GC P+ +
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y ++++ AGL + K L E+ ++P
Sbjct: 622 YRVLINHLCAAGLLD-KARLLLGEMKQTYWP 651
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + C+ + A + C G +KA + +EM + G P Y+ I
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +KA +FQ MK P TYT++I+ + KA A LF EMRS C P
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TYTAL++A+ + +A +IF ++ AG P+ Y AL++
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 27/235 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM---- 180
LI AY + +A + ++D+ C P + TY L+ C +G + KA V+ ++
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423
Query: 181 ------------RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
++ L P+ V Y + +DGL K A E+ M C+P+ Y
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ + KA K A ++F +M P++ TYT+L++ ++G + A ++ Q+
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
P+V Y A+++ A +L+S M GC P+ +Y ++D G+AG
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ +L++ +P+ TY L+ G L+ A V +M K
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 544
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDGL + G +KA+++ M+ C P+ TYT +I+ GKA K ++L
Sbjct: 545 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF +M C PN TY L+N GL ++A + +++ + Y ++ +
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664
Query: 305 --RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
I+ + + G P Y +++D + +AG
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 701
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 150 CIPTEDTYALLLKAYC------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
C P Y + + + C LL+ AE ++ EM + V ++ L G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++ + M R P T TY+ +I A+K A LF EM+ P++ TYT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
L+++F + GL E+A+ +FE+++ G P V Y AL+ AY + RM
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC P+ +Y +VD +AG
Sbjct: 388 GCRPNDVTYGALVDGLCKAG 407
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 33/318 (10%)
Query: 43 LRGKGWKYGSGFVDGIFPVLSPTAQQILRF-VQREV-DSNTIWDAFDSLPPTHAT----- 95
L+ G++ + + VLS Q L F VQ+E+ +S D F HA
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD-SRCIPTE 154
W D +++ R + K D ++ +S L+ +Y +++ ++L + + CIP
Sbjct: 91 WADALDMIE--REDFKLDTVLCTHMISGLMEASYFDEAM------SFLHRMRCNSCIPNV 142
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY LL + L + + M G P+ ++NS + + A ++ R
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202
Query: 215 MKRDCCQPSTETYTLMI-NLYGK---ASKSFMAL--KLFNEMRSHKCKPNICTYTALVNA 268
M C P Y + I ++ G+ S + L K++ EM + C N
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
G ++A ++ +++ G PD Y+ ++ +A+ L M M G PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 318 RASYNIMVDAYGRAGLHE 335
+Y I++D++ +AGL E
Sbjct: 323 VYTYTILIDSFCKAGLIE 340
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 35/167 (20%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAE---------------------------------AV 176
C P TY +L+ C +GLL+KA +
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 674
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--DCCQPSTETYTLMINLY 234
EM YG P A VY ID K G + A+E+ + M + + Y +I
Sbjct: 675 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 734
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
AS+ A +L++EM P + + L+ +EA ++
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A++ + E+ C PT TY L+ AY + + +A +F M
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ V Y + +DGL K GN KA E++ ++ R P+ TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A +L + M S C+PN Y AL++ F + G + A+E+F Q+
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 288 AGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G P V+ Y +L++ A +++S+M C P+ +Y M+D R G E
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S C P Y L+ +C +G ++ A+ VF +M K G PS Y S ID + K G
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 529
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ +M +D C P+ TYT MI+ + +S ALKL + M C PN+ TYTA
Sbjct: 530 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L++ + G + + ++F Q+ G P+ Y L+
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 36/233 (15%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P TY+ ++ C + +EKA +F+EM+ G+ P Y ID K G
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F+ M+ C P+ TYT +I+ Y KA + A +F+ M C+PN TY
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 397
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG----------------IEPDVYAYNALME----- 302
ALV+ + G +A E++ +L G + P+V Y AL++
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457
Query: 303 -----AYRLISRM-HMGCEPDRASYNIMVDAYGRAG---------LHEGKCSY 340
A+ L+ M GCEP+ Y+ ++D + +AG L KC Y
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + ++ A + M G P+ +VY++ IDG K G A E+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M + PS TYT +I+ K + +A+K+ ++M C PN+ TYTA+++ R
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G E+A ++ ++ G P+V Y AL++ + L ++M GC P+ +
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y ++++ AGL + K L E+ ++P
Sbjct: 622 YRVLINHLCAAGLLD-KARLLLGEMKQTYWP 651
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + C+ + A + C G +KA + +EM + G P Y+ I
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +KA +FQ MK P TYT++I+ + KA A LF EMRS C P
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TYTAL++A+ + +A +IF ++ AG P+ Y AL++
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 27/235 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM---- 180
LI AY + +A + ++D+ C P + TY L+ C +G + KA V+ ++
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423
Query: 181 ------------RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
++ L P+ V Y + +DGL K A E+ M C+P+ Y
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ + KA K A ++F +M P++ TYT+L++ ++G + A ++ Q+
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
P+V Y A+++ A +L+S M GC P+ +Y ++D G+AG
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ +L++ +P+ TY L+ G L+ A V +M K
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 544
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDGL + G +KA+++ M+ C P+ TYT +I+ GKA K ++L
Sbjct: 545 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF +M C PN TY L+N GL ++A + +++ + Y ++ +
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664
Query: 305 --RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
I+ + + G P Y +++D + +AG
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 701
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 150 CIPTEDTYALLLKAYC------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
C P Y + + + C LL+ AE ++ EM + V ++ L G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++ + M R P T TY+ +I A+K A LF EM+ P++ TYT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
L+++F + GL E+A+ +FE+++ G P V Y AL+ AY + RM
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC P+ +Y +VD +AG
Sbjct: 388 GCRPNDVTYGALVDGLCKAG 407
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 129/318 (40%), Gaps = 33/318 (10%)
Query: 43 LRGKGWKYGSGFVDGIFPVLSPTAQQILRF-VQREV-DSNTIWDAFDSLPPTHAT----- 95
L+ G++ + + VLS Q L F VQ+E+ +S D F HA
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD-SRCIPTE 154
W D +++ R + K D ++ +S L+ +Y +++ ++L + + CIP
Sbjct: 91 WADALDMIE--REDFKLDTVLCTHMISGLMEASYFDEAM------SFLHRMRCNSCIPNV 142
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY LL + L + + M G P+ ++NS + + A ++ R
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202
Query: 215 MKRDCCQPSTETYTLMINLYGKASK------SFMALKLFNEMRSHKCKPNICTYTALVNA 268
M C P Y + I K +A K++ EM + C N
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
G ++A ++ +++ G PD Y+ ++ +A+ L M M G PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 318 RASYNIMVDAYGRAGLHE 335
+Y I++D++ +AGL E
Sbjct: 323 VYTYTILIDSFCKAGLIE 340
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 35/167 (20%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAE---------------------------------AV 176
C P TY +L+ C +GLL+KA +
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 674
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--DCCQPSTETYTLMINLY 234
EM YG P A VY ID K G + A+E+ + M + + Y +I
Sbjct: 675 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 734
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
AS+ A +L++EM P + + L+ +EA ++
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 106/193 (54%), Gaps = 15/193 (7%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++LL AY +GL+E A+A+ R G+P V YN+ I L+ G +KA++ + +
Sbjct: 831 SILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTN 890
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+PS +TY MI+++ K+ ++ A K+F +++S +P+ Y+ ++N +A+ G+ E
Sbjct: 891 LGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEH 950
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVD 326
A ++FE ++ G+ P +YN L++AY L+ GC P ++ +++
Sbjct: 951 AADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLIS 1010
Query: 327 AYGRAGLHEGKCS 339
AY H GKC+
Sbjct: 1011 AYA----HRGKCN 1019
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA TY L + P+ TY ++ + SG AE +F++++ G P VY+
Sbjct: 879 KKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQM 938
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++ K G + A ++F+ MK +P +Y +I+ Y +A + A +L EM C
Sbjct: 939 MNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGC 998
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRM-- 310
P+ T+ L++A+A G C EAE E++Q A I P V YN +M A+ RL S+
Sbjct: 999 PPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAME 1058
Query: 311 ------HMGCEPDRASYNIMV 325
G +PD S M+
Sbjct: 1059 SYLKMERSGIQPDVVSSRTMI 1079
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 19/267 (7%)
Query: 87 DSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKK 137
D +P ++ +I ++ RL K D ++ + + +I + + +
Sbjct: 856 DGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRD 915
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + +L + P E Y+ ++ Y SG+ E A +F M+ GL P V YN+ ID
Sbjct: 916 AEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLID 975
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G KA ++ M + C PS+ T+ L+I+ Y K A M++ +P
Sbjct: 976 AYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRP 1035
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ Y ++ AF+R L +A E + +++ +GI+PDV + ++ E L
Sbjct: 1036 TVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEGLSLY 1095
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAGLH 334
+ D S ++ Y AG H
Sbjct: 1096 KKTEAKLVSDSLSREMVAKLYQGAGKH 1122
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 16/231 (6%)
Query: 118 MSCVSIL---LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKA 173
+ C S+L L+ AY + L + A+ + + IP + Y ++KA +G L+KA
Sbjct: 823 LKCDSVLVSILLNAYSKAGLVEDAD-ALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKA 881
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ + GL PS Y++ I K G + A ++F+ +K QP + Y+ M+N
Sbjct: 882 IDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNC 941
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
Y K+ A LF M+ +P+ +Y L++A+AR G +AE++ ++ AG P
Sbjct: 942 YAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPS 1001
Query: 294 VYAYNALMEAY----------RLISRMHMGC-EPDRASYNIMVDAYGRAGL 333
+ L+ AY + RM P YN ++ A+ RA L
Sbjct: 1002 SVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARL 1052
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 14/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W + ++L + P V+ V +L++ YG+ AE + E+LD + P E
Sbjct: 256 WKEAQEFFAWMKLQLSYIPSVI---VYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEV 312
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ ++ Y + + ++ ++ M G+ PS+V Y + + L K A +++ +
Sbjct: 313 AFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDL 372
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + S Y LMI +Y K + AL++F M P+ Y +++ + G
Sbjct: 373 VEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRY 432
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPDRASYNIM 324
+EA ++F +Q + Y+Y ++ A + S M M C D Y +
Sbjct: 433 DEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSV 492
Query: 325 VDAYGRAGLHE 335
+ YG+AGL++
Sbjct: 493 ISIYGKAGLYD 503
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
YAL++ Y G E+A VF M G P +++YN + L K G +AV++F M
Sbjct: 383 AYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAM 442
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R S +Y M+++ KA K +A +F++M+ +C + YT++++ + + GL
Sbjct: 443 QRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLY 502
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIM 324
+EAE++F+++ + DV ++ + EA +++ + G D ++ +
Sbjct: 503 DEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTL 562
Query: 325 VDAYGRAG 332
+ Y +AG
Sbjct: 563 LHCYVKAG 570
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q+ + EF L IP+ Y++LLK Y + AEA F+EM L P V
Sbjct: 253 QQGWKEAQEFFAWMKLQLSYIPSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEV 312
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+++ I + + +++ M PS+ TYT M+ KA + A L+ ++
Sbjct: 313 AFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDL 372
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + Y ++ + + G EEA E+FE + GAG PD YN ++
Sbjct: 373 VEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVL 423
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+DL+ SV+L P+ L+I Y + ++A + +L + P
Sbjct: 369 WEDLVEESVEL------SPLAY-----ALMITIYRKLGRFEEALEVFEAMLGAGYYPDSL 417
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y ++L G ++A VF M++ L S Y + + K + A IF M
Sbjct: 418 IYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDM 477
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C YT +I++YGKA A KLF EM + ++ T++ + N + G
Sbjct: 478 QMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKY 537
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EA ++ E+L G+ D A+ L+ Y
Sbjct: 538 NEAVQVMEELLAKGLNLDDTAWKTLLHCY 566
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 6/199 (3%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D +V S +SI YG+ L+ +AE + E+ + R + T++++ +G +
Sbjct: 485 DEVVYTSVISI-----YGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNE 539
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A V E+ GL + + + +K GN ++A + F+ + Y M++
Sbjct: 540 AVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGI-ADLMAYNDMLS 598
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
LY + A LF +++S +P+ + +V + + AEE+ Q++ G P
Sbjct: 599 LYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTP 658
Query: 293 DVYAYNALMEAYRLISRMH 311
D L+ AY +R+
Sbjct: 659 DHITQGILINAYGEANRIE 677
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+YA +L + E A ++F +M+ P VVY S I K G +A ++FQ M
Sbjct: 453 SYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEM 512
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+T+++M N+ KA K A+++ E+ + + + L++ + + G
Sbjct: 513 NELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNV 572
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
E A + F+ L +GI D+ AYN ++ Y + +PD+ + M
Sbjct: 573 ERATKTFKTLVESGI-ADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTM 631
Query: 325 VDAYGRAGL 333
V Y A +
Sbjct: 632 VKLYCNANM 640
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 50/253 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY-CMS-GLLEKAEAVF-REM 180
+LI AYG+ + ++A LL++ E A + + Y C+ L +KA + R +
Sbjct: 665 ILINAYGEANRIEEAA----GLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLHRVL 720
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK- 239
+ L +A YN LK G A + RM+ T +I YGKA +
Sbjct: 721 ESFTLDSAA--YNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRY 778
Query: 240 -----------------SFMALKLFN------------EMRSHKCKPNICTYTALVNAFA 270
S M L N +MR K + + L+NA++
Sbjct: 779 EVLTKLKPELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYS 838
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRA 319
+ GL E+A+ + +G GI D+ AYN +++A R+ ++G P
Sbjct: 839 KAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQ 898
Query: 320 SYNIMVDAYGRAG 332
+Y+ M+ + ++G
Sbjct: 899 TYDTMISVFAKSG 911
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 106/254 (41%), Gaps = 48/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ Y + + + A+ + +L S P + + ++K YC + ++ AE V R+MR+ G
Sbjct: 596 MLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKG 655
Query: 185 LPP----SAVVYNSYID--------GLLKGGNPQKAVE------IFQRMKRDCCQPST-- 224
P ++ N+Y + GLL+ + E I+ +K +T
Sbjct: 656 FTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLL 715
Query: 225 -----ETYTLMINLYGKASKSFM-------ALKLFNEMRSHKCKPNICTYTALVNAFARE 272
E++TL Y + + +F+ A L + M+ T L+ A+ +
Sbjct: 716 LHRVLESFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKA 775
Query: 273 GLCEEAEE----------IFEQLQGAGIEPDVYAYNALMEAYRLISRM-HMGCEPDRASY 321
G E + ++ + GA I N L +A L+ +M +G + D
Sbjct: 776 GRYEVLTKLKPELPRNNFVYSSMVGALINC-----NQLEKAAGLVEKMRQIGLKCDSVLV 830
Query: 322 NIMVDAYGRAGLHE 335
+I+++AY +AGL E
Sbjct: 831 SILLNAYSKAGLVE 844
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++A+ + E+LD C+P Y +L+ + G +E A +FR M K G
Sbjct: 899 LIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEG 958
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y+ +D L G A+ F+ +K P Y LMIN G++ + AL
Sbjct: 959 IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEAL 1018
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF+EMR+ P++ TY AL+ G+ EEA +++E+LQ G+EP+V+ YNAL+ +
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGH 1078
Query: 305 RLISRMHMGCEPDRA 319
M PDRA
Sbjct: 1079 ------SMSGNPDRA 1087
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+I++ SL K + Y +L+ PT TY L+ G LE+A+ F EM
Sbjct: 862 NIVIFGLVKSNSLDKAIDL-YYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML 920
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
YG P+ +YN ++G K G+ + A E+F+RM ++ +P ++Y++M++ K
Sbjct: 921 DYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
AL F E++ P++ Y ++N R EEA +F++++ GI PD+Y YNAL+
Sbjct: 981 DALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALI 1040
Query: 302 ----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA ++ + + G EP+ +YN ++ + +G
Sbjct: 1041 LNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSG 1082
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 31/232 (13%)
Query: 131 QKSLHKKAEFTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLL 170
+ S HK TY+ LLD +P T+ +L+ A C G +
Sbjct: 324 KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKV 383
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
++A M+K G+ P+ YN+ I GLL+ +A+E+F M+ + + TY L
Sbjct: 384 DEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ YGK+ +S A+K F +M+++ PNI A + + A +G EEA+E F L+ G+
Sbjct: 444 IDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGL 503
Query: 291 EPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRA 331
PD YN LM Y +L+S M GC+P+ N ++D +A
Sbjct: 504 APDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKA 555
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L ++A G+ K+ Y E+L C P T+ +++ S L+KA ++ ++
Sbjct: 828 LFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG 887
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ Y IDGLLK G ++A + F+ M C P+ Y +++N +GK A
Sbjct: 888 DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETA 947
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF M +P++ +Y+ +V+ G ++A FE+L+ +G++PD+ YN ++
Sbjct: 948 CELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMING 1007
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA L M + G PD +YN ++ G AG+ E
Sbjct: 1008 LGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + L + A + ++ ++ C P TY L L A SG +++ ++ EM G
Sbjct: 794 LIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG 853
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ + +N I GL+K + KA++++ + P+ TY +I+ K + A
Sbjct: 854 CKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAK 913
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F EM + C PN Y L+N F ++G E A E+F ++ GI PD+ +Y+ +++
Sbjct: 914 QFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCL 973
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
++ ++ G +PD YN+M++ GR+
Sbjct: 974 CMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRS 1011
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 15/231 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
IL I+ YG+ KA T+ ++ + +P L + G LE+A+ F ++K
Sbjct: 441 ILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKK 500
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P A+ YN + K G A+++ M+ + C P +I+ KA +
Sbjct: 501 CGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDE 560
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A K+F M+ K P + TY L+ +EG +EA +F+ + P+ ++N L++
Sbjct: 561 AWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLD 620
Query: 303 ----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
A +++ RM M C PD +YN ++ YG + E + +Y+
Sbjct: 621 CLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVI--YGL--IKENRVNYAF 667
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 141 TYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+L+L S CI P+ + Y L+ + L E A +F +M+ G P YN ++D L
Sbjct: 774 VFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDAL 833
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G ++ ++++ M C+P+T T+ ++I K++ A+ L+ ++ S P
Sbjct: 834 GKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTP 893
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISR 309
TY L++ + G EEA++ FE++ G P+ YN LM + L R
Sbjct: 894 WTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRR 953
Query: 310 M-HMGCEPDRASYNIMVDAYGRAG 332
M G PD SY+IMVD G
Sbjct: 954 MVKEGIRPDLKSYSIMVDCLCMVG 977
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNP 205
DS IP L+K C G A VF ++ K + + PS YNS IDGLLK
Sbjct: 752 DSVLIP-------LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLT 804
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ A +F +MK C P TY L ++ GK+ K L+ EM CKPN T+ +
Sbjct: 805 EMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIV 864
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGC 314
+ + ++A +++ L P + Y L++ + R+ GC
Sbjct: 865 IFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC 924
Query: 315 EPDRASYNIMVDAYGRAGLHEGKC 338
P+ YNI+++ +G+ G E C
Sbjct: 925 MPNCPLYNILMNGFGKQGDVETAC 948
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+TY + K + G L +A +MRK G + Y I LLK G ++A+++++R
Sbjct: 158 NTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRR 217
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + +PS +TY+ ++ GK + L EM S +PNI T+T + R G
Sbjct: 218 MVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNI 323
+EA I +++ AG PDV Y L++A +++ E PDR +Y
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYIT 337
Query: 324 MVDAYGRAG 332
++D + G
Sbjct: 338 LLDKFSDHG 346
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY L + Y SG KA F +M+ G+ P+ V N+ + L + G ++A E F
Sbjct: 436 TAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFF 495
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+K+ P TY +++ YGKA + A+KL +EM + C P + +L++ +
Sbjct: 496 NGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKA 555
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASY 321
+EA ++F++++ + P V YN L+ EA L M C P+ S+
Sbjct: 556 DRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISF 615
Query: 322 NIMVDAYGRAG 332
N ++D + G
Sbjct: 616 NTLLDCLCKNG 626
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A A+ +L++ S P TY LL + G L+ + + EM
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V + ID L K G +A MK+ P+ TY +I + ++ A
Sbjct: 362 GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA---- 299
L+LFN M S + TY ++ + + G +A + FE+++ GI P++ A NA
Sbjct: 422 LELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYS 481
Query: 300 ------LMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L EA + + G PD +YNI++ YG+AG
Sbjct: 482 LAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAG 521
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ + ++ +G +++A + + M G P V Y ID L G A E+
Sbjct: 260 PNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKEL 319
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +MK +P TY +++ + + ++EM + P++ T+T L++A +
Sbjct: 320 FLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCK 379
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G +EA + ++ G+ P+++ YN L+ EA L + M +G E +
Sbjct: 380 VGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYT 439
Query: 321 YNIMVDAYGRAG 332
Y + +D YG++G
Sbjct: 440 YILFIDYYGKSG 451
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D+ C P TY +L+ A C +G L A+ +F +M+ P V Y + +D G+
Sbjct: 290 DAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLD 349
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
E + M+ D P T+T++I+ K K A + M+ PN+ TY L+
Sbjct: 350 AIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLI 409
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
R +EA E+F ++ G+E Y Y ++ Y
Sbjct: 410 CGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY 447
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
I LI + ++A Y ++ P+ TY+ L+ A +E + +EM
Sbjct: 196 IGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMES 255
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ + I L + G +A I +RM C P TYT++I+ A K
Sbjct: 256 LGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNN 315
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +LF +M++ KP+ TY L++ F+ G + +E + +++ G PDV + L++
Sbjct: 316 AKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILID 375
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMV 325
A + ++ G P+ +YN ++
Sbjct: 376 ALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLI 409
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ +G++ + A + ++ P +Y++++ CM G ++ A F E++
Sbjct: 933 ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V YN I+GL + ++A+ +F M+ P TY +I G A A
Sbjct: 993 GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
K++ E++ +PN+ TY AL+ + G + A +++++ G P+ + L
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ A E+ ++ C P L+ + +++A +F+ M++
Sbjct: 512 ILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEM 571
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ V YN+ + GL K G Q+A +F+ M D C P+T ++ +++ K + +A
Sbjct: 572 KLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLA 631
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LK+ M C P++ TY ++ +E A +F Q++ I PD
Sbjct: 632 LKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPD 680
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I G+ ++A + E+ + P TY L+ ++G++E+A ++ E++
Sbjct: 1003 LMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ YN+ I G GNP +A ++++M C+P+T T+ + N
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L++ S +E+A ++F EMR G+ P YN+ I L G ++A ++
Sbjct: 996 PDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKM 1055
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
++ ++ +P+ TY +I + + A ++ +M C+PN T+ L N
Sbjct: 1056 YEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 129/270 (47%), Gaps = 21/270 (7%)
Query: 87 DSLPPTHATWDDLINVSVQL----RLNKKWDPIVLMSCVSILL-----IEAYGQKSLHKK 137
D L P ++L+N+ ++ L + + + C ++ I+A + H
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 138 AEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
++ + + + + P+E TY++L+ YC + +EKA + EM + G PP Y S I
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ L K + A E+F+ +K + S+ Y +MI +GK K A+ LFNEM++
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISR 309
P++ Y AL++ + G+ EA + +++ G D+ ++N ++ + R I
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 310 M----HMGCEPDRASYNIMVDAYGRAGLHE 335
H G +PD +YN ++ + AG+ E
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 12/227 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A G+ + KA + + +C PT TY ++ G EK V+ EM G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 185 -LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P + Y++ I K G A+ +F MK +C QP+ + YT ++ +Y K K A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L LF EM+ C P + TYT L+ + G +EA ++ + G+ PDV N LM
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCS 339
E + S M M C P SYN ++ A + H + S
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS 394
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 112/226 (49%), Gaps = 9/226 (3%)
Query: 87 DSLPPTHATWDDLIN-------VSVQLRLNKKWDPIVLMSCVSIL--LIEAYGQKSLHKK 137
DS+ P+ T+ LI+ V L L ++ D C + LI A G+ ++
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + EL ++ + YA+++K + G L +A +F EM+ G P YN+ +
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G++K G +A + ++M+ + C+ ++ +++N + + A+++F ++ KP
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TY L+ FA G+ EEA + +++ G E D Y+++++A
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 47/192 (24%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE---------------------- 225
S V + + L + KA+ +F + K C+P++
Sbjct: 161 SPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVY 220
Query: 226 --------------TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
TY+ +I+ Y K ++ A++LF+EM+ + +P YT L+ + +
Sbjct: 221 TEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A ++FE+++ AG P VY Y L+ EAY M G PD
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVF 340
Query: 321 YNIMVDAYGRAG 332
N +++ G+ G
Sbjct: 341 LNNLMNILGKVG 352
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 17/259 (6%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVLMSCVSI-LLIEAYGQKSLHK-----KAEFTYLE 144
P T+ L+NV V K D IV MS + I AY ++L K +A +
Sbjct: 326 PNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCN 385
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ + +D Y +L++ C SG + +A + + + ++YN+ L +
Sbjct: 386 MWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQ 445
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+++++MK+D P TY ++I+ YG+A + A+K+F E+ + C+P++ +Y +
Sbjct: 446 VSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNS 505
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------G 313
L+N + G +EA F+++Q G+ PDV Y+ L+E + ++ M G
Sbjct: 506 LINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEG 565
Query: 314 CEPDRASYNIMVDAYGRAG 332
C P+ +YNI++D R+G
Sbjct: 566 CSPNLVTYNILLDCLERSG 584
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ +Y +G ++ A +F E+ P + YNS I+ L K G+ +A
Sbjct: 463 PDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMR 522
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY+ +I +GK K MA LF+EM + C PN+ TY L++ R
Sbjct: 523 FKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLER 582
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G EA +++ +L+ G+ PD Y L
Sbjct: 583 SGRTAEAVDLYAKLKQQGLTPDSITYAVL 611
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y LL+ Y +KA V+ +M + G +N +D L K KA ++F+ M
Sbjct: 190 SYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR C+P T TYT+MI + GKA K+ +L LF M N+ Y ++ A A+ +
Sbjct: 250 KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMA 309
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++A +F ++ G +P+ + Y+ L+
Sbjct: 310 DKAVLLFSKMVENGCQPNEFTYSVLLNV 337
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 43/252 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + KA + ++ C P TY ++++ +G +++ A+F+ M +
Sbjct: 228 MLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEK 287
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--------- 234
G + + YN+ I+ L KG KAV +F +M + CQP+ TY++++N+
Sbjct: 288 GFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKL 347
Query: 235 ---GKASKSFM--------------------ALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ SK +M A +LF M + K + Y +++ +
Sbjct: 348 DNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCS 407
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---YRLISRMH--------MGCEPDRAS 320
G EA ++ + I D YN + A + +S +H G PD +
Sbjct: 408 SGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFT 467
Query: 321 YNIMVDAYGRAG 332
YNI++ +YGRAG
Sbjct: 468 YNILISSYGRAG 479
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +YG+ A + EL +S C P +Y L+ +G +++A F+EM++
Sbjct: 470 ILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEK 529
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F M + C P+ TY ++++ ++ ++ A
Sbjct: 530 GLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEA 589
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +++ P+ TY L
Sbjct: 590 VDLYAKLKQQGLTPDSITYAVL 611
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
++K+GL +A Y + G L+ + KA ++ M R + ++++ K K
Sbjct: 179 VKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQK 238
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K+F +M+ C+P+ TYT ++ + G +E+ +F+ + G ++ AYN
Sbjct: 239 VDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNT 298
Query: 300 LMEAYR----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY--SLVELS 346
++EA L S+M GC+P+ +Y+++++ + EG+ + ++VE+S
Sbjct: 299 MIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVL----VAEGQLNKLDNIVEMS 354
Query: 347 VKH 349
K+
Sbjct: 355 KKY 357
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 112/211 (53%), Gaps = 14/211 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ +L+ C +G + A + +EM ++G+P + +++N I GL A+
Sbjct: 873 CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+F+ M+ C P TY+ +++ K+ K A +L +M S C PN+ TY++L++
Sbjct: 933 ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
+ G +EA + +++ +G P++ YN ++ EAY L+ M GC+P+
Sbjct: 993 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Query: 318 RASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
+Y +++DA+ + G E + LVE+ V+
Sbjct: 1053 VVTYTVLLDAFCKCGKAED--AIGLVEVMVE 1081
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ ++ + SG ++ A + +M G P+ V Y+S + GL K G +A
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ QRM R C P+ TY +I+ + K + A L EM C+PN+ TYT L++AF
Sbjct: 1004 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 1063
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
+ G E+A + E + G P+++ YN+L++ + +L+S M GC P+
Sbjct: 1064 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 1123
Query: 319 ASYNIMVDAYGRAG-LHEG 336
SYN ++ +A +HEG
Sbjct: 1124 VSYNTVIAGLCKATKVHEG 1142
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 12/225 (5%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
++C+S L I+A + + A+ + C P Y++L+ A C + L +AE+
Sbjct: 440 VACLSTL-IDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
M K P V YNS +DGL K A +F RM+ P TY+++I+ + K
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A K+ M+ KC P++ TY+AL+N + G ++A ++F+++ G G P++ Y
Sbjct: 559 NNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTY 618
Query: 298 NALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRA 331
N L++ I+++ C PD +Y +++ A
Sbjct: 619 NTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNA 663
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY+ LL C +G L++A A+ + M + G P+ V YN+ IDG K G
Sbjct: 973 DMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 1032
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A + + M CQP+ TYT++++ + K K+ A+ L M PN+ TY
Sbjct: 1033 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---------- 313
+L++ F ++ E A ++ + G P+V +YN ++ +++H G
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152
Query: 314 -CEPDRASYNIMVDA 327
C PD ++N ++DA
Sbjct: 1153 NCVPDIVTFNTIIDA 1167
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI A + +AE ++ +RC P TY ++ C S + A +F MR
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V Y+ I K N A ++ +RMK C P TY+ +IN KA A
Sbjct: 540 GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+F EM C PN+ TY L++ + E+A E+ E ++ PD Y L+
Sbjct: 600 FDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLING 659
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA+R++ M GC PDR +Y ++ A
Sbjct: 660 LCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D C P TY +LL A+C G E A + M + G P+ YNS +D K
Sbjct: 1043 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 1102
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A ++ M + C P+ +Y +I KA+K + L +M S+ C P+I T+
Sbjct: 1103 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--H 311
+++A + + A E+F +Q +G P++ YN+L+ +A L+ M
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222
Query: 312 MGCEPDRASYNIMVDA 327
GC PD +YN ++D
Sbjct: 1223 QGCSPDIITYNTVIDG 1238
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 12/192 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ + +G + A +F EM + GL A V+ S + GL G AV F+ M
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P + TY MIN K+ + A++L EM + PN+ +Y +++ F +
Sbjct: 223 SKTC-PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 281
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E A + EQ+ G PDV +Y ++ EA R++ +M GC+P+ +Y +
Sbjct: 282 ENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 341
Query: 325 VDAYGRAGLHEG 336
VD + R G +G
Sbjct: 342 VDGFCRVGDLDG 353
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 138 AEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ F LE + +++C+P TY+ L+ C +G ++KA VF+EM G P+ V YN+ I
Sbjct: 563 SAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLI 622
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K ++A E+ + M++ C P + TYT +IN AS+ A ++ EM+ C
Sbjct: 623 DGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCL 682
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
P+ TY L+ A + E E++ ++++
Sbjct: 683 PDRMTYGTLLRALQKTNNLELVEQLLKEMEAT 714
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++ S L+ A + EM G P+ YN+ + G K + A+
Sbjct: 226 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 285
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M C P +YT +IN K + A ++ ++M C+PN+ TY LV+ F
Sbjct: 286 WLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
R G + A E+ ++ G P+ YN +M A++++ M GC PD
Sbjct: 346 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDA 405
Query: 319 ASYNIMVDAYGRAG 332
+Y+ ++ + +AG
Sbjct: 406 INYSTIISGFCKAG 419
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D+ P +Y +L +C + +E A + +M G PP V Y + I+GL K
Sbjct: 255 EMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLD 314
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A + +M + CQP+ TY +++ + + A++L +M +PN TY
Sbjct: 315 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
+++ F R E A ++ + + G PD Y+ ++ EA+ L+ +M
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD A + ++DA +A
Sbjct: 435 GCRPDVACLSTLIDALCKAA 454
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY++++ ++C L+ A + M++ P V Y++ I+GL K G KA +
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+FQ M C P+ TY +I+ K +K A ++ MR C P+ TYT L+N
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM 312
EEA + +++ G PD Y L+ A + + + +
Sbjct: 662 NASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLEL 703
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+L++L P + TY++++ + C +++A V M K G P A+ Y + IDG K
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN KA+EI Q + P T+++ I+ K + A +L M P+ T
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y L+ F L E+A ++FE ++ G EPD Y L+
Sbjct: 1372 YNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY L+ +C G L+ A + R+M + G P+A+ YN+ + +
Sbjct: 325 KMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRN 384
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ ++A ++ Q M + C P Y+ +I+ + KA K A L +M C+P++ +
Sbjct: 385 DMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLS 444
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---------- 313
L++A + + A+E+ G PDV AY+ L+ A R+
Sbjct: 445 TLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKN 504
Query: 314 -CEPDRASYNIMVDA 327
C PD +YN +VD
Sbjct: 505 RCYPDVVTYNSVVDG 519
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ + +++ ++A ++ + C P Y+ ++ +C +G L +A + +M + G
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P ++ ID L K A E+ + C P Y+++I+ KA + A
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
+ M ++C P++ TY ++V+ + +A +F++++ AG+ PDV Y
Sbjct: 496 SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555
Query: 298 ---NALMEAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
N L A++++ RM C PD +Y+ +++ +AG
Sbjct: 556 CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNP 205
+S C P TY L+ C S ++AE + REM RK G P + YN+ IDGL K
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+A ++F +M D P TY+++I+ K A + M + P TY L
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 1305
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGC 314
++ F + G ++A EI + L G PDV ++ L +A L+ M G
Sbjct: 1306 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 1365
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
PD +YN ++ + A L E
Sbjct: 1366 VPDTVTYNTLLKGFCDASLTE 1386
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + ++A +++ C P + L+ A C + ++ A+ + R
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y+ I L K +A M ++ C P TY +++ K+ + A
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF+ MR+ P++ TY+ ++++F ++ + A ++ E+++ A PDV Y+AL+
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDA 327
+A+ + M GC P+ +YN ++D
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDG 624
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + +K ++A ++ C+P +Y ++ C + + + + +M
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V +N+ ID + K A E+F ++ C P+ TY +++ K+ + A
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L EM R C P+I TY +++ + + A ++F Q+ G+ PD Y+ ++
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 1273
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
EA ++ M G +P +Y ++D + + G + + LS YP
Sbjct: 1274 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 1332
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 49/187 (26%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS-------------- 238
N + LL+ P+ A+++++ + CC P+ T+T++I+ +A
Sbjct: 848 NCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPR 905
Query: 239 ---------------------KSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGLCE 276
K AL+LF EM S C P++ TY+ +V++ + G +
Sbjct: 906 HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 965
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
+A + E + G P+V Y++L+ EA L+ RM GC P+ +YN ++
Sbjct: 966 DACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 1025
Query: 326 DAYGRAG 332
D + + G
Sbjct: 1026 DGHCKLG 1032
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + KA + E+L C P TY L+ C +E+A + MRK
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P ++ Y I+GL ++A + + MK C P TY ++ K + +
Sbjct: 646 CTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVE 705
Query: 245 KLFNEMRS 252
+L EM +
Sbjct: 706 QLLKEMEA 713
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 115/296 (38%), Gaps = 74/296 (25%)
Query: 104 VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLE-LLDSRCIPTEDTYALLLK 162
+QL L+K P V+ + I + G+ L + E LE +L + +P TY LLK
Sbjct: 1322 LQLLLSKGSYPDVVTFSIFIDWLSKRGR--LRQAGEL--LETMLRAGLVPDTVTYNTLLK 1377
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL---------------------- 200
+C + L E A +F MR+ G P Y + + L+
Sbjct: 1378 GFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFK 1437
Query: 201 ------------------------------KGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
K G+PQ A ++F+ M Q + ++ M
Sbjct: 1438 LNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMD----QRNVVLWSAM 1493
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL-QGAG 289
+ +Y + A L+ M +P+ T+ +L+ GL + A + F + + G
Sbjct: 1494 LGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYG 1553
Query: 290 IEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+EP V ++ ++ EA L+ + M C+P A++N ++ AY G E
Sbjct: 1554 LEPGVDHFSCVIDLLGRLGLVNEAEDLM--LGMPCKPSAATWNCLLSAYKICGDFE 1607
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 45/180 (25%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR- 251
N ++ L+K +A ++F+ T TY+ +I+ + +A K A +LF+EM
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189
Query: 252 ---------------------------------SHKCKPNICTYTALVNAFAREGLCEEA 278
S C P+ TY ++N ++ ++A
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDA 249
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDA 327
+ E++ G P+V++YN ++ + +R+ GC PD SY +++
Sbjct: 250 IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVING 309
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
++ +L Y E+A ++R M G+ P AV + S + G AV+ F +
Sbjct: 1490 WSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSIS 1549
Query: 217 RD-CCQPSTETYTLMINLYGKASKSFMALKLFNE----MRSHKCKPNICTYTALVNAFAR 271
RD +P + ++ +I+L G+ L L NE M CKP+ T+ L++A+
Sbjct: 1550 RDYGLEPGVDHFSCVIDLLGR-------LGLVNEAEDLMLGMPCKPSAATWNCLLSAYKI 1602
Query: 272 EGLCEEAEEIFE 283
G E A + E
Sbjct: 1603 CGDFERALRVAE 1614
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 204 NPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+P A+ F+ + RD Q ++N+ KA + A LF + + TY
Sbjct: 105 DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTY 164
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM 312
+ L++ F R G A E+F+++ G++ + +++ +A M
Sbjct: 165 STLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK 224
Query: 313 GCEPDRASYNIMVDAYGRA 331
C PD +YN M++ ++
Sbjct: 225 TCPPDSVTYNTMINGLSKS 243
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 129/270 (47%), Gaps = 21/270 (7%)
Query: 87 DSLPPTHATWDDLINVSVQL----RLNKKWDPIVLMSCVSILL-----IEAYGQKSLHKK 137
D L P ++L+N+ ++ L + + + C ++ I+A + H
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 138 AEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
++ + + + + P+E TY++L+ YC + +EKA + EM + G PP Y S I
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ L K + A E+F+ +K + S+ Y +MI +GK K A+ LFNEM++
Sbjct: 452 NALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISR 309
P++ Y AL++ + G+ EA + +++ G D+ ++N ++ + R I
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 310 M----HMGCEPDRASYNIMVDAYGRAGLHE 335
H G +PD +YN ++ + AG+ E
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 12/227 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A G+ + KA + + +C PT TY ++ G EK V+ EM G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 185 -LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P + Y++ I K G A+ +F MK +C QP+ + YT ++ +Y K K A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LF EM+ C P + TYT L+ + G +EA ++ + G+ PDV N LM
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 304 YRLISRM--------HMG---CEPDRASYNIMVDAYGRAGLHEGKCS 339
+ R+ MG C P SYN ++ A + H + S
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS 394
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 113/226 (50%), Gaps = 9/226 (3%)
Query: 87 DSLPPTHATWDDLIN-------VSVQLRLNKKWDPIVLMSCVSIL--LIEAYGQKSLHKK 137
DS+ P+ T+ LI+ V L L ++ D C + LI A G+ ++
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + EL ++ + YA+++K + G L +A +F EM+ G P YN+ +
Sbjct: 463 ADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G++K G +A + ++M+ + C+ ++ +++N + + A+++F ++ KP
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TY L+ FA G+ EEA + +++ G E D Y+++++A
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 47/192 (24%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE---------------------- 225
S V + + L + KA+ +F + K C+P++
Sbjct: 161 SPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVY 220
Query: 226 --------------TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
TY+ +I+ Y K ++ A++LF+EM+ + +P YT L+ + +
Sbjct: 221 TEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A ++FE+++ AG P VY Y L+ EAY M G PD
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVF 340
Query: 321 YNIMVDAYGRAG 332
N +++ G+ G
Sbjct: 341 LNNLMNILGKVG 352
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 19/252 (7%)
Query: 109 NKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
NK P V+ +C + LI + + K A L +S + +Y +L+ YC SG
Sbjct: 107 NKGKSPDVI-ACTA--LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSG 163
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+E+A R + + G+ P+A Y++ + L G ++A+++ R + C P T T
Sbjct: 164 EIEEA---LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCT 220
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++I+ K S A+KLFNEMR+ CKP++ TY L+ F + G +EA ++L
Sbjct: 221 VLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSY 280
Query: 289 GIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGK 337
G +PDV ++N + M+A +L++ M GC P ++NI+++ + GL GK
Sbjct: 281 GCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLL-GK 339
Query: 338 CSYSLVELSVKH 349
+ +++E+ KH
Sbjct: 340 -ALNVLEMMPKH 350
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L S+C P T +L+ A C + +A +F EMR G P V YN I G KGG
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+A+ +++ CQP ++ +++ + A+KL M C P++ T+ L
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----GC 314
+N ++GL +A + E + G P+ ++N L++ + R I + + GC
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387
Query: 315 EPDRASYNIMVDAYGRAG 332
PD +YNI++ A + G
Sbjct: 388 YPDIVTYNILLTALCKDG 405
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 107 RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
+L K P V+ V LI+A ++S +A + E+ + C P TY +L+K +C
Sbjct: 207 QLQSKCYPDVVTCTV---LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCK 263
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
G L++A +++ YG P + +N + L GG A+++ M R C PS T
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVT 323
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ ++IN + AL + M H PN ++ L+ F + A E E +
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G PD+ YN L+ +A ++S++ GC P SYN ++D + G E
Sbjct: 384 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 443
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI QK L KA LE++ P ++ L++ +C +++A M
Sbjct: 326 ILINFLCQKGLLGKA-LNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVS 384
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P V YN + L K G AV I ++ C PS +Y +I+ K K+ +
Sbjct: 385 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAEL 444
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A++L EM KP++ T T++V +REG EA + F L+ I P+ + YN+++
Sbjct: 445 AVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIIT 504
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L + GC+P A+Y ++ GL E
Sbjct: 505 GLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAE 548
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YLE++ SR C P TY +LL A C G ++ A + ++ G PS + YN+ IDGLL
Sbjct: 378 YLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL 437
Query: 201 KGGNPQKAVEIFQRM-----------------------------------KRDCCQPSTE 225
K G + AVE+ + M KR +P+
Sbjct: 438 KVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAF 497
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
Y +I K+ ++ +A+ +M + CKP TYT L+ EGL E+A ++ +L
Sbjct: 498 IYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557
Query: 286 QGAGI 290
G+
Sbjct: 558 YSRGL 562
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 247 FNEMRSHKCK-PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
F E ++K K P++ TAL+ F + G + A +I L+ +G DV +YN L+
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYC 160
Query: 302 ------EAYRLISRMHMGCEPDRASYNIMV 325
EA R++ R MG P+ A+Y+ ++
Sbjct: 161 KSGEIEEALRVLDR--MGVSPNAATYDAVL 188
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C G +E+ V EM + G P V YN+ ++G K GN +A+ +
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVL 330
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P TYT +IN KA A++ F++M +PN TYT+L+N F++
Sbjct: 331 HSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQ 390
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
+G +EA I++++ +G P + YNAL+ + + RM G PD S
Sbjct: 391 KGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVS 450
Query: 321 YNIMVDAYGR 330
Y+ ++ + R
Sbjct: 451 YSTIIAGFCR 460
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ YC G +A + EM + GLPP V Y S I+ + K GN +A+E
Sbjct: 306 PDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF 365
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
F +M +P+ TYT +IN G + K FM A ++++EM P I TY AL+N
Sbjct: 366 FDQMHVRGLRPNGVTYTSLIN--GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGH 423
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
G EEA + ++G G+ PDV +Y+ ++ A+++ + M G PD
Sbjct: 424 CVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDA 483
Query: 319 ASYNIMVDA 327
+Y+ ++
Sbjct: 484 ITYSSLIQG 492
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ +RC+P TY ++ AYC +++A + R M GL P+ + YN I+GL + G
Sbjct: 228 EMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVG 287
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++ + M R P TY ++N Y K AL L +EM + P++ TYT
Sbjct: 288 RIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYT 347
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
+L+N + G A E F+Q+ G+ P+ Y +L+ EAYR+ M
Sbjct: 348 SLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS 407
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G P +YN +++ + +G E
Sbjct: 408 GFPPTIVTYNALLNGHCVSGRME 430
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 20/261 (7%)
Query: 87 DSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSIL--------LIEAYGQKSLHKK 137
+ LPP T+ LIN + LN+ + M + LI + QK +
Sbjct: 337 NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDE 396
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E++ S PT TY LL +C+SG +E+A + R M GL P V Y++ I
Sbjct: 397 AYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIA 456
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + +A ++ M P TY+ +I + + A LF EM + P
Sbjct: 457 GFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP 516
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TYT+L+N + +EG EA + +++ G PD YN L+ EA RL+
Sbjct: 517 DEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLL 576
Query: 308 SRMHMG-CEPDRASYNIMVDA 327
++ P+ +Y+ ++++
Sbjct: 577 LKLFYDESIPNGITYDTLIES 597
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
AE V+REM G+ + YN I G GN + + F+ M+R+ C P+ TY +I
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y K + A KL M +PN+ TY ++N R G EE + ++ G P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306
Query: 293 DVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
D YN L+ Y + H G PD +Y +++ +AG
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAG 357
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + +A + E+L + P TY L+ C +G L +A F +M G
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y S I+G + G +A I+ M R P+ TY ++N + + + A+
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M P++ +Y+ ++ F R + A ++ ++ G+ PD Y++L++
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
R++ C+ PD +Y +++ Y + G
Sbjct: 494 CEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEG 532
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDS--RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L + + S+ +K + + L D+ C + + L++K+ +EKA + +
Sbjct: 101 LAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKL 160
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P + YN+ +D +++ P E +++ M + +Y ++I + A
Sbjct: 161 NGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLE 220
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
M L+ F EM ++C PN+ TY ++ A+ + +EA ++ + G+EP++ YN ++
Sbjct: 221 MGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVI 280
Query: 302 EAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+ R+ G PD +YN +V+ Y + G
Sbjct: 281 NGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVG 322
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 32/252 (12%)
Query: 82 IWDAF--DSLPPTHATWDDLIN---VSVQLRL---------NKKWDPIVLMSCVSILLIE 127
IWD PPT T++ L+N VS ++ K P V+ +I
Sbjct: 400 IWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST---IIA 456
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
+ + +A E+++ P TY+ L++ C L +A +F+EM L P
Sbjct: 457 GFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP 516
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
Y S I+G K G+ +A+ + M + P T TY ++IN K +++ A +L
Sbjct: 517 DEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLL 576
Query: 248 NEMRSHKCKPNICTY---------------TALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
++ + PN TY AL+ F +GL EA+++FE + +P
Sbjct: 577 LKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKP 636
Query: 293 DVYAYNALMEAY 304
+ YN ++ +
Sbjct: 637 NEAVYNVIIHGH 648
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q+ L++ + + E+L+ +P E TY L+ YC G L +A + EM K G P V
Sbjct: 496 QRRLNEACDL-FQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTV 554
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN-------------LYGKA 237
YN I+GL K ++A + ++ D P+ TY +I + G
Sbjct: 555 TYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFC 614
Query: 238 SKSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K M A ++F M KPN Y +++ R+G +A ++++++ G P
Sbjct: 615 MKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTV 674
Query: 296 AYNALMEA 303
AL++A
Sbjct: 675 TIIALVKA 682
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY---------------ALLLKAYCMSG 168
+LI +++ ++A+ L+L IP TY L+K +CM G
Sbjct: 558 VLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
L+ +A+ VF M K P+ VYN I G + GN KA ++++ M P T T
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTII 677
Query: 229 LMIN-LYGKASKSFMALKLFNEMRSHKCKPNICTYT-ALVNAFAREGLCEEAEEIFEQLQ 286
++ LY + + L + + +RS CK + + ALV +EG + + ++
Sbjct: 678 ALVKALYSEGMDEQLNLVIRDILRS--CKLSDAELSKALVQINHKEGNIDAVFNLLTEMA 735
Query: 287 GAGIEP 292
G P
Sbjct: 736 KDGFLP 741
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 11/165 (6%)
Query: 86 FDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL 145
+D P T+D LI + I S V+ LI+ + K L +A+ + +
Sbjct: 581 YDESIPNGITYDTLI---------ESCSDIEFKSVVA--LIKGFCMKGLMNEADQVFESM 629
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
+ P E Y +++ +C G + KA +++EM +G P V + + L G
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMD 689
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
++ + + + R C E ++ + K L EM
Sbjct: 690 EQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEM 734
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y+ ++ + G ++K +F EM G+PP V Y + IDGL K +A
Sbjct: 199 CPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAE 258
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+FQ+M + +P+ +TY +I+ Y K +++ EM + KPN CTY +L+N
Sbjct: 259 AVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYL 318
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA F+ + G GI+P V Y ++ Y +S MH G P+
Sbjct: 319 CKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNH 378
Query: 319 ASYNIMVDAYGRAGL 333
+NI AY + G+
Sbjct: 379 HIFNIFFSAYAKCGI 393
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A F + ++ P+ TY ++L Y G L + + M G+ P+ ++N +
Sbjct: 325 REARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIF 384
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
K G KA++IF +M++ P +Y +I+ K + A FN+M +
Sbjct: 385 FSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
P+I +++LV E+ EE+F ++ GI P++ +N + ME R
Sbjct: 445 TPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQR 504
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAG 332
L+ + MG PD SYN ++D + AG
Sbjct: 505 LVDSIECMGVRPDVISYNTLIDGHCLAG 532
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y+++ +RC TY++L+ +C G LE A F + K G +V N ++GL
Sbjct: 87 YIKVAPNRC-----TYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCD 141
Query: 202 GGNPQKAVEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---CKP 257
G +A+++ QRM C P T +Y +++ ++ AL+L + M + C P
Sbjct: 142 GKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPP 201
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISR----- 309
N+ +Y+ ++N F EG ++ +F ++ GI PDV Y +++ +L R
Sbjct: 202 NVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261
Query: 310 ---MHMGCEPDRASYNIMVDAYGRAG 332
+ G +P+ +YN ++ Y G
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIG 287
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI- 123
A++ L + D + +W S PP ++ +IN + +++K ++ + M I
Sbjct: 181 AEEALELLHMMAD-DQVW----SCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIP 235
Query: 124 -------LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+I+ + L +AE + +++D+ P DTY L+ Y G ++ +
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRM 295
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
EM G P+ Y S ++ L K G ++A F M +PS TY +M L+G
Sbjct: 296 LEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIM--LHGY 353
Query: 237 ASKSFMA--LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
A+K ++ L N M ++ PN + +A+A+ G+ ++A +IF +++ G+ PD
Sbjct: 354 ATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDA 413
Query: 295 YAYNALMEA 303
+Y AL++A
Sbjct: 414 VSYGALIDA 422
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ AY + + KA + ++ P +Y L+ A C G ++ AE F +M
Sbjct: 383 IFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE 442
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P VV++S + GL +K E+F M P+ + ++ K +
Sbjct: 443 GVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEG 502
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L + + +P++ +Y L++ G +EA ++ E + G++PD ++YN L+
Sbjct: 503 QRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHG 562
Query: 304 Y 304
Y
Sbjct: 563 Y 563
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL YC +G ++ A + FR+M G+ P V YN+ + GL + +A E+
Sbjct: 551 PDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + TY +++N K++ A+K+F + S + NI T+ ++ A +
Sbjct: 611 YLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLK 670
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
G E+A ++F + G+ +V Y ++E L S M G P+
Sbjct: 671 GGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQ- 729
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELS 346
M++A R LH G S + LS
Sbjct: 730 ---MLNALVRRLLHRGDISRAGAYLS 752
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A ++FREM GL P V YN+ + GL + G +A E++ M Q + TY +
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
++N K++ A K+F + S + NI T+ ++ A + G E+A ++F + G
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926
Query: 290 IEPDVYAYNALME 302
+ PDV Y + E
Sbjct: 927 LVPDVVTYRLVAE 939
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 128 AYGQKSLHK--KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
YG ++ K K E + E+L+ P + +L C G + + + + + G+
Sbjct: 455 VYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGV 514
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + YN+ IDG G +A ++ + M +P + +Y +++ Y KA + A
Sbjct: 515 RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYS 574
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
F +M S+ P + TY +++ + EA+E++ + +G + D+Y YN ++
Sbjct: 575 HFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLC 634
Query: 302 ------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA ++ + G + + ++NIM+ A + G E
Sbjct: 635 KSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L P TY +L +G +A+ ++ M + YN ++GL K
Sbjct: 814 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCK 873
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A ++FQ + Q + T+ +MI K + A+ LF + ++ P++ T
Sbjct: 874 SNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 933
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
Y + EG EE + +F ++ +G D NAL+ RL+ R
Sbjct: 934 YRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVR--RLLQR 979
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q +A+ YL +++SR TY ++L C S +++A +F+ + GL + +
Sbjct: 838 QTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 897
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+N I LLKGG + A+++F + + P TY L+
Sbjct: 898 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLV 937
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 68/196 (34%), Gaps = 53/196 (27%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN---- 204
RC+ E A +A S L A +F E+ + P S V +N + + +
Sbjct: 11 RCLELERVIAD--RARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRST 68
Query: 205 ---PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ V +F RM RDC Y K PN CT
Sbjct: 69 TSESETVVSLFNRMVRDC-------YI-------------------------KVAPNRCT 96
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRM 310
Y+ L+ F R G E F + G D N L+ L+ RM
Sbjct: 97 YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRM 156
Query: 311 -HMGCEPDRASYNIMV 325
+GC PD SYNI++
Sbjct: 157 PELGCMPDTVSYNILL 172
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 88/154 (57%), Gaps = 2/154 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LLKA C SG ++ A AV REM +P + VYN IDG + G+ +A ++ Q+M
Sbjct: 681 TYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQM 740
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ QP TYT IN KA A K EM + KPN+ TYT L++ +A L
Sbjct: 741 NQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLP 800
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
E+A FE+L+ AG++PD Y+ LM + L+SR
Sbjct: 801 EKALSCFEELKLAGLKPDKAVYHCLMTS--LLSR 832
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A AVF ++ K GL P V+YN+ I GN +A+ + + M
Sbjct: 506 TYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 565
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ C+P++ T+ +I+ + +A + AL++F+ MR C P + T+ ALV +
Sbjct: 566 QKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKM 625
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A EI +++ AG+ PD + Y +M Y
Sbjct: 626 EKAVEILDEMALAGVSPDEHTYTTIMHGY 654
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ AYC + +++AEA+ REM + G+ +Y++ +DG N +K + +F+R+K
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
PS TY +IN+Y K K AL++ M+S K N+ TY+ L+N F +
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----HM-------GCEPDRASYNIMV 325
A +FE + G++PDV YN +++A+ + M HM C P ++ ++
Sbjct: 522 NAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPII 581
Query: 326 DAYGRAG 332
+ RAG
Sbjct: 582 HGFARAG 588
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 20/262 (7%)
Query: 91 PTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAEFT 141
P+ T+ LIN+ ++ +++K + +M V I +LI + + A
Sbjct: 467 PSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAV 526
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++ P Y ++KA+C G +++A + +EM+K P++ + I G +
Sbjct: 527 FEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFAR 586
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++A+EIF M+R C P+ T+ ++ + K A+++ +EM P+ T
Sbjct: 587 AGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHT 646
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA-- 319
YT +++ +A G +A E F +++ G++ DV+ Y AL++A RM R
Sbjct: 647 YTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMN 706
Query: 320 ---------SYNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 707 AQKIPRNTFVYNILIDGWARRG 728
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+ D S CIPT T+ L+ +EKA + EM G+ P Y + + G
Sbjct: 594 LEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHG 653
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G+ KA E F +M+ + Q TY ++ K+ + AL + EM + K N
Sbjct: 654 YAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRN 713
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLIS 308
Y L++ +AR G EA ++ +Q+ G++PD++ Y + ++ A + +
Sbjct: 714 TFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTME 773
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAGLHEGKCS 339
M G +P+ +Y ++ + A L E S
Sbjct: 774 EMEAAGVKPNVKTYTTLIHGWANASLPEKALS 805
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY Q +AE E+ + D Y ++ Y M EK VF+ +++ G
Sbjct: 405 IIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECG 464
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN------------ 232
PS + Y I+ K G KA+E+ + MK + + +TY+++IN
Sbjct: 465 FAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAF 524
Query: 233 ----------------LYGKASKSF-------MALKLFNEMRSHKCKPNICTYTALVNAF 269
LY K+F A+ + EM+ +C+P T+ +++ F
Sbjct: 525 AVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGF 584
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
AR G A EIF+ ++ +G P V+ +NAL+ +A ++ M + G PD
Sbjct: 585 ARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDE 644
Query: 319 ASYNIMVDAYGRAG 332
+Y ++ Y G
Sbjct: 645 HTYTTIMHGYAALG 658
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++ Y G + +A F MR G+ PS+ VY S I G + ++A+
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++M + + S TY++++ + K + A F + + N Y ++ A+ +
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQ 411
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
+ AE + +++ GI+ + Y+ +M+ Y +I G P +
Sbjct: 412 ACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVIT 471
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 472 YGCLINMYTKIG 483
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 2/193 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L++ Y ++ +A T+ E + +R I P+ Y L+ AY + +E+A + R+M +
Sbjct: 299 LMVGYYARRGDMHRARQTF-ESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNE 357
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ S V Y+ + G K GN + A F++ K + Y +I Y +A
Sbjct: 358 EGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDR 417
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L EM + Y +++ + E+ +F++L+ G P V Y L+
Sbjct: 418 AEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLIN 477
Query: 303 AYRLISRMHMGCE 315
Y I ++ E
Sbjct: 478 MYTKIGKVSKALE 490
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+K+ PS + LM+ Y + A + F MR+ P+ YT
Sbjct: 278 NWQAVVSAFERIKK----PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYT 333
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L++A+A EEA ++ GIE + Y+ ++ +
Sbjct: 334 SLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGF 374
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + A C +G + +A EM G+ P+ Y + I G P+KA+
Sbjct: 747 PDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSC 806
Query: 212 FQRMKRDCCQPSTETYT-LMINLYGKAS 238
F+ +K +P Y LM +L +A+
Sbjct: 807 FEELKLAGLKPDKAVYHCLMTSLLSRAT 834
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + KKA F + +++ P TY L C SG L+ A + EM + G
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + YN+ ++GL K GN +AV++ + MK P T TYT +++ Y K + A
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L EM +P + T+ L+N G E+ E + + + GI P+ YN++M+ Y
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRA 331
+ + M + E PD +YNI++ + +A
Sbjct: 471 CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + E++ P E TY L+ YC G ++KA + +M + GL P+ V Y +
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALA 327
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K G A E+ M R Q + TY ++N KA A+KL EM+
Sbjct: 328 DGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLH 387
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P+ TYT L++A+ + G +A E+ ++ G++P V +N LM + RL
Sbjct: 388 PDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL 447
Query: 307 ISRM-HMGCEPDRASYNIMVDAY 328
+ M G P+ A+YN ++ Y
Sbjct: 448 LKWMLEKGIMPNAATYNSIMKQY 470
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 21/232 (9%)
Query: 112 WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLE 171
+ I+L+ C S ++E G+K L E++ P Y L+ +C G +
Sbjct: 183 YSSIILLLCKSGKVVE--GEKVLR--------EMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
A +F EM + P ++ +++ I GL G +A ++F M + +P TYT +I
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ Y K + A L N+M PN+ TYTAL + + G + A E+ ++ G++
Sbjct: 293 DGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352
Query: 292 PDVYAYNA----------LMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ YN +++A +L+ M G PD +Y ++DAY + G
Sbjct: 353 LNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTG 404
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
CIP +Y ++ YC G L+K + +EM+ GL P+ Y+S I L K G +
Sbjct: 141 CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGE 200
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ + M + P YT +I+ + K + A KLF+EM + + P+ ++AL+
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
+ G EA+++F ++ G EPD Y AL++ Y + M +G P+
Sbjct: 261 SGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320
Query: 319 ASYNIMVDAYGRAG 332
+Y + D ++G
Sbjct: 321 VTYTALADGLCKSG 334
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 12/225 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + + A + E+ +P ++ L+ SG + +A+ +F EM K G
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y + IDG K G +KA + +M + P+ TYT + + K+ + A
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +EM + NI TY +VN + G +A ++ E+++ AG+ PD Y LM+AY
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG-LHEGK 337
M G +P ++N++++ +G L +G+
Sbjct: 401 YKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C TE +Y +L+ + G + +A + M G P V Y + IDG G QK V
Sbjct: 107 CWNTE-SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVV 165
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ + M+ +P+ TY+ +I L K+ K K+ EM P+ YT L++ F
Sbjct: 166 QLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGF 225
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ G + A ++F +++ I PD A++AL+ EA +L + M G EPD
Sbjct: 226 CKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDE 285
Query: 319 ASYNIMVDAYGRAG 332
+Y ++D Y + G
Sbjct: 286 VTYTALIDGYCKLG 299
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + KA E+LD PT T+ +L+ CMSG LE E + + M + G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A YNS + N + + EI++ M P + TY ++I + KA A
Sbjct: 456 IMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAW 515
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L EM + +Y AL+ F + EA ++FE+++ G+ YN ++
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQR 214
+ + + +GLL +A F ++ YG+ SA N Y+ L + V ++F
Sbjct: 41 VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+ +TE+Y +++N + K A L M C P++ +YT +++ + G
Sbjct: 101 FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGE 160
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNI 323
++ ++ +++Q G++P++Y Y++++ E +++ M G PD Y
Sbjct: 161 LQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTT 220
Query: 324 MVDAYGRAG 332
++D + + G
Sbjct: 221 LIDGFCKLG 229
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 7/143 (4%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ +P TY ++K YC+ + + ++R M G+ P + YN I G K N
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A + + M + +Y +I + K K A +LF EMR + Y
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNL 570
Query: 265 LVNAFAREG-------LCEEAEE 280
V+ EG LC+EA E
Sbjct: 571 FVDMNYEEGNMETTLELCDEAIE 593
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + K+A F + E+++ R T +Y L+K + L +A +F EMR+
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRRE 559
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
GL SA +YN ++D + GN + +E+ C
Sbjct: 560 GLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKC 595
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LLKA C SG ++ A AV REM +P + VYN IDG + G+ +A ++ Q+M
Sbjct: 660 TYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM 719
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K++ QP TYT IN KA A K EM + KPN+ TYT L++ +A L
Sbjct: 720 KQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLP 779
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
E+A FE+++ AG++PD Y+ LM + L+SR
Sbjct: 780 EKALRCFEEMKLAGLKPDKAVYHCLMTS--LLSR 811
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A VF ++ K GL P V+YN+ I GN +A+ + + M
Sbjct: 485 TYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 544
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ +P++ T+ +I+ + +A + AL++F+ MR C P + T+ ALV +
Sbjct: 545 QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQM 604
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A EI +++ AG+ PD + Y +M Y
Sbjct: 605 EKAVEILDEMALAGVSPDEHTYTTIMNGY 633
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ R PT T+ ++ + +G + +A +F MR+ G P+ +N+ + GL++
Sbjct: 543 EMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKR 602
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+KAVEI M P TYT ++N Y + A + F ++R+ + ++ TY
Sbjct: 603 QMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYE 662
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
AL+ A + G + A + ++ I + + YN L+ EA L+ +M
Sbjct: 663 ALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQE 722
Query: 313 GCEPDRASYNIMVDAYGRAG--LHEGKCSYSLVELSVK 348
G +PD +Y ++A +AG L K + L VK
Sbjct: 723 GVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVK 760
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+ D S CIPT T+ L+ +EKA + EM G+ P Y + ++G
Sbjct: 573 LEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNG 632
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G+ KA E F +++ + + TY ++ K+ + AL + EM + N
Sbjct: 633 YAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRN 692
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLIS 308
Y L++ +AR G EA ++ +Q++ G++PD++ Y + ++ A + I
Sbjct: 693 TFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQ 752
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAGLHE 335
M +G +P+ +Y ++ + A L E
Sbjct: 753 EMEALGVKPNVKTYTTLIHGWACASLPE 780
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 156 TYALLLKAYCMSGL------LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
TY++++ + G +++AE++ REM + G+ +Y++ ++G GN +K +
Sbjct: 374 TYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCL 433
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+R+K PS +Y +IN+Y K K AL++ M S K N+ TY+ L+N F
Sbjct: 434 IVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGF 493
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----HMGCE-------PDR 318
+ A +FE + G++PDV YN +++A+ + M HM E P
Sbjct: 494 LKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTS 553
Query: 319 ASYNIMVDAYGRAG 332
++ ++ + RAG
Sbjct: 554 RTFMPIIHGFARAG 567
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++ Y M G EK VF+ +++ G PS + Y I+ K G KA+E+ +
Sbjct: 414 DIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKM 473
Query: 215 MKRDCCQPSTETYTLMIN----------------------------LYGKASKSF----- 241
M+ + + +TY+++IN LY K+F
Sbjct: 474 MESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGN 533
Query: 242 --MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A+ + EM+ + +P T+ +++ FAR G A EIF+ ++ +G P V+ +NA
Sbjct: 534 MDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNA 593
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ +A ++ M + G PD +Y +++ Y G
Sbjct: 594 LVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALG 637
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L++ Y G + +A F MR G+ PS+ VY S I G + ++A+
Sbjct: 300 PARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSC 359
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM------ALKLFNEMRSHKCKPNICTYTAL 265
++MK + + S TY++++ + K + A L EM I Y +
Sbjct: 360 VRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTM 419
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMV 325
+N + G E+ +F++L+ G P V +Y L+ Y + ++ E + M+
Sbjct: 420 MNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSK-----MM 474
Query: 326 DAYGRAGLHEGKCSYSLV 343
++ AG+ +YS++
Sbjct: 475 ES---AGIKHNMKTYSML 489
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+K+ P+ + LM+ Y + A + F MR P+ YT
Sbjct: 286 NWQAVVSAFERIKK----PARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYT 341
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS--- 320
+L++A+A EEA +++ G+E + Y+ ++ + I C DRA
Sbjct: 342 SLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLV 401
Query: 321 --------------YNIMVDAYGRAGLHEGKC 338
Y+ M++ Y G +E KC
Sbjct: 402 REMEEEGIDAPIDIYHTMMNGYTMIG-NEEKC 432
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + A C +G + +A +EM G+ P+ Y + I G P+KA+
Sbjct: 726 PDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRC 785
Query: 212 FQRMKRDCCQPSTETY-TLMINLYGKAS 238
F+ MK +P Y LM +L +A+
Sbjct: 786 FEEMKLAGLKPDKAVYHCLMTSLLSRAT 813
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +++L+K+A + E+ S P + T+ LL Y + ++A V +EM + G
Sbjct: 249 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVG 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PPS V YNS I +K G ++AV + Q M+ +P TYT +I+ +A K A+
Sbjct: 309 CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAI 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++EM + CKPN+CTY AL+ G E +F++L+ AG PD+ +N L+
Sbjct: 369 VEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVF 428
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R +Y ++ +Y R GL +
Sbjct: 429 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 46/253 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ H +A E+ C P+ TY L+ +Y GLLE+A A+ +EM G
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y + I GL + G A+ + M R+ C+P+ TY +I ++G K +
Sbjct: 344 IKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 245 KLFNEMRSHKCKPNICT-----------------------------------YTALVNAF 269
+F+E+RS P+I T Y +L++++
Sbjct: 404 AVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 463
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+R GL + A +I++++ AGI PDV YNA++ +A +L + M C+PD
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 319 ASYNIMVDAYGRA 331
SY+ ++ AY A
Sbjct: 524 YSYSSLLHAYANA 536
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKY 183
L+ A+ + + A + ++DS P TY ++L Y M+ ++ + M+++
Sbjct: 178 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH 237
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I + ++A ++F MK +P T+ ++++YGKA + A
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ EM C P++ TY +L++++ ++GL E+A + ++++ GI+PDV Y L+
Sbjct: 298 IEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISG 357
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
++ GC+P+ +YN ++ +G G
Sbjct: 358 LDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRG 397
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 54/269 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ L + + E+ + IP DTY L+ +Y GL + A +++ M + G
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS------ 238
+ P YN+ + L +GG ++A ++F M+ C+P +Y+ +++ Y A
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMK 543
Query: 239 ------------------KSFM-----------ALKLFNEMRSHKCKPNICTYTALVNAF 269
K+ + A K F E+R +C +I A+V+ +
Sbjct: 544 ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIY 603
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
+ + + E+I ++ + I YN+LM Y L G PDR
Sbjct: 604 GKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDR 663
Query: 319 ASYNIMVDAYGRAG--------LHEGKCS 339
SYN ++ AYGR G E KCS
Sbjct: 664 YSYNTVIYAYGRKGQMKEASRLFSEMKCS 692
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 9/230 (3%)
Query: 90 PPTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEF 140
PP+ T++ LI+ +V L+ + I LI + A
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y E++ + C P TY L+K + + G + AVF E+R G P V +N+ +
Sbjct: 370 EYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFG 429
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + +F+ MK+ P +TY +I+ Y + +A++++ M P++
Sbjct: 430 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVS 489
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
TY A+++A AR G E+AE++F +++ +PD Y+Y++L+ AY R+
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRL 539
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ L ++A VF EM+ G P V +NS +D K +A+E+
Sbjct: 241 PDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEV 300
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M+R C PS TY +I+ Y K A+ L EM KP++ TYT L++ R
Sbjct: 301 IQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDR 360
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G + A ++++ G +P++ YNAL++ + + + G PD +
Sbjct: 361 AGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVT 420
Query: 321 YNIMVDAYGRAGL 333
+N ++ +G+ GL
Sbjct: 421 WNTLLAVFGQNGL 433
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE + E+ + C P E +Y+ LL AY + L+K +A+ ++ + P + +
Sbjct: 505 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 564
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K N +A + F +++ C M+++YGK K+ + M+
Sbjct: 565 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 624
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+ TY +L++ ++R G CE+ E I +++ +G+ PD Y+YN ++ AY R
Sbjct: 625 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 684
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
L S M G +PD +YNI V +Y + E
Sbjct: 685 LFSEMKCSGLKPDVVTYNIFVKSYVSNSMFE 715
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE +LEL RC + ++ Y + ++ K E + M++ + SA YNS +
Sbjct: 576 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLM 635
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G+ +K I +K +P +Y +I YG+ + A +LF+EM+ K
Sbjct: 636 HMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLK 695
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P++ TY V ++ + EEA E+ + G +P+ YN+++E Y
Sbjct: 696 PDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + EL + +P T+ LL + +GL + VF+E
Sbjct: 384 CTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 443
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+K G P Y S I + G A++I++RM P TY +++ + +
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY---- 295
A KLF EM CKP+ +Y++L++A+A ++ + + + + IEP +
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 296 ------AYNALMEAYRLISRMHMG-CEPDRASYNIMVDAYGR 330
N L EA + + C D N MV YG+
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 605
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG+ + +K E + +S + TY L+ Y G EK E + E++ G
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 658
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ I + G ++A +F MK +P TY + + Y S A+
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 718
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+L M + CKPN TY ++V + R G +A+ L
Sbjct: 719 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
P+ YTALV+AF+R G +A +F ++ +G++P + YN ++ Y
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L++ M G PDR +YN ++ R L++
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYK 260
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 43/261 (16%)
Query: 88 SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
++PP+ +T+++LIN A G K+A ++ +
Sbjct: 227 AIPPSRSTYNNLIN--------------------------ACGSSGNWKEALNVCKKMTE 260
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ P T+ ++L AY K + F M+ + P N I L+K G K
Sbjct: 261 NGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGK 320
Query: 208 AVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A++IF MK R C P T+T +I+LY + FN M + KPNI +Y AL
Sbjct: 321 AIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNAL 380
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHM 312
+ A+A G+ +EA +F +++ G PDV +Y +L+ AY L+ R H
Sbjct: 381 IGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNH- 439
Query: 313 GCEPDRASYNIMVDAYGRAGL 333
C+P+ SYN ++DAYG GL
Sbjct: 440 -CKPNLVSYNALIDAYGSKGL 459
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F ++ S C P T+ ++ Y + G +E + F M GL P+ V YN+ I
Sbjct: 325 FNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAY 384
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G ++A +F +K++ P +YT ++N YGK+ K A+K+F MR + CKPN+
Sbjct: 385 ASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNL 444
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+Y AL++A+ +GL EA EI +++ G++P++ + L+ A
Sbjct: 445 VSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ + A ++L + P+ TY L+ A SG ++A V ++M + G
Sbjct: 203 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENG 262
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +N + +G K + F+ MK +P T T ++I K ++ A+
Sbjct: 263 VGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAI 322
Query: 245 KLFNEMRSHK--CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+FN M+ + C P++ T+T +++ ++ G E + F + G++P++ +YNAL+
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIG 382
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
EA+ + + + G PD SY +++AYG++G E
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ AY G+ ++A +VF E++K G P V Y S ++ K G P+KA+++
Sbjct: 372 PNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKV 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R+ C+P+ +Y +I+ YG A+++ +EM + +PNI + L+ A R
Sbjct: 432 FELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGR 491
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G + + + + GI+ + AYN+ + +Y + +PD +
Sbjct: 492 CGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVT 551
Query: 321 YNIMVDA 327
YN+++
Sbjct: 552 YNVLISG 558
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 101/253 (39%), Gaps = 46/253 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + K+A + E+ + P +Y LL AY SG EKA VF MR+
Sbjct: 380 LIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNH 439
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP---------------------- 222
P+ V YN+ ID G +AVEI M+R+ QP
Sbjct: 440 CKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIK 499
Query: 223 -------------STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+T Y I Y + AL L+ MR+ K KP+ TY L++
Sbjct: 500 SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGC 559
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
+ EA +++ I Y++++ EA + ++M M GC PD
Sbjct: 560 CKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
Query: 319 ASYNIMVDAYGRA 331
+Y M+ AY A
Sbjct: 620 ITYTAMIHAYDVA 632
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 25/253 (9%)
Query: 96 WDD---LINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
WDD L+N V R ++K P+++ I +E H F +++ + C
Sbjct: 110 WDDVEGLLNRWVG-RFSRKNFPLLIREITQIGSLE-------HSVQVFRWMKNQKNYC-A 160
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
D Y ++++ + ++++A +F EM+K+ P A YN+ I+ + G + A+ I
Sbjct: 161 RNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIM 220
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M R PS TY +IN G + AL + +M + P++ T+ +++A+ R
Sbjct: 221 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRG 280
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDRA 319
+ FE ++G I PD N + ++ + + C PD
Sbjct: 281 NQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVV 340
Query: 320 SYNIMVDAYGRAG 332
++ ++ Y G
Sbjct: 341 TFTTIIHLYSVCG 353
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + +Y G +KA +++R MR + P V YN I G K +A+ M
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
S E Y+ +I Y K + A +F +M+ C+P++ TYTA+++A+ E
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A +F +++ ++PD A ++LM A+
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAF 664
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 203 GNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G+ + +V++F+ MK ++ C + Y +MI L+ + + A LF EM+ +CKP+
Sbjct: 140 GSLEHSVQVFRWMKNQKNYC-ARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAE 198
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
TY AL+NA R G A I + + A I P YN L+ EA + +M
Sbjct: 199 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 258
Query: 311 -HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
G PD ++NI++ AY R + SY
Sbjct: 259 TENGVGPDLVTHNIVLSAYKRGNQYSKVLSY 289
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I +Y + KA Y + + P TY +L+ C +A EM +
Sbjct: 521 IGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKI 580
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P S VY+S I K G +A +F +MK C+P TYT MI+ Y A A
Sbjct: 581 PLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASA 640
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREG 273
LF EM + +P+ ++L+ AF + G
Sbjct: 641 LFLEMETDDVQPDSIACSSLMRAFNKGG 668
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY ++ +AE + ++ C P TY ++ AY ++ EKA A+F EM
Sbjct: 590 VICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDD 649
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEI--FQRMKR------------DCC---------- 220
+ P ++ +S + KGG P K + + F R K+ C
Sbjct: 650 VQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREII 709
Query: 221 ------QPSTETYTL-----MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+PS ++ +++ GK+ K +KLF ++ + + N TY+ L+
Sbjct: 710 GLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNL 769
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G + E+ + ++ AG++P V Y ++
Sbjct: 770 LAAGNWRKYIEVLQWMEEAGLQPSVGMYRSI 800
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D + +++ Y+ ++ AY G + +AE++F +M+ G P + Y + I
Sbjct: 574 EMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAE 633
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +KA +F M+ D QP + + ++ + K + L L MR K N ++
Sbjct: 634 NWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFF 693
Query: 264 ALVNA 268
+V+A
Sbjct: 694 EMVSA 698
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A++ + E+ C PT TY L+ AY + + +A +F M
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ V Y + +DGL K GN KA E++ ++ R P+ TY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A +L + M S C+PN Y AL++ F + G + A+E+F Q+
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442
Query: 288 AGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G P V+ Y +L++ A +++S+M C P+ +Y M+D R G E
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S C P Y L+ +C +G ++ A+ VF +M K G PS Y S ID + K G
Sbjct: 405 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 464
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ +M +D C P+ TYT MI+ + +S ALKL + M C PN+ TYTA
Sbjct: 465 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 524
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L++ + G + + ++F Q+ G P+ Y L+
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 36/233 (15%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P TY+ ++ C + +EKA +F+EM+ G+ P Y ID K G
Sbjct: 213 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 272
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F+ M+ C P+ TYT +I+ Y KA + A +F+ M C+PN TY
Sbjct: 273 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 332
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG----------------IEPDVYAYNALME----- 302
ALV+ + G +A E++ +L G + P+V Y AL++
Sbjct: 333 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 392
Query: 303 -----AYRLISRM-HMGCEPDRASYNIMVDAYGRAG---------LHEGKCSY 340
A+ L+ M GCEP+ Y+ ++D + +AG L KC Y
Sbjct: 393 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 445
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + ++ A + M G P+ +VY++ IDG K G A E+
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M + PS TYT +I+ K + +A+K+ ++M C PN+ TYTA+++ R
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G E+A ++ ++ G P+V Y AL++ + L ++M GC P+ +
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y ++++ AGL + K L E+ ++P
Sbjct: 557 YRVLINHLCAAGLLD-KARLLLGEMKQTYWP 586
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + C+ + A + C G +KA + +EM + G P Y+ I
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +KA +FQ MK P TYT++I+ + KA A LF EMRS C P
Sbjct: 232 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TYTAL++A+ + +A +IF ++ AG P+ Y AL++
Sbjct: 292 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 337
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 27/235 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM---- 180
LI AY + +A + ++D+ C P + TY L+ C +G + KA V+ ++
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358
Query: 181 ------------RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
++ L P+ V Y + +DGL K A E+ M C+P+ Y
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ + KA K A ++F +M P++ TYT+L++ ++G + A ++ Q+
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
P+V Y A+++ A +L+S M GC P+ +Y ++D G+AG
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 533
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ +L++ +P+ TY L+ G L+ A V +M K
Sbjct: 420 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 479
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDGL + G +KA+++ M+ C P+ TYT +I+ GKA K ++L
Sbjct: 480 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 539
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF +M C PN TY L+N GL ++A + +++ + Y ++ +
Sbjct: 540 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 599
Query: 305 --RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
I+ + + G P Y +++D + +AG
Sbjct: 600 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 636
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 150 CIPTEDTYALLLKAYC------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
C P Y + + + C LL+ AE ++ EM + V ++ L G
Sbjct: 143 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 202
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++ + M R P T TY+ +I A+K A LF EM+ P++ TYT
Sbjct: 203 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 262
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
L+++F + GL E+A+ +FE+++ G P V Y AL+ AY + RM
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC P+ +Y +VD +AG
Sbjct: 323 GCRPNDVTYGALVDGLCKAG 342
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ CIP TY LL + L + + M G P+ ++NS + +
Sbjct: 71 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 130
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASK------SFMALKLFNEMRSHKCKPNICT 261
A ++ RM C P Y + I K +A K++ EM + C N
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 190
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
G ++A ++ +++ G PD Y+ ++ +A+ L M
Sbjct: 191 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250
Query: 312 M-GCEPDRASYNIMVDAYGRAGLHE 335
M G PD +Y I++D++ +AGL E
Sbjct: 251 MVGVTPDVYTYTILIDSFCKAGLIE 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR--MKRDCCQPSTETYTLMINLYGKA 237
M + G + L K G A+++ +R K D T T MI+ +A
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLD-----TVLCTHMISGLMEA 55
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
S A+ + MR + C PN+ TY L++ F ++ + I + G P+ +
Sbjct: 56 SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLF 115
Query: 298 NALME----------AYRLISRMHM-GCEPDRASYNIMV 325
N+L+ AY+L++RM GC P YNI +
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 154
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 35/167 (20%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAE---------------------------------AV 176
C P TY +L+ C +GLL+KA +
Sbjct: 550 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 609
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--DCCQPSTETYTLMINLY 234
EM YG P A VY ID K G + A+E+ + M + + Y +I
Sbjct: 610 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 669
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
AS+ A +L++EM P + + L+ +EA ++
Sbjct: 670 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 16/229 (6%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+SC +++ A +++ E+ Y E++ + P T+ +++ A C +G + KA V
Sbjct: 189 LSCKPLMI--ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246
Query: 178 REMRKYGLPPSAVVYNSYIDGLLK-GGNPQ--KAVEIFQRMKRDCCQPSTETYTLMINLY 234
+M+ YG P+ V YN+ IDG K GGN + KA + + M + P+ T+ ++I+ +
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K ++K+F EM KPN+ +Y +L+N G EA + +++ AG++P++
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 295 YAYNALMEAY----RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
YNAL+ + L + M G P YN+++DAY + G
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCM---SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
C P +Y L+ YC +G + KA+AV +EM + + P+ +N IDG K N
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
++++F+ M +P+ +Y +IN K A+ + ++M S +PN+ TY AL+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCE 315
N F + + +EA ++F ++G G P YN L++AY + ++ G
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 316 PDRASYNIMVDAYGRAG 332
PD +YN ++ R G
Sbjct: 434 PDVGTYNCLIAGLCRNG 450
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 13/221 (5%)
Query: 125 LIEAY---GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
LI+ Y G KA+ E++++ P T+ +L+ + L + VF+EM
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ P+ + YNS I+GL GG +A+ + +M QP+ TY +IN + K
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
AL +F ++ P Y L++A+ + G ++ + E+++ GI PDV YN L+
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 302 ----------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
A +L ++ PD +++I+++ Y R G
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKG 484
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + + + E+LD P +Y L+ C G + +A ++ +M
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ + YN+ I+G K ++A+++F +K P+T Y ++I+ Y K K
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG---------------- 287
L EM P++ TY L+ R G E A+++F+QL
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGY 480
Query: 288 ------------------AGIEPDVYAYNALMEAY------RLISRMHMGCEPDR----- 318
G++P YN +M+ Y + + M E +R
Sbjct: 481 CRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 319 -ASYNIMVDAYGRAG 332
ASYN+++ Y + G
Sbjct: 541 VASYNVLLQGYSQKG 555
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L S+ +P T+ +L++ YC G KA + +EM K GL P + YN + G K GN
Sbjct: 462 LTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 206 QKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ A + +M+++ + + +Y +++ Y + K A L NEM PN TY
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Query: 265 LVNAFAREGLCEEAE 279
+ +G + E
Sbjct: 582 VKEEMVDQGFVPDIE 596
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F + + D+ C+ + L+L AY + E F+ YG SA+ + L
Sbjct: 140 FHAISMCDNVCVNSIIADMLVL-AYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIAL 198
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
LK +++ M R QP+ T+ ++IN K K A + +M+ + C PN+
Sbjct: 199 LKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV 258
Query: 260 CTYTALVNAFAR---EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
+Y L++ + + G +A+ + +++ + P++ +N L++ + ++
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAG 332
M +P+ SYN +++ G
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGG 345
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK- 182
+L+E Y +K +KA E+ P TY +++K YC G L+ A + +M K
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
L + YN + G + G + A + M P+ TY ++
Sbjct: 535 RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ TY +L+KA C GL++KA +F EM G P+ Y IDGL + G ++A
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M +D PS TY +IN Y K + A +L M CKPN+ T+ L+
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDR 318
R G +A + +++ G+ PD+ +YN L++ AY+L+S M+ EPD
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 319 ASYNIMVDAYGRAG 332
++ +++A+ + G
Sbjct: 477 LTFTAIINAFCKQG 490
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A + L KA + E++ C P TY +L+ C G +E+A V R+M K
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ PS + YN+ I+G K G A E+ M++ C+P+ T+ ++ + K + A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L M + P+I +Y L++ REG A ++ + IEPD + A++ A
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 304 Y 304
+
Sbjct: 486 F 486
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y++L+ C G LE+A + +M + G PS Y I L G KA
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M C+P+ TYT++I+ + K A + +M + P++ TY AL+N +
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
++G A E+ ++ +P+V +N LME A L+ RM G PD
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 319 ASYNIMVDAYGRAG 332
SYN+++D R G
Sbjct: 442 VSYNVLIDGLCREG 455
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
LL +C L A VF M K P++V Y+ I GL + G ++A + +M
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
CQPST TYT++I A LF+EM CKPN+ TYT L++ R+G EEA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 279 EEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDA 327
+ ++ I P V YNAL+ A+ L++ M C+P+ ++N +++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 328 YGRAG 332
R G
Sbjct: 416 LCRVG 420
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A F L+ R + T + ++L +++ A+ ++ K G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L PS V Y + +DGL++ G+ + I + MK C P+ YT++IN + + A
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL + M+ PN TYT +V + G + A E + G E + Y++L++ +
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 305 RL 306
L
Sbjct: 697 VL 698
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ ++ A+C G + A A M + G+ V + IDG+ K G + A+ I + +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + + +++++ K K L + ++ P++ TYT LV+ R G
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+ I E ++ +G P+VY Y ++ EA +L+S M G P+ +Y +M
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 325 VDAYGRAG 332
V Y G
Sbjct: 658 VKGYVNNG 665
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F L +++ R C P T+ L++ C G KA + + M GL P V YN IDG
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L + G+ A ++ M +P T+T +IN + K K+ +A M +
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
T T L++ + G +A I E L I ++ N ++ E ++
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+++ +G P +Y +VD R+G G S+ ++EL
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITG--SFRILEL 606
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E T L+ C G A + + K + + N +D L KG ++ + +
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
++ + PS TYT +++ ++ + ++ M+ C PN+ YT ++N + G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA 319
EEAE++ +Q +G+ P+ Y +++ Y ++ E RA
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L +A ++ C P +Y LL +C +++A M
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L K G + AVEI ++ C P TY +I+ KA K+ A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+KL +EMR+ KP+ TY++LV +REG +EA + F + + G+ P+ +N++M
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528
Query: 302 -----EAYR----LISRMHMGCEPDRASYNIMVDAYGRAGL 333
+ R L+ ++ GC+P SY I+++ G+
Sbjct: 529 LCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGM 569
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 16/221 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI + + +KA LE+L+ S +P TY +++ YC +G + A +V M
Sbjct: 143 LIRGFCRMGKTRKAA-KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 198
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P V YN+ + L G ++A+E+ RM + C P TYT++I + S A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQA 258
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL--- 300
+KL +EMR C P++ TY LVN +EG +EA + + +G +P+V +N +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 301 -------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
M+A +L++ M G P ++NI+++ R GL
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S C P T+ ++L++ C +G AE + +M + G PS V +N I+ L + G +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A++I ++M + CQP++ +Y +++ + K K A++ M S C P+I TY ++
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEP 316
A ++G E+A EI QL G P + YN +++ A +L+ M +P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 317 DRASYNIMVDAYGRAG 332
D +Y+ +V R G
Sbjct: 483 DTITYSSLVGGLSREG 498
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A +L C P TY +L++A C + +A + EMR G P V YN
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G+ K G +A++ M CQP+ T+ +++ + A KL +M
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------- 304
P++ T+ L+N R+GL A +I E++ G +P+ +YN L+ +
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 305 ---RLISRMHMGCEPDRASYNIMVDAYGRAG 332
R++SR GC PD +YN M+ A + G
Sbjct: 401 YLERMVSR---GCYPDIVTYNTMLTALCKDG 428
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 12/236 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEA + S +A E+ D C P TY +L+ C G L++A +M
Sbjct: 244 ILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N + + G A ++ M R PS T+ ++IN + A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ + +M H C+PN +Y L++ F +E + A E E++ G PD+ YN ++
Sbjct: 364 IDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
+A +++++ GC P +YN ++D +AG GK L E+ K
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG-KTGKAIKLLDEMRAK 478
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YLE + SR C P TY +L A C G +E A + ++ G P + YN+ IDGL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE----------- 249
K G KA+++ M+ +P T TY+ ++ + K A+K F+E
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAV 520
Query: 250 ------------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M + CKP +YT L+ A EG+ +EA E+ +L
Sbjct: 521 TFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 286 QGAGI 290
G+
Sbjct: 581 CNKGL 585
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
K M H P+I T L+ F R G +A +I E L+G+G PDV YN ++
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMIS 180
Query: 303 AY----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y ++ RM + PD +YN ++ + +G
Sbjct: 181 GYCKAGEINNALSVLDRMSV--SPDVVTYNTILRSLCDSG 218
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
V N+++ L++ G ++ + + M P T +I + + K+ A K+
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
+ P++ TY +++ + + G A + +++ + PDV YN ++
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGK 219
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+A ++ RM C PD +Y I+++A R
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++DS C+P T+ L+ A C LE+A + RE+ GL P+ +N I+ L K G
Sbjct: 361 QMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVG 420
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+P AV +F+ MK C P TY ++I+ + K AL L EM C + TY
Sbjct: 421 DPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYN 480
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
+++ + EEAEE+F+Q+ GI + +N L+ +A L+ +M
Sbjct: 481 TIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISE 540
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ +YN ++ Y + G
Sbjct: 541 GLQPNNVTYNSILTHYCKQG 560
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT T +L+ YC G + A ++ G P V ++++++GL + G+ A+
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ M ++ C+P TY+ +IN + A + N+M C P+ T+ L+ A
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDR 318
E EEA ++ +L G+ P+VY +N L+ A + H+ GC PD
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441
Query: 319 ASYNIMVDAYGRAG 332
+YNI++D +G
Sbjct: 442 VTYNILIDNLCSSG 455
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ S C P E TY +L+ C SG L KA + +EM G P S V YN+ IDGL K
Sbjct: 429 FEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCK 488
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M + T+ +I+ A + A +L ++M S +PN T
Sbjct: 489 RRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVT 548
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y +++ + ++G +A +I + + G E DV Y L+ A +L+ M
Sbjct: 549 YNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMR 608
Query: 312 M-GCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
M G +P +YN ++ + R + G+ + SL
Sbjct: 609 MKGMKPTPKAYNPVIQSLFRG--NNGRDALSL 638
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + S K E Y E+ P T+ ++ A C + A + EM
Sbjct: 167 LLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD 226
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + + ++G ++ G+ + A+ + RM C P++ T ++IN Y K + AL
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ + +P+ T++ VN + G + A ++ + G EPDVY Y+ ++
Sbjct: 287 GYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCL 346
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA ++++M GC PD ++N ++ A
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ C + ++ A + +M GL P+ V YNS + K GN KA +I Q M
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +IN KA ++ ALKL MR KP Y ++ + R
Sbjct: 573 TANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG 632
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
+A +F ++ G PD + Y + +R + R G P + +++ +V+
Sbjct: 633 RDALSLFREMTEVGGPPDAFTYKIV---FRGLCR---GGGPIKEAFDFLVE 677
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D P+ D Y +++ +G + + + EMR+ G + S+I +
Sbjct: 83 DDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFD 142
Query: 207 KAVEIF-QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A ++ ++ Q +TE Y ++ + + SK + + EM S +P++ T+ +
Sbjct: 143 DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTV 202
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGC 314
++A R A + E++ + PD + LME + RL +RM MGC
Sbjct: 203 IDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGC 262
Query: 315 EPDRASYNIMVDAY---GRAG 332
P + N++++ Y GR G
Sbjct: 263 SPTSVTVNVLINGYCKLGRVG 283
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 12/195 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+ Y LL ++ E+ + EM G+ P V +N+ ID L + + AV + +
Sbjct: 162 EVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEE 221
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P T+T ++ + + AL+L M C P T L+N + + G
Sbjct: 222 MSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGR 281
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNI 323
+A +Q G EPD ++ + A +++ M GCEPD +Y+
Sbjct: 282 VGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYST 341
Query: 324 MVDAYGRAG-LHEGK 337
+++ G L E K
Sbjct: 342 VINCLCNNGELEEAK 356
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L YC G + KA + + M G V Y + I+GL K Q A+++
Sbjct: 544 PNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKL 603
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +P+ + Y +I + + AL LF EM P+ TY + R
Sbjct: 604 LRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCR 663
Query: 272 -EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G +EA + ++ G P+ ++ L E
Sbjct: 664 GGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 11/168 (6%)
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
V ++ +G+ + VYN + L +G + + M +P T+ +I+
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+A ++ A+ + EM S P+ T+T L+ F EG E A + ++ G P
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267
Query: 296 AYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
N L+ Y + R + G EPDR +++ V+ + G
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNG 315
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 196 IDGLLKGGNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ L + +P+ A+ + + D PS + Y +I G A + L EMR
Sbjct: 60 VTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRRE 119
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIF-EQLQGAGIEPDVYAYNALMEAYRLISRMHM 312
+ + + + ++AR L ++A ++ QL G++ + YN L+ S++ +
Sbjct: 120 GHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKL 179
Query: 313 -----------GCEPDRASYNIMVDAYGRA 331
G EPD ++N ++DA RA
Sbjct: 180 LESAYTEMSSQGIEPDVVTFNTVIDALCRA 209
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W D+ V L + K D I L LI + +L+K+A + E+ + P +
Sbjct: 230 WKDV----VALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKV 285
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ LL Y + + ++A V +EM G PPS V YNS I +K G ++A E+ + M
Sbjct: 286 TFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEM 345
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ QP TYT +I+ +A K A+ ++EM + CKPN+CTY AL+ G
Sbjct: 346 EVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKF 405
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
E +F+ L+ AG PDV +N L+ E + M G P+R +Y +
Sbjct: 406 PEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSL 465
Query: 325 VDAYGRAGLHE 335
+ +Y R GL +
Sbjct: 466 ISSYSRCGLFD 476
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ L + + E+ S +P DTY L+ +Y GL +++ +++ M + G
Sbjct: 430 LLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG 489
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK--SFM 242
+ P YN+ + L +GG ++A ++F M+ C+P +Y+ +++ Y A K
Sbjct: 490 IYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMK 549
Query: 243 AL---------------------------------KLFNEMRSHKCKPNICTYTALVNAF 269
AL K F E+ +C +I A+V+ +
Sbjct: 550 ALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVY 609
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
+ + ++ EEI ++G+ I YN+LM Y L G PDR
Sbjct: 610 GKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDR 669
Query: 319 ASYNIMVDAYGRAG 332
SYN M+ AYGR G
Sbjct: 670 YSYNTMIYAYGRKG 683
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 47/228 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN-----------------S 194
P Y L+ A+ + A AVFR M G+ P+ V YN +
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 195 YIDGLLKGGNP-------------------QKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+D + G P ++A ++F M+ +P T+ ++++YG
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
KA A+ + EM C P++ TY +L++++ ++GL +EA E+ E+++ GI+PDV
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVI 355
Query: 296 AYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
Y L+ + + GC+P+ +YN ++ +G G
Sbjct: 356 TYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRG 403
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY E+L + C P TY L+K + + G + AVF ++R G P V +N+ +
Sbjct: 376 TYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFG 435
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + +F+ MK+ P +TY +I+ Y + +++++ M P+I
Sbjct: 436 QNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDIS 495
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY A+++A AR G E+AE++F +++ PD +Y++L+ AY
Sbjct: 496 TYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAY 539
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM------RKYGLPPSA 189
++AE + E+ + C P E +Y+ LL AY + L+K +A+ ++ +GL +
Sbjct: 511 EQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTL 570
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
V+ NS ++ L +KA F + R C M+++YGK ++ +
Sbjct: 571 VLVNSKVNNL---SETEKA---FLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSL 624
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----- 304
M+ + TY +L++ ++R G CE+ E I +++ +G PD Y+YN ++ AY
Sbjct: 625 MKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQ 684
Query: 305 -----RLISRMH-MGCEPDRASYNIMVDAY 328
RL S M G PD +YNI V +Y
Sbjct: 685 MKEASRLFSEMKSSGLIPDIVTYNIFVKSY 714
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ E +LEL RC + ++ Y + +++K E + M+ + S YNS +
Sbjct: 582 ETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLM 641
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G+ +K I +K +P +Y MI YG+ + A +LF+EM+S
Sbjct: 642 HMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLI 701
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P+I TY V ++ + EEA ++ + G +P+ YN++++ Y
Sbjct: 702 PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEY 749
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + +L + +P T+ LL + +GL + VF+E
Sbjct: 390 CTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKE 449
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+K G P Y S I + G +++EI++RM P TY +++ + +
Sbjct: 450 MKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGR 509
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF EM + C+P+ +Y++L++A+A ++ + + E + IE +++
Sbjct: 510 WEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIE----SHHG 565
Query: 300 LMEAYRLISR------------MHMG---CEPDRASYNIMVDAYGR 330
L++ L++ + +G C D N MV YG+
Sbjct: 566 LVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGK 611
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG+ + KK E + S + TY L+ Y G EK E + E++ G
Sbjct: 605 MVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSG 664
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ I + G ++A +F MK P TY + + Y S A+
Sbjct: 665 ARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAI 724
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
L M + CKPN TY +++ + R G +A+ L
Sbjct: 725 DLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNL 765
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 47/127 (37%)
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP----------------------- 292
+P+ YTALV+AF+R +A +F ++ GI+P
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 293 -------------DVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAY 328
D Y YN L+ EA ++ M G EPD+ ++N ++D Y
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 329 GRAGLHE 335
G+A +H+
Sbjct: 295 GKARMHD 301
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + L ++ +++D C P YA +L C G LE A + M YG
Sbjct: 266 LIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYG 325
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ + GL ++A E+ M + C T+ ++++ + + + +
Sbjct: 326 LKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVI 385
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +M H C P++ TYT ++N F +EGL +EA + + + G P+ +Y ++
Sbjct: 386 ELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGL 445
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A L+S+M GC P+ ++N +++ + GL E
Sbjct: 446 CSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVE 487
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + AE + +M + G
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L N M + PN Y+++ +A ++EG ++F+ +Q I D YNA++
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A ++ M GC P+ ++Y I++ G
Sbjct: 586 CKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGF 625
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E+ D+ C + T+ +L+ +C +GL+ + + +M ++G P + Y +
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A L ++M C
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGC 466
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ ++N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 467 SPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALE 526
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A + G
Sbjct: 527 LLNVMVNKGMSPNTIIYSSIASALSKEG 554
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P T+ L+ C +GL E+ V +M +G P +Y + +DG+ K G
Sbjct: 250 EMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEG 309
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + A EI RM +P+ Y ++ A + A +L EM + C + T+
Sbjct: 310 HLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFN 369
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
LV+ F + GL E+ EQ+ G PDV Y ++ EA L+ M
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429
Query: 313 GCEPDRASYNIMV 325
GC P+ SY I++
Sbjct: 430 GCRPNTISYTIVL 442
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +LK CM+ + + + EM + G PP+ V +N+ I L + G ++
Sbjct: 221 CDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVH 280
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M C P Y +++ K +A ++ + M S+ KPN+ Y ++
Sbjct: 281 QVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGL 340
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-------AYRLISRMHM----GCEPDR 318
E+AEE+ ++ D +N L++ YR+I + GC PD
Sbjct: 341 CSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDV 400
Query: 319 ASYNIMVDAYGRAGL 333
+Y +++ + + GL
Sbjct: 401 ITYTTVINGFCKEGL 415
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++++ C P T+ ++ C GL+E+A + ++M G P + Y++ ID
Sbjct: 454 AEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVID 513
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE-------- 249
GL K G +A+E+ M P+T Y+ + + K + +++F+
Sbjct: 514 GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRS 573
Query: 250 ---------------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
M S C PN TYT L+ A EG +EA+E+
Sbjct: 574 DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEML 633
Query: 283 EQLQGAG 289
+L G
Sbjct: 634 TELCSKG 640
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 23/197 (11%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G L A R +PP+A Y + L G A+ + M+
Sbjct: 86 YNAMVSGYCRAGQLASAR---RLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 217 RDCCQPSTETYTLMINLYGKASKSFM-----ALKLFNEMRSHKCKPNICTYTALVNAFAR 271
R C P Y ++ L S+ A+++ ++ C ++ ++NA
Sbjct: 143 RRGCAPIPPMYHVI--LEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCD 200
Query: 272 E-GLCEEAEEIFEQLQGA-GIEPDVYAYNALMEAYRLISR-----------MHMGCEPDR 318
+ G +EA + L + G +PDV +YNA+++ + R + +GC P+
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260
Query: 319 ASYNIMVDAYGRAGLHE 335
++N ++ R GL E
Sbjct: 261 VTFNTLIGYLCRNGLFE 277
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 16/197 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP---QKA 208
P TY +++A C G + A +V EMR+ G P +Y+ ++ G + A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEM-RSHKCKPNICTYTALV 266
V + Q + C L++N S AL+L ++ S C P++ +Y A++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+++ E++ G P+V +N L+ ++++++M GC
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292
Query: 316 PDRASYNIMVDAYGRAG 332
PD Y ++D + G
Sbjct: 293 PDIRMYATVLDGVCKEG 309
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ TY +L+KA C GL++KA +F EM G P+ Y IDGL + G ++A
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M +D PS TY +IN Y K + A +L M CKPN+ T+ L+
Sbjct: 357 GVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDR 318
R G +A + +++ G+ PD+ +YN L++ AY+L++ M+ EPD
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDC 476
Query: 319 ASYNIMVDAYGRAG 332
++ +++A+ + G
Sbjct: 477 LTFTAIINAFCKQG 490
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A + L KA + E++ C P TY +L+ C G +E+A V R+M K
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS + YN+ I+G K G A E+ M++ C+P+ T+ ++ + K + A
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L M + P+I +Y L++ REG A ++ + +EPD + A++ A
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485
Query: 304 Y 304
+
Sbjct: 486 F 486
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL-PPSAVVYNSYIDGLLKGG 203
LLDS + + LL +C L A VF M + G P++V Y+ I GL + G
Sbjct: 227 LLDSHIVTS------LLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVG 280
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A + +M CQPST TYT++I A LF+EM + CKPN+ TYT
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYT 340
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
L++ R+G EEA + ++ GI P V YNAL+ A+ L++ M
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400
Query: 313 GCEPDRASYNIMVDAYGRAG 332
C+P+ ++N +++ R G
Sbjct: 401 ACKPNVRTFNELMEGLCRVG 420
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + A F L+ R + T + ++L L++ A+ ++ K G
Sbjct: 517 LIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG 576
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L PS V Y + +DGL++ G+ + + + MK C P+ YT++IN + + A
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL + M+ PN TYT +V + G + A E + G E + Y++L+ +
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696
Query: 305 RL 306
L
Sbjct: 697 VL 698
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ ++ A+C G + A A M + G+ V + IDG+ G + A+ I + +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETL 537
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + + +++++ K K L + ++ P++ TYT LV+ R G
Sbjct: 538 VKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+ + E ++ +G P+VY Y ++ EA +L+S M G P+ +Y +M
Sbjct: 598 SGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 325 VDAYGRAG 332
V Y G
Sbjct: 658 VKGYVNNG 665
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 14/218 (6%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F L +++ R C P T+ L++ C G KA + + M GL P V YN IDG
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L + G+ A ++ M +P T+T +IN + K K+ +A M +
Sbjct: 451 LCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
T T L++ G +A I E L + ++ N ++ E ++
Sbjct: 511 EVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLG 570
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+++ +G P +Y +VD R+G G S+ ++EL
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDISG--SFRMLEL 606
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E T L+ C G A + + K + + N +D L KG ++ + +
Sbjct: 511 EVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLG 570
Query: 214 RMKRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
++ + PS TYT +++ G S SF L+L M+ C PN+ YT ++N
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLEL---MKLSGCLPNVYPYTIIINGLC 627
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA 319
+ G EEAE++ +Q +G+ P+ Y +++ Y ++ E RA
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L +A ++ C P +Y LL +C +++A M
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L K G AVE+ ++ C P TY +I+ K K+ A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
++L +EMR KP++ TY++L+ +REG EEA + F ++G G++P+ + YN++M
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A ++ M GC+P SY I+++ GL
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGL 346
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L+ C P TY +L++A C + +A + EM G P V YN ++G+ K G
Sbjct: 8 LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL 67
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+A++ M QP+ T+ +++ + A KL EM C P++ T+ L
Sbjct: 68 DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNIL 127
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----GC 314
+N R+GL A +I E++ G P+ +YN L+ + R I + + GC
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187
Query: 315 EPDRASYNIMVDAYGRAG 332
PD +YN M+ A + G
Sbjct: 188 YPDIVTYNTMLTALCKDG 205
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E++ C P+ T+ +L+ C GLL +A + +M +G P+++ YN +
Sbjct: 105 AEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLH 164
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K +A++ + M C P TY M+ K K A++L N++ S C P
Sbjct: 165 GFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSP 224
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TY +++ ++ G ++A E+ +++G G++PDV Y++L+ EA +
Sbjct: 225 VLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFF 284
Query: 308 SRMH-MGCEPDRASYN 322
+ G +P+ +YN
Sbjct: 285 HDVEGFGVKPNAFTYN 300
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++L++ C +G AE + EM + G PS V +N I+ L + G +A++I
Sbjct: 84 PNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDI 143
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++M C P++ +Y +++ + K K A++ M S C P+I TY ++ A +
Sbjct: 144 LEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCK 203
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
+G + A E+ QL G P + YN ++ +A L+ M G +PD +
Sbjct: 204 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVIT 263
Query: 321 YNIMVDAYGRAG 332
Y+ ++ R G
Sbjct: 264 YSSLIAGLSREG 275
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+E+ R C P TYT++I S A+KL +EM S CKP++ TY LVN
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPD 317
+EG +EA + + G +P+V +N + M+A +L++ M GC P
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 318 RASYNIMVDAYGRAGL 333
++NI+++ R GL
Sbjct: 121 VVTFNILINFLCRKGL 136
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YLE++ SR C P TY +L A C G ++ A + ++ G P + YN+ IDGL
Sbjct: 178 YLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 237
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE----------- 249
K G +AVE+ M+ +P TY+ +I + K A+K F++
Sbjct: 238 KVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAF 297
Query: 250 ------------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M S CKP +YT L+ A EGL +EA E+ +L
Sbjct: 298 TYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357
Query: 286 QGAGI 290
G+
Sbjct: 358 CSRGV 362
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ C PT TY ++ AY + L +A VF EM+K G P V Y + ID KGG
Sbjct: 391 EMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGG 450
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A++++ RM+ P T TY+ M+N GK A KLF EM + C PN+ TY
Sbjct: 451 YLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYN 510
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
++ A+ E ++++ +Q AG PD Y+ +M EA + M
Sbjct: 511 IMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHD 570
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 571 WAPDEPVYGLLVDLWGKAG 589
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ FQ +KR QP +YT MI + G+A + KL +EM S CKP + TY
Sbjct: 349 ALGFFQWLKR---QPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYN 405
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
+++A+ R EA ++FE++Q AG EPD Y L++ A L +RM +
Sbjct: 406 RIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEV 465
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y+ MV+ G+ G
Sbjct: 466 GLSPDTFTYSAMVNCLGKGG 485
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 45/259 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AYG+ + ++A + E+ + P TY L+ + G LE A ++ M++ G
Sbjct: 407 IIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVG 466
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y++ ++ L KGG+ A ++F M + C P+ TY +MI L KA +
Sbjct: 467 LSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVV 526
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA---------------- 288
KL+ +M+ +P+ TY+ ++ G +EAE +F +++
Sbjct: 527 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWG 586
Query: 289 ------------------GIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRA 319
G++P+V N+L+ A+ I+R G P
Sbjct: 587 KAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQ 646
Query: 320 SYNIMVDAYGRAGLHEGKC 338
+Y +++ A G C
Sbjct: 647 TYTLLLSCCTEAQAQMGLC 665
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G +AE ++E+ P E Y LL+ + +G ++KA + M +
Sbjct: 546 IVMEVLGHCGHLDEAEAVFIEMRHDWA-PDEPVYGLLVDLWGKAGNVDKALGWYHAMLQD 604
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ NS + LK Q A + Q M PS +TYTL+++
Sbjct: 605 GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLS 653
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 154/347 (44%), Gaps = 37/347 (10%)
Query: 25 GKLRSFNHKKLS-------RKRCGSLRGKGWKYGSGFVDGIFPVLSPT-AQQILRFVQRE 76
GK R+F H + CG L G+ WK V V+ P ++++ + +
Sbjct: 86 GKRRNFEHDLTTYMPLIRCLDDCG-LFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKA 144
Query: 77 VDSNTIWDAFDSLP-----PTHATWDDLINVSVQLRLNKKWDPIVLMSC----------V 121
N F + PT +T++ +I + +Q ++K + C
Sbjct: 145 KMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMT 204
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L+ A+ + A + E+ + PT Y LL Y SG EKA + +EM+
Sbjct: 205 YSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMK 263
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P+ Y I GL K G + A +F M +D C+P +IN++GKA +
Sbjct: 264 DKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLE 323
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
ALKLF++MRS KC PN+ TY ++ A F + EA FE+++ G+ P + Y+ L
Sbjct: 324 DALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSIL 383
Query: 301 MEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEG 336
++ + +R+ G P A+Y +++A G+A +E
Sbjct: 384 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 430
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY++L+ +C + +EKA + EM + G PP Y S I+ L K + A E+
Sbjct: 375 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 434
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K +C + S Y +MI GK + A+ LFNEM+ C P++ Y AL++ R
Sbjct: 435 FLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVR 494
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
G+ EEA ++ G PD+ ++N ++ R E PD S
Sbjct: 495 AGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVS 554
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ + R+G+ E
Sbjct: 555 YNTILGSLSRSGMFE 569
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 94/179 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ ++ A +LEL ++ + YA+++K G +A +F EM+K G
Sbjct: 418 LINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIG 477
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + GL++ G ++A + M+ + C P ++ +++N + + A
Sbjct: 478 CNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQAT 537
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F +M+ KP+ +Y ++ + +R G+ EEA ++ ++ G E D Y++++EA
Sbjct: 538 EMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEA 596
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ G+ +A + E+ C P Y L+ +G++E+A + R M +
Sbjct: 452 VMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEEN 511
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P +N ++GL + G P++A E+F +MK +P +Y ++ ++ A
Sbjct: 512 GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEA 571
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAR 271
KL EM S + + TY++++ A +
Sbjct: 572 AKLMREMGSRGFEYDHITYSSILEAVGK 599
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 144/330 (43%), Gaps = 43/330 (13%)
Query: 34 KLSRKRCGSL------RGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFD 87
+LSR R + R K W+ F+ L P +FV +D + +
Sbjct: 88 RLSRTRVKKMNKLALKRAKDWRERVKFLTDRILGLRPD-----QFVADVLDDSKV----- 137
Query: 88 SLPPT----------HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
+ PT W + V L L + P M + ++ Q++L +
Sbjct: 138 QMTPTDFCFVVKWVGQENWQRALEVFEWLNLRHWYSPNARMLATILAVLGKANQEALAVE 197
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+D+ T Y ++ Y +G K + + MR+ G P V +N+ I+
Sbjct: 198 IFIRAESTVDN----TVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLIN 253
Query: 198 GLLKGG--NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
LK G P A+E+ ++R +P TY +I+ + S A+K+F++M +H C
Sbjct: 254 ARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYC 313
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+P++ TY A+++ + R G +AE++F++L+ G PD YN+L+ A+
Sbjct: 314 QPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKE 373
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLH 334
+ + M MG D +YN ++ YG+ G H
Sbjct: 374 ICNEMVQMGFIRDEMTYNTIIHMYGKQGQH 403
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+L+ R C P ++ L+ A +G + A+ E+R+ GL P + YN+ I
Sbjct: 233 LDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISAC 292
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N ++AV++F M+ CQP TY MI++YG+ S A +LF E+ S P+
Sbjct: 293 SRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDA 352
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISR 309
TY +L+ AFAREG ++ +EI ++ G D YN ++ Y +L
Sbjct: 353 VTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRD 412
Query: 310 MHM-GCEPDRASYNIMVDAYGRA 331
M + G PD +Y +++D+ G+A
Sbjct: 413 MKLSGRTPDAITYTVLIDSLGKA 435
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ KAE + EL P TY LL A+ G ++K + + EM + G
Sbjct: 323 MISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMG 382
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ YN+ I K G A+++++ MK P TYT++I+ GKA+K A
Sbjct: 383 FIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAA 442
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
+ +EM + KP + TY+AL+ +AR G EAEE F+ ++ +GI PD AY+ +++
Sbjct: 443 NVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVF 502
Query: 304 ------------YRLISRMHMGCEPDRASYNIMVDAYGR 330
YR + R G PD Y M+ GR
Sbjct: 503 LRFDEATKAMMLYREMVR--DGITPDPTVYGAMLRNLGR 539
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++S ++A + ++ C P TY ++ Y G KAE +F+E+ G
Sbjct: 288 LISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKG 347
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + + GN K EI M + TY +I++YGK + +AL
Sbjct: 348 YFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLAL 407
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ +M+ P+ TYT L+++ + EA + ++ G++P + Y+AL+ Y
Sbjct: 408 QLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGY 467
Query: 305 -RLISRMHM----------GCEPDRASYNIMVDAYGR 330
R R+ G PD+ +Y++M+D + R
Sbjct: 468 ARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLR 504
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 25/218 (11%)
Query: 118 MSCVSILLI-EAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+S SILLI +A+ + S +A+ Y + + PT Y +++ C + EA+
Sbjct: 838 ISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAM 897
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
EM + G P ++NS + + +K V+I+QR+K D QP +TY +I +Y +
Sbjct: 898 VTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCR 957
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ L +EMR +P + TY +L+ AF ++ L +AEE+FE+L
Sbjct: 958 DHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEEL----------- 1006
Query: 297 YNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
+ G + DR+ Y+IM+ Y +G H
Sbjct: 1007 -------------LSKGSKLDRSFYHIMMKIYRNSGNH 1031
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFRE 179
+ + +IE YG+ L +KAE + + L RC + + L++AY SG E+A AVF
Sbjct: 737 IDVAVIETYGKLKLWQKAE-SLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNT 795
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + G P+ N + L+ G ++ + Q ++ Q S + L+++ + + S
Sbjct: 796 MMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSN 855
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K++ M++ P + Y ++ + + E + +++ AG PD+ +N+
Sbjct: 856 IAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNS 915
Query: 300 LMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKCS 339
++ Y I G +PD +YN ++ Y R E CS
Sbjct: 916 MLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCS 966
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P EDTY L+ YC E+ ++ EMR+ GL P Y S I K A E+
Sbjct: 943 PDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEEL 1002
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ + + Y +M+ +Y + A KL + M+ +P I T L+ ++
Sbjct: 1003 FEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGS 1062
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G +EAE++ L+ G+ Y+++++AY +L+ G EPD
Sbjct: 1063 SGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRI 1122
Query: 321 YNIMVDA 327
+ + A
Sbjct: 1123 WTCFIRA 1129
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY +++A + ++ PT D+ LL+A + G LE+ V +E++ G
Sbjct: 776 LIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMG 835
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
S +D + N +A +I+Q MK P+ Y +MI L K +
Sbjct: 836 FQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVE 895
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM +P++ + +++ + + +I+++++ G++PD YN L+ Y
Sbjct: 896 AMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMY 955
Query: 305 -------RLISRMH----MGCEPDRASYNIMVDAYGRAGL 333
S MH +G EP +Y ++ A+G+ L
Sbjct: 956 CRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQL 995
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG++ H A Y ++ S P TY +L+ + + + +A V EM G
Sbjct: 393 IIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIG 452
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y++ I G + G +A E F M+R +P Y++M++++ + ++ A+
Sbjct: 453 VKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAM 512
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-GIEPDVYA 296
L+ EM P+ Y A++ RE E+ + I ++ G+ P A
Sbjct: 513 MLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIA 565
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G++ L AE + ELL Y +++K Y SG KAE + M+ G
Sbjct: 986 LIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAG 1045
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + G PQ+A ++ +K ST Y+ +I+ Y K + +
Sbjct: 1046 VEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGI 1105
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ EM+ +P+ +T + A + +A + + LQ +G +
Sbjct: 1106 QKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQDSGFD 1152
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ + +A E+L+ PT TY+ L+ Y +G +AE F MR+
Sbjct: 427 VLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRS 486
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+ P + Y+ +D L+ KA+ +++ M RD P Y M+ G+ +K
Sbjct: 487 GIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENK 542
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ Y H KAE + D+ PT T LL+ +Y SG ++AE V +++
Sbjct: 1020 IMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEM 1079
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL S + Y+S ID LK + ++ MK++ +P +T I + + A
Sbjct: 1080 GLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDA 1139
Query: 244 LKLFNEMR 251
+ L ++
Sbjct: 1140 ILLLQALQ 1147
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA------VEI----FQRMKRDCCQ 221
+A +F +MR G+ PS +Y S + K G P+ A EI F ++ D
Sbjct: 682 EASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVA- 740
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
+I YGK A L +R + + AL+ A+A G E+A +
Sbjct: 741 --------VIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAV 792
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGR 330
F + G P V + N L++A + R+ MG + ++S +++DA+ R
Sbjct: 793 FNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFAR 852
Query: 331 -AGLHEGKCSY 340
+ + E K Y
Sbjct: 853 VSNIAEAKKIY 863
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 1/160 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN-SYIDGLLKGGNPQKAVE 210
P++ Y ++ YC G E A + G+P + + + I+ K QKA
Sbjct: 697 PSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAES 756
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ +++ C + + +I Y + A +FN M P + + L+ A
Sbjct: 757 LVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALI 816
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+G EE + +++Q G + + +++A+ +S +
Sbjct: 817 VDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNI 856
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 103/179 (57%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + +A + E+ +P TY++L+K C +E+A+ + +EM+K G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+AV YN+ IDG K GN +KA+E+ +M +P+ T++ +I+ Y KA K A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ EM P++ YTAL++ ++G +EA + +++Q AG+ P+V+ + L++
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 147/330 (44%), Gaps = 27/330 (8%)
Query: 27 LRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF 86
++ + + SR C S F +F VL I+ F + + +W +
Sbjct: 97 IQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVL------IIAFSEMGLVEEALWVYY 150
Query: 87 --DSLPPTHATWDDLINVSVQLRLNKKW----DPIVLMSCVSIL----LIEAYGQKSLHK 136
D LP A L + + R + W D + + +++ LI+ ++
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+++ + PT Y +L++ C + +AE++FR MR G+ P+ YN+ +
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K + +KA+E++Q M D P+ T+ ++I+ K + A K +M S
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH----- 311
PNI Y L++ + + G EA + +++ I PDV+ Y+ L++ + RM
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 312 ------MGCEPDRASYNIMVDAYGRAGLHE 335
G P+ +YN ++D Y + G E
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y ++ +KA ++ + P T++ L+ YC +G +E A ++ EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y + IDG K GN ++A + + M+ P+ T + +I+ K + A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 245 KLF-------------NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
KLF NE+ C PN YTAL+ +G +A + F ++ +G+
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588
Query: 292 PDVYAYNALMEAYRLISRMH-------------MGCEPDRASYNIMVDAYGRAG 332
PDV+ +++ + MH MG P+ + Y ++ Y +G
Sbjct: 589 PDVFTCIVIIQGH--FRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y + + KKA Y E+L +P T+ +L+ C + + A +M +G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEI--------------------------------- 211
+ P+ VYN IDG K GN +A+ +
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388
Query: 212 --FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
Q MK+ P+ TY +I+ Y K A+++ ++M +PNI T++ L++ +
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
+ G E A ++ ++ G+ PDV AY AL+ EA+RL M G P+
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508
Query: 319 ASYNIMVDAYGRAG 332
+ + ++D + G
Sbjct: 509 FTLSCLIDGLCKDG 522
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P+VL L++A G+ + KA + + +C PT TY ++ G EK
Sbjct: 162 PVVLSE-----LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKV 216
Query: 174 EAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
V+ EM G P + Y++ I K G A+ +F MK +C QP+ + YT ++
Sbjct: 217 HEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+Y K K AL LF EM+ C P + TYT L+ + G EEA ++++ + G+ P
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTP 336
Query: 293 DVYAYNALMEAYRLISRM--------HMG---CEPDRASYNIMVDA 327
DV N LM + R+ MG C P SYN ++ A
Sbjct: 337 DVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKA 382
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+E TY++L+ YC + +EKA + EM + G PP Y S I+ L K + A E+
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ +K + S+ Y +MI +GK K A+ LFNEM++ P++ Y AL++ +
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLI----SRMHMGCEPDRAS 320
G+ EA + +++ G D+ ++N ++ + R I + H G +PD +
Sbjct: 527 AGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVT 586
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ + AG+ E
Sbjct: 587 YNTLLGCFAHAGMFE 601
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 149 RCIPTEDTYALLLKAYCMS-GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
RC PT +Y ++KA S + + + F +M+ G+ PS Y+ IDG K +K
Sbjct: 368 RCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEK 427
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ + + M P Y +IN GKA + A +LF E++ + + Y ++
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEP 316
F + G EA ++F +++ G PDVYAYNALM EA L+ +M GC
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTA 547
Query: 317 DRASYNIMVDAYGRAGL 333
D S+NI+++ + R G+
Sbjct: 548 DINSHNIILNGFARTGV 564
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 87 DSLPPTHATWDDLIN-------VSVQLRLNKKWDPIVLMSCVSIL--LIEAYGQKSLHKK 137
D + P+ T+ LI+ V L L ++ D C + LI A G+ ++
Sbjct: 403 DGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + EL ++ + YA+++K + G L +A +F EM+ G P YN+ +
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G++K G +A + ++M+ + C ++ +++N + + A+++F M+ KP
Sbjct: 523 GMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKP 582
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TY L+ FA G+ EEA + +++ G E D Y+++++A
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDA 628
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRD 218
L+KA + ++ KA +VF + + P++ YNS I L++ G +K E++ M
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
C P T TY+ +I+ Y K ++ A++LF+EM+ + +P YT L+ + + G E+A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
++FE+++ AG C P +Y ++ G+AG
Sbjct: 288 LDLFEEMKRAG------------------------CSPTVYTYTELIKGLGKAG 317
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ C PT TY ++ AY + L +A VF EM+K G P V Y + ID KGG
Sbjct: 391 EMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGG 450
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A++++ RM+ P T TY+ M+N GK A KLF EM + C PN+ TY
Sbjct: 451 YLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYN 510
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
++ A+ E ++++ +Q AG PD Y+ +M EA + M
Sbjct: 511 IMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHD 570
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 571 WAPDEPVYGLLVDLWGKAG 589
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ FQ +KR QP +YT MI + G+A + KL +EM S CKP + TY
Sbjct: 349 ALGFFQWLKR---QPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYN 405
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
+++A+ R EA ++FE++Q AG EPD Y L++ A L +RM +
Sbjct: 406 RIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEV 465
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y+ MV+ G+ G
Sbjct: 466 GLSPDTFTYSAMVNCLGKGG 485
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 45/259 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AYG+ + ++A + E+ + P TY L+ + G LE A ++ M++ G
Sbjct: 407 IIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVG 466
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y++ ++ L KGG+ A ++F M + C P+ TY +MI L KA +
Sbjct: 467 LSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVV 526
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA---------------- 288
KL+ +M+ +P+ TY+ ++ G +EAE +F +++
Sbjct: 527 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWG 586
Query: 289 ------------------GIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRA 319
G++P+V N+L+ A+ I+R G P
Sbjct: 587 KAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQ 646
Query: 320 SYNIMVDAYGRAGLHEGKC 338
+Y +++ A G C
Sbjct: 647 TYTLLLSCCTEAQAQMGLC 665
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G +AE ++E+ P E Y LL+ + +G ++KA + M +
Sbjct: 546 IVMEVLGHCGHLDEAEAVFIEMRHDWA-PDEPVYGLLVDLWGKAGNVDKALGWYHAMLQD 604
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ NS + LK Q A + Q M PS +TYTL+++
Sbjct: 605 GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLS 653
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 21/270 (7%)
Query: 87 DSLPPTHATWDDLINV---SVQLR-LNKKWDPIVLMSCV------SILLIEAYGQKSLHK 136
D P ++LIN+ S LR K +D + L++C + ++ + K+
Sbjct: 323 DGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLS 382
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + + +P+ TY++L+ YC + +EKA + EM + G PP Y S I
Sbjct: 383 EASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 442
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ L A E+FQ +K +C S Y +MI +GK + A+ LFNEM+ C
Sbjct: 443 NTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCT 502
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRL 306
P++ Y AL+ R +EA +F ++ G PD+ ++N ++ A +
Sbjct: 503 PDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEM 562
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
++M + +PD S+N ++ RAGL E
Sbjct: 563 FTKMKNSTIKPDVVSFNTILGCLSRAGLFE 592
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 95/179 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G + A + EL ++ + YA+++K + G L +A +F EM+K G
Sbjct: 441 LINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLG 500
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + G+++ +A +F+ M+ + C P ++ +++N + AL
Sbjct: 501 CTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGAL 560
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F +M++ KP++ ++ ++ +R GL EEA ++ +++ G + D+ Y++++EA
Sbjct: 561 EMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEA 619
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 147/356 (41%), Gaps = 51/356 (14%)
Query: 20 FIDKNGKLRSFNHKK---LSRKRC---GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFV 73
F GK R+F H ++ RC + G+ WK V G + +I+R +
Sbjct: 104 FFKWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRIL 163
Query: 74 QREVDSNTIWDAFDSLP-----PTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEA 128
+ N F + PT +T++ +I ++LM
Sbjct: 164 GKAKMVNRALSVFYQVKGRKCRPTASTYNSII--------------LMLM---------- 199
Query: 129 YGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
Q+ H+K Y E+ + C P TY+ L+ A+ + A +F EM++ GL P
Sbjct: 200 --QEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQP 257
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+A +Y + + K G ++A+ + + M+ C + TYT +I GK+ + A +
Sbjct: 258 TAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTY 317
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
M CKP++ L+N R +A ++F++++ P+V YN ++
Sbjct: 318 KNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEA 377
Query: 302 -----EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
EA RM G P +Y+I++D Y + E K L E+ K +P
Sbjct: 378 KAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVE-KALLLLEEMDEKGFP 432
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM------SC------VSILLIEAYGQKSLHK 136
PP A + LIN L + K++D + +C V ++I+ +G+
Sbjct: 431 FPPCPAAYCSLINT---LGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLN 487
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E+ C P Y L+ + +++A ++FR M + G P +N +
Sbjct: 488 EAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIIL 547
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL + G P+ A+E+F +MK +P ++ ++ +A A KL EM S +
Sbjct: 548 NGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQ 607
Query: 257 PNICTYTALVNAFAREGLCEEAE 279
++ TY++++ A + C+ E
Sbjct: 608 YDLITYSSILEAVGKVDDCKMVE 630
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 20/297 (6%)
Query: 66 AQQILRFVQRE-VDSNTI--WDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVS 122
AQ++LR +++ VD N + DSL + W+ + Q +L + + L+ C +
Sbjct: 292 AQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAF---ACQSQLVVRGMTLDLVMCTT 348
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L++ + S K+AE + L IP TY L+ YC G +E+ E++ +EM +
Sbjct: 349 --LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEE 406
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P+ + Y+S I+G K G +A+ + ++M P+ Y ++I+ Y KA K +
Sbjct: 407 KHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEI 466
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L+NEM+ K N + LVN R +EAEE+ + + G+ D Y +LM+
Sbjct: 467 ATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMD 526
Query: 303 AY----------RLISRMHMGCEP-DRASYNIMVDAYGRAGLHEGKCSYS-LVELSV 347
+ ++ M P D +YN++++ G +E K YS ++E+ +
Sbjct: 527 GFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGL 583
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y ++ ++A Y E++ + +P TY+ ++ C G L +A+ + REM+K G
Sbjct: 244 IISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMG 303
Query: 185 LPPSAVVYNSYIDGLLKGGN-----------------------------------PQKAV 209
+ P+ V Y + ID L K G+ P++A
Sbjct: 304 VDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAE 363
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F+ + + P++ TYT +I+ Y K L EM PN+ TY++++N +
Sbjct: 364 DMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGY 423
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++G+ +EA + +++ I P+ Y Y L++ Y
Sbjct: 424 TKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGY 458
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + + KKA ++ + TY L++ YC S ++KA A + +M G
Sbjct: 698 LIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEG 757
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YN + GLL G + E+F +MK + P TY +I+ YGK ++
Sbjct: 758 VSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESI 817
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L+ EM + P TY L++ FA+ G ++A E+ ++Q G+ P Y+ L+
Sbjct: 818 RLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 46/226 (20%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ YC LE+A A++ EM G P V Y+S ++GL K G +A E+ + M
Sbjct: 240 TYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREM 299
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMAL------------------------------- 244
K+ P+ YT +I+ KA ++ A
Sbjct: 300 KKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKP 359
Query: 245 ----KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+F + PN TYTAL++ + + G E E + ++++ I P+V Y+++
Sbjct: 360 KEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSI 419
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ EA ++ +M P+ Y I++D Y +AG E
Sbjct: 420 INGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQE 465
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ Y +++ P + TY +++KAYC G L+ A ++ EM+ + + PS++ N+ +
Sbjct: 570 EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLV 629
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL + G +KA+ + M P+ + +++N K+ K+ L++ ++ K
Sbjct: 630 VGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLK 689
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
N Y L+ F R + ++A + + + G D YNAL+ Y
Sbjct: 690 INQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALAT 749
Query: 306 LISRMHMGCEPDRASYN 322
++ G P+ +YN
Sbjct: 750 YTQMLNEGVSPNIVTYN 766
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 119/268 (44%), Gaps = 43/268 (16%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
D L NV V++ ++ ++ C L+ +A+G S+ K + C T T
Sbjct: 66 DLLRNVDVEVD-TVTYNTVIWGFCQHGLVNQAFGFLSIMVKKD---------TCFDT-IT 114
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+L+K +C GL + E + + G + +N+ IDG K G A+++ +RM+
Sbjct: 115 CNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMR 174
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---------------------C 255
++ +Y +IN + K + A L +E+ +
Sbjct: 175 KEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNL 234
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
+ ++ TYT +++ + ++ EEA ++E++ G PDV Y++++ EA
Sbjct: 235 EADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQE 294
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ M MG +P+ +Y ++D+ +AG
Sbjct: 295 LLREMKKMGVDPNHVAYTTLIDSLFKAG 322
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 47/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y +K + +A ++LD IP YA+L+ YC +G E A ++ EM+ G
Sbjct: 419 IINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG 478
Query: 185 LPPSAVV-----------------------------------YNSYIDGLLKGGNPQKAV 209
L + V+ Y S +DG K G A+
Sbjct: 479 LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAAL 538
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M TY ++IN + K + A +++ M PN TY ++ A+
Sbjct: 539 NMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAY 597
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
++G + A E++ +++ I P N L+ +A +++ M MG P+
Sbjct: 598 CKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNL 657
Query: 319 ASYNIMVDAYGRAG 332
+ ++++A ++G
Sbjct: 658 VIHRVLLNASSKSG 671
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+AY ++ A + E+ + +P+ T L+ +G +EKA V EM
Sbjct: 592 IMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVM 651
Query: 184 GLPPSAVVYNSYIDGLLKGGNP-----------------------------------QKA 208
G+ P+ V++ ++ K G +KA
Sbjct: 652 GIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKA 711
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ + M RD T TY +I Y ++S AL + +M + PNI TY L+
Sbjct: 712 TSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGG 771
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR----MHMGCE-------PD 317
GL E +E+F++++ G+ PD Y+ L+ Y I + + CE P
Sbjct: 772 LLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPK 831
Query: 318 RASYNIMVDAYGRAG 332
++YN+++ + + G
Sbjct: 832 TSTYNVLISDFAKVG 846
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+L+D ++ Y L+ +C + +KA +V + M + G V YN+ I G +
Sbjct: 682 QLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESS 741
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ +KA+ + +M + P+ TY L++ A +LF++M+ + P+ TY
Sbjct: 742 HVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYD 801
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
L++ + + G +E+ ++ ++ G P YN L+ +A L++ M +
Sbjct: 802 TLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVR 861
Query: 313 GCEPDRASYNIMV 325
G P ++Y+I++
Sbjct: 862 GVPPSSSTYDILI 874
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 14/193 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PT + L+ + GL+ + ++ EM +PP+ +N + K GN A++
Sbjct: 7 VPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALD 66
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + + + + T +G +++F L + ++ C I T LV F
Sbjct: 67 LLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIM--VKKDTCFDTI-TCNILVKGFC 123
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRA 319
R GL + E I + L G DV +N L++ Y L+ RM G D
Sbjct: 124 RIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIV 183
Query: 320 SYNIMVDAYGRAG 332
SYN +++ + + G
Sbjct: 184 SYNTLINGFCKRG 196
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 12/144 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YG+ K++ Y E++ +P TY +L+ + G +++A + EM+ G
Sbjct: 803 LISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRG 862
Query: 185 LPPSAVVYNSYI------------DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
+PPS+ Y+ I D LK A + M P T + +
Sbjct: 863 VPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISS 922
Query: 233 LYGKASKSFMALKLFNEMRSHKCK 256
+ + K A KL E+ SH K
Sbjct: 923 TFARPGKMLDAEKLLKEIFSHANK 946
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 44/236 (18%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+L S P T+ +L+ A+C G L A +R + V YN+ I G +
Sbjct: 33 YTEMLCSAVPPNVYTHNVLVHAWCKMGNLILA---LDLLRNVDVEVDTVTYNTVIWGFCQ 89
Query: 202 GGNPQKAVEIFQRM-KRDCCQPSTET---------------------------------- 226
G +A M K+D C +
Sbjct: 90 HGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIG 149
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL- 285
+ +I+ Y KA + +AL L MR +I +Y L+N F + G ++A+ + ++
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209
Query: 286 QGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRA-GLHEGKCSY 340
+ G++ V+ +N R+ ++ E D +Y ++ Y + GL E + Y
Sbjct: 210 ESRGVKDSVF-FNI---DDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALY 261
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A ++ L ++A + + + + P +Y L+ A+C + L +A V+ EM + G
Sbjct: 303 LLVALAKEGLGREARQVF-DKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 361
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VV+N+ I+GLL+G +AV++F+ MK P+ TYT++I + K K MA+
Sbjct: 362 MDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAM 421
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F EM+ KC+P++ TYT L+ + + + E++ G PD YNAL+
Sbjct: 422 ECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLL 481
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+A R+ +M G EP +YN+M+ +Y
Sbjct: 482 TNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSY 516
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A + E+ +++C P TY LL Y + +++ AV EM +
Sbjct: 406 MLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQK 465
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-M 242
G PP A YN+ I L P A I+++M + +P+ TY +M+ Y ++ M
Sbjct: 466 GCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAM 525
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ EM P++ +YT +N R G EEA + E++ G++ YN
Sbjct: 526 GCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYN 581
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF MRK G +N + L K G ++A ++F +
Sbjct: 263 DAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDK 322
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P +YT ++ + A A +++NEM P++ + ++ R
Sbjct: 323 MHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQR 381
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ + +M M C+PD A+Y
Sbjct: 382 RPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTC 441
Query: 324 MVDAYGRA 331
++ YG A
Sbjct: 442 LLVGYGNA 449
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + + Y + L K + V + Q M + S + + + I + A + A
Sbjct: 223 GFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKNA 281
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ +F MR + + ++ L+ A A+EGL EA ++F+++ G PD+ +Y ALM
Sbjct: 282 VGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLA 340
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
EA R+ + M G +PD +N M++ R
Sbjct: 341 WCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLR 378
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 1/166 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG + E+ C P TY L+K + + A ++++M K G
Sbjct: 442 LLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKG 501
Query: 185 LPPSAVVYNSYIDGLLKG-GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN + G N +++ M + P +YT+ IN + + + A
Sbjct: 502 LEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEA 561
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
K EM + K Y F++ G + E+ ++++ AG
Sbjct: 562 YKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFELAQKVKFAG 607
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 34/290 (11%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ------------LRLNKKWD 113
+ L ++Q+E I D F+ P T++ ++ Q L L + D
Sbjct: 283 VEDALGYIQQE-----IADGFE---PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD 334
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P V I + G+ +A+ +++D C+P T+ L+ A LE+A
Sbjct: 335 PDVFTYNTVINCLSKNGELD---EAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ RE+ GL P +N I+ L K G+P + +F+ MK C P TY ++I+
Sbjct: 392 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K AL L NEM S+ C + TY +++A ++ EEAEE+F+Q+ GI
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+N L+ +A LI +M G +P+ +YN ++ Y + G
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQG 561
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++++ C PT T +L+ YC G +E A ++ G P V YN+++ GL + G
Sbjct: 257 KMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNG 316
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+++ M ++ P TY +IN K + A + N+M C P+ T+
Sbjct: 317 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 376
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ A + + EEA ++ +L G+ PDVY +N L+ A + H+
Sbjct: 377 TLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 436
Query: 313 GCEPDRASYNIMVD 326
GC PD +YNI++D
Sbjct: 437 GCTPDEVTYNILID 450
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ S C P E TY +L+ C G L A + EM G P S V YN+ ID L K
Sbjct: 430 FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCK 489
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M S T+ +I+ KA + A +L +M +PN T
Sbjct: 490 KMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNIT 549
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y +++ + ++G ++A +I E + G E DV Y L+ A +L+ M
Sbjct: 550 YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 609
Query: 312 M-GCEPDRASYNIMVDAYGR 330
+ G P +YN ++ + R
Sbjct: 610 IKGIRPTPKAYNPVIQSLFR 629
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 111/247 (44%), Gaps = 20/247 (8%)
Query: 96 WDDLINVSVQLRLNKKW----DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
+DD +++ + N + D +V +++L+ + S K E Y E+
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLV-----EGSKLKLLESVYNEMTGRGIQ 194
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+KA C + + A + EM +G+ P + + + G ++ G+ + A+ +
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M C P+ T ++IN Y K + AL + + +P+ TY V+ +
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G A ++ + + G +PDV+ YN ++ EA ++++M GC PD +
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374
Query: 321 YNIMVDA 327
+N ++ A
Sbjct: 375 FNTLIVA 381
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+ A C G +F EM+ G P V YN ID L G A+++
Sbjct: 405 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDL 464
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ + C ST TY +I+ K + A ++F++M + + T+ L++ +
Sbjct: 465 LNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCK 524
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
++A E+ EQ+ G++P+ YN+++ Y L + G E D +
Sbjct: 525 AKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVT 584
Query: 321 YNIMVDAYGRAG 332
Y +++ +AG
Sbjct: 585 YGTLINGLCKAG 596
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A +K ++AE + + +D++ I + T+ L+ C + ++ A + +M K
Sbjct: 483 IIDALCKKMRIEEAEEVF-DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKE 541
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ + YNS + K GN +KA +I + M + + TY +IN KA ++ +A
Sbjct: 542 GLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 601
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LKL MR +P Y ++ + R +A +F ++ G PD Y +
Sbjct: 602 LKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIV--- 658
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+R + R G P + +++ +V+ + + E
Sbjct: 659 FRSLCR---GGGPIKEAFDFLVEMVNKGFMPE 687
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE- 210
P+ Y +++ +G + E + REMR+ G AVV S+++ + AV+
Sbjct: 87 PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146
Query: 211 IFQRMKRDC--CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ ++ D Q T + ++N+ + SK + ++NEM +P++ T L+ A
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISR-MHMGCEPD 317
R A + E++ G+ PD + LM+ + R+ ++ M GC P
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266
Query: 318 RASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ N++++ Y + G E Y E++ P
Sbjct: 267 GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEP 300
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 103/179 (57%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + +A + E+ +P TY++L+K C +E+A+ + +EM+K G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+AV YN+ IDG K GN +KA+E+ +M +P+ T++ +I+ Y KA K A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ EM P++ YTAL++ ++G +EA + +++Q AG+ P+V+ + L++
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 27/327 (8%)
Query: 27 LRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF 86
++ + + SR C S F +F VL I+ F + + +W +
Sbjct: 97 IQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVL------IIAFSEMGLVEEALWVYY 150
Query: 87 --DSLPPTHATWDDLINVSVQLRLNKKW----DPIVLMSCVSIL----LIEAYGQKSLHK 136
D LP A L + + R + W D + + +++ LI+ ++
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+++ + PT Y +L++ C + +AE++FR MR G+ P+ YN+ +
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K + +KA+E++Q M D P+ T+ ++I+ K + A K +M S
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH----- 311
PNI Y L++ + + G EA + +++ I PDV+ Y+ L++ + RM
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 312 ------MGCEPDRASYNIMVDAYGRAG 332
G P+ +YN ++D Y + G
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEG 417
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y + + KKA Y E+L +P T+ +L+ C + + A +M +G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEI--------------------------------- 211
+ P+ VYN IDG K GN +A+ +
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388
Query: 212 --FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
Q MK+ P+ TY +I+ Y K A+++ ++M +PNI T++ L++ +
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
+ G E A ++ ++ G+ PDV AY AL+ EA+RL M G P+
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508
Query: 319 ASYNIMVDAYGRAG 332
+ + ++D + G
Sbjct: 509 FTLSCLIDGLCKDG 522
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L+ YC G +EKA V +M + G+ P+ + +++ IDG K G + A+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
++ M P YT +I+ + K + A +L EM+ PN+ T + L++
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Query: 271 REGLCEEAEEIF 282
++G +A ++F
Sbjct: 520 KDGRISDAIKLF 531
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y ++ +KA ++ + P T++ L+ YC +G +E A ++ EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y + IDG K GN ++A + + M+ P+ T + +I+ K + A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 245 KLF 247
KLF
Sbjct: 529 KLF 531
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 155 DTYALL--LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
D+++L+ LKA + L + + + + +G P + S I GN A +F
Sbjct: 630 DSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMF 689
Query: 213 QRMKRDCCQPSTE--TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ PS ++T +I+ Y + AL+LF +M+ +P+I T T ++A A
Sbjct: 690 DEI------PSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACA 743
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G + E I ++ G++ D+ N+L+ Y
Sbjct: 744 DLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMY 777
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ Y +G + A +F E+ L V ++Y+D P KA+++F++M+ D
Sbjct: 672 LISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDN----QRPNKALQLFRQMQMDD 727
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
QP T T+ ++ M + +R ++C +L+N +++ G A
Sbjct: 728 VQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR 787
Query: 280 E-------------IFEQLQGAG-IEPDVYAYNALMEAYRLISRM-HMGCEPDRASYNIM 324
+ AG +E + ++ E Y L R+ H GC M
Sbjct: 788 RFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC---------M 838
Query: 325 VDAYGRAGL 333
VD RAGL
Sbjct: 839 VDLLCRAGL 847
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A ++ L ++A + + + + P +Y L+ A+C + L +A V+ EM + G
Sbjct: 303 LLVALAKEGLGREARQVF-DKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 361
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VV+N+ I+GLL+G +AV++F+ MK P+ TYT++I + K K MA+
Sbjct: 362 MDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAM 421
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F EM+ KC+P++ TYT L+ + + + E++ G PD YNAL+
Sbjct: 422 ECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLL 481
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+A R+ +M G EP +YN+M+ +Y
Sbjct: 482 TNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSY 516
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A + E+ +++C P TY LL Y + +++ AV EM +
Sbjct: 406 MLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQK 465
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-M 242
G PP A YN+ I L P A I+++M + +P+ TY +M+ Y ++ M
Sbjct: 466 GCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAM 525
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ EM P++ +YT +N R G EEA + E++ G++ YN
Sbjct: 526 GCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYN 581
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF MRK G +N + L K G ++A ++F +
Sbjct: 263 DAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDK 322
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P +YT ++ + A A +++NEM P++ + ++ R
Sbjct: 323 MHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQR 381
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ + +M M C+PD A+Y
Sbjct: 382 RPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTC 441
Query: 324 MVDAYGRA 331
++ YG A
Sbjct: 442 LLVGYGNA 449
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + + Y + L K + V + Q M + S + + + I + A + A
Sbjct: 223 GFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKNA 281
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ +F MR + + ++ L+ A A+EGL EA ++F+++ G PD+ +Y ALM
Sbjct: 282 VGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLA 340
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA R+ + M G +PD +N M++ R
Sbjct: 341 WCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRG 379
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 1/166 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG + E+ C P TY L+K + + A ++++M K G
Sbjct: 442 LLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKG 501
Query: 185 LPPSAVVYNSYIDGLLKG-GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN + G N +++ M + P +YT+ IN + + + A
Sbjct: 502 LEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEA 561
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
K EM + K Y F++ G + E+ ++++ AG
Sbjct: 562 YKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFELAQKVKFAG 607
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+ L + + ++ D+ C P TY L+ +C + KA EM+ G
Sbjct: 296 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 355
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y+++ID K G Q+A++ F M+R P+ TYT +I+ KA AL
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 415
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL E+ K N+ TYTAL++ EG +EAEE+F + AG+ P+ Y AL+ +
Sbjct: 416 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 475
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++ C G LE A ++F +M++ G P V YNS IDG K G + + IF++M
Sbjct: 257 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K C P TY +IN + K + A + +EM+++ KPN+ TY+ ++AF +EG+
Sbjct: 317 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 376
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIM 324
+EA + F ++ + P+ + Y +L+ EA +L+ + G + + +Y +
Sbjct: 377 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 436
Query: 325 VDAYGRAG 332
+D G
Sbjct: 437 LDGLCEEG 444
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + L A G+LE+A F +MRK+ + P N+ + L K G +
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ F+ M + S TY +MI+ K MA LF +M+ P+I TY +L++
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
+ GL +E IFEQ++ A +PDV YNAL+ + RM G +P+
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360
Query: 319 ASYNIMVDAYGRAGL 333
+Y+ +DA+ + G+
Sbjct: 361 VTYSTFIDAFCKEGM 375
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 118/245 (48%), Gaps = 17/245 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I+A+ ++ + ++A ++++ P E TY L+ A C +G L +A + E+ + G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + +DGL + G ++A E+F+ M P+ ETYT +++ + KA + A
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 485
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM+ KP++ Y ++ E EEA+ + +++ +GI + Y LM+AY
Sbjct: 486 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 545
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAGL------HEGKCSYSLVELSV 347
L + +G +Y ++D ++GL H G+ S ++ +V
Sbjct: 546 FKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV 605
Query: 348 KHYPA 352
Y A
Sbjct: 606 AVYTA 610
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ AY SG +A + EM GL + V Y + IDGL K G Q+A+ F RM
Sbjct: 538 YTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS 597
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP+ YT +++ K + +A KLF+EM P+ YTAL++ + G +
Sbjct: 598 EIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 657
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA + +++ G+E D++AY AL+ +A L+ M G PD Y ++
Sbjct: 658 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717
Query: 326 DAYGRAG 332
Y G
Sbjct: 718 KKYYALG 724
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + +A E+LD I TE TY L+ C SGL+++A F M + G
Sbjct: 541 LMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ VY + +DGL K + A ++F M P YT +I+ K AL
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 660
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L + M + ++ YTAL+ + G ++A + +++ G G+ PD Y L++ Y
Sbjct: 661 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 720
Query: 305 RLISRMHMGCE 315
+ ++ E
Sbjct: 721 YALGKVDEALE 731
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ ++ K+AE + +L++ P ++TY L+ + + +E A+ + +EM++
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P ++Y + + GL ++A + +K + YT +++ Y K+ ++ AL
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
L EM TY AL++ + GL +EA F ++ G++P+V Y AL++
Sbjct: 556 TLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A +L M G PD+ +Y ++D + G
Sbjct: 616 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 654
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L A + + ++A +L++ R P + LL G + + F++M G
Sbjct: 191 LFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAG 250
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ S YN ID L K G+ + A +F +MK P TY +I+ +GK +
Sbjct: 251 IKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECI 310
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M+ C P++ TY AL+N F + +A E +++ G++P+V Y+ ++A+
Sbjct: 311 CIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAF 370
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + P+ +Y ++DA +AG
Sbjct: 371 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAG 409
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C P + + + + A + F +MR + P + AL++ ++ G +
Sbjct: 178 RNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGD 237
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMV 325
+ + F+ + AGI+ V+ YN +++ A L ++M G PD +YN ++
Sbjct: 238 LSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297
Query: 326 DAYGRAGL 333
D +G+ GL
Sbjct: 298 DGHGKLGL 305
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ H++A ++ ++ C P+ TY L+ AY GLLE+A + +EM G
Sbjct: 297 LLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG 356
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y + I GL + G A+ + M R+ C P+ TY +I ++G K +
Sbjct: 357 MKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMM 416
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+++RS P++ T+ L+ F + GL E +F++++ AG P+ Y +L+ +Y
Sbjct: 417 IVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 476
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ RM G PD ++YN ++ A R G
Sbjct: 477 SRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGG 515
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++ L+++A + E+ + P + T+ LL Y + E+A V ++M G
Sbjct: 262 LISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAG 321
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YNS I +K G ++A+E+ Q M+ +P TYT +I+ + K AL
Sbjct: 322 CTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAAL 381
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++EM + C PN+CTY AL+ G E +F+ L+ AG PDV +N L+
Sbjct: 382 ATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVF 441
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R +Y ++ +Y R GL +
Sbjct: 442 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 483
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 54/269 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ L + + E+ + IP DTY L+ +Y GL ++A +++ M + G
Sbjct: 437 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 496
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK--SFM 242
+ P YN+ + L +GG +A ++F M+ C+P +Y+ +++ Y A K
Sbjct: 497 IYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMK 556
Query: 243 AL---------------------------------KLFNEMRSHKCKPNICTYTALVNAF 269
AL K F E+R +C +I A+V+ +
Sbjct: 557 ALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIY 616
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
+ + ++ EE+ ++ I YN+LM Y L G PDR
Sbjct: 617 GKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDR 676
Query: 319 ASYNIMVDAYGRAG--------LHEGKCS 339
SYN ++ AYGR G E KCS
Sbjct: 677 YSYNTVIYAYGRKGQMKEASRLFSEMKCS 705
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKY 183
L+ + + + A + ++D P TY ++L Y MS ++ + M++
Sbjct: 191 LVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSMKED 250
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN+ I + G ++A ++F MK +P T+ ++++YGKA + A
Sbjct: 251 GIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEA 310
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + +M + C P++ TY +L++A+ ++GL EEA E+ ++++ G++PDV Y L+
Sbjct: 311 IGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISG 370
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
I ++ GC P+ +YN ++ +G G
Sbjct: 371 LDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRG 410
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ GL +A +F EM+ G P V +NS +D K ++A+ + ++M
Sbjct: 258 TYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKM 317
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C PS TY +I+ Y K AL+L EM KP++ TYT L++ R G
Sbjct: 318 ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKI 377
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
+ A + ++ G P++ YNAL++ + + + G PD ++N +
Sbjct: 378 DAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTL 437
Query: 325 VDAYGRAGL 333
+ +G+ GL
Sbjct: 438 LAVFGQNGL 446
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 86/164 (52%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY E++ + C P TY L+K + + G + VF ++R G P V +N+ +
Sbjct: 383 TYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFG 442
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + +F+ MK+ P +TY +I+ Y + A++++ M P+I
Sbjct: 443 QNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDIS 502
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY A+++A AR G +AE++F +++ +PD +Y++L+ AY
Sbjct: 503 TYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAY 546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + +L + +P T+ LL + +GL + VF+E
Sbjct: 397 CTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKE 456
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+K G P Y S I + G +A+EI++RM P TY +++ + +
Sbjct: 457 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 516
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF EM CKP+ +Y++L++A+A ++ + + E + IEP +
Sbjct: 517 WVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKT 576
Query: 300 LM-------------EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
L+ +A++ + R C D N MV YG+
Sbjct: 577 LVLVNNKVNSLSETEKAFQELRRRR--CSLDINVLNAMVSIYGK 618
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV-------------------- 176
+AE + E+ D C P E +Y+ LL AY + L+K +A+
Sbjct: 519 QAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLV 578
Query: 177 ---------------FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
F+E+R+ V N+ + K +K E+ MK +
Sbjct: 579 LVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSIN 638
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
S TY ++++Y + + E++S +P+ +Y ++ A+ R+G +EA +
Sbjct: 639 HSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRL 698
Query: 282 FEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGR 330
F +++ +G++PD+ YN +++Y L+ + GC+P+ +YN +++ Y R
Sbjct: 699 FSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCR 758
Query: 331 AG 332
G
Sbjct: 759 HG 760
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ E + EL RC + ++ Y + +++K E V M++ + SA YNS +
Sbjct: 589 ETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLM 648
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G+ +K I +K +P +Y +I YG+ + A +LF+EM+ K
Sbjct: 649 HMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVK 708
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
P+I TY + ++ + EEA ++ L G +P+ YN+++E Y RM
Sbjct: 709 PDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRM 762
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 17/226 (7%)
Query: 82 IWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
+ + +SL T + +L L +N VL + VSI YG+ + KK E
Sbjct: 580 VNNKVNSLSETEKAFQELRRRRCSLDIN------VLNAMVSI-----YGKNKMVKKVEEV 628
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ + TY L+ Y G EK EA+ E++ G+ P YN+ I +
Sbjct: 629 LTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGR 688
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++A +F MK +P TY + I Y A+ L + + CKPN T
Sbjct: 689 KGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERT 748
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI 307
Y +++ + R G EA+ L P +Y + E +RL+
Sbjct: 749 YNSILEGYCRHGRMVEAKSFLSNL------PKIYPGISKEEKHRLL 788
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------- 305
P+ YTALV+ F+R G +A +F ++ G++P + YN ++ Y
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 306 LISRMHM-GCEPDRASYNIMVDAYGRAGLH 334
L+ M G E DR +YN ++ R GL+
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLY 272
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 156 TYALLLKAYCMSG-LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY ++L Y G ++ +++F+EM+ + P YN+ I ++ + Q+A+ +FQ
Sbjct: 111 TYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQE 170
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK C P+ TY ++++YGK A +L EM + PNI TY L+ A+AR GL
Sbjct: 171 MKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGL 230
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
C+EA + + L G+ PD + Y L+ A+ R C P+ +YNI
Sbjct: 231 CDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNI 290
Query: 324 MVDAYGR 330
++D YGR
Sbjct: 291 LIDIYGR 297
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ +HK+A +E+ + P TY L+ AY +GL ++A A+ + + G
Sbjct: 186 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 245
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + I + +KA+E F M++ C P+ TY ++I++YG+ K +
Sbjct: 246 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 305
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F M+ C P++ T+ +L+ +F G+ E +F +++ AG P V +N L+E Y
Sbjct: 306 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 365
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A Q S ++A + E+ ++ C P TY LL Y G+ ++A + EM G
Sbjct: 151 MITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAG 210
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YN I + G +A + + + P TY +I+ + +A + AL
Sbjct: 211 ISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKAL 270
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
+ F EMR C PNI TY L++ + R ++ ++F+ +Q PD+ +N+L+++
Sbjct: 271 ETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSF 330
Query: 304 ------------YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+R + R G P ++NI+++ YGR G
Sbjct: 331 GNCGMLTEVSNVFREMKR--AGYMPGVDTFNILIECYGRCG 369
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 12/222 (5%)
Query: 124 LLIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++++ YG++ + + + E+ D P + TY ++ A + ++A +F+EM++
Sbjct: 114 VMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKE 173
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P+ V YN+ +D KGG ++A E+ M+ P+ TY +I Y +A
Sbjct: 174 AGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDE 233
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L + S P+ TY L++AF R E+A E F +++ P++ YN L++
Sbjct: 234 AAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILID 293
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
Y + ++ C PD ++N ++ ++G G+
Sbjct: 294 IYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGM 335
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
AYC + +A+ ++ G P V+N+ I K G ++AV++ + +++ +P
Sbjct: 470 AYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKP 529
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
TY ++++YG+ A ++ +EMR PN+ TY L+ ++ + G ++A +F
Sbjct: 530 DGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVF 589
Query: 283 EQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+ A + PD + +N L+ EA +I M GC+P + ++ ++D Y
Sbjct: 590 GDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + ++KA T+ E+ + C P TY +L+ Y L+ VF+ M++
Sbjct: 256 LISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKN 315
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V +NS + G + +F+ MKR P +T+ ++I YG+ ++
Sbjct: 316 CTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSV 375
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ + +P + T+ AL+ + AREG ++ E++ +++ AG++ + L+ +Y
Sbjct: 376 DIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSY 435
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIE YG+ + Y LL + PT T+A L+ + G ++ E V +EM +
Sbjct: 360 ILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 419
Query: 184 GLPPSAVVY--------NS--------YIDGLLKGG-NPQKAV--EIFQRMKRDCC---- 220
GL S + NS YID L K P + + F CC
Sbjct: 420 GLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNE 479
Query: 221 -------------QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
P + + MI++ K A+KL E+R + KP+ TY L++
Sbjct: 480 AQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMS 539
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EP 316
+ REG+ +AEE+ +++ AG P++ YN L+ +Y RM P
Sbjct: 540 MYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP 599
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
D ++N +V +Y GL+ K + S++E +H
Sbjct: 600 DNFTFNTLVGSYSSLGLY--KEALSVIEYMTEH 630
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK---AV 209
T+ +KA G +KA VF +RK+ V + I +L GN ++ A+
Sbjct: 1 TDSELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVL--GNHEQLPAAL 58
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+F+ +K+D YT +I++ +A + + LF M+ + N TY +++
Sbjct: 59 ELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDL 118
Query: 269 FAREGLC-EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
+ + G + + +F++++ I PD Y YN ++ EA RL M GC P
Sbjct: 119 YGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCP 178
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+R +YN ++D YG+ G+H+ + S LVE+
Sbjct: 179 NRVTYNALLDVYGKGGMHK-EASELLVEM 206
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P+ + C + +L AY + + +A+ +L D+ P + ++ G +E+A
Sbjct: 458 PLSGILCKTFVL--AYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERA 515
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ E+RK L P V YN + + G KA E+ M+R P+ TY ++
Sbjct: 516 VKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYS 575
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
Y K + A ++F +M + + +P+ T+ LV +++ GL +EA + E + G +P
Sbjct: 576 YTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPT 635
Query: 294 VYAYNALMEAY 304
+ AL++ Y
Sbjct: 636 QITFKALLDGY 646
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 47/258 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ YG+ + + + C P T+ LLK++ G+L + VFREM++
Sbjct: 290 ILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 349
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P +N I+ + G +V+I++ + R QP+ T+ ++ + +
Sbjct: 350 GYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQC 409
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREG-----------------------LCE---- 276
K+ EM + + + L++++A G LC+
Sbjct: 410 EKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVL 469
Query: 277 ---------EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEP 316
EA+ QL G PD+ +NA++ A +L+ + +P
Sbjct: 470 AYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKP 529
Query: 317 DRASYNIMVDAYGRAGLH 334
D +YN ++ YGR G++
Sbjct: 530 DGVTYNCLMSMYGREGMY 547
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + + K AEF E+ S P E TY+LL+ AY +G E A V +EM
Sbjct: 332 LLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANN 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ V++ + G QK+ ++ + MK +P Y +MI+ +GK S A+
Sbjct: 392 IMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAM 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F++M S +P+ T+ L++ + L E AEE+FE++ G P V +N ++ ++
Sbjct: 452 DTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSF 511
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
L+ M +G P+ +Y ++D YG++G
Sbjct: 512 GEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSG 550
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + LH++AE + E+++ P T+ +++ ++ + + + MR G
Sbjct: 472 LIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLG 531
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + ID K G A+E + MK +PS+ Y +IN Y + S A+
Sbjct: 532 LLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAV 591
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F MR+ KP++ +L+NAF + EA + + ++ ++PDV Y LM+A
Sbjct: 592 NAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKAL 651
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDA 327
+ + + GC PDR + ++ A
Sbjct: 652 IRVDKFNKVPSVYEEMILAGCTPDRKARAMLRSA 685
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T ++ A SG + +AEA+F EM+ GL P YN + G +K G + A I
Sbjct: 289 PRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFI 348
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+R P TY+L+I+ Y A + A + EM ++ PN ++ ++ ++
Sbjct: 349 VSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRD 408
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS-----------RMHMGCEPDRAS 320
G +++ ++ ++++ +G+ PD + YN +++ + S + G +PD +
Sbjct: 409 RGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVT 468
Query: 321 YNIMVDAYGRAGLHE 335
+N ++D + +A LHE
Sbjct: 469 WNTLIDCHCKAELHE 483
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 11/227 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LLI+AY + A E+ + +P ++ +L +Y G +K+ V +E
Sbjct: 362 CTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKE 421
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G+ P YN ID K A++ F +M + QP T T+ +I+ + KA
Sbjct: 422 MKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAEL 481
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +LF EM P + T+ ++N+F + ++ + + ++ G+ P+V Y
Sbjct: 482 HERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTT 541
Query: 300 LMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
L++ Y R G +P YN +++AY + GL E
Sbjct: 542 LIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSE 588
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
I +I A G +AE + E+ D+ P Y LLK Y +G+L+ AE + EM +
Sbjct: 295 IAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMER 354
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASK 239
G+ P Y+ ID G + A + + M+ + P++ ++ ++ Y G+ K
Sbjct: 355 SGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQK 414
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
SF LK EM++ +P+ Y +++ F + + A + F+++ GI+PD +N
Sbjct: 415 SFQVLK---EMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNT 471
Query: 300 LMEAY---RLISR--------MHMGCEPDRASYNIMVDAYG 329
L++ + L R M G P ++NIM++++G
Sbjct: 472 LIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFG 512
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 84 DAFDSL-----PPTHATWDDLINVSVQLRLNKKWDPIV-------LMSCVSI--LLIEAY 129
D FD + P TW+ LI+ + L+++ + + CV+ ++I ++
Sbjct: 452 DTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSF 511
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G++ + + +P TY L+ Y SG A +M+ GL PS+
Sbjct: 512 GEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSS 571
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+YN+ I+ + G ++AV F+ M+ D +PS +IN +G+ + A +
Sbjct: 572 TMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKY 631
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
M+ + KP++ TYT L+ A R + ++E++ AG PD A L A +
Sbjct: 632 MKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLRSALK 687
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ + +G KA ++ GL P + I L G +A IF+ MK +
Sbjct: 262 IIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNG 321
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P T Y ++ Y KA A + +EM P+ CTY+ L++A++ G E A
Sbjct: 322 LKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESAR 381
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAY 328
+ ++++ I P+ Y ++ ++ +YR L + G PDR YN+M+D +
Sbjct: 382 IVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTF 441
Query: 329 GR 330
G+
Sbjct: 442 GK 443
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 53/235 (22%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C E Y++L+ A G EK F ++ L P + YN+ I+ + + +KA+
Sbjct: 150 CFSYELLYSILIHAL---GRSEKLYEAFLLSQQQALSP--LTYNALINACARNNDLEKAI 204
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASK--SFMALKLFNEMRSHKCK----------- 256
+ RM++D Y+L+I ++++ S + KL++E++ K +
Sbjct: 205 NLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIV 264
Query: 257 ------------------------PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
P T A+++A G EAE IFE+++ G++P
Sbjct: 265 GFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKP 324
Query: 293 DVYAYNALMEAYR----------LISRMHM-GCEPDRASYNIMVDAYGRAGLHEG 336
AYN L++ Y ++S M G PD +Y++++DAY AG E
Sbjct: 325 KTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWES 379
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 107/202 (52%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+L+ P Y +L+ +C G + A+ +F E+RK GL P+ V +N+ I+GL K
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
N + + + M+ + P TY+++I+ K + +A +LF+EM+ +PN T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
+TAL++ R + A + Q+ G++PD+ YN L+ +A +L+ M
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
M G +PD+ +Y ++D Y + G
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEG 412
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++R P TY++L+ C G L+ AE +F EM++ GL P+ + + + IDG +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ + +M +P Y ++N K A KL +EM+ KP+ TYT L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ + +EG E A EI + + G+ D A+ AL+ +A R + M G +
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 316 PDRASYNIMVDAYGRAG 332
PD A+Y +++D Y + G
Sbjct: 466 PDDATYTMVIDGYCKKG 482
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 8/188 (4%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ YC G LE A + + M + G+ V + + I G + G + A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P TYT++I+ Y K M KL EM+ + KP + TY L+N +
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHMGCEPDRASYNI 323
+G + A + E + G+ PD YN L+E + L R G D A Y
Sbjct: 516 QGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTS 575
Query: 324 MVDAYGRA 331
+V Y ++
Sbjct: 576 LVSEYNKS 583
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + A TY ++L P Y LL C G + KA + EM+ G
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + Y + IDG K G+ + A+EI + M + +T +I+ + + + A
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM KP+ TYT +++ + ++G + ++ +++Q G +P V YN LM
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L + +++G PD +YNI+++ + + G E
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 135/316 (42%), Gaps = 37/316 (11%)
Query: 48 WKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDA---FD-----SLPPTHATWDDL 99
W + S ++ FP P Q + + +I DA F+ L PT +++ L
Sbjct: 208 WTFYSEILEYGFP---PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTL 264
Query: 100 IN-------VSVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
IN + RL K + P V V LI ++ AE + E+
Sbjct: 265 INGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSV---LIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
P T+ L+ S ++ A + +M G+ P V+YN+ ++GL K G+ K
Sbjct: 322 RGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ MK +P TYT +I+ Y K A+++ M + +TAL++
Sbjct: 382 ARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEP 316
F R+G +AE ++ AG++PD Y +++ Y +L+ M + G +P
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Query: 317 DRASYNIMVDAYGRAG 332
+YN++++ + G
Sbjct: 502 GVITYNVLMNGLCKQG 517
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 103 SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
++++R + +VL + LI + + + AE T E++++ P + TY +++
Sbjct: 417 AMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVID 476
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
YC G ++ + +EM+ G P + YN ++GL K G + A + + M P
Sbjct: 477 GYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536
Query: 223 STETYTLMINLYGKASKSFMALKLFNE 249
TY +++ + K K+ LKL NE
Sbjct: 537 DDITYNILLEGHCKNGKAEDLLKLRNE 563
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 26/234 (11%)
Query: 116 VLMSCVSIL--LIEAYGQKSLHKKAEFTYLELLDS---RCIPTEDTYALLLKAYCMSGLL 170
+ C SI+ L+ G+ S A + +LD+ RC + + L+ AY SG +
Sbjct: 116 MFQECQSIIRFLVSRKGKDS----AASVFAAILDTAGTRC--SNFVFDALMIAYWDSGFV 169
Query: 171 EKAEAVFREMRK--YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
A FR +R + +P Y +D ++ +P + + P + Y
Sbjct: 170 SDAIQCFRLVRNSNFQIPFHGCGY--LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYN 227
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++IN + K A +FNE+R +P ++ L+N + +E + + ++
Sbjct: 228 ILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN 287
Query: 289 GIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
I PDV+ Y+ L+ A +L M G P+ ++ ++D R+
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRS 341
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y LL +C +++A M G P V YN+ + L K G AV
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 277
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI ++ C P TY +I+ K K+ A+KL +EMR KP+I TY++LV+
Sbjct: 278 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 337
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+REG +EA + F L+G GI P+ YN++M A ++ M C+P
Sbjct: 338 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 397
Query: 319 ASYNIMVDAYGRAGL 333
A+Y I+++ GL
Sbjct: 398 ATYTILIEGIAYEGL 412
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ ++L++ C +G AE + +M + G PS V +N I+ L + G +A+
Sbjct: 148 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 207
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+I ++M C P++ +Y +++ + K K A++ + M S C P+I TY L+ A
Sbjct: 208 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 267
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDR 318
++G + A EI QL G P + YN +++ A +L+ M G +PD
Sbjct: 268 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 327
Query: 319 ASYNIMVDAYGRAG 332
+Y+ +V R G
Sbjct: 328 ITYSSLVSGLSREG 341
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 15/235 (6%)
Query: 116 VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLE 171
L C S+ Y Q + + ++LLD P TY +L+ C G L+
Sbjct: 75 TLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 134
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A M YG P+ + +N + + G A ++ M R C PS T+ ++I
Sbjct: 135 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 194
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
N + A+ + +M H C PN +Y L++ F +E + A E + + G
Sbjct: 195 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 254
Query: 292 PDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
PD+ YN L+ A +++++ GC P +YN ++D + G E
Sbjct: 255 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 309
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++L C P+ T+ +L+ C GLL +A + +M +G P+++ YN +
Sbjct: 171 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 230
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K +A+E M C P TY ++ K K +A+++ N++ S C P
Sbjct: 231 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 290
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
+ TY +++ ++ G E A ++ ++++ G++PD+ Y++L+ EA +
Sbjct: 291 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 350
Query: 308 SRMH-MGCEPDRASYN 322
+ +G P+ +YN
Sbjct: 351 HDLEGLGIRPNAITYN 366
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YL+++ SR C P TY LL A C G ++ A + ++ G P + YN+ IDGL
Sbjct: 244 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 303
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE----------- 249
K G ++A+++ M+R +P TY+ +++ + K A+K F++
Sbjct: 304 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 363
Query: 250 ------------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M S +CKP TYT L+ A EGL +EA ++ +L
Sbjct: 364 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423
Query: 286 QGAGI 290
G+
Sbjct: 424 CSRGL 428
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
++ ++ C + +A + EMR G P V YN I+G+ K G +A++ M
Sbjct: 85 FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
CQP+ T+ +++ + A KL ++M C P++ T+ L+N R+GL
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
A +I E++ MH GC P+ SYN ++ + + +
Sbjct: 205 RAIDILEKMP-----------------------MH-GCTPNSLSYNPLLHGFCKEKKMDR 240
Query: 337 KCSYSLVELSVKHYP 351
Y + +S YP
Sbjct: 241 AIEYLDIMVSRGCYP 255
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AEF E+ + P E TY+LL+ AY +G E A V +EM
Sbjct: 333 LLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASN 392
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ VY+ + G QK+ ++ + MK + QP Y +MI+ +GK + A+
Sbjct: 393 VEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAM 452
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
F M S +P+ T+ L+N + G AEE+F ++Q G P + YN ++
Sbjct: 453 ATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSM 512
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ +S+M G P+ +Y +VD YG++G
Sbjct: 513 GEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSG 551
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AY + A E+ S P Y+ +L +Y G +K+ V ++M+
Sbjct: 367 LLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSN 426
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A+ F+RM + +P T T+ +IN + K+ + MA
Sbjct: 427 GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMA 486
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF EM+ P I TY ++N+ + E+ ++Q G+ P+ Y L++
Sbjct: 487 EELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDV 546
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
Y R G +P YN +++AY + GL E
Sbjct: 547 YGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSE 589
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ +G+ + A T+ +L P T+ L+ +C SG AE +F EM++
Sbjct: 437 VMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQR 496
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN I+ + + ++ +M+ P++ TYT ++++YGK+ + A
Sbjct: 497 GYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDA 556
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
++ ++S KP Y AL+NA+A+ GL E A F + G+ P + A N+L+
Sbjct: 557 IECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINA 616
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA+ ++ M EPD +Y ++ A R
Sbjct: 617 FGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRV 655
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T ++ A SG +AEA+F E+R+ G P YN+ + G +K G+ + A +
Sbjct: 290 PKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFV 349
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M++ +P +TY+L+I+ Y A + A + EM + +PN Y+ ++ ++
Sbjct: 350 VSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRD 409
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPD 317
+G +++ ++ + ++ G++PD + YN +++ + R++S G PD
Sbjct: 410 KGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSE---GIRPD 466
Query: 318 RASYNIMVDAYGRAGLH 334
++N +++ + ++G H
Sbjct: 467 TVTWNTLINCHCKSGRH 483
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ +I A G +AE + E+ ++ P Y LLK Y +G L+ AE V EM K
Sbjct: 296 VAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEK 355
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASK 239
G+ P Y+ ID G + A + + M+ +P++ Y+ ++ Y G+ K
Sbjct: 356 AGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQK 415
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
SF LK +M+S+ +P+ Y +++ F + + A FE++ GI PD +N
Sbjct: 416 SFQVLK---DMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNT 472
Query: 300 LMEAYRLISRMHM-----------GCEPDRASYNIMVDAYG 329
L+ + R +M G P +YNIM+++ G
Sbjct: 473 LINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMG 513
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL R + T TY L+ A +G +EKA + +MR+ G P V Y+S I L +
Sbjct: 176 LLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNK 235
Query: 205 PQKAV--EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+ +++ ++ D + +I + KA A++ +S+ P T
Sbjct: 236 IDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTL 295
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH- 311
A++ A G EAE +FE+++ G EP AYNAL++ Y ++S M
Sbjct: 296 VAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEK 355
Query: 312 MGCEPDRASYNIMVDAYGRAGLHEG 336
G +PD +Y++++DAY AG E
Sbjct: 356 AGVKPDEQTYSLLIDAYAHAGRWES 380
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + I L G +A +F+ ++ + +P T Y ++ Y K A
Sbjct: 287 GLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDA 346
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EM KP+ TY+ L++A+A G E A + ++++ + +EP+ Y Y+ ++ +
Sbjct: 347 EFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILAS 406
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGR 330
YR L G +PDR YN+M+D +G+
Sbjct: 407 YRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGK 444
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 9/228 (3%)
Query: 91 PTHATWDDLINVSVQL-RLNKKWDPIVLMS------CVSI--LLIEAYGQKSLHKKAEFT 141
P TW+ LIN + R N + M C++ ++I + G++ ++
Sbjct: 465 PDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLF 524
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++ +P TY L+ Y SG A ++ G P++ +YN+ I+ +
Sbjct: 525 LSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQ 584
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + AV F+ M + PS +IN +G+ + A + M+ + +P++ T
Sbjct: 585 RGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVT 644
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
YT L+ A R ++ ++E++ +G PD A L A R + +
Sbjct: 645 YTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSALRYMKQ 692
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN--PQKAVE 210
T Y ++ Y G K + + MR+ G P V +N+ I+ LK G P A+E
Sbjct: 253 TVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIE 312
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++R +P T TY +I+ +AS A K+F++M +H C+P++ TY A+++ +
Sbjct: 313 LLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYG 372
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRA 319
R GL +AE++F L+ G PD +YN+L+ A+ + +G D
Sbjct: 373 RCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEM 432
Query: 320 SYNIMVDAYGRAGLHE 335
+YN M+ YG+ G +E
Sbjct: 433 TYNTMIHMYGKQGQNE 448
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+L+ R C P ++ L+ A +G + A+ E+R+ GL P + YN+ I
Sbjct: 277 LDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISAC 336
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N ++A ++F M+ CQP TY MI++YG+ S A +LFN++ S P+
Sbjct: 337 SRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDA 396
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISR 309
+Y +L+ AFAREG E+ +EI+E++ G D YN ++ Y +L
Sbjct: 397 VSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRD 456
Query: 310 MH-MGCEPDRASYNIMVDAYGRAG 332
M G PD +Y +++D+ G+
Sbjct: 457 MQSSGRNPDAVTYTVLIDSLGKTN 480
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A + S ++A + ++ C P TY ++ Y GL KAE +F ++ G
Sbjct: 332 LISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + + GN +K EI++ M + TY MI++YGK ++ +AL
Sbjct: 392 FFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELAL 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ +M+S P+ TYT L+++ + EA + ++ G++P + Y+AL+ Y
Sbjct: 452 QLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGY 511
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAG------------LHEG-KCSY 340
+ + G PD +Y++M+D + R LH+G +
Sbjct: 512 AKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDH 571
Query: 341 SLVELSVK 348
SL EL ++
Sbjct: 572 SLYELMLR 579
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y ++ + + EA+ EM + G P ++NS + + + +K +++
Sbjct: 916 PTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQV 975
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+QR+K D +P +TY +I +Y + + L +EMR +P + TY +LV +F +
Sbjct: 976 YQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGK 1035
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRAS 320
+ L E+AEE+FE+LQ G + D Y+ +M+ Y RL S M G EP A+
Sbjct: 1036 QQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIAT 1095
Query: 321 YNIMVDAYGRAG 332
++++ +YG +G
Sbjct: 1096 MHLLMVSYGSSG 1107
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 17/242 (7%)
Query: 116 VLMSCVSILL--IEAYGQKSLHKKAEFTYLELLDSRCIPTE-DTYALLLKAYCMSGLLEK 172
+L++ +S+ + IEAYG+ L +KAE + L RCI + + L++AY SG E+
Sbjct: 773 ILLNNISLYVNVIEAYGRLKLWQKAE-SVAGNLRQRCITVDRKVWNALIEAYAASGCYER 831
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A A+F M + G P+ N + L+ G + + Q ++ + S + LM++
Sbjct: 832 ARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLD 891
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ +A F K+++ M++ P + Y + +R + E + +++ AG +P
Sbjct: 892 AFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKP 951
Query: 293 DVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKCSYS 341
D+ +N++++ Y I G EPD +YN ++ Y R H + +S
Sbjct: 952 DLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRD--HRPEEGFS 1009
Query: 342 LV 343
L+
Sbjct: 1010 LM 1011
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P EDTY L+ YC E+ ++ EMR GL P Y S + K ++A E+
Sbjct: 986 PDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEEL 1045
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ ++ C+ Y M+ +Y + A +LF+ M+ +P I T L+ ++
Sbjct: 1046 FEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGS 1105
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G +EAE++ L+ G Y+++++AY +LI G EPD
Sbjct: 1106 SGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRI 1165
Query: 321 YNIMVDA 327
+ + A
Sbjct: 1166 WTCFIRA 1172
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+A + ++ + L K AVE+F R + + + Y M+ +Y + + +L
Sbjct: 218 PNARMLSTILSVLGKANQEALAVEVFMRAEPSAGN-TVQVYNAMMGVYARRGRFNKVQEL 276
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREG--LCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ MR CKP++ ++ L+NA + G + A E+ +++ +G+ PD YN L+
Sbjct: 277 LDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISAC 336
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
EA ++ M C+PD +YN M+ YGR GL
Sbjct: 337 SRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGL 376
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 46/256 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIEAY +++A + ++ PT DT LL+A + G L++ V +E++ G
Sbjct: 819 LIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMG 878
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
S +D + GN + +I+ MK P+ Y +M L + +
Sbjct: 879 FKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVE 938
Query: 245 KLFNEMRSHKCKPNIC-----------------------------------TYTALVNAF 269
+ +EM KP++ TY L+ +
Sbjct: 939 AMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMY 998
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH--------MGCEPDR 318
R+ EE + +++ AG+EP + Y +L+ ++ +L+ + GC+ DR
Sbjct: 999 CRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDR 1058
Query: 319 ASYNIMVDAYGRAGLH 334
+ Y+ M+ Y +G H
Sbjct: 1059 SFYHTMMKIYRNSGSH 1074
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ ++ +K + + E++ E TY ++ Y G E A ++R+M+ G
Sbjct: 402 LLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSG 461
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV Y ID L K +A + M +P+ +TY+ +I Y KA K A
Sbjct: 462 RNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAE 521
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F+ M +P+ Y+ +++ R + A +++++ GI D Y ++
Sbjct: 522 ETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTL 581
Query: 305 RLISRMH 311
R ++++
Sbjct: 582 RKVNKVE 588
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ ++G++ L ++AE + EL C Y ++K Y SG KAE +F M+ G
Sbjct: 1029 LVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAG 1088
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + G PQ+A ++ +K ST Y+ +I+ Y + + +
Sbjct: 1089 VEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGI 1148
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ +M+ +P+ +T + A + EA + LQ AG +
Sbjct: 1149 QKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAGFD 1195
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 30/236 (12%)
Query: 113 DPIVLMSC----VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
+ +V+M C + L E + L FT E L C+ E
Sbjct: 676 EALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENE-------------- 721
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETY 227
L+ +A VF +MR G+ S +Y S + K G P+ A + + D + Y
Sbjct: 722 LITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLY 781
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I YG+ A + +R + + AL+ A+A G E A IF +
Sbjct: 782 VNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMR 841
Query: 288 AGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
G P V N L++A + R+ MG + ++S +M+DA+ RAG
Sbjct: 842 DGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAG 897
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ + +A E+L++ PT TY+ L+ Y +G +AE F M +
Sbjct: 471 VLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRS 530
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+ P + Y+ +D L+ P++A+ +++ M D Y LM+ K +K
Sbjct: 531 GIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNK 586
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 29/217 (13%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P + TY+ ++ C + +EKA ++F EM++ G+ PS Y ID K G
Sbjct: 450 EMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAG 509
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q+A + F M C P+ TYT +I+ Y KA + +A +LF M CKPN+ TYT
Sbjct: 510 LIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYT 569
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIE-----------------PDVYAYNALM----- 301
AL++ + G E+A +I+ +++G IE P+V Y AL+
Sbjct: 570 ALIDGHCKAGQIEKACQIYARMRG-DIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCK 628
Query: 302 -----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA+ L+ M GCEP++ Y+ ++D + + G
Sbjct: 629 ANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIG 665
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E+L C P TY L+ AY + + A+ +F M
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD----------------CCQPSTETY 227
G P+ V Y + IDG K G +KA +I+ RM+ D C P+ TY
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA++ A +L + M +H C+PN Y A+++ F + G ++A+E+F ++
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P++Y Y++ + E
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDE 739
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AY+L+ +M GC P+ +Y M+D +G++G
Sbjct: 740 AYKLMLKMEEKGCNPNVVTYTAMIDGFGKSG 770
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 144 ELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD+ C P + Y ++ +C G L+ A+ VF +M + G P+ Y+S+ID L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K +++ +M + C P+ YT M++ K K+ A KL +M C PN+
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TYTA+++ F + G E+ E+F + G P+ Y L+ EAY+L+
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816
Query: 310 M 310
M
Sbjct: 817 M 817
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
E Y E+LD + + + + C +G ++A + EM G P Y+ I
Sbjct: 409 VEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIG 468
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +KA +F+ MKR+ PS TYT++I+ + KA A K F+EM C P
Sbjct: 469 FLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A+E+FE + G +P+V Y AL++ + ++ C+
Sbjct: 529 NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQ 586
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + +++A + M +G P+ +VY++ IDG K G Q A E+
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M P+ TY+ I+ K ++ + LK+ ++M + C PN+ YT +V+ +
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G +EA ++ +++ G P+V Y A+++ + ++ GC P+ +
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793
Query: 321 YNIMVDAYGRAGL 333
Y ++++ GL
Sbjct: 794 YRVLINHCCSNGL 806
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 16/192 (8%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA + E+ + +P+ TY +L+ ++C +GL+++A F EM G P+ V Y +
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS--- 252
I LK A E+F+ M + C+P+ TYT +I+ + KA + A +++ MR
Sbjct: 537 IHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIE 596
Query: 253 ------------HKCK-PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ C+ PN+ TY ALV+ + +EA E+ + + G EP+ Y+A
Sbjct: 597 SSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDA 656
Query: 300 LMEAYRLISRMH 311
+++ + I ++
Sbjct: 657 VIDGFCKIGKLQ 668
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM------SGLLEKAEAVFR 178
LI AY + + A + +++ C P Y + + + C S +L+ E +
Sbjct: 355 LIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYS 414
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ + V +++ L G +A +I M P TY+ +I AS
Sbjct: 415 EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDAS 474
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K A LF EM+ + P++ TYT L+++F + GL ++A + F+++ G P+V Y
Sbjct: 475 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYT 534
Query: 299 ALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKC 338
AL+ AY +M + GC+P+ +Y ++D + +AG E C
Sbjct: 535 ALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKAC 585
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P++ TY L++ + + L+ A V REM Y + + L KGG ++A ++
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDL 268
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ P T Y M++ +AS A+ + + MRS C PN+ TY L++ R
Sbjct: 269 IDEAEDFV--PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLR 326
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
+G + I + G P+ +N+L+ AY+L +M GC+P
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLV 386
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
YNI + G +E + S +++L K Y
Sbjct: 387 YNIFI---GSVCSNEEQPSSDILDLVEKAY 413
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 102/259 (39%), Gaps = 52/259 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ + SL ++A + S CIP TY +LL G L + + + M G
Sbjct: 285 MVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEG 344
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI------------- 231
P+ ++NS I K + A ++F++M + CQP Y + I
Sbjct: 345 CYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSD 404
Query: 232 --NLYGKASKSFM--------------------------ALKLFNEMRSHKCKPNICTYT 263
+L KA + A K+ EM P+ TY+
Sbjct: 405 ILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYS 464
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISR--------MHM 312
++ E+A +FE+++ GI P VY Y L++++ LI + +H
Sbjct: 465 KVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHK 524
Query: 313 GCEPDRASYNIMVDAYGRA 331
GC P+ +Y ++ AY +A
Sbjct: 525 GCTPNVVTYTALIHAYLKA 543
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 52/235 (22%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y ++ C + L E+A + MR P+ V Y + G L+ G +
Sbjct: 276 VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKR 335
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA-- 268
I M + C P+ E + +I+ Y K+ A KLF +M C+P Y + +
Sbjct: 336 ILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVC 395
Query: 269 -----------------------------------FAR----EGLCEEAEEIFEQLQGAG 289
FAR G ++A +I ++ G G
Sbjct: 396 SNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKG 455
Query: 290 IEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
PD Y+ ++ +A+ L M G P +Y I++D++ +AGL
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL 510
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 76/172 (44%), Gaps = 4/172 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ +G+ ++ + ++ C P TY +L+ C +GLL++A + EM++
Sbjct: 762 MIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTY 821
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + + I+G ++ + + + P Y ++I+ Y KA + +AL
Sbjct: 822 WPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL 879
Query: 245 KLFNEMRSHKCKP--NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
L E+ S N Y +L+ + ++A E++ + + P++
Sbjct: 880 DLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPEL 931
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 44/168 (26%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH-------------- 253
A+E R+K +PS TY +I ++ +A K A + EM S+
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAY 254
Query: 254 ------KCK-------------PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
KC+ P+ Y +V+ L EEA +I +++ + P+V
Sbjct: 255 SLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNV 314
Query: 295 YAYNALMEA----------YRLISRMHM-GCEPDRASYNIMVDAYGRA 331
Y L+ R++S M GC P+R +N ++ AY ++
Sbjct: 315 VTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKS 362
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ K+A E+ + C P+ TY L+ AY GLLE+A + +M + G
Sbjct: 145 LLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERG 204
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ Y + + G ++ G + A+ +F+ M+ C+P+ T+ +I ++G K +
Sbjct: 205 IKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMM 264
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F E++ C P+I T+ L+ F + G+ E +F++++ G P+ YN L+ AY
Sbjct: 265 KVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAY 324
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ RM G PD ++YN ++ A R GL E
Sbjct: 325 SRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWE 366
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 25/265 (9%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVL----MSCVSIL--------LIEAYGQKSLHKKA 138
PT T++ ++NV ++ + W+ I M IL LI + SL+++A
Sbjct: 66 PTLITYNVILNVYGKMGM--PWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ ++ +P + TY LL Y S +++A V REM G PS V YNS I
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISA 183
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ G ++A+E+ +M + TYT M++ + + K A+++F EMR+ CKPN
Sbjct: 184 YARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPN 243
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
ICT+ AL+ G E ++FE+++ PD+ +N L+ E +
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAG 332
M +G P+R +YN ++ AY R G
Sbjct: 304 EMKRVGFVPERDTYNTLISAYSRCG 328
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 103/194 (53%), Gaps = 11/194 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P E TY L+ L E+A AVF +M+ G P V YN+ +D K ++A+E
Sbjct: 101 LPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIE 160
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + M+ + C PS TY +I+ Y + A++L N+M K ++ TYTA+++ F
Sbjct: 161 VLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFV 220
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRA 319
R G E A +FE+++ AG +P++ +NAL+ E ++ + + C PD
Sbjct: 221 RTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIV 280
Query: 320 SYNIMVDAYGRAGL 333
++N ++ +G+ G+
Sbjct: 281 TWNTLLAVFGQNGM 294
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
A+++ G + A ++ + K G P Y S I + G ++AV +F++M+
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALK-LFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ C+P+ TY +++N+YGK + + LF M++ P+ TY L+ R L E
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMV 325
EA +FE ++ G PD YN L++ Y ++ M + GC P +YN ++
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 326 DAYGRAGLHE 335
AY R GL E
Sbjct: 182 SAYARDGLLE 191
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 47/228 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVE 210
P Y L+ A +G +A VF++M + G P+ + YN ++ K G P K
Sbjct: 31 PDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITG 90
Query: 211 IFQRMKR--------------DCCQ---------------------PSTETYTLMINLYG 235
+F+ MK CC+ P TY ++++YG
Sbjct: 91 LFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYG 150
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K+ + A+++ EM + C P+I TY +L++A+AR+GL EEA E+ Q+ GI+ DV+
Sbjct: 151 KSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVF 210
Query: 296 AYNALMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
Y A++ + R+ M GC+P+ ++N ++ +G G
Sbjct: 211 TYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRG 258
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSG----LLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
L L + C + +A+LLK + LL +AE F E+++ G P N+ I
Sbjct: 404 LALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAI 463
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ K EI MK PS TY ++ ++ ++ + ++ E+ + KP+
Sbjct: 464 YGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPD 523
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR--------- 309
I +Y ++ A+ R G +EA IF +++ +G+ PDV YN + +Y S
Sbjct: 524 IISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVC 583
Query: 310 --MHMGCEPDRASYNIMVDAY 328
+ GC+P++ +YN ++D Y
Sbjct: 584 YMIKHGCKPNQNTYNSVIDGY 604
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 20/252 (7%)
Query: 91 PTHATWDDLI----NVSVQLRLNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFT 141
P T++ LI N + K ++ I + CV + L+ +GQ + +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ +P DTY L+ AY G ++A A+++ M G+ P YN+ + L +
Sbjct: 302 FKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALAR 361
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG +++ +I M+ C+P+ T+ +++ Y + L L E+ S +P+
Sbjct: 362 GGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVL 421
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH------- 311
LV ++ L EAE F +L+ G PD+ NA++ Y +++++ +
Sbjct: 422 LKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMK 481
Query: 312 -MGCEPDRASYN 322
G P A+YN
Sbjct: 482 ESGFTPSLATYN 493
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + E+ C+P T+ LL + +G+ + VF+E
Sbjct: 245 CTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 304
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P YN+ I + G+ +A+ +++RM P TY ++ +
Sbjct: 305 MKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGL 364
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY-- 297
+ K+ EM+ CKPN T+ +L++A+A + E++ IEP
Sbjct: 365 WEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKT 424
Query: 298 --------NALMEAYR-LISRMHMGCEPDRASYNIMVDAYGR 330
+ L+EA R + G PD ++ N M+ YGR
Sbjct: 425 LVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGR 466
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A + L +++E E+ D C P E T+ LL AY + + A+ E+
Sbjct: 355 VLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGV 414
Query: 185 LPPSAVV------YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
+ P AV+ NS D LL+ A F +KR P T MI +YG+
Sbjct: 415 IEPHAVLLKTLVLVNSKCDLLLE------AERAFLELKRKGFSPDLSTLNAMIAIYGRRQ 468
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ N M+ P++ TY +L+ ++ E +EE+ +++ GI+PD+ +YN
Sbjct: 469 MVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYN 528
Query: 299 ALMEAYRLISRM----HM-------GCEPDRASYNIMVDAYGRAGLHE 335
++ AY RM H+ G PD +YN V +Y + E
Sbjct: 529 TVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFE 576
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Query: 85 AFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLE 144
++SL +A D L+ +++L+ I L ++ + + + A + E
Sbjct: 176 TYNSLISAYAR-DGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEE 234
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ + C P T+ L+K + G + VF E++ P V +N+ + + G
Sbjct: 235 MRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGM 294
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ +F+ MKR P +TY +I+ Y + A+ ++ M P++ TY A
Sbjct: 295 DSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNA 354
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRM 310
++ A AR GL E++E+I ++Q +P+ + +L+ AY + I RM
Sbjct: 355 VLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRM 403
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 20/320 (6%)
Query: 4 SNSTGVSVKKYNRDGFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLS 63
S +GV K+ R GF +++ ++N + RCGS Y GI P LS
Sbjct: 296 SEVSGV-FKEMKRVGFVPERD----TYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLS 350
Query: 64 PTAQQILRFVQR----EVDSNTIWDAFDSL-PPTHATWDDLINVSVQLRLNKKWDPIVLM 118
T +L + R E + + D + P T L++ + + +
Sbjct: 351 -TYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEE 409
Query: 119 SCVSIL---------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
C ++ L+ + L +AE +LEL P T ++ Y +
Sbjct: 410 ICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQM 469
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+ K + M++ G PS YNS + + N +++ E+ + + +P +Y
Sbjct: 470 VTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNT 529
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I Y + + A +F+EMR P++ TY V ++A + + EEA ++ + G
Sbjct: 530 VIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHG 589
Query: 290 IEPDVYAYNALMEAYRLISR 309
+P+ YN++++ Y ++R
Sbjct: 590 CKPNQNTYNSVIDGYCKLNR 609
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TYA+L+ +C + +EKA + EM + G PP Y S ID L + + A E+
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANEL 463
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ +K +C + S Y +MI +G + A+ LF E C P++ TY AL++ R
Sbjct: 464 FQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIR 523
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRAS 320
G+ +EA + ++ G PD+ ++N ++ A + ++M PD S
Sbjct: 524 AGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVS 583
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ RAG+ E
Sbjct: 584 YNTILSCLSRAGMFE 598
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 25/251 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ + A + E+ ++ PTE Y +L Y +E A + EM+ G
Sbjct: 236 LISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKG 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ Y I GL K G A +F M +D C+P +IN+ G+A + AL
Sbjct: 296 CAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDAL 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF +M S +C PN+ TY ++ A F + EA FE+++ GI P + Y L++
Sbjct: 356 KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDG 415
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE-------------GKCS 339
+ +R+ G P A+Y ++D+ GRA +E G+ S
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSS 475
Query: 340 YSLVELSVKHY 350
+ + +KH+
Sbjct: 476 ARVYAVMIKHF 486
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 12/226 (5%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + LI + L + T +++ S C ++ +LK + ++ KA +VF
Sbjct: 124 STTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFY 183
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKA 237
+++ P+A VYN+ I L+ G+ +K E++ + C P T TY+ +I+ +GK
Sbjct: 184 QIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKL 243
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A +LF+EM+ + P YT ++ + + E A + E+++G G P V+ Y
Sbjct: 244 ERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTY 303
Query: 298 NALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ +AY L M GC+PD N +++ GRAG
Sbjct: 304 TELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAG 349
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 23/258 (8%)
Query: 110 KKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSG 168
+K +P + IL++ G H+K Y E+ + C P TY+ L+ A+ G
Sbjct: 188 RKCNPTATVYNTLILMLMHEGH---HEKIHELYNEICSEGNCSPDTITYSALISAF---G 241
Query: 169 LLEKAEAVFR---EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
LE+ + FR EM++ GL P+ +Y + + K + A+ + + MK C P+
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TYT +I GK + A LF M CKP++ L+N R G E+A ++F ++
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 286 QGAGIEPDVYAYNALM-----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
P+V YN ++ EA +M G P +Y I++D + +
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 334 HEGKCSYSLVELSVKHYP 351
E K L E+ K +P
Sbjct: 422 VE-KALLLLEEMDEKGFP 438
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 146 LDS-RCIPTEDTYALLLKAYCMSGLLEKAEAV-FREMRKYGLPPSAVVYNSYIDGLLKGG 203
+DS +C P TY ++KA S A+ F +M+ G+ PS+ Y IDG K
Sbjct: 361 MDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTN 420
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+KA+ + + M P Y +I+ G+A + A +LF E++ + + + Y
Sbjct: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYA 480
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
++ F G +A ++F + + G PDVY YNALM EA+ L+ M
Sbjct: 481 VMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMREN 540
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD S+NI+++ + G
Sbjct: 541 GCTPDIKSHNIILNGLAKTG 560
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI++ G+ ++ A + EL ++ + YA+++K + G L A +F E K G
Sbjct: 447 LIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + G+++ G +A + + M+ + C P +++ +++N K A+
Sbjct: 507 CSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAI 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F +M+ + P+ +Y +++ +R G+ E A ++ +++ G E D Y++++EA
Sbjct: 567 EMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA- 625
Query: 305 RLISRMHMGCEP 316
+ ++ C P
Sbjct: 626 --VGKVDEDCSP 635
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 152 PTEDTYALLLKAYCMSGL---LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
P TY L+ YC G + KA+A+ +EM + + P++V +N IDG K N A
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAA 322
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+++F+ M+ +P+ TY ++N K A L +EM S KPN+ TY AL+N
Sbjct: 323 LKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALING 382
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPD 317
+ ++ L EEA E+F+ + G+ P+V +N L+ Y +M G P+
Sbjct: 383 YCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPN 442
Query: 318 RASYNIMVDAYGRAGLHE 335
++YN ++ + R G E
Sbjct: 443 ASTYNCLIVGFCREGKME 460
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A +++ EF Y E++ + P T+ ++ C G L KA V +M+ +G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260
Query: 185 LPPSAVVYNSYIDGLLKGGNPQ---KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P+ V YN+ IDG K G KA I + M + P++ T+ ++I+ + K
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
ALK+F EM+S KP + TY +LVN EG EA+ + +++ + ++P+V YNAL+
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380
Query: 302 EAY---RLISRMH--------MGCEPDRASYNIMVDAYGRAGLHE 335
Y +L+ G P+ ++N ++ Y + G E
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME 425
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 125/302 (41%), Gaps = 58/302 (19%)
Query: 89 LPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI--------LLIEAY---GQKSLHK 136
+ P T++ +IN ++ +LNK D + M LI+ Y G+
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA+ E+++++ P T+ +L+ +C L A VF EM+ GL P+ V YNS +
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF--------- 247
+GL G +A + M +P+ TY +IN Y K A +LF
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 248 ------NEMRSHKCK--------------------PNICTYTALVNAFAREGLCEEAEEI 281
N + CK PN TY L+ F REG EE + +
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465
Query: 282 FEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGR 330
++Q G++ D YN L+ A+ RLI M G +P +YNI+++ Y
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525
Query: 331 AG 332
G
Sbjct: 526 EG 527
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 26/268 (9%)
Query: 89 LPPTHATWDDLIN------------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
L PT T++ L+N V + L+ P V+ LI Y +K L +
Sbjct: 334 LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA---LINGYCKKKLLE 390
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + + P T+ LL YC G +E+A + + M + G P+A YN I
Sbjct: 391 EARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLI 450
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G + G ++ + M+ + T TY ++I+ + + + A +L +EM K
Sbjct: 451 VGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLK 510
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
P+ TY L+N + EG A + +Q++ G +V YN L++ Y
Sbjct: 511 PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGL 570
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRAGL 333
L + G P+R +Y I+ + G
Sbjct: 571 LNEMLEKGLIPNRTTYEIIKEEMMEKGF 598
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ +P TY L+ +C G +E+ + + EM+ G+ V YN I +
Sbjct: 434 MLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKE 493
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P+KA + M +PS TY +++N Y AL L +M N+ TY
Sbjct: 494 PKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNV 553
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPD 317
L+ + R+G E+A + ++ G+ P+ Y + E M G PD
Sbjct: 554 LIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE-----EMMEKGFLPD 601
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ A+C +KA + EM GL PS + YN ++G GN + A+ + ++M
Sbjct: 480 TYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQM 539
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ + TY ++I Y + K A L NEM PN TY + +G
Sbjct: 540 EKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599
Query: 276 EEAE 279
+ E
Sbjct: 600 PDIE 603
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 49/208 (23%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F+ Y S + N + L+K +++ M R P+ T+ +IN K
Sbjct: 183 FKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCK 242
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR------------------------- 271
K A + ++M+ PN+ TY L++ + +
Sbjct: 243 VGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPN 302
Query: 272 --------EGLCEE-----AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+G C++ A ++FE++Q G++P V YN+L+ EA L+
Sbjct: 303 SVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLD 362
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGLHE 335
M +P+ +YN +++ Y + L E
Sbjct: 363 EMLSSNLKPNVITYNALINGYCKKKLLE 390
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + +A + ++ C P TY L+ YC +E+A + E + G
Sbjct: 208 LIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG 267
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V + + I GL + G P A ++F+ + P+ TY ++++ K A
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAF 327
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
LF EM+ KPN+ YT L+++ + G ++ +E+F +L G++P+VY Y AL
Sbjct: 328 ALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387
Query: 301 ------MEAYRLISRMHM-GCEPDRASYNIMVDAY 328
+EA++L +M GC PD+ +YN+++ +
Sbjct: 388 CKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGF 422
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
L K+ EF +E +D ++L L+ +C ++ +V ++ K GL PS V
Sbjct: 84 LSKEIEFLGIE---------QDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVT 134
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
+ + ++GL G + + ++ M QP+ TY ++IN K+ K+ AL +M
Sbjct: 135 FTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQME 194
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-- 309
C PN+ Y+ L++ + G +EA +F+ + G P+VY Y +LM Y I R
Sbjct: 195 KVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIE 254
Query: 310 ---------MHMGCEPDRASYNIMVDAYGRAG 332
+ G PD ++ ++ RAG
Sbjct: 255 EAVQLLDETLRKGLVPDIVTFTTIISGLCRAG 286
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T+ LL CM G +++ ++ +M GL P+ YN I+ L K G +A+
Sbjct: 130 PSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGF 189
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++M++ C P+ Y+ +I+ Y + A +F+ M S C PN+ TYT+L+N + +
Sbjct: 190 LKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCK 249
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----EAYRLISRMHM-------GCEPDRAS 320
EEA ++ ++ G+ PD+ + ++ A R ++ + G P+ +
Sbjct: 250 IERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMT 309
Query: 321 YNIMVDAYGRAG 332
Y +++D + G
Sbjct: 310 YGVLLDGLCKHG 321
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ + SG +A ++M K G P+ V Y++ IDG G +A +
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M C P+ TYT ++N Y K + A++L +E P+I T+T +++ R
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCR 284
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRAS 320
G A+++F + G P++ Y L+ EA+ L M +P+
Sbjct: 285 AGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVI 344
Query: 321 YNIMVDAYGRAG-LHEGKCSYS 341
Y I++D+ + G + +GK +S
Sbjct: 345 YTILIDSLCKCGKIKDGKELFS 366
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +LL C G LE+A A+F+EM++ + P+ V+Y ID L K G + E+
Sbjct: 305 PNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKEL 364
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F R+ + +P+ TYT ++ K A KLF +M C P+ C Y ++ F +
Sbjct: 365 FSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQ 424
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A ++ E++ G D A AL+ +
Sbjct: 425 HKDPSMARQLVEEMVNRGFSADA-ATRALLNDF 456
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ A A FR M P V ++ +++ G+ + V + + ++ + + +++
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
IN + + L + +++ +P+I T+T L+N EG ++ +++ + G+
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163
Query: 291 EPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYG-RAGLHEGKC 338
+P+VY YN ++ EA + +M +GC P+ +Y+ ++D Y R + E +
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223
Query: 339 SYSLV 343
+ L+
Sbjct: 224 VFDLM 228
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ + K + + L+D P TY L+ A C GL+ +A +FR+M +
Sbjct: 347 ILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED 406
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
G P YN I G L+ +P A ++ + M
Sbjct: 407 GCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 156 TYALLLKAYCMSG-LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY ++L Y G ++ +++F+EM+ + P YN+ I ++ + Q+A+ +FQ
Sbjct: 250 TYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQE 309
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK C P+ TY ++++YGK A +L EM + PNI TY L+ A+AR GL
Sbjct: 310 MKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGL 369
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
C+EA + + L G+ PD + Y L+ A+ R C P+ +YNI
Sbjct: 370 CDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNI 429
Query: 324 MVDAYGR 330
++D YGR
Sbjct: 430 LIDIYGR 436
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ +HK+A +E+ + P TY L+ AY +GL ++A A+ + + G
Sbjct: 325 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 384
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + I + +KA+E F M++ C P+ TY ++I++YG+ K +
Sbjct: 385 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 444
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F M+ C P++ T+ +L+ +F G+ E +F +++ AG P V +N L+E Y
Sbjct: 445 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 504
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A Q S ++A + E+ ++ C P TY LL Y G+ ++A + EM G
Sbjct: 290 MITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAG 349
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YN I + G +A + + + P TY +I+ + +A + AL
Sbjct: 350 ISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKAL 409
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
+ F EMR C PNI TY L++ + R ++ ++F+ +Q PD+ +N+L+++
Sbjct: 410 ETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSF 469
Query: 304 ------------YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+R + R G P ++NI+++ YGR G
Sbjct: 470 GNCGMLTEVSNVFREMKR--AGYMPGVDTFNILIECYGRCG 508
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
AYC G+ +A+ ++ G P V+N+ I K G ++AV++ + +++ +P
Sbjct: 609 AYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKP 668
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
TY ++++YG+ + A ++ +EMR PN+ TY L+ ++ + G ++A +F
Sbjct: 669 DGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVF 728
Query: 283 EQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+ A + PD + +N L+ EA +I M GC+P + ++ ++D Y R
Sbjct: 729 GDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 12/222 (5%)
Query: 124 LLIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++++ YG++ + + + E+ D P + TY ++ A + ++A +F+EM++
Sbjct: 253 VMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKE 312
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P+ V YN+ +D KGG ++A E+ M+ P+ TY +I Y +A
Sbjct: 313 AGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDE 372
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L + S P+ TY L++AF R E+A E F +++ P++ YN L++
Sbjct: 373 AAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILID 432
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
Y + ++ C PD ++N ++ ++G G+
Sbjct: 433 IYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGM 474
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + ++KA T+ E+ + C P TY +L+ Y L+ VF+ M++
Sbjct: 395 LISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKN 454
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V +NS + G + +F+ MKR P +T+ ++I YG+ ++
Sbjct: 455 CTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSV 514
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ + +P + T+ AL+ + AREG ++ E++ +++ AG++ + L+ +Y
Sbjct: 515 DIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSY 574
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
LE + + T+ +KA G +KA VF +RK+ V + I +L
Sbjct: 130 LEFIAGELVLTDSELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVL-- 187
Query: 203 GNPQK---AVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
GN ++ A+E+F+ +K+D YT +I++ +A + + LF M+ + N
Sbjct: 188 GNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGN 247
Query: 259 ICTYTALVNAFAREGLC-EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
TY +++ + + G + + +F++++ I PD Y YN ++ EA RL
Sbjct: 248 AVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLF 307
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
M GC P+R +YN ++D YG+ G+H+ + S LVE+
Sbjct: 308 QEMKEAGCCPNRVTYNALLDVYGKGGMHK-EASELLVEM 345
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 49/273 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIE YG+ + Y LL + PT T+A L+ + G ++ E V +EM +
Sbjct: 499 ILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 558
Query: 184 GL------------------------------------PPSAVVYNSYIDGLLKGGNPQK 207
GL P S ++ +++ K G +
Sbjct: 559 GLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNE 618
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ + P + + MI++ K A+KL E+R + KP+ TY L++
Sbjct: 619 AQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMS 678
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EP 316
+ REG+ +AEE+ +++ AG P++ YN L+ +Y RM P
Sbjct: 679 MYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP 738
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
D ++N +V +Y GL+ K + S++E +H
Sbjct: 739 DNFTFNTLVGSYSSLGLY--KEALSVIEYMTEH 769
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P+ + C + +L AY + + +A+ +L D+ P + ++ G +E+A
Sbjct: 597 PLSGILCKTFVL--AYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERA 654
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ E+RK L P V YN + + G KA E+ M+R P+ TY ++
Sbjct: 655 VKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYS 714
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
Y K + A ++F +M + + +P+ T+ LV +++ GL +EA + E + G +P
Sbjct: 715 YTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPT 774
Query: 294 VYAYNALMEAY 304
+ AL++ Y
Sbjct: 775 QITFKALLDGY 785
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 49/259 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ YG+ + + + C P T+ LLK++ G+L + VFREM++
Sbjct: 429 ILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 488
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL-------------- 229
G P +N I+ + G +V+I++ + R QP+ T+
Sbjct: 489 GYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQC 548
Query: 230 ---------------------MINLYGKASKSFMALKLFNEMRSHKCKP--NICTYTALV 266
+I+ Y + + F K +E+ +P I T V
Sbjct: 549 EKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKT-FV 607
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CE 315
A+ + G+ EA+ QL G PD+ +NA++ A +L+ + +
Sbjct: 608 LAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLK 667
Query: 316 PDRASYNIMVDAYGRAGLH 334
PD +YN ++ YGR G++
Sbjct: 668 PDGVTYNCLMSMYGREGMY 686
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ ++ P TY L+ Y G+ KAE V EMR+ G P+ + YN+ + K G
Sbjct: 660 EIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHG 719
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +F M +P T+ ++ Y AL + M H C+P T+
Sbjct: 720 RMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFK 779
Query: 264 ALVNAFAR 271
AL++ + R
Sbjct: 780 ALLDGYNR 787
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG++ ++ KAE E+ + P TY LL +Y G ++ A VF +M
Sbjct: 676 LMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAAR 735
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ P +N+ + G ++A+ + + M CQP+ T+ +++ Y +
Sbjct: 736 VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 126/251 (50%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+ + ++R +V + L+ A + L +AE + +++ +P
Sbjct: 235 WEGLLGLFAEMRHEGVQPDLVTYNT----LLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ +++ + G LEK + +EM G P YN I+ K G+ ++A+++F++M
Sbjct: 291 TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY++++NLYGK + +LF +M+ +P+ TY L+ F G
Sbjct: 351 QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYF 410
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+E +F L I+P++ Y L+ +A +++ M+ G P +Y+ +
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGL 470
Query: 325 VDAYGRAGLHE 335
++AYG+A L++
Sbjct: 471 IEAYGQAALYD 481
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLLEK +F EM G+ S Y + I+ + G + ++
Sbjct: 144 CKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSL 203
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ +RMKR+ P+ TY +IN + + L LF EMR +P++ TY L++A
Sbjct: 204 ELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSA 263
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
A GL +EAE +F+ + GI P++ Y+ ++E + + ++ G PD
Sbjct: 264 CAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPD 323
Query: 318 RASYNIMVDAYGRAG 332
+SYN++++A+ + G
Sbjct: 324 ISSYNVLIEAHAKLG 338
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ + +L++ +S P TY +L++ + G ++ +F ++
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE 423
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ Y + KGG + A +I M PS++ Y+ +I YG+A+ A
Sbjct: 424 NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEA 483
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L FN M K I TY +L++ FAR GL +E E I +++ GI + +++ ++E
Sbjct: 484 LVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEG 543
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRAGL 333
YR + M CE D + ++ Y AGL
Sbjct: 544 YRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGL 584
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I G++ L +K + E+ I + +Y L+ AY +G E + + M
Sbjct: 150 IYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERM 209
Query: 181 RKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
++ + P+ + YN+ I+ +G + + + +F M+ + QP TY +++
Sbjct: 210 KRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGL 269
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +F M P I TY+ +V F + G E+ + ++++ G PD+ +YN
Sbjct: 270 GDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNV 329
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
L+EA+ + + GC P+ ++Y+I+++ YG+ G ++
Sbjct: 330 LIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYD 376
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
+ ++L+ K + G +++ +F+ M R+ P+ +Y I L + G +K EIF
Sbjct: 113 NDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFD 172
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M S +YT +IN YG+ + +L+L M+ + PNI TY ++NA AR
Sbjct: 173 EMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGD 232
Query: 274 L-CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
L E +F +++ G++PD+ YN L+ EA + M G P+ +Y
Sbjct: 233 LDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTY 292
Query: 322 NIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+ +V+ +G+ G E K + L E+ + Y
Sbjct: 293 SYIVETFGKLGKLE-KVAMLLKEMESEGY 320
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A G+ LH+ A+ + +P+ Y+ L++AY + L ++A F M + G
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG 494
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ YNS I +GG ++ I RM+ + ++++ +I Y ++ + A+
Sbjct: 495 SKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAI 554
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K F EM +C+ + T ++ + GL +E++E F +++ +GI P V Y ++ Y
Sbjct: 555 KAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVY 614
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 87/161 (54%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIEAYGQ +L+ +A + + + T DTY L+ + GL ++ EA+ MR+YG
Sbjct: 470 LIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYG 529
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ +A ++ I+G + G ++A++ F M++ C+ +T ++ +Y A +
Sbjct: 530 ISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESK 589
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+ F E+++ P++ Y ++ +A+ G ++A E+ +++
Sbjct: 590 EQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM 630
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ D P E TY+LL+ AY +G E A + +EM G
Sbjct: 312 LLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 371
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G+ QKA + + M QP Y +MI+ +GK + A+
Sbjct: 372 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAM 431
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
FN MR +P++ T+ L++A + G + A E+FE+++ + P YN ++
Sbjct: 432 DAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLL 491
Query: 302 -EAYR------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
E R ++S M G P+ +Y +VD YGR+G
Sbjct: 492 GEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSG 530
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F MR+ G+ P V +N+
Sbjct: 393 QKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTL 452
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A+E+F+ M+ C P T TY +MINL G+ + + +EM+
Sbjct: 453 IDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGL 512
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PNI TYT LV+ + R G +EA E E ++ G++P Y+AL+ AY
Sbjct: 513 VPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAY 561
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A G +AE +LE L P Y LLK Y G L+ AE V EM
Sbjct: 276 LISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDC 335
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G K+
Sbjct: 336 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 395
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM + +P+ Y +++ F + A + F +++ GIEPDV +N L
Sbjct: 396 FAVLR---EMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTL 452
Query: 301 MEAYR----------LISRM-HMGCEPDRASYNIMVDAYG 329
++A+R L M C P +YNIM++ G
Sbjct: 453 IDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLG 492
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 20/227 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
LI A+ + +L A L+LL S P + L+ A +G + +AEA+F E
Sbjct: 241 LISAFARAALPDAA----LDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEF 296
Query: 181 RKYG-LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G + P YN+ + G +K G+ + A ++ M P TY+L+++ Y +A +
Sbjct: 297 FLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGR 356
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A L EM + KP+ ++ ++ F G ++A + ++ +G++PD + YN
Sbjct: 357 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNV 416
Query: 300 LMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+++ + +RM G EPD ++N ++DA+ + G H+
Sbjct: 417 MIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHD 463
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G++ E E+ + +P TY L+ Y SG ++A M+
Sbjct: 486 IMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKAD 545
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS +Y++ ++ + G A+ + + M+ D + ST ++N +G+ + A
Sbjct: 546 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEA 605
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ + +P++ TYT L+ A R ++ I+E++ +G PD A L A
Sbjct: 606 FSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKARAMLRSA 665
Query: 304 YR 305
R
Sbjct: 666 LR 667
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC----CQPSTETYTLMINLYG 235
+R++G P Y+ + LL +P A I +R+ D +P ++ +I+ +
Sbjct: 188 IREHGFLPDLASYSHLLASLLNTRDPPDAA-ILERLLGDLRESRLEPDAPLFSDLISAFA 246
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDV 294
+A+ AL L ++ P TAL++A G EAE +F + AG I+P
Sbjct: 247 RAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRT 306
Query: 295 YAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I + G PD A+Y+++VDAY RAG
Sbjct: 307 RAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAG 355
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E+ C P+ TY LL AY + + +A +F M
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ + Y++ +DGL K G QKA E++ +M D P+ TY
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I+ KA K A +L + M S+ C+PN Y AL++ F + G + A+E+F ++
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G P V+ Y +L++A +++S+M C P+ +Y M+D R G
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIG 730
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + + A+ + M G P+ ++Y++ IDG K G A E+
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RM + P+ TYT +I+ K + +A+K+ ++M C PN+ TYTA+++ R
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G C++A ++ ++ G P+V Y +L++ + +L ++M GC P+ +
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y ++++ AGL + S L E+ ++P
Sbjct: 789 YRVLINHCCAAGLLDEAHSL-LSEMKQTYWP 818
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 27/209 (12%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY+ ++ C + +EKA +F+EM+ G+ P Y ID K G ++A
Sbjct: 452 VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARS 511
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F M+ C PS TYT +++ Y K + A +F+ M C PN TY+ALV+
Sbjct: 512 WFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLC 571
Query: 271 REGLCEEAEEIFEQLQGA----------------GIEPDVYAYNALME----AYRLISRM 310
+ G ++A E++ ++ G I P+V Y AL++ A++++
Sbjct: 572 KAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 631
Query: 311 HM-------GCEPDRASYNIMVDAYGRAG 332
+ GCEP+ Y+ ++D + + G
Sbjct: 632 ELLDVMSSNGCEPNHIIYDALIDGFCKVG 660
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 144 ELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD + C P Y L+ +C G L+ A+ VF M K G P+ Y S ID +
Sbjct: 632 ELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAM 691
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K A+++ +M C P+ TYT MI+ + + ALKL + M C PN+
Sbjct: 692 FKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNV 751
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TYT+L++ + G + + ++F Q+ G P+ Y L+ EA+ L+S
Sbjct: 752 VTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 811
Query: 310 M 310
M
Sbjct: 812 M 812
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ + + +PT TY L+ A L+ A V +M +
Sbjct: 652 LIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESS 711
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDGL + G QKA+++ M++ C P+ TYT +I+ GK+ K M+L
Sbjct: 712 CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSL 771
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF +M + C PN TY L+N GL +EA + +++ V Y ++++ +
Sbjct: 772 QLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF 831
Query: 305 --RLISRMHM-------GCEPDRASYNIMVDAYGRAGLHE 335
+ I+ + + G Y +++D++ +AG E
Sbjct: 832 SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLE 871
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L S C+ + A + C G +KA + + M + G P Y+ I
Sbjct: 404 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVIT 463
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + +KA +FQ MK P TYT++I+ + K A F+EM S C P
Sbjct: 464 FLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSP 523
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
++ TYTAL++A+ + +A +IF ++ AG P+ Y+AL++ CE
Sbjct: 524 SVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACE 581
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 145/393 (36%), Gaps = 103/393 (26%)
Query: 41 GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRF-VQREV-------DSNTIWDAFDSLPPT 92
G L+ G++ + + VL+ Q + F VQ+E+ D T+ F
Sbjct: 196 GRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTV-GCFAQALCK 254
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
W D + V ++ R + K D ++ +S L+ + SL +A + + CIP
Sbjct: 255 EGRWSDAL-VMIE-REDFKLDTVLCTQMISGLM-----EASLFDEAISFLHRMRCNSCIP 307
Query: 153 TEDTYALLL-----------------------------------KAYCMSGLLEKAEAVF 177
TY LL +YC + A +
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKG----------------------------------- 202
M G PP VVYN +I + G
Sbjct: 368 NRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 427
Query: 203 ------GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G KA +I + M R P T TY+ +I +A K A LF EM+S
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVI 487
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P++ TYT L+++F + GL E+A F++++ G P V Y AL+ AY +
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
RM GC P+ +Y+ +VD +AG + C
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 36/202 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK-- 182
LI+ G+ + + +++ C P TY +L+ C +GLL++A ++ EM++
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 816
Query: 183 -------------------------------YGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
+G+ A VY ID K G +KA+E+
Sbjct: 817 WPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALEL 876
Query: 212 FQRMKRDCCQ---PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ M S +TYT +I AS+ A +L++E+ P + + L+
Sbjct: 877 HKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKG 936
Query: 269 FAREGLCEEAEEIFEQLQGAGI 290
+ EA ++ + G+
Sbjct: 937 LIKVNKWNEALQLCYSMCDEGV 958
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLD---SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
LLI+++ + +KA + E+++ S I ++DTY L++A C++ LEKA ++ E+
Sbjct: 859 LLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEI 918
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ G+ P + I GL+K +A+++ M
Sbjct: 919 TRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 126/251 (50%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+ + ++R +V + L+ A + L +AE + +++ +P
Sbjct: 235 WEGLLGLFAEMRHEGVQPDLVTYNT----LLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ +++ + G LEK + +EM G P YN I+ K G+ ++A+++F++M
Sbjct: 291 TYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C P+ TY++++NLYGK + +LF +M+ +P+ TY L+ F G
Sbjct: 351 QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYF 410
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+E +F L I+P++ Y L+ +A +++ M+ G P +Y+ +
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGL 470
Query: 325 VDAYGRAGLHE 335
++AYG+A L++
Sbjct: 471 IEAYGQAALYD 481
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLLEK +F EM G+ S Y + I+ + G + ++
Sbjct: 144 CKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSL 203
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ +RMKR+ P+ TY +IN + + L LF EMR +P++ TY L++A
Sbjct: 204 ELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSA 263
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
A GL +EAE +F+ + GI P++ Y+ ++E + + ++ G PD
Sbjct: 264 CAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPD 323
Query: 318 RASYNIMVDAYGRAG 332
+SYN++++A+ + G
Sbjct: 324 ISSYNVLIEAHAKLG 338
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ + +L++ +S P TY +L++ + G ++ +F ++
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE 423
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ Y + KGG + A +I M PS++ Y+ +I YG+A+ A
Sbjct: 424 NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEA 483
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L FN M K I TY +L++ FAR GL +E E I +++ GI + +++ ++E
Sbjct: 484 LVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEG 543
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRAGL 333
YR + M CE D + ++ Y AGL
Sbjct: 544 YRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGL 584
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I G++ L +K + E+ I + +Y L+ AY +G E + + M
Sbjct: 150 IYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERM 209
Query: 181 RKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
++ + P+ + YN+ I+ +G + + + +F M+ + QP TY +++
Sbjct: 210 KRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGL 269
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +F M P I TY+ +V F + G E+ + ++++ G PD+ +YN
Sbjct: 270 GDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNV 329
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
L+EA+ + + GC P+ ++Y+I+++ YG+ G ++
Sbjct: 330 LIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYD 376
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
+ ++L+ K + G +++ +F+ M R+ P+ +Y I L + G +K EIF
Sbjct: 113 NDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFD 172
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M S +YT +IN YG+ + +L+L M+ + PNI TY ++NA AR
Sbjct: 173 EMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGD 232
Query: 274 L-CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
L E +F +++ G++PD+ YN L+ EA + M G P+ +Y
Sbjct: 233 LDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTY 292
Query: 322 NIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+ +V+ +G+ G E K + L E+ + Y
Sbjct: 293 SYIVETFGKLGKLE-KVAMLLKEMESEGY 320
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A G+ LH+ A+ + +P+ Y+ L++AY + L ++A F M + G
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG 494
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ YNS I +GG ++ I RM+ + ++++ +I Y ++ + A+
Sbjct: 495 SKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAI 554
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K F EM +C+ + T ++ + GL +E++E F +++ +GI P V Y ++ Y
Sbjct: 555 KAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVY 614
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 87/161 (54%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIEAYGQ +L+ +A + + + T DTY L+ + GL ++ EA+ MR+YG
Sbjct: 470 LIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYG 529
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ +A ++ I+G + G ++A++ F M++ C+ +T ++ +Y A +
Sbjct: 530 ISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESK 589
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+ F E+++ P++ Y ++ +A+ G ++A E+ +++
Sbjct: 590 EQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM 630
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 16/228 (7%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+++C S LI + KA L DS +P TY +L+ YC +G + A +
Sbjct: 145 IIACTS--LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
M + P V YN+ + L G ++A+E+ R + C P TYT++I K
Sbjct: 203 LDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK 259
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
S A+KL +EMR CKP++ TY L+N +EG +EA + G +P+V
Sbjct: 260 ESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVIT 319
Query: 297 YNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+N + M+A + ++ M GC P ++NI+++ R GL
Sbjct: 320 HNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGL 367
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L +A ++ C P +Y LL A C +E+A M
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L K G AVEI ++ C P TY +I+ K K+ A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+KL +EM+ KP+I TY+ LV +REG +EA F L+ G++P+ YN++M
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536
Query: 302 -----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
+ R I + GC+P SY I+++ GL
Sbjct: 537 LCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGL 577
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD + C P TY +L++A C + +A + EMR G P V YN I+G
Sbjct: 232 MEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLING 291
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ K G +A+ M CQP+ T+ +++ + A K EM C P+
Sbjct: 292 ICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPS 351
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH 311
+ T+ L+N R+GL A ++ E++ G P+ +YN L+ A R I +
Sbjct: 352 VVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLD 411
Query: 312 M----GCEPDRASYNIMVDAYGRAG 332
+ GC PD +YN ++ A + G
Sbjct: 412 IMVSRGCYPDIVTYNTLLTALCKDG 436
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ ++L++ C +G AE EM + G PS V +N I+ L + G +A+
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M + C P++ +Y +++ K K A++ + M S C P+I TY L+ A
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
++G + A EI QL G P + YN ++ +A +L+ M G +PD
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492
Query: 319 ASYNIMVDAYGRAG 332
+Y+ +V R G
Sbjct: 493 ITYSTLVGGLSREG 506
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEA ++S +A E+ D C P TY +L+ C G L++A M Y
Sbjct: 252 ILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSY 311
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N + + G A + M R C PS T+ ++IN + A
Sbjct: 312 GCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRA 371
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+ + +M H C PN +Y L++A ++ E A E + + G PD+ YN L+
Sbjct: 372 IDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTA 431
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A +++++ GC P +YN ++D + G
Sbjct: 432 LCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVG 471
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E++ C P+ T+ +L+ C GL+ +A V +M ++G P+++ YN +
Sbjct: 336 AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L K ++A+E M C P TY ++ K K +A+++ N++ S C P
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------EAYRLISRM 310
+ TY +++ ++ G ++A ++ ++++G G++PD+ Y+ L+ + I+
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515
Query: 311 H----MGCEPDRASYN 322
H MG +P+ +YN
Sbjct: 516 HDLEEMGVKPNAITYN 531
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 36/185 (19%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YL+++ SR C P TY LL A C G ++ A + ++ G P + YN+ IDGL
Sbjct: 409 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLS 468
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G A+++ MK +P TY+ ++ + K A+ F+++ KPN
Sbjct: 469 KVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAI 528
Query: 261 TYTA-----------------------------------LVNAFAREGLCEEAEEIFEQL 285
TY + L+ A EGL +EA E+ +L
Sbjct: 529 TYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588
Query: 286 QGAGI 290
G+
Sbjct: 589 CSRGV 593
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N+++ L++ G ++ + + M P T +I K K++ A ++ +
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
P++ TY L++ + + G A ++ +++ + PDV YN ++ E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKE 230
Query: 303 AYRLISR-MHMGCEPDRASYNIMVDA 327
A ++ R M C PD +Y I+++A
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEA 256
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 28/299 (9%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHAT-------WDDLINVSVQLRLNK 110
I P++ +Q ++ +D+ ++D F TH T D L+ ++ K
Sbjct: 755 ILPLIRVLCKQ-----KKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALK 809
Query: 111 KWDPIVLMSCVSI-----LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+ + C LL++A+G+ + Y E+L C P T+ +++ A
Sbjct: 810 LFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
S + KA ++ E+ P+ Y I GLLK G ++A++IF+ M C+P+
Sbjct: 870 KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
Y ++IN +GKA +A LF M +P++ +YT LV G ++A FE+L
Sbjct: 930 IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL 989
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+ G++PD +YN ++ EA L S M + G P+ +YN ++ +G AG+
Sbjct: 990 KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 46/244 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I A + + KA Y E++ PT TY L+ +G E+A +F EM Y
Sbjct: 863 IIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDY 922
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT--------------- 228
P+ +YN I+G K GN A ++F+RM ++ +P ++YT
Sbjct: 923 QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDA 982
Query: 229 --------------------LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
LMIN GK+ + AL LF+EM++ P + TY AL+
Sbjct: 983 VHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILH 1042
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
F G+ ++A ++FE+LQ G+EP+V+ YNAL+ A+ + +M + GC P+
Sbjct: 1043 FGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPN 1102
Query: 318 RASY 321
++
Sbjct: 1103 AGTF 1106
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L++A C SG +++A + MR G+ P+ YN+ I GLL +A+E+
Sbjct: 365 PDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALEL 424
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ P+ +Y L I+ YGK AL F +M+ P+I A + + A
Sbjct: 425 FNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAE 484
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G EA++IF + G+ PD YN +M+ Y +L++ M GCEPD
Sbjct: 485 MGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIV 544
Query: 321 YNIMVDAYGRAG 332
N ++D +AG
Sbjct: 545 VNSLIDTLYKAG 556
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++K Y +G ++KA + EM G P +V NS ID L K G +A ++
Sbjct: 505 PDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQM 564
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F R+K P+ TY ++I GK K AL LF M+ C PN T+ AL++ +
Sbjct: 565 FGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCK 624
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
+ A ++F ++ PDV YN ++ Y LI G
Sbjct: 625 NDAVDLALKMFCRMTIMNCSPDVLTYNTII--YGLIKEGRAG 664
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT +Y L + Y G EKA F +M+K G+ PS N+ + L + G ++A +I
Sbjct: 435 PTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDI 494
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F + P + TY +M+ Y KA + A KL EM S C+P+I +L++ +
Sbjct: 495 FNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYK 554
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPDRAS 320
G +EA ++F +L+ + P V YN L++A L M GC P+ +
Sbjct: 555 AGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVT 614
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+N ++D C V+L++K +
Sbjct: 615 FNALLDCL---------CKNDAVDLALKMF 635
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + ++ +G ++ A + + M G P V Y ID L G KA E+
Sbjct: 260 PNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKEL 319
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ +M+ +P TY +++ +G + ++EM + P++ TYT LV A +
Sbjct: 320 YTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCK 379
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G ++A ++ + ++ GI P+++ YN L+ EA L + M +G P S
Sbjct: 380 SGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439
Query: 321 YNIMVDAYGRAG 332
Y + +D YG+ G
Sbjct: 440 YVLFIDYYGKLG 451
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 63 SPTAQQILRFVQREVDSNTIWDAFDSLP--------PTHATWDDLINVSVQLR-LNKKWD 113
+P V+ S + AFD L P T++ LI+ + LR L++ +
Sbjct: 364 APDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALE 423
Query: 114 PIVLMSCVSI--------LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
M + + L I+ YG+ +KA T+ ++ +P+ L +
Sbjct: 424 LFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLA 483
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
G + +A+ +F ++ GL P +V YN + K G KA ++ M + C+P
Sbjct: 484 EMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDII 543
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+I+ KA + A ++F ++ K P + TY L+ +EG +A ++F +
Sbjct: 544 VVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSM 603
Query: 286 QGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
+ +G P+ +NAL++ A ++ RM M C PD +YN ++ YG +
Sbjct: 604 KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII--YGL--IK 659
Query: 335 EGKCSYSL 342
EG+ Y+
Sbjct: 660 EGRAGYAF 667
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A KA+ Y ++ S P TY L+ + G LE + + EM
Sbjct: 302 VLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEAD 361
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y ++ L K G +A ++ M+ P+ TY +I+ + A
Sbjct: 362 GYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEA 421
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA---- 299
L+LFN M S P +Y ++ + + G E+A + FE+++ GI P + A NA
Sbjct: 422 LELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYS 481
Query: 300 ------LMEAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ EA + + +H G PD +YN+M+ Y +AG
Sbjct: 482 LAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAG 521
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+TY + KA + G + +A +MR+ G +A YN I LL+ G ++A+++++R
Sbjct: 158 NTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKR 217
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + +PS +TY+ ++ G+ + + L EM + +PNI TYT + R G
Sbjct: 218 MISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMGC-EPDRASYNI 323
++A I + ++ G PDV Y L++A L ++M +PD +Y
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337
Query: 324 MVDAYGRAG 332
++ +G G
Sbjct: 338 LMSKFGNYG 346
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +G+ A + ++ P +Y +L++ M+G ++ A F E++
Sbjct: 933 ILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLT 992
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V YN I+GL K ++A+ +F MK P TY +I +G A A
Sbjct: 993 GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
K+F E++ +PN+ TY AL+ ++ G + A +F+++ G P+ + L
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P TY +L+ A C +G L+KA+ ++ +MR P V Y + + G+ +
Sbjct: 290 DEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLE 349
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+ M+ D P TYT+++ K+ K A + + MR PN+ TY L+
Sbjct: 350 TVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLI 409
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +EA E+F ++ G+ P Y+Y ++ Y
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 20/195 (10%)
Query: 158 ALLLKAYCMSGLL---------EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+L AY +GL+ ++A V++ M GL PS Y++ + L + +
Sbjct: 187 GFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTI 246
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+++ + M+ +P+ TYT+ I + G+A + A + M C P++ TYT L++A
Sbjct: 247 MDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDA 306
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPD 317
G ++A+E++ +++ + +PD+ Y LM + R S M G PD
Sbjct: 307 LCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPD 366
Query: 318 RASYNIMVDAYGRAG 332
+Y I+V+A ++G
Sbjct: 367 VVTYTILVEALCKSG 381
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ Y + KA E+L C P L+ +G +++A +F ++
Sbjct: 512 MMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL 571
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ V YN I GL K G KA+++F MK C P+T T+ +++ K +A
Sbjct: 572 KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLA 631
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
LK+F M C P++ TY ++ +EG A + Q++
Sbjct: 632 LKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK 674
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L D + PT TY +L+ G L KA +F M++ G PP+ V +N+ +D L K
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA 627
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++F RM C P TY +I K ++ A +++M+ ++ YT
Sbjct: 628 VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYT- 686
Query: 265 LVNAFAREGLCEEAEEI-FEQLQGAGIEPDVYAYNALME 302
L+ ++G E+A +I E + +G++ + LME
Sbjct: 687 LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELME 725
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L++ S LE+A ++F EM+ G+ P YN+ I G +A ++
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
F+ ++ +P+ TY +I + K+ A +F +M C PN T+ L N
Sbjct: 1056 FEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I G+ ++A + E+ + P TY L+ + +G++++A +F E++
Sbjct: 1003 LMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFM 1062
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ YN+ I G K GN +A +F++M C P+ T+ + N
Sbjct: 1063 GLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 53/258 (20%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI G++ KA + + +S C P T+ LL C + ++ A +F M
Sbjct: 582 ILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIM 641
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P + YN+ I GL+K G A + +MK+ YTL+ + K + A
Sbjct: 642 NCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVV-KDGRVEDA 700
Query: 244 LKLFNEMRSHK---------------------------------CKPNICTYTALVNAFA 270
+K+ E C +IC L+
Sbjct: 701 IKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCN-SICQDDNLILPLI 759
Query: 271 REGLCEE-----AEEIFEQL-QGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
R LC++ A+++F++ + G P +YN LM+ A +L M + G
Sbjct: 760 RV-LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAG 818
Query: 314 CEPDRASYNIMVDAYGRA 331
C P+ +YN+++DA+G++
Sbjct: 819 CCPNIFTYNLLLDAHGKS 836
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C G +EKA+ +F EM K+GL + Y I GL K G ++ E+
Sbjct: 196 PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M+ D P+ TY ++N + K ++ A KLF+EMR NI TY L+ R
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
E EA ++ +Q++ GI P++ YN L++ + + ++ G P +
Sbjct: 316 EMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 321 YNIMVDAYGRAGLHEG 336
YNI+V + + G G
Sbjct: 376 YNILVSGFCKKGDTSG 391
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 101/188 (53%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ +++K C +G +EK+ + E+R++G P+ V+Y + IDG K G +KA ++F M
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEM 224
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TYT++I+ K +++ +M+ PN+ TY ++N ++G
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRT 284
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
++A ++F++++ G+ ++ YN L+ EA +++ +M G P+ +YN +
Sbjct: 285 KDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTL 344
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 345 IDGFCGVG 352
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C +A V +M+ G+ P+ + YN+ IDG G KA+ + + +
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K PS TY ++++ + K + A K+ EM KP+ TYT L++ FAR
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNM 424
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E+A ++ ++ G+ PDV+ Y+ L+ EA RL M EP++ YN M
Sbjct: 425 EKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTM 484
Query: 325 VDAYGRAG 332
V Y + G
Sbjct: 485 VLGYCKEG 492
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + K+ Y ++ + P TY ++ +C G + A +F EMR+
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRER 297
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V YN+ I GL + +A ++ +MK D P+ TY +I+ + K A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L L +++S P++ TY LV+ F ++G A ++ ++++ GI+P Y L++
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT 417
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAY 328
+ + M +G PD +Y++++ +
Sbjct: 418 FARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGF 453
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C G L KA ++ R+++ GL PS V YN + G K G+ A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +PS TYT++I+ + + A++L + M P++ TY+ L++ F
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+G EA +F+ + +EP+ YN ++ Y RL M P+ AS
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515
Query: 321 YNIMVDA 327
Y M++
Sbjct: 516 YRYMIEV 522
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + +K A E+ + P++ TY +L+ + +EKA + M +
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P Y+ I G G +A +F+ M +P+ Y M+ Y K S+ A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRA 497
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+LF EM + PN+ +Y ++ +E +EAE + E++ GI+P N + A
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 45/219 (20%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS---------------------- 194
Y +++ AY S L+ + + F EM G P + +N+
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156
Query: 195 ------------YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
I G + G +K+ ++ ++ P+ YT +I+ K +
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A LF EM N TYT L++ + G+ ++ E++E++Q G+ P++Y YN +M
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+A++L M G + +YN ++ R
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCR 315
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 113/219 (51%), Gaps = 12/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI + + + A+ +L++ ++ CIP TY LL AY SG +++ +++EM +
Sbjct: 792 LLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFM 242
P+ + +N I GL+K GN A++++ + D P+ TY +I+ K+ + +
Sbjct: 852 ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +LF M + C+PN Y L+N F + G + A +F+++ G+ PD+ Y+ L++
Sbjct: 912 AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 971
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGR 330
++ R+ G PD YN++++ G+
Sbjct: 972 CLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGK 1010
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 135 HKKAEFTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAE 174
HK TY+ LLD +P T+ +L+ A C +G +A
Sbjct: 326 HKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 385
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A MR G+ P+ YN+ I GLL+ A+EIF M+ +P+ TY + I+ Y
Sbjct: 386 AKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYY 445
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GK+ S AL+ F +M++ PNI A + + A+ G EA++IF L+ G+ PD
Sbjct: 446 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 505
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
YN +M EA +L+S M CEPD N +++ +A
Sbjct: 506 VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKA 553
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD +++ L ++ + P +C LI+ + +A+ + + D C P
Sbjct: 874 DDALDLYYDLMSDRDFSPT---ACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAI 930
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +L+ + +G + A A+F+ M K G+ P Y+ +D L G + + F+ +K
Sbjct: 931 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELK 990
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR-SHKCKPNICTYTALVNAFAREGLC 275
P Y L+IN GK + AL LFNEM+ S P++ TY +L+ G+
Sbjct: 991 ESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMV 1050
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
EEA +I+ ++Q AG+EP+V+ +NAL+ Y L
Sbjct: 1051 EEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1081
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 13/206 (6%)
Query: 136 KKAEFTYL-ELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
K E Y+ +L+ R I + +TY + K + G L +A R+MR++G +A YN
Sbjct: 135 KIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYN 194
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I LLK +A+E+++RM D +PS +TY+ ++ GK + L EM +
Sbjct: 195 GLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETL 254
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------- 304
KPN+ T+T + R G EA EI +++ G PDV Y L++A
Sbjct: 255 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 314
Query: 305 -RLISRMHMG-CEPDRASYNIMVDAY 328
+ ++M G +PDR +Y ++D +
Sbjct: 315 KEVFAKMKTGRHKPDRVTYITLLDRF 340
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
I+ I+ YG+ A T+ ++ P L + +G +A+ +F ++
Sbjct: 439 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 498
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +V YN + K G +A+++ M +CC+P +IN KA +
Sbjct: 499 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDE 558
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A K+F M+ K KP + TY L+ + G +EA E+FE + G P+ +N L +
Sbjct: 559 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 618
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG-LHEGKCSY 340
L M MGC PD +YN ++ + G + E C +
Sbjct: 619 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 668
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL+ + ++E A+ VF +++ G P YN +D K G + EI
Sbjct: 785 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFA 270
++ M C+P+T T+ ++I+ KA AL L+ ++ S + P CTY L++ +
Sbjct: 845 YKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 904
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRA 319
+ G EA+++FE + G P+ YN L+ + L RM G PD
Sbjct: 905 KSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 964
Query: 320 SYNIMVDA---YGRA--GLH 334
+Y+++VD GR GLH
Sbjct: 965 TYSVLVDCLCMVGRVDEGLH 984
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY + + Y SG A F +M+ G+ P+ V N+ + L K G ++A +I
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K P + TY +M+ Y K + A+KL +EM + C+P++ +L+N +
Sbjct: 493 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYK 552
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+EA ++F +++ ++P V YN L+ EA L M GC P+ +
Sbjct: 553 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 612
Query: 321 YNIMVD 326
+N + D
Sbjct: 613 FNTLFD 618
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 13/180 (7%)
Query: 173 AEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
A +F + K G+ P YN I GLL+ + A ++F ++K C P TY ++
Sbjct: 770 ARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLL 829
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-GI 290
+ YGK+ K +++ EM +H+C+PN T+ +++ + G ++A +++ L
Sbjct: 830 DAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 889
Query: 291 EPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCS 339
P Y L++ R++ GC P+ A YNI+++ +G+AG + C+
Sbjct: 890 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACA 949
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +G+ A + ++ P TY++L+ CM G +++ FRE+++
Sbjct: 933 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKES 992
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFM 242
GL P V YN I+GL K ++A+ +F MK+ P TY +I G A
Sbjct: 993 GLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEE 1052
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A K++NE++ +PN+ T+ AL+ ++ G E A +++ + G P+ Y L
Sbjct: 1053 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++++ C P L+ + +++A +F M++ L P+ V YN+ + GL K G
Sbjct: 530 EMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 589
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q+A+E+F+ M + C P+T T+ + + K + +ALK+ +M C P++ TY
Sbjct: 590 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 649
Query: 264 ALVNAFAREGLCEEAEEIFEQLQG---------AGIEPDVYAYNALMEAYRLISRMHMGC 314
++ + G +EA F Q++ + P V + +AY++I+ C
Sbjct: 650 TIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSC 709
Query: 315 EPDRASY---NIMVDAYGRAGL 333
A+ ++M AG+
Sbjct: 710 ADQPANLFWEDLMGSILAEAGI 731
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ + ++ +G + +A + + M G P V Y ID L A E+
Sbjct: 258 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 317
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +MK +P TY +++ + + ++EM P++ T+T LV+A +
Sbjct: 318 FAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCK 377
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G EA + ++ GI P+++ YN L+ +A + M +G +P +
Sbjct: 378 AGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYT 437
Query: 321 YNIMVDAYGRAG 332
Y + +D YG++G
Sbjct: 438 YIVFIDYYGKSG 449
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++ + + + PT TY LL +G +++A +F M + G PP+ + +N+ D L K
Sbjct: 563 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 622
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+++ +M C P TY +I K + A+ F++M+ P+ T
Sbjct: 623 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVT 681
Query: 262 YTALVNAFAREGLCEEAEEIF 282
L+ + GL E+A +I
Sbjct: 682 LCTLLPGVVKAGLIEDAYKII 702
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 48/256 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G+ ++A + ++ C P T+ L C + + A + +M G
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 640
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR----DCCQPST------------ETYT 228
P YN+ I GL+K G ++A+ F +MK+ D T + Y
Sbjct: 641 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYK 700
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI------- 281
++ N + L + M S + I + G+C + + I
Sbjct: 701 IIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 760
Query: 282 -------------FEQL-QGAGIEPDVYAYN----ALMEAYRL-------ISRMHMGCEP 316
FE+ + G++P + YN L+EA + + + GC P
Sbjct: 761 SFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIP 820
Query: 317 DRASYNIMVDAYGRAG 332
D A+YN ++DAYG++G
Sbjct: 821 DVATYNFLLDAYGKSG 836
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L+I G+ ++A + E+ SR I P TY L+ ++G++E+A ++ E+++
Sbjct: 1003 LIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ +N+ I G G P+ A ++Q M P+T TY + N
Sbjct: 1063 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLL 200
+ EL +S P Y L++ LE+A +F EM+K G+ P YNS I L
Sbjct: 986 FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G ++A +I+ ++R +P+ T+ +I Y + K A ++ M + PN
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1105
Query: 261 TYTALVN 267
TY L N
Sbjct: 1106 TYEQLPN 1112
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 127/250 (50%), Gaps = 25/250 (10%)
Query: 103 SVQLRLNKKWDPIVLMSCVSILL----IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYA 158
S+Q + +K P L +C+++LL ++ + LH K + T P +
Sbjct: 186 SIQPIVREKPSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTR--------KPNVCVFN 237
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVEIFQRM-K 216
+L+K +C +G L+ A + EMR P+ V Y++ +DGL + G ++A ++F+ M
Sbjct: 238 ILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVS 297
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
RD P TY ++IN + + K A + M+S+ C PN+ Y+ALV+ + G E
Sbjct: 298 RDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLE 357
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
+A+ + +++G+G++PD Y +L+ EA L+ M GC+ D ++N+++
Sbjct: 358 DAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLL 417
Query: 326 DAYGRAGLHE 335
R G E
Sbjct: 418 GGLCREGKFE 427
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 21/204 (10%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNS 194
+ +EF+Y P TY+ L+ C +G +++A +F EM + + P + YN
Sbjct: 260 RNSEFSY---------PNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNV 310
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I+G +GG P +A + Q MK + C P+ Y+ +++ K K A + E++
Sbjct: 311 LINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSG 370
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
KP+ TYT+L+N R G +EA E+ E+++ G + D +N L+ EA
Sbjct: 371 LKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEAL 430
Query: 305 RLISRM-HMGCEPDRASYNIMVDA 327
++ ++ G ++ SY I++++
Sbjct: 431 DMVEKLPQQGVYLNKGSYRIVLNS 454
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 15/227 (6%)
Query: 137 KAEFTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
K F E + SR +P TY +L+ +C G ++A V + M+ G P+ Y++
Sbjct: 286 KEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSA 345
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+DGL K G + A + +K +P TYT +IN + KS A++L EM+ +
Sbjct: 346 LVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENG 405
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY----NALME------AY 304
C+ + T+ L+ REG EEA ++ E+L G+ + +Y N+L + A
Sbjct: 406 CQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAK 465
Query: 305 RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCS--YSLVELSVK 348
L+ M G +P A+ N ++ +AG+ + + LVE+ +
Sbjct: 466 ELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQ 512
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKA-EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
C E + L+K + S L EK A F PS ++ ++ LL A
Sbjct: 157 CKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLA 216
Query: 209 VEIFQRMKRDCC-QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK-PNICTYTALV 266
++ KRD +P+ + +++ + K A ++ EMR+ + PN+ TY+ L+
Sbjct: 217 RKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLM 276
Query: 267 NAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAY----------RLISRMHM-GC 314
+ R G +EA ++FE++ I PD YN L+ + +I M GC
Sbjct: 277 DGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGC 336
Query: 315 EPDRASYNIMVDAYGRAG 332
P+ +Y+ +VD + G
Sbjct: 337 YPNVYNYSALVDGLCKVG 354
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 69/150 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G ++A + EM++ G +V +N + GL + G ++A+++
Sbjct: 373 PDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDM 432
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++ + + +Y +++N + + A +L M +P+ T L+ +
Sbjct: 433 VEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCK 492
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G+ ++A L G +P + + L+
Sbjct: 493 AGMVDDAAVALFDLVEMGFQPGLETWEVLI 522
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++AE + S C P Y+ ++ A+C SG L +A+ +EMRK
Sbjct: 325 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 384
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMA 243
P V YN+ IDGL K G +A I ++M+ P TY+ +IN K+ A
Sbjct: 385 KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 444
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
KL + M C P++ TYT +++ + G EEAE + + ++ AG P+V Y L+
Sbjct: 445 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 504
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA R++ M + GC P+ +YN MV+ +G
Sbjct: 505 LCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 544
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ C S +A+ V EM+ G+ P A Y++ I GL K ++A ++
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+RM C P Y+ +I+ + K+ K A K EMR + P++ TY +++ +
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401
Query: 272 EGLCEEAEEIFEQLQGAG-IEPDVYAYNA----------LMEAYRLISRM-HMGCEPDRA 319
G EA+ I EQ+Q +G + PDV Y+ L+EA +L+ RM GC PD
Sbjct: 402 LGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 461
Query: 320 SYNIMVDAYGRAGLHE 335
+Y ++D + G E
Sbjct: 462 TYTTIIDGLCKCGRLE 477
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ + +A+ T E+ R P TY ++ C G + +A+ + +M++ G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 185 -LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P V Y++ I+GL K +A ++ RM + C P TYT +I+ K + A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L M+ C PN+ TYT L++ + +EAE + E+++ AG P++ YN ++
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 302 --------EAYRLISRMHMG---CEPDRASYNIMVDA 327
EA +L+ RM G C PD A+Y +V+A
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ A+ + LE+A + EMR+ G PP+ V YN +D L K A
Sbjct: 175 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 234
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M P+ T+ +++ + K A KL M + +PN+ TY+AL++
Sbjct: 235 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
+ EA+E+ E+++ G+ PD + Y+AL+ EA +++ RM GC PD
Sbjct: 295 CKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 354
Query: 319 ASYNIMVDAYGRAG 332
Y+ ++ A+ ++G
Sbjct: 355 VVYSSIIHAFCKSG 368
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 84 DAFDSLP--PTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
DAF P A DL LR + DP V+ LI A+ + ++A
Sbjct: 146 DAFTHTPIITAMANAGDLDGAMDHLR-SMGCDPNVV---TYTALIAAFARAKKLEEAMKL 201
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
E+ + C P TY +L+ A C ++ A+ V ++M + G P+ + +NS +DG K
Sbjct: 202 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 261
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN A ++ M +P+ TY+ +I+ K+ K A ++ EM++ P+ T
Sbjct: 262 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFT 321
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRMH 311
Y+AL++ + EEAE++ ++ G+G PDV Y++ L+EA + + M
Sbjct: 322 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381
Query: 312 -MGCEPDRASYNIMVDAYGRAG 332
PD +YN ++D + G
Sbjct: 382 KQRKSPDVVTYNTVIDGLCKLG 403
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C S +L+EA QK L + + + C P TY ++ C G LE+AE + +
Sbjct: 436 CKSDMLVEA--QKLLDR--------MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P+ V Y + I GL K +A + + M+ C P+ TY M+N + +
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545
Query: 240 SFMALKLFNEMRSHK--CKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
A +L M+ + C P+ TY +VNA L +EAE++ EQ++
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G +A +NS + L++ ++A ++F+ C+P +Y ++I+ + A A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+L EM+S P+ T+T ++ A A G + + + L+ G +P+V Y AL+
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVTYTALIAA 188
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA +L+ M GC P+ +YN++VDA
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE+ + + C P TY L+ C + +++AE V EMR G PP+ V YN+
Sbjct: 477 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 536
Query: 196 IDGLLKGGNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
++GL G ++A ++ QRMK R C P TY ++N + A +L +M+S
Sbjct: 537 VNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P+ TY+ L+ +CM L++A+ +F M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y++ I G K + +E+F+ M + +T TYT +I +A MA
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
++F EM S PNI TY L++ + G E+A +FE LQ + +EP +Y YN ++E
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +PD +YN M+ + R G E
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ + P T++ L+ A+ G L +AE ++ EM K + PS V Y+S I+G
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F+ M C P +Y+ +I + KA + ++LF EM N TYT
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRM 310
L+ + G C+ A+EIF+++ G+ P++ YN L++ + + R
Sbjct: 436 TLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
M EP +YNIM++ +AG
Sbjct: 496 KM--EPTIYTYNIMIEGMCKAG 515
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 84/148 (56%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ +G + A+ +F+EM G+PP+ + YN+ +DGL K G +KA+ +F+ +
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P+ TY +MI KA K LF + KP++ Y +++ F R+G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EEA+ +F++++ G P+ YN L+ A
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC S + +A A+ +M G P+ V +N+ I GL +AV +
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVAL 208
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM CQP TY +++N K + +A L N+M K +P + YT +++ +
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCK 268
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F++++ GI P+V Y++L+ +A RL+S M PD +
Sbjct: 269 NKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 329 FSALIDAFVKEG 340
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 134 LHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
LH KA + L+D C P TY +++ C G + A + +M + L P
Sbjct: 198 LHNKAS-EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGV 256
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKL 246
++Y + IDGL K + A+ +F+ M+ +P+ TY+ +I+ YG+ S A +L
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD---ASRL 313
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
++M K P++ T++AL++AF +EG EAE++++++ I+P + Y++L+ + +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 307 ISRMHMG-----------CEPDRASYNIMVDAYGRA 331
R+ C PD SY+ ++ + +A
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKA 409
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ C + ++ A +F+EM G+ P+ V Y+S I L G A +
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P T++ +I+ + K K A KL++EM P+I TY++L+N F
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
+EA+++FE + PDV +Y+ L++ + R+ G E
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Q A+ + E++ P TY LL C +G LEKA VF +++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN I+G+ K G + ++F + +P Y MI+ + + A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF EM+ PN Y L+ A R+G E + E+ ++++ G D
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A A+F EM K PS + ++ + + K + + ++M+ + TY++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL + +M +PNI T ++L+N + EA + +Q+ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+P+ +N L+ EA LI RM GC+PD +Y ++V+ + G
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR P+ ++ LL A + ++ +M+ G+P + Y+ I+ +
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRS 130
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P+ T + ++N Y + + A+ L ++M +PN T+
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +++ G +PD+ Y ++ A+ L+++M G
Sbjct: 191 TLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQG 250
Query: 314 -CEPDRASYNIMVDA 327
EP Y ++D
Sbjct: 251 KLEPGVLIYTTIIDG 265
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 33/180 (18%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
D +PP T++ L++ L N K + +++ Y Q+S + +TY ++
Sbjct: 460 DGVPPNIMTYNTLLD---GLCKNGKLE--------KAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 147 DSRCI--------------------PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
+ C P Y ++ +C G E+A+A+F+EM++ G
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
P++ YN+ I L+ G+ + + E+ + M+ T L+ N+ G+ KSF+ +
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 628
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AEF E+ + P E TY+LL+ Y +G E A V +EM
Sbjct: 317 LLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASN 376
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ V++ + G QK+ ++ + MK QP Y +MI+ +GK + A+
Sbjct: 377 VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAM 436
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
F M S P+I T+ L++ + G + AEE+F ++Q G P + YN ++
Sbjct: 437 ATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSM 496
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ +S+M G +P+ +Y +VD YG++G
Sbjct: 497 GEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSG 535
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ +G+ + A T+ +L P T+ L+ +C SG + AE +F EM++
Sbjct: 421 VMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQR 480
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN I+ + + ++ +M+ QP++ TYT ++++YGK+ + A
Sbjct: 481 GYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDA 540
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
++ ++S KP Y AL+NA+A+ GL E A F + G+ P + A N+L+
Sbjct: 541 IECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINA 600
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
EA+ ++ M EPD +Y ++ A R
Sbjct: 601 FGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIR 638
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +++ + L+ A A F M G+PP V +N+ ID K G A E+
Sbjct: 414 PDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEEL 473
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M++ P TY +MIN G+ + ++M+S +PN TYT LV+ + +
Sbjct: 474 FSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGK 533
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM---------GCEPDRAS 320
G +A E E L+ G +P YNAL+ AY R +S + + G P +
Sbjct: 534 SGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLA 593
Query: 321 YNIMVDAYG 329
N +++A+G
Sbjct: 594 LNSLINAFG 602
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 104/198 (52%), Gaps = 17/198 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T ++ A SG +AEA+F E+R+ GL P YN+ + G ++ G+ + A +
Sbjct: 274 PKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFV 333
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M++ +P +TY+L+I++Y A + A + EM + +PN ++ ++ +
Sbjct: 334 VSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRD 393
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPD 317
+G +++ ++ + ++ +G++PD + YN +++ + R++S G PD
Sbjct: 394 KGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSE---GIPPD 450
Query: 318 RASYNIMVDAYGRAGLHE 335
++N ++D + ++G H+
Sbjct: 451 IVTWNTLIDCHCKSGRHD 468
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ +I A G +AE + E+ ++ P Y LLK Y +G L+ AE V EM K
Sbjct: 280 VAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEK 339
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASK 239
G+ P Y+ ID G + A + + M+ QP++ ++ ++ Y G+ K
Sbjct: 340 AGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQK 399
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
SF LK +M+S +P+ Y +++ F + + A FE++ GI PD+ +N
Sbjct: 400 SFQVLK---DMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNT 456
Query: 300 LME----------AYRLISRMHM-GCEPDRASYNIMVDAYG 329
L++ A L S M G P +YNIM+++ G
Sbjct: 457 LIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMG 497
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL R + T TY L+ A +G +EKA + +MR+ G P V Y+S I L +
Sbjct: 160 LLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNK 219
Query: 205 PQKAV--EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+ +++ ++ D + +I + KA A++ +S+ P T
Sbjct: 220 IDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTL 279
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH- 311
A++ A G EAE +FE+++ G+EP AYNAL++ Y ++S M
Sbjct: 280 VAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEK 339
Query: 312 MGCEPDRASYNIMVDAYGRAGLHEG 336
G +PD +Y++++D Y AG E
Sbjct: 340 AGVKPDEQTYSLLIDVYAHAGRWES 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 87 DSLPPTHATWDDLINV-------SVQLRLNKKWDPIVLMSCVSI--LLIEAYGQKSLHKK 137
+ +PP TW+ LI+ + L + C++ ++I + G++ ++
Sbjct: 445 EGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQ 504
Query: 138 AEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+L + S+ + P TY L+ Y SG A ++ G P++ +YN+ I
Sbjct: 505 VT-AFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALI 563
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ + G + AV F+ M + PS +IN +G+ + A + M+ + +
Sbjct: 564 NAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIE 623
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
P++ TYT L+ A R ++ ++E++ +G PD A L A R + +
Sbjct: 624 PDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARAMLRSALRYMKQ 676
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + I L G +A +F+ ++ + +P T Y ++ Y + A
Sbjct: 271 GLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDA 330
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EM KP+ TY+ L++ +A G E A + ++++ + ++P+ Y ++ ++
Sbjct: 331 EFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILAN 390
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGR 330
YR L G +PDR YN+M+D +G+
Sbjct: 391 YRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGK 428
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ TY +++ A C G+LE+A + ++M + G P V YN+ +DGL K G ++A+
Sbjct: 76 CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL 135
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M+R C P+ ++ +I + SK A ++F+EM + P+ +Y L++
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
A+ G EA ++F ++ +GI P YN ++ EA L M GC P R
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 319 ASYNIMVDAYGRAG 332
++NI++DA+ + G
Sbjct: 256 FTFNILIDAHCKRG 269
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + A + +LL S P+ Y L+ CM+ + A +F +M +
Sbjct: 15 ILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 74
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PPS V YN ID K G ++A ++ ++M D P TY +++ K+ + A
Sbjct: 75 GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA 134
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L LFNEM C PN ++ ++ ++ ++A ++F +++ I PD ++Y L+
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMV 325
EAY+L RM G P +YN+++
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + +A + +LDS P+ TY +++ C++ L++A +F+ MR
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS +N ID K G +A + +RM D P TY+ +I+ ++ A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M +CKP + T L++ + G +EA E+ + + +G PDV YN L+
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
+ L+S M G P+ +Y +V +A
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 146 LDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+++R IP + +Y +L+ +G L +A +FR M G+ PSAV YN I G+
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A+E+F+ M+ C+PS T+ ++I+ + K K A +L M P++ TY+
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ ++A + E + +P V N L+ EA ++ M G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 314 CEPDRASYNIMVDAYGRAGLHE 335
PD +YN +V + RAG E
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTE 377
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ +C PT T L+ C +G +++A V M G P V YN+ + G + G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A E+ M P+ TYT +++ KA++ A +F +M+S C PN+ TYT
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL+ F G + ++F ++ AGI PD Y L
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+A ++ + ++A ++++ +P TY ++ C SG +E+A +F EM +
Sbjct: 85 VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ +N+ I GL + +A ++F M+ P + +Y ++I+ KA K A
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
KLF M P+ TY +++ +EA E+F+ ++ G P + +N L+
Sbjct: 205 YKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMV 325
EA+RL+ RM G PD +Y+ ++
Sbjct: 265 HCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A+ ++ +A + D +P TY+ L+ C ++ A + +M K
Sbjct: 260 ILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V N+ I GL K G ++A E+ M P TY +++ + +A ++ A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L ++M + PN+ TYTALV+ + EA +F Q++ +G P+++ Y AL+
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ +L M G PD Y + ++G
Sbjct: 440 FCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ +G L A +F+++ G+ PS V Y S I GL + A E+
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M R C PS TY ++I+ K A L +M P++ TY +++ +
Sbjct: 68 FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
G EEA +F +++ G P+ ++N ++ S++ C+ PD S
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187
Query: 321 YNIMVDAYGRAG 332
Y I++D +AG
Sbjct: 188 YGILIDGLAKAG 199
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ T+ +L+ A+C G +++A + + M G P V Y++ I GL A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M + C+P+ T +I+ KA + A ++ + M S P++ TY LV+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
R G E A E+ + G+ P+V Y AL+ EA + ++M GC P+
Sbjct: 371 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 430
Query: 319 ASYNIMVDAYGRAGLHEG 336
+Y ++ + AG +G
Sbjct: 431 FTYTALILGFCSAGQVDG 448
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + + P + Y IDGL K G A ++FQ++ PST YT +I+ A+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +LF +M C P+ TY +++A + G+ EEA ++ +++ G PDV YN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 300 LM----------EAYRLISRMH-MGCEPDRASYNIMV 325
+M EA L + M +GC P+R S+N ++
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTII 157
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + K+A ++ S P TY L+ +C +G E+A + +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + + GL K +A +F +MK C P+ TYT +I + A + L
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF----EQLQGAGIEPDVY--AYN 298
KLF EM P+ Y L + G A EI E L+ +VY A +
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510
Query: 299 ALMEAYRL 306
L++A ++
Sbjct: 511 GLLDAGKM 518
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M P+ +Y L++ A+ G +A ++F++L +G+ P AY +L+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 302 --EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+A L + M+ GC P +YN+++DA + G+ E C + H P
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVP 113
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y +S +A+ + ++ C P+ +Y +L+K +C SG +++A+ + EM
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ + G + G PQ A ++ + M+ P TY+++++ K A
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L M+ K +PNI YT L+ G E A E+F L GI+PDV Y ++
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA L M + GC P+ +YN+++ + R G
Sbjct: 408 LKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 111/226 (49%), Gaps = 11/226 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ ++ + +A+ + +++ P +TY L+ YC +++A+ +F M +
Sbjct: 192 ILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK 251
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS YN I G K G +A + M P T TY+ ++ + + + A
Sbjct: 252 GCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 311
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
KL EMRS+ P++ TY+ +++ ++G +EA E+ + +Q + IEP+++ Y L++
Sbjct: 312 QKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQG 371
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKC 338
A L S + + G +PD +Y +M+ + GL C
Sbjct: 372 MCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ ++ C G A + ++M + G P+ VVY++ ID L K +A+E
Sbjct: 80 PDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEF 139
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P+ TY+ +++ + +S A LF +M P+ T+ LV+ ++
Sbjct: 140 LSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK 199
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
EG+ EA+ +FE + G+EP+V YNALM+ Y S+M GC P S
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259
Query: 321 YNIMVDAYGRAG 332
YNI++ + ++G
Sbjct: 260 YNILIKGHCKSG 271
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + +A+ E+ P TY+ L+K +C G + A+ + EMR Y
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY 321
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + Y+ +DGL K G+ +A E+ + M+ +P+ YT++I K A
Sbjct: 322 GLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA 381
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+ + +P++ TYT +++ + GL EA E+F + G P+ YN +++
Sbjct: 382 RELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGR 330
+ RLI M G D +++ ++ D R
Sbjct: 442 FLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 152 PTEDTYALLLKAYCMSGL--LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P T +L+ +C S A +V M K GL P+ V +++ ++GL AV
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F M + +P TY+ +IN K + MA++L +M CKPN+ Y+ ++++
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
++ L EA E ++ GI P+V Y++++ EA L +M PD
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187
Query: 319 ASYNIMVDAYGRAGL-HEGKCSY-SLVELSVK 348
++NI+VD + G+ E +C + +++E V+
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVE 219
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY+ +L +C G +A ++F++M + + P V +N +DGL K G
Sbjct: 142 EMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEG 201
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A +F+ M +P+ TY +++ Y S+ A KLFN M C P++ +Y
Sbjct: 202 MILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYN 261
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-M 312
L+ + G +EA+ + ++ + PD Y+ LM +A +L+ M
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY 321
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y+I++D + G
Sbjct: 322 GLLPDLMTYSIVLDGLCKQG 341
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLIN-VSVQLRL---NKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTY-L 143
L P H T+ L+N +S + ++ K +D +V M ++ + L K T +
Sbjct: 43 LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102
Query: 144 ELL----DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+LL + C P Y+ ++ + C L+ +A EM G+ P+ V Y+S + G
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G +A +F++M P T T+ ++++ K A +F M +PN+
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TY AL++ + + +EA+++F + G P V +YN L+ EA L++
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 310 M-HMGCEPDRASYNIMVDAYGRAG 332
M H PD +Y+ ++ + + G
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDG 306
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 132 KSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K H F L+ + +S+ P Y +L++ C G LE A +F + G+ P V
Sbjct: 339 KQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVV 398
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y I GLLKGG +A E+F+ M C P++ TY ++I + + + A +L EM
Sbjct: 399 TYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458
Query: 251 RSHKCKPNICTYTALVNAFARE 272
+ T+ L + +R+
Sbjct: 459 VGRGFSADSSTFQMLSDLESRD 480
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 119/236 (50%), Gaps = 15/236 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
++K + P V++ C LI+ + KKA +E+L++ P +Y ++ + +
Sbjct: 89 VSKGFKPDVVL-CTK--LIKGFFNSRNLKKA-MRVMEILETYGDPDVYSYNAMISGFSKA 144
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
++ A VF MR G P V YN I L G + A E+ + +D C+PS TY
Sbjct: 145 NQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITY 204
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T++I + AL+LF+E+ S +P++ TY A++ +EG+ + A + L
Sbjct: 205 TILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSA 264
Query: 288 AGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G PDV +YN L+ ++ RL+ M + GCEP+ +++I++ ++ R G
Sbjct: 265 RGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREG 320
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
ELL C P+ TY +L++A + G + +A +F E+ GL P YN+ I G+ K G
Sbjct: 191 ELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEG 250
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A++ + + C P +Y +++ + S+ +L +M C+PN+ T++
Sbjct: 251 MEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHS 310
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+++F REG EA + E ++ G+ PD Y+Y+ L+ A+ R+ +
Sbjct: 311 ILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSD 370
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD +YN ++ + G
Sbjct: 371 GCLPDIVNYNTILATLCKFG 390
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 28/262 (10%)
Query: 98 DLINVSVQLR--LNK-KWDP-------IVLMSC-----VSILLIEAYGQKSLHKKAEFTY 142
D+++ ++ LR LNK +W+ +VL C +LI ++ ++ ++A
Sbjct: 270 DVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREA-VNV 328
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ + + P +Y L+ A+C G L+ A +M G P V YN+ + L K
Sbjct: 329 LEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G A+++F+++ C P+ Y M + AL++ +EM P+ T
Sbjct: 389 FGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEIT 448
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----EAYR-------LISRM 310
Y +L++ R+GL +EA + ++ +P V ++N ++ +A+R LI+ +
Sbjct: 449 YNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMV 508
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
GC P+ SY ++++ AG
Sbjct: 509 EKGCLPNETSYVLLIEGIAYAG 530
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +LL+++ E E + ++M G P+ V ++ I + G ++AV
Sbjct: 267 CNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAV 326
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + MK P + +Y +I+ + K + +A++ +M S C P+I Y ++
Sbjct: 327 NVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATL 386
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDR 318
+ G + A ++FE+L G P V AYN + ++A +IS M G +PD
Sbjct: 387 CKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDE 446
Query: 319 ASYNIMVDAYGRAGL 333
+YN ++ R GL
Sbjct: 447 ITYNSLISCLCRDGL 461
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT Y + A G KA + EM + G+ P + YNS I L + G +A+
Sbjct: 407 CPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAI 466
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M+ QP+ ++ +++ KA + F ++L M C PN +Y L+
Sbjct: 467 GLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526
Query: 270 AREGLCEEAEEIFEQLQGAGI 290
A G EA E+ L G+
Sbjct: 527 AYAGWRAEAMELANSLYRLGV 547
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A Q+ L K+A + + D + P +Y L+ A+C + L +A V+ +M + G
Sbjct: 313 LLVALAQEGLGKEAARVFDRMRD-QYTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKG 371
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VV+N+ IDGLL+G +AV++F+ MK P+ TYT++I + K K MA+
Sbjct: 372 MKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAM 431
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F EM+ C+P + TYT L+ + + + E++ G PD YNAL+
Sbjct: 432 RCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLL 491
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A R+ +M G EP +YN+M+ +Y G
Sbjct: 492 TNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGG 530
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF MR +G +N + L + G ++A +F R
Sbjct: 273 DAFKIAIKSFAAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDR 332
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M RD P +YT ++ + A A +++N+M KP++ + +++ R
Sbjct: 333 M-RDQYTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQR 391
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ A R M + GC+P+ A+Y
Sbjct: 392 RPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTC 451
Query: 324 MVDAYGRA 331
++ YG A
Sbjct: 452 LLVGYGNA 459
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A + E+ + C P TY LL Y + +++ A+ EM +
Sbjct: 416 MLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQK 475
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-M 242
G PP YN+ I L P AV I+++M +P+ TY +M+ Y +++ M
Sbjct: 476 GCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAM 535
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ EM P++ +YT +N R G EA + E++ G++ YN
Sbjct: 536 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYN 591
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI+ +++ A Y +++ PT TY +++K+Y + G AV+ EM +
Sbjct: 487 LIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRK 546
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P Y +I+G ++ G P +A + + M + + Y + KA K +
Sbjct: 547 GICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDIL 606
Query: 244 LKLFNEMR 251
+L +++
Sbjct: 607 YELAQKVK 614
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L+ CM+ ++ + EM G P YN+ IDGL K G +A
Sbjct: 64 LPNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEANR 123
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F MK C P TY+ +I + K + MA LF++M P++ T+ LV +
Sbjct: 124 LFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYC 183
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRMHMG-----CE 315
GL ++AE + E++ + PDVY Y +L +EA+R++ RM G C+
Sbjct: 184 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRMAKGGSNKNCK 243
Query: 316 PDRASYNIMVDAYGRAG 332
D +Y +M+D R G
Sbjct: 244 ADMFAYRMMMDGLCRTG 260
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C+P +TY L+ C +G + +A +F EM+ P + Y+ I G K
Sbjct: 92 EMTATGCLPDINTYNTLIDGLCKTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLD 151
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +F M + P T+ ++ Y A A +L EM + C P++ TYT
Sbjct: 152 RINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 211
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG----IEPDVYAYNALMEAYRLISRMHMGCE 315
+LV+ F + EA + +++ G + D++AY +M+ RM E
Sbjct: 212 SLVDDFCKVKRMVEAHRVLKRMAKGGSNKNCKADMFAYRMMMDGLCRTGRMSAALE 267
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E Y L AE E++ S C P TY L+ +C + +A V + M K G
Sbjct: 178 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRMAKGG 237
Query: 185 ----LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
Y +DGL + G A+E+ + +K+ P + Y +I + +
Sbjct: 238 SNKNCKADMFAYRMMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 297
Query: 241 FMALKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEA 278
A+++ EM S K +PN Y A++ AREG E+A
Sbjct: 298 RKAMEVLEEMTLSRKGRPNAKAYKAVIQELAREGRHEKA 336
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Query: 132 KSLHKKAEFTYLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+ H + L+ +L C+PTE TY +L+ + C +G LE+AE +FR M G P++V
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y S I G K G ++A +F M +P T+T+MI+ K+ A K F EM
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
CKPN+ TYT ++ ++ G A I + + G PD Y L++ + + R+
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMR 181
++L++ + + +KA + E++ +P + + +++ + +++A VF +M
Sbjct: 193 LILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQME 252
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K G PP A+ YN+ IDGL K G+ Q+A+++ M C P+ TY +++N KA
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +LF M + +PN YT+L++ FA+ G +EA +F+++ AG PDV + ++
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372
Query: 302 E-----------AYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ A M GC+P+ +Y ++ + G
Sbjct: 373 DGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ EM K G+ P+ +N I + AV F+ MKR C+P T+ ++++
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199
Query: 235 GKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
KA A ++F+EM + P+ +TA+V + +EA E+F Q++ G PD
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
AYN ++ EA +++ M C P +Y I+V++ +AG E
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L C G +++A + E G V Y + GL G +AV
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+FQ M R P Y +IN K K A K F+EM KP + TYTALV A
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694
Query: 271 REGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAY 304
G +EA FE + G + V Y+AL+ +
Sbjct: 695 HAGNVDEAFHRFESMLARGELVGSVMIYDALIHGF 729
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 47/239 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L + P ++ +L++++ + + A F M++ P + +D L K G
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAG 203
Query: 204 NPQKAVEIFQRM----------------------------------KRDCC--QPSTETY 227
+KA E+F M + + C P Y
Sbjct: 204 MDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAY 263
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
MI+ KA + ALK+ + M + C P TY LVN+ + G E AEE+F +
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323
Query: 288 AGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMVDAYGRAGLHE 335
+G P+ Y +L+ + RM C PD ++ +M+D ++G E
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ G YN ++ L+ N + I + M + P+T ++ ++I + + ++
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNAL 300
A+ F M+ +CKP++ T+ LV+ + G+ E+A E+F ++ G + PD + A+
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 301 M----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ EA + +M G PD +YN M+D +AG
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E++ P Y ++ LE A F EM G P+ Y + +
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 197 DGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
L GN +A F+ M R S Y +I+ + KA K ALKLF +M S
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
P T +L + R G E+A+E+ +++ G P + A+++ R
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 94/267 (35%), Gaps = 84/267 (31%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK-- 207
C P TY LL +C G L++A + E+ K P+ +Y+S ++GL GG+ +K
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490
Query: 208 ----------------------------------AVEIFQRMKRDCCQPSTETYTLMINL 233
A IFQRM + C+P TY ++IN
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 234 Y-----GKASKSFM--------------------------------ALKLFNEMRSHKCK 256
+ ++F A+K+ E S
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-- 314
++ YTAL +G + A +F+++ G PD AY ++ + ++ C
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670
Query: 315 ---------EPDRASYNIMVDAYGRAG 332
+P A+Y +V A AG
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAG 697
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ +C + ++ A +F +M G P+AV S DGL++ G +KA E+ Q M
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
P T+T +++ K+ +S LKL E
Sbjct: 782 AGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 132 KSLHKKAEFTYLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+L A E + SR +PT T A L SG EKA+ + +EM G PP A
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQ 213
+ + +DGL K K +++ Q
Sbjct: 791 TFTAILDGLRKSDESGKLLKLVQ 813
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
SILL +KS +AE + +++ S C P TY+++L +C + ++ A V EM
Sbjct: 259 SILL--GLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS 316
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K G P V YN +DGL K KA E+F M + C P +Y++++N K +K
Sbjct: 317 KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 376
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A LF+ M K P++ T+ L++ + G +EA+++ +Q+ +G PD AYN LM
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Query: 302 EAYR 305
R
Sbjct: 437 NGLR 440
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y +K +A Y E++ P+ TY LL A+C +++A +F+ M +
Sbjct: 48 ILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK 107
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P V Y++ I GL K G +A+E +F +M C +T Y +IN K
Sbjct: 108 GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIER 167
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A KL EM S P+ TY +++ R G EA++ F+ + G PDV AYN L+
Sbjct: 168 AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227
Query: 302 ---------EAYRLISR-MHMGCEPDRASYNIMVDAYGR 330
EA +L + G PD +YN ++ R
Sbjct: 228 ALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 266
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ ++LK++C G L +F +M G+ P + YN IDG K G +A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+++ M +PS TY ++N + K +K A++LF M +P++ TY+ +++
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 270 AREGLCEEA-EEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPD 317
+ G EA E +F ++ G + AYNAL+ AY+L+ M G PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 318 RASYNIMVDAYGRAG 332
+YN ++ R G
Sbjct: 184 NITYNTILSGLCRMG 198
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +L C G + +A+ F M G P V YN +D L K G +A++
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ + P T TY + L G A KS M A ++F +M + C PN TY+ +++
Sbjct: 241 LFKDVIAKGYMPDTVTYNSI--LLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPD 317
R ++A ++ E++ G PDV YN L++ A+ L S M GC PD
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358
Query: 318 RASYNIMVDA 327
SY+++++
Sbjct: 359 IVSYSVVLNG 368
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++LD+ P Y +L+ Y G +++A ++ EM GL PS YNS ++ K
Sbjct: 31 FEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCK 90
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK-LFNEMRSHKCKPNIC 260
++A+E+F+ M +P TY+ +I+ K K AL+ LF++M C N
Sbjct: 91 ETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTV 150
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
Y AL+N ++ E A ++ E++ G PD YN ++ EA + M
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSM 210
Query: 311 -HMGCEPDRASYNIMVDAYGRAG 332
G PD +YN ++DA + G
Sbjct: 211 PSRGYSPDVVAYNGLLDALYKEG 233
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG-LLEKAEAVFREMRKY 183
L+ A+ +++ K+A + + + P TY+ ++ C +G + E E +F +M +
Sbjct: 84 LLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER 143
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + V YN+ I+GL K N ++A ++ + M P TY +++ + K A
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ F+ M S P++ Y L++A +EG +EA ++F+ + G PD YN+++
Sbjct: 204 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 263
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA + +M GC P+ A+Y+I++ + RA
Sbjct: 264 LARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRA 302
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y LL A G ++A +F+++ G P V YNS + GL + N +A E+
Sbjct: 217 PDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 276
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M C P+ TY+++++ + +A K A K+ EM P++ TY L++ +
Sbjct: 277 FKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 336
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRM-HMGCEPDRAS 320
L ++A E+F + G PD+ +Y N + +A L RM PD +
Sbjct: 337 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 396
Query: 321 YNIMVDAYGRAG-LHEGK 337
+NI++D +AG L E K
Sbjct: 397 FNILMDGLCKAGKLDEAK 414
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
E + ++++ C Y L+ C +E+A + EM G P + YN+ + G
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L + G +A + F M P Y +++ K K+ A+KLF ++ + P+
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
TY +++ AR+ +EAEE+F+++ +G P+ Y+ ++ +A++++
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGL 333
M +G PD +YNI++D + L
Sbjct: 314 EMSKIGAVPDVVTYNILLDGLCKTNL 339
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +LL C + L++KA +F M G P V Y+ ++GL K A
Sbjct: 321 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 380
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F RM P T+ ++++ KA K A L ++M C P+ Y L+N
Sbjct: 381 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLR 440
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVY 295
++G +A+ + + ++ G D +
Sbjct: 441 KQGRHIQADRLTQAMKEKGFLSDCF 465
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ + +L KA + ++D+ C P +Y+++L C + + A +F M +
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P V +N +DGL K G +A ++ +M C P Y ++N K + A
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448
Query: 244 LKLFNEMR 251
+L M+
Sbjct: 449 DRLTQAMK 456
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------- 304
+C PN T+ ++ +F ++G + ++FEQ+ GI PD YN L++ Y
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 305 --RLISRM-HMGCEPDRASYNIMVDAY 328
RL M +G EP +YN +++A+
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAF 88
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R +P +Y+ ++ + +G ++A +F EMR G+ V YN+ + K G ++A
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++I + M + TY ++ YGK K K+F EM+ PN+ TY+ L++
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPD 317
+++ GL +EA EIF + + AG+ DV Y+AL++ A LI M G P+
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 318 RASYNIMVDAYGRAGLHEGKCSYS 341
+YN ++DA+GR+ + YS
Sbjct: 584 VVTYNSIIDAFGRSATMDRSADYS 607
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRM 215
++ L+ AY SGL E+A +VF M++YGL P+ V YN+ ID KGG K V + F M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R+ QP T+ ++ + + A LF+EM + + + ++ +Y L++A + G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A EI Q+ I P+V +Y+ ++ EA L M ++G DR SYN +
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 325 VDAYGRAGLHE 335
+ Y + G E
Sbjct: 451 LSIYTKVGRSE 461
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + K + + + + P T+ LL GL E A +F EM
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ YN+ +D + KGG A EI +M P+ +Y+ +I+ + KA + A
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LF EMR + +Y L++ + + G EEA +I ++ GI+ DV YNAL+
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
Y ++ + M P+ +Y+ ++D Y + GL++
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 14/224 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLE--KAEAVFREMRK 182
LI AYG+ LH++A + + + P TY ++ A C G +E + F EM++
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQR 332
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P + +NS + +GG + A +F M + +Y +++ K + +
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A ++ +M + PN+ +Y+ +++ FA+ G +EA +F +++ GI D +YN L+
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
Y + R +G + D +YN ++ YG+ G ++
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G + A+ +F G + +++ I + G ++A+ +F MK +P+ TY
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 228 TLMINLYGKASKSFMAL-KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+I+ GK F + K F+EM+ + +P+ T+ +L+ +R GL E A +F+++
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 287 GAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
IE DV++YN L++A +M + E P+ SY+ ++D + +AG
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG++ + + + + E+ +P TY+ L+ Y GL ++A +FRE + G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK----- 239
L V+Y++ ID L K G AV + M ++ P+ TY +I+ +G+++
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA 604
Query: 240 ----------SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE-------EIF 282
S AL E ++ T N + CEE E+F
Sbjct: 605 DYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKD-CEEGMQELSCILEVF 663
Query: 283 EQLQGAGIEPDVYAYNALMEA 303
++ I+P+V ++A++ A
Sbjct: 664 RKMHQLEIKPNVVTFSAILNA 684
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI+ G+ K +A ++F + + ++AL++A+ R GL EEA +F ++ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 290 IEPDVYAYNALMEA-------YRLISRM-----HMGCEPDRASYNIMVDAYGRAGLHEG 336
+ P++ YNA+++A ++ +++ G +PDR ++N ++ R GL E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMH 311
+A+++ R G A+ IFE G VYA++AL+ AY S
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 312 MGCEPDRASYNIMVDAYGRAGL 333
G P+ +YN ++DA G+ G+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGM 318
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Query: 132 KSLHKKAEFTYLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+ H + L+ +L C+PTE TY +L+ + C +G LE+AE +FR M G P++V
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y S I G K G ++A +F M +P T+T+MI+ K+ A K F EM
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
CKPN+ TYT ++ ++ G A I + + G PD Y L++ + + R+
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMR 181
++L++ + + +KA + E++ +P + + +++ + +++A VF +M
Sbjct: 193 LILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQME 252
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K G PP A+ YN+ IDGL K G+ Q+A+++ M C P+ TY +++N KA
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +LF M + +PN YT+L++ FA+ G +EA +F+++ AG PDV + ++
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372
Query: 302 E-----------AYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ A M GC+P+ +Y ++ + G
Sbjct: 373 DGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ EM K G+ P+ +N I + AV F+ MKR C+P T+ ++++
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199
Query: 235 GKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
KA A ++F+EM + P+ +TA+V + +EA E+F Q++ G PD
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
AYN ++ EA +++ M C P +Y I+V++ +AG E
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L C G +++A + E G V Y + GL G +AV
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+FQ M R P Y +IN K K A K F+EM KP + TYTALV A
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694
Query: 271 REGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAY 304
G +EA FE + G + V Y+AL+ +
Sbjct: 695 HAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGF 729
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 47/239 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L + P ++ +L++++ + + A F M++ P + +D L K G
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAG 203
Query: 204 NPQKAVEIFQRM----------------------------------KRDCC--QPSTETY 227
+KA E+F M + + C P Y
Sbjct: 204 MDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAY 263
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
MI+ KA + ALK+ + M + C P TY LVN+ + G E AEE+F +
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323
Query: 288 AGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMVDAYGRAGLHE 335
+G P+ Y +L+ + RM C PD ++ +M+D ++G E
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 36/185 (19%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L C G +++A ++F+EM + G P A Y I+GL+KG + A + F M
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMI 675
Query: 217 RDCCQPSTETYTLM------------------------------------INLYGKASKS 240
+P+ TYT + I+ + KA K
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKV 735
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
ALKLF +M S P T +L + R G E+A+E+ +++ G P + A+
Sbjct: 736 DAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795
Query: 301 MEAYR 305
++ R
Sbjct: 796 LDGLR 800
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ G YN ++ L+ N + I + M + P+T ++ ++I + + ++
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNAL 300
A+ F M+ +CKP++ T+ LV+ + G+ E+A E+F ++ G + PD + A+
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 301 M----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ EA + +M G PD +YN M+D +AG
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 95/267 (35%), Gaps = 84/267 (31%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ--- 206
C P TY LL +C G L++A + E+ K P+ +Y+S + GL GG+ +
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Query: 207 ---------------------------------KAVEIFQRMKRDCCQPSTETYTLMINL 233
+A IFQRM + C+P TY ++IN
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 234 Y-----GKASKSFM--------------------------------ALKLFNEMRSHKCK 256
+ ++F A+K+ E S
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY----NALMEAYRL------ 306
++ YTAL +G + A +F+++ G PD AY N L++ +L
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKF 670
Query: 307 -ISRMHMGCEPDRASYNIMVDAYGRAG 332
+ G +P A+Y +V A AG
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAG 697
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ +C + ++ A +F +M G P+AV S DGL++ G +KA E+ Q M
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
P T+T +++ K+ +S LKL E
Sbjct: 782 AGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 132 KSLHKKAEFTYLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+L A E + SR +PT T A L SG EKA+ + +EM G PP A
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQ 213
+ + +DGL K K +++ Q
Sbjct: 791 TFTAILDGLRKSDESGKLLKLVQ 813
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ D C P TY L+ C + ++A+ +F M+ PS V YN+ +DGL + G
Sbjct: 104 EMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG 163
Query: 204 NPQKAVEIFQRM-------KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
++A+ +FQ M D C P+ TY+++I+ KA++ A++L M++ C
Sbjct: 164 KLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS 223
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P++ TYT LV+ +E A E+ ++ AG P++ YN+L+ +A L
Sbjct: 224 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 283
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCS 339
+ M GC P+ +Y ++D + G + C+
Sbjct: 284 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 317
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TYA LL+ +C G +++A+ F EMR L P+ + + IDGL K A+
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M+ T YT +++ K + AL + +EMR H C+PN+ TY +L++
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISR----MH 311
+ + A+E+FE ++ P + YN L++ ++ R M
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 312 MGCEPDRASYNIMVDAYGRA 331
C P+ +Y++++D +A
Sbjct: 185 DRCSPNVITYSVLIDGLCKA 204
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 18/225 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM---R 181
LI+ + + +A+ + + C P+ TY LL +G LE+A A+F+EM R
Sbjct: 120 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 179
Query: 182 KYGL----PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
+ + P+ + Y+ IDGL K +AVE+ + MK C P TYT++++ K
Sbjct: 180 SHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 239
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
SK A ++ EM C PN+ TY +L++ R +A + + G P+V Y
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299
Query: 298 NALMEAYRLISRMHMGC-----------EPDRASYNIMVDAYGRA 331
L++ + R+ C PD YN++++ +A
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKA 344
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ ++S A E+LD+ C+P TY LL C + + A A+ R+M
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V Y + IDGL K G + A + M P Y ++IN KA + +
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 350
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L S KP++ TY++++ R +EA + ++ G PDV Y+ L+
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA+ L M GC+ D +Y+ ++D +AG
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
+D RC P TY++L+ C + + +A + M+ G P + Y +DGL K
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A E+ + M C P+ TY +++ +A + AL L +M C PN+ TY L
Sbjct: 243 AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 302
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGC 314
++ + G ++A + + G PD+ YN L+ E+ L+ R + G
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362
Query: 315 EPDRASYNIMVDAYGRAGLHEGKCSYSL 342
+PD +Y+ ++ R+ + C L
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLL 390
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + K A +++D P Y +L+ C + ++++ A+ R G
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y+S I GL + +A + +K C P Y+ +I+ KA K A
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L+ M C ++ TY+ L++ + G +EA + ++ G P YN+L+
Sbjct: 422 DLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
EA L+ M C P +YNI++ R
Sbjct: 482 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 518
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ ++ C S L++A + ++ G PP ++Y++ IDGL K G +A ++
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 423
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M D C TY+ +I+ KA + A L M P+ TY +L+
Sbjct: 424 YEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------------GCE 315
+EA E+ E+++ + P YN L+ + R+ G
Sbjct: 484 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTA 543
Query: 316 PDRASYNIMVDAYGRAG 332
D +Y+ ++D +AG
Sbjct: 544 LDTIAYSSLIDGLCKAG 560
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 40/156 (25%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ C +G +++A + M + G PPS + YNS I GL + +A+E+ + M
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497
Query: 216 KRDCCQPSTETYTLMIN--------------------------------------LYG-- 235
+R C PS TY ++I+ + G
Sbjct: 498 ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
KA + AL F EM + P+ TY+ L+ +
Sbjct: 558 KAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKK 593
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 144 ELLDSRCIPTEDTYALLLKAYC-------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
E+ S C P+ TY +L+ C LLE+A+A R + G + Y+S I
Sbjct: 496 EMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA--RCVAAGGTALDTIAYSSLI 553
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
DGL K G +A++ FQ M + P TY++++
Sbjct: 554 DGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+ V LI +G KS + E+ E+ + +P TY ++ C +G + +A +F
Sbjct: 357 NVVYTTLISGFG-KSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM GL P V Y + IDG K G ++A + +M P+ TYT +++ K
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ +A +L +EM +PN+CTY AL+N + G E+A ++ E++ AG PD Y
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535
Query: 298 NALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
+M+AY + M G +P ++N++++ + +G+ E
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + K+A + ++++ P TY L+ C G ++ A + EM + G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YN+ I+GL K GN ++AV++ + M P T TYT +++ Y K + A
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L M +P I T+ L+N F G+ E+ E + + + GI P+ +N+LM+ Y
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
+ + M G PD +YNI++ + +A
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY ++ C +G + +AE V R M+ + P VVY + I G K GN ++
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MKR P TYT MI+ +A K A KLF+EM S KP+ TYTAL++ + +
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G +EA + Q+ G+ P+V Y AL++ A L+ M G +P+ +
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499
Query: 321 YNIMVDAYGRAG 332
YN +++ + G
Sbjct: 500 YNALINGLCKVG 511
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y++++ YC L K + E+++ GL P+ YNS I L K G +A +
Sbjct: 284 VPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ 343
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + MK P YT +I+ +GK+ + KLF+EM+ K P+ TYT++++
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLC 403
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ G EA ++F ++ G++PD Y AL+ EA+ L ++M G P+
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVV 463
Query: 320 SYNIMVDAYGRAG 332
+Y +VD + G
Sbjct: 464 TYTALVDGLCKCG 476
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 133/306 (43%), Gaps = 26/306 (8%)
Query: 43 LRGKGWKYGSGFVDGIFPVLSPT-----AQQILRFV--QREVDSNTIWDAFDSLPPTHAT 95
L+ KG K + I L T A+Q+LR + QR N ++ S
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLIS------G 366
Query: 96 WDDLINVSVQLRL--NKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPT 153
+ NVSV+ +L K IV +I Q +A + E+L P
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD 426
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY L+ YC +G +++A ++ +M + GL P+ V Y + +DGL K G A E+
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH 486
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M QP+ TY +IN K A+KL EM P+ TYT +++A+ + G
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYN 322
+A E+ + G++P + +N LM + RLI M G P+ ++N
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606
Query: 323 IMVDAY 328
++ Y
Sbjct: 607 SLMKQY 612
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y ++L C G +++A ++ +M G P V Y+ +DG + K +++ + +
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P+ TY +I+ K + A ++ M++ + P+ YT L++ F + G
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
++F++++ I PD Y +++ EA +L S M G +PD +Y +
Sbjct: 374 SVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL 433
Query: 325 VDAYGRAGLHEGKCSYSL 342
+D Y +AG E K ++SL
Sbjct: 434 IDGYCKAG--EMKEAFSL 449
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++AY + KA +LD PT T+ +L+ +CMSG+LE E + + M G
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A +NS + N + +EI++ M P T TY ++I + KA A
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM +Y +L+ F + EEA ++FE+++ G + Y+ ++
Sbjct: 658 FLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+ A VFRE + G+ + V YN + L + G ++A + +M+ P +Y++
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+++ Y + + LKL E++ KPN TY ++++ + G EAE++ ++
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 290 IEPDVYAYNALMEA----------YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
I PD Y L+ Y+L M PD +Y M+ +AG
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ AYC G + KA + R M GL P+ V +N ++G G + +
Sbjct: 530 PDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL 589
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P+ T+ ++ Y + ++++ M + P+ TY L+ +
Sbjct: 590 IKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCK 649
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
+EA + +++ G +YN+L+ EA +L M G ++
Sbjct: 650 ARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEI 709
Query: 321 YNIMVDA 327
Y+I VD
Sbjct: 710 YDIFVDV 716
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 47/101 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + K+A F + E+++ T +Y L+K + E+A +F EMR +
Sbjct: 642 ILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTH 701
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
G +Y+ ++D + GN + +E+ C T
Sbjct: 702 GFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT 742
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +++L+K+A + E+ S P + T+ LL Y + ++A V +EM + G
Sbjct: 249 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVG 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PPS V YNS I +K G ++AV + Q M+ +P TYT +I+ +A K A+
Sbjct: 309 CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAI 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++EM + CKPN+CTY AL+ G E +F++ + AG PD+ +N L+
Sbjct: 369 VEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVF 428
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R +Y ++ +Y R GL +
Sbjct: 429 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 46/253 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ H +A E+ C P+ TY L+ +Y GLLE+A A+ +EM G
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y + I GL + G A+ + M R+ C+P+ TY +I ++G K +
Sbjct: 344 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403
Query: 245 KLFNEMRSHKCKPNICT-----------------------------------YTALVNAF 269
+F+E RS P+I T Y +L++++
Sbjct: 404 AVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 463
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+R GL + A +I++++ AGI PDV YNA++ +A +L + M C+PD
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 319 ASYNIMVDAYGRA 331
SY+ ++ AY A
Sbjct: 524 YSYSSLLHAYANA 536
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKY 183
L+ A+ + + A + ++DS P TY ++L Y M+ ++ + M+++
Sbjct: 178 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH 237
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I + ++A ++F MK +P T+ ++++YGKA + A
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ EM C P++ TY +L++++ ++GL E+A + ++++ G++PDV Y L+
Sbjct: 298 IEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISG 357
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
++ GC+P+ +YN ++ +G G
Sbjct: 358 LDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRG 397
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 54/269 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ L + + E+ + IP DTY L+ +Y GL + A +++ M + G
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS------ 238
+ P YN+ + L +GG ++A ++F M+ C+P +Y+ +++ Y A
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMK 543
Query: 239 ------------------KSFM-----------ALKLFNEMRSHKCKPNICTYTALVNAF 269
K+ + A K F E+R +C +I A+V+ +
Sbjct: 544 ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIY 603
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
+ + + E+I ++ + I YN+LM Y L G PDR
Sbjct: 604 GKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDR 663
Query: 319 ASYNIMVDAYGRAG--------LHEGKCS 339
SYN ++ AYGR G E KCS
Sbjct: 664 YSYNTVIYAYGRKGQMKEASRLFSEMKCS 692
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 90/169 (53%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E++ + C P TY L+K + + G + AVF E R G P V +N+ + +
Sbjct: 371 YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 430
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + +F+ MK+ P +TY +I+ Y + +A++++ M P++ T
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
Y A+++A AR G E+AE++F +++ +PD Y+Y++L+ AY R+
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRL 539
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ L ++A VF EM+ G P V +NS +D K +A+E+
Sbjct: 241 PDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEV 300
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M+R C PS TY +I+ Y K A+ L EM KP++ TYT L++ R
Sbjct: 301 IQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDR 360
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G + A ++++ G +P++ YNAL++ + + + G PD +
Sbjct: 361 AGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVT 420
Query: 321 YNIMVDAYGRAGL 333
+N ++ +G+ GL
Sbjct: 421 WNTLLAVFGQNGL 433
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A + ++AE + E+ + C P E +Y+ LL AY + L+K +A+ ++
Sbjct: 494 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + + + K N +A + F +++ C M+++YGK
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE 613
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ + M+ + TY +L++ ++R G CE+ E I +++ +G+ PD Y+YN ++ AY
Sbjct: 614 KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY 673
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
RL S M G +PD +YNI V +Y + E
Sbjct: 674 GRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFE 715
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE +LEL RC + ++ Y + ++ K E + M++ + SA YNS +
Sbjct: 576 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLM 635
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G+ +K I +K +P +Y +I YG+ + A +LF+EM+ K
Sbjct: 636 HMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLK 695
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P++ TY V ++ + EEA E+ + G +P+ YN+++E Y
Sbjct: 696 PDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + E + +P T+ LL + +GL + VF+E
Sbjct: 384 CTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 443
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+K G P Y S I + G A++I++RM P TY +++ + +
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY---- 295
A KLF EM CKP+ +Y++L++A+A ++ + + + + IEP +
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 296 ------AYNALMEAYRLISRMHMG-CEPDRASYNIMVDAYGR 330
N L EA + + C D N MV YG+
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 605
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG+ + +K E + +S + TY L+ Y G EK E + E++ G
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 658
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ I + G ++A +F MK +P TY + + Y S A+
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 718
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+L M + CKPN TY ++V + R G +A+ L
Sbjct: 719 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
P+ YTALV+AF+R G +A +F ++ +G++P + YN ++ Y
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L++ M G PDR +YN ++ R L++
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYK 260
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
EF Y E++ R PT ++ +++ C G L KA + +M+ G+ + + YN+ IDG
Sbjct: 148 EFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDG 207
Query: 199 ---LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K G KA I + M+ D P+ T+ ++I+ + K A+K+F EM
Sbjct: 208 YCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGV 267
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
KPN+ TY +L+N G EA + +Q+ + ++P++ +NAL+ +
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGE 327
Query: 306 LISRM-HMGCEPDRASYNIMVDAY 328
L M G P+ +YNI++DAY
Sbjct: 328 LFDDMPKQGITPNVTTYNILIDAY 351
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 23/267 (8%)
Query: 89 LPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI--------LLIEAY---GQKSLHK 136
+ PT +++ +IN ++ +LNK D I M + LI+ Y G+
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA+ E+ P E T+ +L+ +C + A VF EM + G+ P+ V YNS I
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL G +A + +M C +P+ T+ ++N + K A +LF++M
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---------MEAYR-L 306
PN+ TY L++A+ ++ E+A ++ + G G+ PDV YN L +EA R L
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNL 398
Query: 307 ISRMHMG-CEPDRASYNIMVDAYGRAG 332
+S M + D +YNI++D+ G
Sbjct: 399 VSEMDTKHLKADLITYNILIDSLCNKG 425
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 5/194 (2%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+AY + + A Y +L P TY L+ C G LE A + EM
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L + YN ID L G +KA+ + M R +PS TY MI+ Y K A
Sbjct: 406 HLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L L ++M N+ TY L+ F ++ E+A + ++ G+ P+ Y + E
Sbjct: 466 LNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEE 525
Query: 304 YRLISRMHMGCEPD 317
M G PD
Sbjct: 526 M-----MEKGFVPD 534
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + + K+A + ++ P TY +L+ AYC +E A A++R M G
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN I GL + G+ + A + M + TY ++I+ + AL
Sbjct: 372 VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKAL 431
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +EM KP+ TY +++ + +EG A + Q++ G +V YN L++ +
Sbjct: 432 RLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGF 491
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
L + G P+R +Y I+ + G
Sbjct: 492 CKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGF 531
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ + C G ++KA + EM + GL PS + YN+ IDG K GN + A+ + +M
Sbjct: 413 TYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM 472
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ + TY ++I + K K A L NEM PN TY + +G
Sbjct: 473 EKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532
Query: 276 EEAE 279
+ E
Sbjct: 533 PDIE 536
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F+ YGL S N + GL+K G +++ M R +P+ ++ ++IN K
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE---EAEEIFEQLQGAGIEPD 293
K A + +M+ N+ TY L++ + + G +A+ I ++++ GI P+
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPN 235
Query: 294 VYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+N L++ + ++ + M+ G +P+ +YN +++ G
Sbjct: 236 EVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNG 285
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +++L+K+A + E+ S P + T+ LL Y + ++A V +EM + G
Sbjct: 231 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVG 290
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PPS V YNS I +K G ++AV + Q M+ +P TYT +I+ +A K A+
Sbjct: 291 CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAI 350
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++EM + CKPN+CTY AL+ G E +F++ + AG PD+ +N L+
Sbjct: 351 VEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVF 410
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R +Y ++ +Y R GL +
Sbjct: 411 GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 452
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 46/253 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG+ H +A E+ C P+ TY L+ +Y GLLE+A A+ +EM G
Sbjct: 266 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 325
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y + I GL + G A+ + M R+ C+P+ TY +I ++G K +
Sbjct: 326 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 385
Query: 245 KLFNEMRSHKCKPNICT-----------------------------------YTALVNAF 269
+F+E RS P+I T Y +L++++
Sbjct: 386 AVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 445
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+R GL + A +I++++ AGI PDV YNA++ +A +L + M C+PD
Sbjct: 446 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 505
Query: 319 ASYNIMVDAYGRA 331
SY+ ++ AY A
Sbjct: 506 YSYSSLLHAYANA 518
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKY 183
L+ A+ + + A + ++DS P TY ++L Y M+ ++ + M+++
Sbjct: 160 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH 219
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I + ++A ++F MK +P T+ ++++YGKA + A
Sbjct: 220 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 279
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ EM C P++ TY +L++++ ++GL E+A + ++++ G++PDV Y L+
Sbjct: 280 IEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISG 339
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
++ GC+P+ +YN ++ +G G
Sbjct: 340 LDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRG 379
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 54/269 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ L + + E+ + IP DTY L+ +Y GL + A +++ M + G
Sbjct: 406 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 465
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS------ 238
+ P YN+ + L +GG ++A ++F M+ C+P +Y+ +++ Y A
Sbjct: 466 IYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMK 525
Query: 239 ------------------KSFM-----------ALKLFNEMRSHKCKPNICTYTALVNAF 269
K+ + A K F E+R +C +I A+V+ +
Sbjct: 526 ALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIY 585
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
+ + + E+I ++ + I YN+LM Y L G PDR
Sbjct: 586 GKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDR 645
Query: 319 ASYNIMVDAYGRAG--------LHEGKCS 339
SYN ++ AYGR G E KCS
Sbjct: 646 YSYNTVIYAYGRKGQMKEASRLFSEMKCS 674
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 90/169 (53%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E++ + C P TY L+K + + G + AVF E R G P V +N+ + +
Sbjct: 353 YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 412
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + +F+ MK+ P +TY +I+ Y + +A++++ M P++ T
Sbjct: 413 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 472
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
Y A+++A AR G E+AE++F +++ +PD Y+Y++L+ AY R+
Sbjct: 473 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRL 521
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ L ++A VF EM+ G P V +NS +D K +A+E+
Sbjct: 223 PDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEV 282
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M+R C PS TY +I+ Y K A+ L EM KP++ TYT L++ R
Sbjct: 283 IQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDR 342
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G + A ++++ G +P++ YNAL++ + + + G PD +
Sbjct: 343 AGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVT 402
Query: 321 YNIMVDAYGRAGL 333
+N ++ +G+ GL
Sbjct: 403 WNTLLAVFGQNGL 415
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE + E+ + C P E +Y+ LL AY + L+K +A+ ++ + P + +
Sbjct: 487 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 546
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K N +A + F +++ C M+++YGK K+ + M+
Sbjct: 547 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 606
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+ TY +L++ ++R G CE+ E I +++ +G+ PD Y+YN ++ AY R
Sbjct: 607 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 666
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
L S M G +PD +YNI V +Y + E
Sbjct: 667 LFSEMKCSGLKPDVVTYNIFVKSYVSNSMFE 697
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE +LEL RC + ++ Y + ++ K E + M++ + SA YNS +
Sbjct: 558 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLM 617
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G+ +K I +K +P +Y +I YG+ + A +LF+EM+ K
Sbjct: 618 HMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLK 677
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P++ TY V ++ + EEA E+ + G +P+ YN+++E Y
Sbjct: 678 PDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 725
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 11/222 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + E + +P T+ LL + +GL + VF+E
Sbjct: 366 CTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 425
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+K G P Y S I + G A++I++RM P TY +++ + +
Sbjct: 426 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 485
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY---- 295
A KLF EM CKP+ +Y++L++A+A ++ + + + + IEP +
Sbjct: 486 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 545
Query: 296 ------AYNALMEAYRLISRMHMG-CEPDRASYNIMVDAYGR 330
N L EA + + C D N MV YG+
Sbjct: 546 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 587
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG+ + +K E + +S + TY L+ Y G EK E + E++ G
Sbjct: 581 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 640
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ I + G ++A +F MK +P TY + + Y S A+
Sbjct: 641 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 700
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+L M + CKPN TY ++V + R G +A+ L
Sbjct: 701 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 741
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
P+ YTALV+AF+R G +A +F ++ +G++P + YN ++ Y
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L++ M G PDR +YN ++ R L++
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYK 242
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+LL C PT TY +L++A + G +++A + EM GL P YN+ I G+ K G
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A E+ + ++ C+P +Y +++ K KL +M S KC PN+ TY+
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ R+G EEA + + ++ G+ PD Y+Y+ L+ A+ R+ +
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD +YN ++ + G
Sbjct: 394 GCLPDIVNYNTVLATLCKNG 413
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E+L+ P Y L+ +C ++ A V MR P V YN I L
Sbjct: 143 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G A+++ ++ D CQP+ TYT++I ALKL +EM S KP++ TY
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM 312
++ +EG+ + A E+ L+ G EPDV +YN L+ E +L+++M
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 313 -GCEPDRASYNIMVDAYGRAG 332
C+P+ +Y+I++ R G
Sbjct: 323 EKCDPNVVTYSILITTLCRDG 343
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 16/189 (8%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K + + KA V + K+G P YN+ I+G K A + RM+
Sbjct: 126 LIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 184
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P T TY +MI K +ALK+ +++ S C+P + TYT L+ A EG +EA
Sbjct: 185 FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEAL 244
Query: 280 EIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAY 328
++ +++ G++PD++ YN ++ A+ +I + + GCEPD SYNI++
Sbjct: 245 KLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL--- 301
Query: 329 GRAGLHEGK 337
RA L++GK
Sbjct: 302 -RALLNQGK 309
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A + ++ E ++ +C P TY++L+ C G +E+A + + M++
Sbjct: 299 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 358
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P A Y+ I + G A+E + M D C P Y ++ K K+ A
Sbjct: 359 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 418
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L++F ++ C PN +Y + +A G A + ++ GI+PD YN+++
Sbjct: 419 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISC 478
Query: 302 --------EAYRLISRMHMGCE--PDRASYNIMVDAYGRA 331
+A+ L+ M CE P +YNI++ + +A
Sbjct: 479 LCREGMVDKAFELLVDMR-SCEFHPSVVTYNIVLLGFCKA 517
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +LL+A G E+ E + +M P+ V Y+ I L + G ++A+
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 349
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + MK P +Y +I + + + +A++ M S C P+I Y ++
Sbjct: 350 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 409
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDR 318
+ G ++A EIF +L G P+ +YN + A I +HM G +PD
Sbjct: 410 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDE 469
Query: 319 ASYNIMVDAYGRAGL 333
+YN M+ R G+
Sbjct: 470 ITYNSMISCLCREGM 484
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 142 YLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+LE ++ C+P Y +L C +G ++A +F ++ + G P++ YN+ L
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G+ +A+ + M + P TY MI+ + A +L +MRS + P++
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
TY ++ F + E+A ++ + + G G P+ Y L+E
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y + A SG +A + EM G+ P + YNS I L + G KA
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAF 489
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M+ PS TY +++ + KA + A+ + + M + C+PN TYT L+
Sbjct: 490 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549
Query: 270 AREGLCEEAEEIFEQL 285
G EA E+ L
Sbjct: 550 GFAGYRAEAMELANDL 565
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A LE++ + P E TY ++ C G+++KA + +MR PS V YN +
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
G K + A+++ M + C+P+ TYT++I G A A++L N++
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + +KA LE+ + +PT TY ++ SG +E A F EMR G
Sbjct: 308 LITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMG 367
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + YNS I+G K GN ++A+ +F +KR PS TY ++++ Y + A
Sbjct: 368 LLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEAR 427
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ EM C+P++ TYT L+N + E F+++ G++PD +AYN +
Sbjct: 428 RFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAE 487
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA++L M G D +YNI +D ++G
Sbjct: 488 LILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSG 526
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A +++++ P TY L+ A+C G L +A +F M GLPPSAV Y +
Sbjct: 529 KDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVF 588
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I + GN A FQ+M + +P+ TY ++I+ + ++ +A + F+EM
Sbjct: 589 IHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGL 648
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PN TYT L++ +EG EEA ++ ++ GI PD +NAL + +
Sbjct: 649 SPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ Y G +EKA A+ EM G+ P+ V YN+ I G+ + GN + A F M
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P TY +IN Y KA AL LF +++ P++ TY L++ + R G
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
EEA +++ G +PDV Y LM R + + M G +PD +YN
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483
Query: 325 VDA 327
+ A
Sbjct: 484 ISA 486
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 16/246 (6%)
Query: 94 ATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTY-LELLDSRCIP 152
A WDD+ +V ++ L +P ++ + LL + + + + A+ +E C+P
Sbjct: 210 ARWDDMRSVYAEM-LQLGIEPSIV--TYNTLLDSFFREGRVDQAAKLLREMEARPGGCLP 266
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
++ TY +++ G LEKA + MR SA +N I G G+ +KA +
Sbjct: 267 SDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVEKAGALQ 325
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M+ + P+ TY +I+ ++ A F EMR+ P++ TY +L+N + +
Sbjct: 326 LEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKA 385
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASY 321
G +EA +F L+ AG+ P V YN L++ Y R M GC+PD ++Y
Sbjct: 386 GNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTY 445
Query: 322 NIMVDA 327
I+++
Sbjct: 446 TILMNG 451
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 140 FTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F E++ SR I ++ TY + L C SG L+ A ++ +M GL P + Y I
Sbjct: 497 FQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHA 556
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ G ++A +IF M PS TYT+ I+ Y + + A F +M +PN
Sbjct: 557 HCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPN 616
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
TY L++A R G A + F ++ G+ P+ Y Y L+ EA RL S
Sbjct: 617 EVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYS 676
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
MH G PD ++N + G EG+ +++
Sbjct: 677 EMHQHGIHPDHCTHNALFK-----GFDEGQSKHAI 706
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RKYGLPPSAVVYNSYIDG 198
Y E+L P+ TY LL ++ G +++A + REM R G PS V YN I+G
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L + G +KA ++ RM R + S T+ +I Y A L EM + P
Sbjct: 278 LARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPT 336
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-------- 310
+ TY +++ R G E A F +++ G+ PD+ YN+L+ Y +
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG 396
Query: 311 ---HMGCEPDRASYNIMVDAYGRAG 332
G P +YNI++D Y R G
Sbjct: 397 DLKRAGLAPSVLTYNILLDGYCRLG 421
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+S +IL+ + ++L EF + E+L P Y + A + G +A +
Sbjct: 442 VSTYTILMNGSRKVRNLAMVREF-FDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLT 500
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
M G+ V YN ++DGL K GN + A ++ +M D QP TYT +I+ + +
Sbjct: 501 EVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCER 560
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A +F+ M P+ TYT ++A+ R G A F+++ G+ P+ Y
Sbjct: 561 GRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTY 620
Query: 298 NALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
N L+ A + R ++ G P++ +Y +++D + G
Sbjct: 621 NVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEG 666
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ ++A + +L S P+ TY + + AYC G L A F++M + G
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YN I L + G A + F M P+ TYTL+I+ K A+
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+L++EM H P+ CT+ AL F EG + A + E +
Sbjct: 673 RLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHAIQYMENV 712
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y + ++A E+++ C P TY +L+ L F EM
Sbjct: 412 ILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSK 471
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ I L G+ +A ++ + M T TY + ++ K+ A
Sbjct: 472 GLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDA 531
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ +M S +P+ TYT L++A G EA +IF+ + +G+ P Y + A
Sbjct: 532 YVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591
Query: 304 Y----RLIS-------RMHMGCEPDRASYNIMVDAYGRAG 332
Y L S + G P+ +YN+++ A R G
Sbjct: 592 YCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMG 631
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 49/206 (23%)
Query: 175 AVFREMRKYGLP-----------------------------------PSAVVYNSYIDGL 199
A FREM +G+P PS V YN+ +D
Sbjct: 182 AAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSF 241
Query: 200 LKGGNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G +A ++ + M + C PS TY ++IN + + A +L + MR K K
Sbjct: 242 FREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KA 300
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYRL-- 306
+ T+ L+ + G E+A + +++ GI P V YN ++ EA R+
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
+ MG PD +YN +++ Y +AG
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAG 386
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
S + L F EM H P I ++ A E ++ ++ ++ GIEP + YN
Sbjct: 177 STLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNT 236
Query: 300 LMEAY----------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
L++++ +L+ M GC P +YN++++ R G
Sbjct: 237 LLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKG 282
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 144 ELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD + C PT TY ++ AY + L++A VF EM++ G P V Y + ID
Sbjct: 381 ELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIH 440
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G A++++ RM+ P T TY++M+N GK + A KLF EM + C PN+
Sbjct: 441 AKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNL 500
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TY ++ A+ E ++++ +Q AG PD Y+ +M EA +
Sbjct: 501 VTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIE 560
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
M PD Y ++VD +G+AG
Sbjct: 561 MRRDWAPDEPVYGLLVDLWGKAG 583
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ FQ +KR QP TYT MI + G+A + + +L +EM CKP + TY
Sbjct: 343 ALGFFQWLKR---QPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYN 399
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
+++A+ R +EA ++FE++Q AG EPD Y L++ A L RM +
Sbjct: 400 RIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEV 459
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y++MV+ G+ G
Sbjct: 460 GLSPDTFTYSVMVNCLGKGG 479
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AYG+ + K+A + E+ ++ P TY L+ + +G L+ A ++ M++ G
Sbjct: 401 IIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVG 460
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ ++ L KGG A ++F M + C P+ TY +MI L KA +
Sbjct: 461 LSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVV 520
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ------------------ 286
KL+ +M+ +P+ TY+ ++ G +EAE +F +++
Sbjct: 521 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWG 580
Query: 287 ----------------GAGIEPDVYAYNALMEAYRLISR 309
G++P+V N+L+ A+ ++R
Sbjct: 581 KAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNR 619
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E++++ C P TY +++ + E ++++M+ G P + Y+ ++ L
Sbjct: 488 FCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGH 547
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ +A +F M+RD P Y L+++L+GKA AL + M +PN+ T
Sbjct: 548 CGHLDEAEAVFIEMRRDWA-PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPT 606
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L++AF + ++A + + + G+ P V Y L+
Sbjct: 607 CNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYTLLL 646
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY+++++ G L++AEAVF EMR+ P VY +D K GN KA+
Sbjct: 533 PDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLVDLWGKAGNVDKALGW 591
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN---- 267
+Q M +D QP+ T +++ + K ++ A + M + P++ TYT L++
Sbjct: 592 YQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYTLLLSCCTV 651
Query: 268 AFAREGLC 275
A+ GLC
Sbjct: 652 GQAQMGLC 659
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G +AE ++E+ P E Y LL+ + +G ++KA ++ M +
Sbjct: 540 IVMEVLGHCGHLDEAEAVFIEMRRDWA-PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQD 598
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ NS + LK Q A + Q M PS +TYTL+++
Sbjct: 599 GLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYTLLLS 647
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
ELL C PT TY +L++A + G ++ A + EM GL P + YN+ I G+ K
Sbjct: 198 ELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEM 257
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA E+ + + C+P TY +++ K KL +EM S CKPN+ T++
Sbjct: 258 MVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHS 317
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ R+G EEA + ++ G++PD Y Y+ L+ + R+ +
Sbjct: 318 ILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISD 377
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD +YN ++ R G
Sbjct: 378 GCLPDIVNYNTIMAGLCRTG 397
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E+L+ P Y L+ + + LE A V M+ G P V YN I
Sbjct: 127 MEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR 186
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G A+EIF+ + +D C+P+ TYT++I +A+KL +EM S +P+ TY
Sbjct: 187 GKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTY 246
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
A++ +E + ++A E+ L G +PD+ YN L+ E +LIS M
Sbjct: 247 NAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS 306
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+GC+P+ +++I++ R G
Sbjct: 307 IGCKPNVVTHSILIGTLCRDG 327
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K + S + KA V + +YG P YN+ I G +K + A + RMK
Sbjct: 110 LIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRG 168
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P TY +MI + K +AL++F E+ C+P + TYT L+ A +G + A
Sbjct: 169 FLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAM 228
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
++ +++ G+EPD YNA++ +A+ L+ + GC+PD +YNI++
Sbjct: 229 KLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILL--- 285
Query: 329 GRAGLHEGKCS 339
R L GK S
Sbjct: 286 -RTLLSRGKWS 295
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 12/214 (5%)
Query: 132 KSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K + F L L SR C P TY +LL+ G + E + EM G P+ V
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
++ I L + G ++AV + + MK +P Y +I + + + +A + M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA------- 303
S C P+I Y ++ R G ++A E+FE+L G P+V +YN L A
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434
Query: 304 YR----LISRMHMGCEPDRASYNIMVDAYGRAGL 333
YR ++ ++ G +PD +YN ++ R G+
Sbjct: 435 YRALEMILKLLNQGIDPDEITYNSLISCLCRDGM 468
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P T+++L+ C G +E+A + R M++ GL P A Y+ I G + G
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A E + M D C P Y ++ + K+ AL++F ++ C PN+ +Y
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
L +A G A E+ +L GI+PD YN+L+ EA L+ M G
Sbjct: 423 TLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482
Query: 314 -CEPDRASYNIMV 325
P+ SYNI++
Sbjct: 483 RYRPNVVSYNIIL 495
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ +C G L+ A M G P V YN+ + GL + G +A+E+
Sbjct: 346 PDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEV 405
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+++ C P+ +Y + + + + AL++ ++ + P+ TY +L++ R
Sbjct: 406 FEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCR 465
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+G+ +EA E+ +Q P+V +YN ++ +A +++ M GC+P+ +
Sbjct: 466 DGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETT 525
Query: 321 YNIMVDAYGRAGLH 334
Y ++++ G +GL
Sbjct: 526 YILLIEGIGFSGLR 539
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +++ ++C G L+ A +F E+ K P+ + Y I+ + G A++
Sbjct: 170 LPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMK 229
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M +P T TY +I K A +L + S CKP+I TY L+
Sbjct: 230 LLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLL 289
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
G E E++ ++ G +P+V ++ L+ EA L+ M G +PD
Sbjct: 290 SRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAY 349
Query: 320 SYNIMVDAYGRAG 332
Y+ ++ + R G
Sbjct: 350 CYDPLIAGFCREG 362
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 142 YLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+LE ++ C+P Y ++ C +G ++A VF ++ + G PP+ YN+ L
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G+ +A+E+ ++ P TY +I+ + A++L +M+S + +PN+
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+Y ++ + +A E+ + G +P+ Y L+E
Sbjct: 490 SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEG 532
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y L A SG +A + ++ G+ P + YNS I L + G +A+
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M+ +P+ +Y +++ K +++ A+++ M C+PN TY L+
Sbjct: 474 ELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533
Query: 270 AREGLCEEAEEIFEQLQGA-GIEPDVYAYNALMEAYRLI 307
GL EA E+ L G I D ++N L + + L+
Sbjct: 534 GFSGLRAEAMELANSLHGMNAISED--SFNRLNKTFPLL 570
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
L+LL+ P E TY L+ C G++++A + +M+ P+ V YN + GL K
Sbjct: 442 LKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKV 501
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
A+E+ M CQP+ TY L+I G + A++L N +
Sbjct: 502 NRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 20/268 (7%)
Query: 77 VDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNK-KWDPIVLMSCVSILLIEAYGQKSLH 135
V N I D F + +W ++ V ++R K+D +C ++L A ++ L
Sbjct: 253 VTYNVILDVFGKM---GRSWRKILGVLEEMRSKGLKFDEF---TCSTVL--SACAREGLL 304
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ + EL P TY LL+ + +G+ +A +V +EM + P +V YN
Sbjct: 305 REAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNEL 364
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ + G ++A + + M + P+ TYT +I+ YGKA K ALKLF M+ C
Sbjct: 365 VAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 424
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
PN CTY A+++ ++ E ++ ++ G P+ +N ++ R
Sbjct: 425 VPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNR 484
Query: 306 LISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ M G EPDR ++N ++ AYGR G
Sbjct: 485 VFREMKSCGFEPDRDTFNTLISAYGRCG 512
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ ++ +A E+ ++ C TY L+ AY +G ++A V M + G
Sbjct: 329 LLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKG 388
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ Y + ID K G +A+++F MK C P+T TY ++++ GK S+S +
Sbjct: 389 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMI 448
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ +M+S+ C PN T+ ++ +G+ + +F +++ G EPD +N L+ AY
Sbjct: 449 KMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 508
Query: 305 ----RLISRMHMGCEPDRASYNIMVDAY 328
+ M E RA +N V Y
Sbjct: 509 GRCGSEVDASKMYGEMTRAGFNACVTTY 536
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEM 250
Y + + + G +KA+ +F+RMK P+ TY ++++++GK +S+ L + EM
Sbjct: 220 YTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEM 279
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
RS K + T + +++A AREGL EA++ F +L+ G EP YNAL+
Sbjct: 280 RSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVY 339
Query: 302 -EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
EA ++ M C D +YN +V AY RAG
Sbjct: 340 TEALSVLKEMEENNCPADSVTYNELVAAYARAGF 373
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 59/288 (20%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ + + L L+ + L V +L+ G++S + A +LLD IP +D
Sbjct: 159 WERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAA----KLLDK--IPLQD 212
Query: 156 ------TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP---- 205
Y +L AY +G EKA +F M++ G P+ V YN +D K G
Sbjct: 213 YMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI 272
Query: 206 --------------------------------QKAVEIFQRMKRDCCQPSTETYTLMINL 233
++A + F +K +P T TY ++ +
Sbjct: 273 LGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQV 332
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+GKA AL + EM + C + TY LV A+AR G +EA + E + G+ P+
Sbjct: 333 FGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPN 392
Query: 294 VYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGR 330
Y +++AY +L M GC P+ +YN ++ G+
Sbjct: 393 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGK 440
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 105/262 (40%), Gaps = 48/262 (18%)
Query: 119 SCVSI--LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG-------- 168
+CV+ L+ A +K + E ++ PTE +Y+L+L+ Y G
Sbjct: 531 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 590
Query: 169 ---------------------------LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L +E F +K+G P V++NS + +
Sbjct: 591 EEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 650
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A I Q + D P TY ++++Y + + + A ++ + + KP++ +
Sbjct: 651 NNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVS 710
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS-----------RM 310
Y ++ F R+GL +EA + ++ GI P ++ YN + Y +
Sbjct: 711 YNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMA 770
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
C P+ ++ ++VD Y RAG
Sbjct: 771 KNDCRPNELTFKMVVDGYCRAG 792
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 46/252 (18%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G K + K + E+ P DT+ L+ AY G A ++ EM + G
Sbjct: 474 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 533
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---------- 239
YN+ ++ L + G+ + + MK +P+ +Y+LM+ Y K
Sbjct: 534 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEG 593
Query: 240 --------SFMALKL-----------------FNEMRSHKCKPNICTYTALVNAFAREGL 274
S+M L+ F + H KP++ + ++++ F R +
Sbjct: 594 INEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 653
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNI 323
++AE I + + G+ PD+ YN+LM+ Y L + +PD SYN
Sbjct: 654 YDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 713
Query: 324 MVDAYGRAGLHE 335
++ + R GL +
Sbjct: 714 VIKGFCRKGLMQ 725
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 68/128 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y ++ KAE L S+ P +Y ++K +C GL+++A + EM + G
Sbjct: 679 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERG 738
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+++ G G + ++ + M ++ C+P+ T+ ++++ Y +A K A+
Sbjct: 739 IRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 798
Query: 245 KLFNEMRS 252
+++++
Sbjct: 799 DFVSKIKT 806
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 194 SYIDGLLKGGNPQKAVEIFQRM----KRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
S + GL G+ ++AV +F+ + + +++ + G+ S+ +A KL ++
Sbjct: 148 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDK 207
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
+ ++ YT +++A++R G E+A +FE+++ G P + YN +++ + + R
Sbjct: 208 IPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGR 267
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
++KA E++ IP TY+ +L C + +E A +F EM++ GL Y
Sbjct: 423 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 482
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D K G ++A + F M+ C P+ TYT +I+ Y KA K A +LF M S
Sbjct: 483 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 542
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD----------------VYAYN 298
C PNI TY+AL++ + G E+A +IFE++ G+ PD V Y
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 602
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
AL+ EA +L+ M M GCEP++ Y+ ++D + G
Sbjct: 603 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL +C S +E+A + M G P+ +VY++ IDGL K G +A E+
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + TY+ +I+ Y K + +A K+ ++M + C PN+ YT +++ +
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G +EA ++ + ++ G +P+V Y A+++ + +I ++ G P+ +
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV-ELSVKHYPA 352
Y +++D + G + +++L+ E+ H+P
Sbjct: 776 YRVLIDHCCKNGALD--VAHNLLEEMKQTHWPT 806
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + + + + + C +G EKA +V REM G P Y+ ++
Sbjct: 391 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 450
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + A +F+ MKR TYT+M++ + KA A K FNEMR C P
Sbjct: 451 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 510
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A E+FE + G P++ Y+AL++ + ++ C+
Sbjct: 511 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 568
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P + Y L+ C G L++A+ V EM ++G P + Y+S ID K A
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT MI+ K K+ A KL M C+PN+ TYTA+++ F
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
G E E+ E++ G+ P+ Y L++
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++++ + L ++A + E+ + C P TY L+ AY + + A +F M
Sbjct: 482 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 541
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ V Y++ IDG K G +KA +IF+RM + +P+ TY
Sbjct: 542 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 601
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ + K+ + A KL + M C+PN Y AL++ + G +EA+E+ ++
Sbjct: 602 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 661
Query: 288 AGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAG 332
G +Y Y++L++ Y + R + C P+ Y M+D + G
Sbjct: 662 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS------GLLEKAEAVFR 178
L+ AY H A +++ +P Y +L+ + C LL+ AE +
Sbjct: 337 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYS 396
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ + + +S+ L G +KA + + M P T TY+ ++N AS
Sbjct: 397 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 456
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K +A LF EM+ ++ TYT +V++F + GL E+A + F +++ G P+V Y
Sbjct: 457 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 516
Query: 299 ALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
AL+ AY L M GC P+ +Y+ ++D + +AG E C
Sbjct: 517 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L D R P+ TY L++A+ + L+ A + REM L + L K G
Sbjct: 185 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK 244
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+ + ++ + P T YT +I+ +AS A+ N MR+ C PN+ TY+
Sbjct: 245 WREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 301
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ + + + + G P +N+L+ AY+L+ +M G
Sbjct: 302 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 361
Query: 314 CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
P YNI++ G + ++ L++L+ K Y
Sbjct: 362 HMPGYVVYNILI---GSICGDKDSLNFDLLDLAEKAY 395
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A ++L++ C P Y ++ C G ++A + + M + G
Sbjct: 674 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 733
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDG G + +E+ +RM P+ TY ++I+ K +A
Sbjct: 734 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 793
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L EM+ + Y ++ F +E + E+ + +++ P + Y L++
Sbjct: 794 NLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNL 851
Query: 305 RLISRMHMG 313
R+ M
Sbjct: 852 IKAQRLEMA 860
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 52/237 (21%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y L+ C + L E+A MR P+ V Y++ + G L +
Sbjct: 258 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 317
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL----- 265
+ M + C PS + + +++ Y + A KL +M P Y L
Sbjct: 318 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 377
Query: 266 --------------------------------VNAFAR----EGLCEEAEEIFEQLQGAG 289
V++F R G E+A + ++ G G
Sbjct: 378 GDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 437
Query: 290 IEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
PD Y+ ++ S+M + G D +Y IMVD++ +AGL E
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 494
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 17/225 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RK 182
+ I A G+ + +AE + + + + P TY+ L++ GL +A + FR M R
Sbjct: 317 IYITALGRLERYSEAERSLIWMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRI 376
Query: 183 YGLPPSAVVYNSYIDGLLK-----GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
+ P+ V YN+ I + + G +A+ + + M C P TY +I+ + K
Sbjct: 377 DNIAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKR 436
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ ALKLF EM+ KPN Y++L++AF R G E A IFE++ I PDV+A+
Sbjct: 437 MEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAF 496
Query: 298 NALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
NAL++ A+ + RM + +PDR ++N ++ A G+A
Sbjct: 497 NALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKA 541
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 20/227 (8%)
Query: 125 LIEAYGQKSLHKKA--EFTYLELLDSRCIPTEDTYALLLK--AYCMS---GLLEKAEAVF 177
LIE G+ L +A +F + +D+ P TY ++K + C G + +A ++
Sbjct: 353 LIETLGKGGLCVRALSQFRRMSRIDN-IAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLL 411
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
REM G P V Y + ID K P++A+++FQ MK +P+ Y+ +I+ + +A
Sbjct: 412 REMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRA 471
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
AL +F EM + P++ + AL++ F + ++A EI+++++ I+PD +
Sbjct: 472 GYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITF 531
Query: 298 NALMEA-------YRLISRMH-----MGCEPDRASYNIMVDAYGRAG 332
NAL+ A R + M G PDR SYN ++DA G++G
Sbjct: 532 NALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSG 578
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS-GLLEKAEAVFREMRKY 183
LI+ +G+ KA Y + + P T+ L+ A + + EA+ Y
Sbjct: 499 LIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIY 558
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ ID K G+ KA E+F+ M+ +P T T+ +I ++ +
Sbjct: 559 GLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAAS 618
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ + M P+ T L++A R A E+ E+ + G+ PD +N ++A
Sbjct: 619 FKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDA 678
Query: 304 ----------YRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ L+S M G P + + N +V GR G
Sbjct: 679 VGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRG 718
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
+N +D LLKGG ++ +++F M + + ++++ I G+ + A + MR
Sbjct: 280 WNYTMDALLKGGKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLIWMR 339
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-GIEPDVYAYNALME-------- 302
+PNI TY+AL+ + GLC A F ++ I P+ YNA+++
Sbjct: 340 EEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRN 399
Query: 303 -------AYRLISRMHM-GCEPDRASYNIMVDAYGR 330
A L+ M GC PD +Y ++DA+ +
Sbjct: 400 DCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSK 435
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ KA + E+ P T+ L+ S L + + M + G
Sbjct: 570 LIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEG 629
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P A N+ I + + A E+ ++ K+ P T+ I+ GK S
Sbjct: 630 LNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMF 689
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +EM S P+ T +V R G + E F +EPD ++ L+E Y
Sbjct: 690 ELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVTFSLLIENY 749
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 129 YGQKSLHK-KAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
YG H A F ++L+ + P T L+ A L A V + ++ G+
Sbjct: 607 YGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVH 666
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P V +N++ID + K + +K E+ M+ PS T ++ G+ K + +
Sbjct: 667 PDNVTFNTFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERG 726
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
F+ + +P+ T++ L+ + L ++A
Sbjct: 727 FHMFHEKRLEPDSVTFSLLIENYVSHHLLDKA 758
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
T + ++ K K+ L +F M S++ K ++ +++ + A R EAE
Sbjct: 277 TRNWNYTMDALLKGGKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLI 336
Query: 284 QLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCEPDRASYNIMVDAYGR 330
++ I+P++Y Y+AL+E +R +SR+ P+ +YN ++ R
Sbjct: 337 WMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRID-NIAPNTVTYNAVIKIVSR 395
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +++ P+ + +KA+C +G L++A + EM K +P + V+YN ID +
Sbjct: 162 YQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGR 221
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--GKASKSF-MALKLFNEMRSHKCKPN 258
G ++A + M+ QP+ TY +I Y K + F +A L EM + P+
Sbjct: 222 VGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPD 281
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------R 305
+ T+T L+ A+ EGL E+AE++F +++ G++P+ Y+Y AL+ AY
Sbjct: 282 VVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFE 341
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRAG 332
+I + G P +Y ++DAY RAG
Sbjct: 342 MIRK--QGVNPTVETYTALLDAYRRAG 366
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV---EIFQ 213
Y +L+ AY G LE+AE + EMR+ G+ P+ YN+ I G L+ ++ V + +
Sbjct: 212 YNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIE 271
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M+ P T+T+++ YG + A ++FN M++ +PN +YTAL+NA+A
Sbjct: 272 EMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERR 331
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYN 322
E+A FE ++ G+ P V Y AL++AYR + M GC R +Y
Sbjct: 332 CPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYM 391
Query: 323 IMVDAYGRAG 332
++DA+ + G
Sbjct: 392 TILDAFQKQG 401
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ S P T+ +LL AY GL E+AE VF M+ G+ P++ Y + I+ +
Sbjct: 272 EMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERR 331
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
P+KA F+ +++ P+ ETYT +++ Y +A M ++ M+ C TY
Sbjct: 332 CPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYM 391
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHM 312
+++AF ++G +EA ++ E+ + G +PD+ YN L+ +Y L+
Sbjct: 392 TILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTA 451
Query: 313 GCEPDRASYNIMVDAYGRA 331
G PD +Y ++ + R
Sbjct: 452 GFLPDSFTYCTLIYGFLRV 470
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 89/181 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ AYG + L ++AE + + P +Y L+ AY EKA F +RK
Sbjct: 287 MLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQ 346
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ Y + +D + G+ + +++ MK + C + TY +++ + K + A
Sbjct: 347 GVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEA 406
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L E ++ KP++ Y L+N++ R G +A +I +++ AG PD + Y L+
Sbjct: 407 RDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYG 466
Query: 304 Y 304
+
Sbjct: 467 F 467
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYTLMINLY 234
++ + Y + P +V ++ ++ +KGG K V ++Q M + PS + I +
Sbjct: 125 LYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAF 184
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
A + AL + EM N+ Y L++A+ R G EEAE + +++ GI+P+V
Sbjct: 185 CDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNV 244
Query: 295 YAYNALMEAYR-------------LISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
YNAL+ Y LI M G PD ++ +++ AYG GL E
Sbjct: 245 GTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTE 299
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY ++ +KA + + PT +TY LL AY +G LE +AV++ M+ G
Sbjct: 323 LINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEG 382
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V Y + +D K G ++A ++ + K +P Y +++N Y + + A
Sbjct: 383 CVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKAS 442
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ EM++ P+ TY L+ F R +A + ++ G PD Y L
Sbjct: 443 DILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPDPKTYAKL 498
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
++KA E++ IP TY+ +L C + +E A +F EM++ GL Y
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D K G ++A + F M+ C P+ TYT +I+ Y KA K A +LF M S
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD----------------VYAYN 298
C PNI TY+AL++ + G E+A +IFE++ G+ PD V Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
AL+ EA +L+ M M GCEP++ Y+ ++D + G
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL +C S +E+A + M G P+ +VY++ IDGL K G +A E+
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + TY+ +I+ Y K + +A K+ ++M + C PN+ YT +++ +
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G +EA ++ + ++ G +P+V Y A+++ + +I ++ G P+ +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV-ELSVKHYPA 352
Y +++D + G + +++L+ E+ H+P
Sbjct: 817 YRVLIDHCCKNGALD--VAHNLLEEMKQTHWPT 847
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + + + + + C +G EKA +V REM G P Y+ ++
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + A +F+ MKR TYT+M++ + KA A K FNEMR C P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A E+FE + G P++ Y+AL++ + ++ C+
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P + Y L+ C G L++A+ V EM ++G P + Y+S ID K A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT MI+ K K+ A KL M C+PN+ TYTA+++ F
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
G E E+ E++ G+ P+ Y L++
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++++ + L ++A + E+ + C P TY L+ AY + + A +F M
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ V Y++ IDG K G +KA +IF+RM + +P+ TY
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ + K+ + A KL + M C+PN Y AL++ + G +EA+E+ ++
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 288 AGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAG 332
G +Y Y++L++ Y + R + C P+ Y M+D + G
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS------GLLEKAEAVFR 178
L+ AY H A +++ +P Y +L+ + C LL+ AE +
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ + + +S+ L G +KA + + M P T TY+ ++N AS
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K +A LF EM+ ++ TYT +V++F + GL E+A + F +++ G P+V Y
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 299 ALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
AL+ AY L M GC P+ +Y+ ++D + +AG E C
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 14/192 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L D R P+ TY L++A+ + L+ A + REM L + L K G
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK 285
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+ + ++ + P T YT +I+ +AS A+ N MR+ C PN+ TY+
Sbjct: 286 WREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ + + + + G P +N+L+ AY+L+ +M G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 314 CEPDRASYNIMV 325
P YNI++
Sbjct: 403 HMPGYVVYNILI 414
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A ++L++ C P Y ++ C G ++A + + M + G
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDG G + +E+ +RM P+ TY ++I+ K +A
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L EM+ + Y ++ F +E + E+ + +++ P + Y L++
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 305 RLISRMHMG 313
R+ M
Sbjct: 893 IKAQRLEMA 901
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 52/237 (21%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y L+ C + L E+A MR P+ V Y++ + G L +
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL----- 265
+ M + C PS + + +++ Y + A KL +M P Y L
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 266 --------------------------------VNAFAR----EGLCEEAEEIFEQLQGAG 289
V++F R G E+A + ++ G G
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 290 IEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
PD Y+ ++ S+M + G D +Y IMVD++ +AGL E
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
++KA E++ IP TY+ +L C + +E A +F EM++ GL Y
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D K G ++A + F M+ C P+ TYT +I+ Y KA K A +LF M S
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD----------------VYAYN 298
C PNI TY+AL++ + G E+A +IFE++ G+ PD V Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
AL+ EA +L+ M M GCEP++ Y+ ++D + G
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL +C S +E+A + M G P+ +VY++ IDGL K G +A E+
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + TY+ +I+ Y K + +A K+ ++M + C PN+ YT +++ +
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G +EA ++ + ++ G +P+V Y A+++ + +I ++ G P+ +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV-ELSVKHYPA 352
Y +++D + G + +++L+ E+ H+P
Sbjct: 817 YRVLIDHCCKNGALD--VAHNLLEEMKQTHWPT 847
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + + + + + C +G EKA +V REM G P Y+ ++
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + A +F+ MKR TYT+M++ + KA A K FNEMR C P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A E+FE + G P++ Y+AL++ + ++ C+
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P + Y L+ C G L++A+ V EM ++G P + Y+S ID K A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT MI+ K K+ A KL M C+PN+ TYTA+++ F
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
G E E+ E++ G+ P+ Y L++
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++++ + L ++A + E+ + C P TY L+ AY + + A +F M
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G P+ V Y++ IDG K G +KA +IF+RM + +P+ TY
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ + K+ + A KL + M C+PN Y AL++ + G +EA+E+ ++
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 288 AGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAG 332
G +Y Y++L++ Y + R + C P+ Y M+D + G
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS------GLLEKAEAVFR 178
L+ AY H A +++ +P Y +L+ + C LL+ AE +
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ + + +S+ L G +KA + + M P T TY+ ++N AS
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K +A LF EM+ ++ TYT +V++F + GL E+A + F +++ G P+V Y
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 299 ALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKC 338
AL+ AY + + GC P+ +Y+ ++D + +AG E C
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 14/192 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L D R P+ TY L++A+ + L+ A + REM L + L K G
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK 285
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+ + ++ + P T YT +I+ +AS A+ N MR+ C PN+ TY+
Sbjct: 286 WREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ + + + + G P +N+L+ AY+L+ +M G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 314 CEPDRASYNIMV 325
P YNI++
Sbjct: 403 HMPGYVVYNILI 414
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A ++L++ C P Y ++ C G ++A + + M + G
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDG G + +E+ +RM P+ TY ++I+ K +A
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L EM+ + Y ++ F +E + E+ + +++ P + Y L++
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 305 RLISRMHMG 313
R+ M
Sbjct: 893 IKAQRLEMA 901
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 52/237 (21%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y L+ C + L E+A MR P+ V Y++ + G L +
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL----- 265
+ M + C PS + + +++ Y + A KL +M P Y L
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 266 --------------------------------VNAFAR----EGLCEEAEEIFEQLQGAG 289
V++F R G E+A + ++ G G
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 290 IEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
PD Y+ ++ S+M + G D +Y IMVD++ +AGL E
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++ +K E +E+ + +PT TY ++ S +E A+ F EMR G
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + YNS ++G K GN ++A+ + ++R P+ TY +I+ Y + A
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L EM C P++CTYT L+N + A E F+++ G++PD +AYN + A
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAE 499
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
++ H G PD +YN+++D + G
Sbjct: 500 LILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 538
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 89 LPPTHATWDDLINVSVQL----RLNKKWDPIVLMSCV------SILLIEAYGQKSLHKKA 138
L PT T++ LI+ +L + + +V C +IL+ ++ ++L
Sbjct: 415 LAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAR 474
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
EF + E+L P Y + A + G KA + M G+ P V YN IDG
Sbjct: 475 EF-FDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDG 533
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K GN + A ++ +M D QP TYT +I+ + + A KL N M S +P+
Sbjct: 534 LCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPS 593
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----RLISRMHM- 312
+ TYT L++ R G A F ++ GIEP+ YN L+ A L++ H
Sbjct: 594 VVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFH 653
Query: 313 -----GCEPDRASYNIMVDAYGRAG 332
G P++ +Y +++D R G
Sbjct: 654 EMLERGLAPNKYTYTLLIDGNCREG 678
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A+ ++++ P TY L+ A+C GLL +A + M GL PS V Y
Sbjct: 541 KDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTIL 600
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I + GN A F++M +P+ TY ++I+ + ++ +A F+EM
Sbjct: 601 IHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGL 660
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PN TYT L++ REG +A ++ ++ GI PD +NAL + +
Sbjct: 661 APNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD--CCQPSTETYT 228
+ AV+REM + + P+ V YN+ +D LK G +A + + M+ C + TY
Sbjct: 225 DDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYN 284
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++I+ + A KL + MR K K + TY L+ A G ++ E + +++
Sbjct: 285 VVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENE 343
Query: 289 GIEPDVYAYNALM---------EAYRL-ISRMH-MGCEPDRASYNIMVDAYGRAG 332
GI P + YNA++ EA +L + M MG PD +YN M++ Y +AG
Sbjct: 344 GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAG 398
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 47/234 (20%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG---------------- 184
Y E+L PT TY LL ++ G ++A + +EM G
Sbjct: 230 VYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISF 289
Query: 185 --------------------LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
S+ YN I LL+ G QK + M+ + P+
Sbjct: 290 LAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTL 349
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +I+ K+ + A F EMR+ P++ TY +++N + + G +EA +
Sbjct: 350 VTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGD 409
Query: 285 LQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
L+ AG+ P V YN L++ Y RL M GC PD +Y I+++
Sbjct: 410 LRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG 463
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++LD P E TY +L+ A C +G A F EM + GL P+ Y IDG +
Sbjct: 617 FRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCR 676
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
GN A+ ++ M ++ P T+ + + K
Sbjct: 677 EGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKG 712
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 15/229 (6%)
Query: 88 SLPPTHATWDDLI---------NVSVQL---RLNKKWDPIVLMSCVSILLIEAYGQKSLH 135
+PP T+ LI + ++QL LN++ P ++ LI+ ++
Sbjct: 81 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT---LIDGMCRQGDL 137
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KA + ++ P TY++L+ ++C G +E A EM G+ P+ + YNS
Sbjct: 138 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 197
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G + GN K + Q+M + P TY +I+ Y K K A KL N M K
Sbjct: 198 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 257
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+P++ TY L+N F+ G +EA IFE++ GIEPD Y Y +++ +
Sbjct: 258 QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 306
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ YC+ G L+KA +F M L P V YN+ IDG+ + G+ KA +++ M
Sbjct: 88 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 147
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TY+++I+ + + + A +EM + PNI TY +++ + R G
Sbjct: 148 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 207
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIM 324
+ ++ +++ + PD+ YN L+ Y +MH +PD +YN++
Sbjct: 208 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 267
Query: 325 VDAYGRAG 332
++ + G
Sbjct: 268 INGFSVHG 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I + + L A E++ C+P TY LL C L AE + EM
Sbjct: 18 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 77
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G+PP + + I G G KA+++F M +P TY +I+ +
Sbjct: 78 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 137
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A L+++M S + PN TY+ L+++ +G E+A +++ GI P++ YN++
Sbjct: 138 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 197
Query: 301 MEAY----------RLISRMHMG-CEPDRASYNIMVDAY 328
++ Y + + +M + PD +YN ++ Y
Sbjct: 198 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A REMR +GL P V+Y I G + G A+ + M C P TY ++N
Sbjct: 2 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 61
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A L NEMR P++CT+T L++ + EG ++A ++F+ + + PD+
Sbjct: 62 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 121
Query: 295 YAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
YN L++ A L MH P+ +Y+I++D++ G
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 170
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 145 LLDSRC---IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L + RC +P Y +++ +C +GL+ A V EM G P V YN+ ++GL K
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A + M+ P T+T +I+ Y K AL+LF+ M + + +P+I T
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y L++ R+G ++A ++++ + I P+ Y+ L+ +A+ + M
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
+ G P+ +YN ++ Y R+G
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSG 205
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI Y + KA + +L+ R P TY L+ C G L+KA ++ +
Sbjct: 87 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 146
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + P+ V Y+ ID + G + A M P+ TY +I Y ++
Sbjct: 147 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 206
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
K +M +K P++ TY L++ + +E +A ++ ++ ++PDV YN
Sbjct: 207 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 266
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
L+ + + + G EPDR +Y M++ + AG
Sbjct: 267 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI+++ +K + A F +L E+++ +P TY ++K YC SG + K + ++M
Sbjct: 161 ILIDSHCEKGQVEDA-FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 219
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P + YN+ I G +K A ++ M+++ QP TY ++IN +
Sbjct: 220 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 279
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
A +F +M + +P+ TY +++N G +EA ++ +++ G PD
Sbjct: 280 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L +A VF +M++ G P V Y + ID K G
Sbjct: 506 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 565
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++QRM+ P T TY+++IN GKA A KLF EM C PN+ TY
Sbjct: 566 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 625
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
+++ A+ + A +++ +Q AG EPD Y+ +M EA + + M
Sbjct: 626 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 685
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 686 NWIPDEPVYGLLVDLWGKAG 705
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + ++ ++ C P TY L+ + +G L+ A +++ M+ G
Sbjct: 522 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 581
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A ++F M C P+ TY +M++L+ KA AL
Sbjct: 582 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 641
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
KL+ +M++ +P+ TY+ ++ G EEAE +F ++Q PD Y L++
Sbjct: 642 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 701
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGR 330
A++ M H G P+ + N ++ + R
Sbjct: 702 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 738
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + ++ M RD CQP+T TY +I+ YG+A+
Sbjct: 473 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 532
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ +FN+M+ CKP+ TY L++ A+ G + A ++++++Q G+ PD + Y+ +
Sbjct: 533 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 592
Query: 301 ME----------AYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
+ A++L M GC P+ +YNIM+D + + AG
Sbjct: 593 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 652
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 653 EPDKVTYSIVMEVLGH 668
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 134 LHKKAEF------TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
+H KA F Y + P TY++++ +G L A +F EM G P
Sbjct: 560 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 619
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ V YN +D K N Q A+++++ M+ +P TY++++ + G A +F
Sbjct: 620 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 679
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
EM+ P+ Y LV+ + + G E+A + ++ + AG+ P+V N+L+
Sbjct: 680 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 739
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVD--AYGRAGLHEGKC 338
EAY L+ M +G P +Y +++ GR+ L G C
Sbjct: 740 NKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC 783
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C P TY +++ + + + A ++R+M+
Sbjct: 591 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 650
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M++ P Y L+++L+GKA A
Sbjct: 651 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 710
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M +PN+ T +L++ F R EA E+ + + G+ P + Y L+
Sbjct: 711 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 768
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 77/144 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + + ++ A Y ++ ++ P + TY+++++ G LE+AEAVF EM++
Sbjct: 626 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 685
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN +KA + +Q M +P+ T +++ + + +K A
Sbjct: 686 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 745
Query: 244 LKLFNEMRSHKCKPNICTYTALVN 267
+L M + +P++ TYT L++
Sbjct: 746 YELLQNMLALGLRPSLQTYTLLLS 769
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 27/236 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E+ C TY LL AY + L +A +F M
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------------KRDCCQPSTETY 227
G PP+ + Y++ +DGL K G QKA E++ ++ D P+ TY
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I+ KA K A +L + M S+ C+PN Y AL++ F + G + A+E+F ++
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507
Query: 288 AGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G P V+ Y +L++ A +++S+M C P+ +Y M+D R G
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG 563
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + + A+ + M G P+ ++Y++ IDG K G A E+
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RM + P+ TYT +I+ K + +A+K+ ++M C PN+ TYTA+++ R
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
G C++A ++ ++ G P+V Y AL++ + +L +M GC P+ +
Sbjct: 562 IGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVT 621
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y ++++ AGL + S L E+ ++P
Sbjct: 622 YRVLINHCCAAGLLDEAHSL-LSEMKQTYWP 651
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY+ ++ C + +EKA +F+EM+ G+ P Y ID K G ++A
Sbjct: 285 VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARS 344
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F M+ C + TYT +++ Y KA + A +FN M C PN TY+ALV+
Sbjct: 345 WFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLC 404
Query: 271 REGLCEEAEEIFEQLQGA----------------GIEPDVYAYNALME----AYRLISRM 310
+ G ++A E++ +L G I P+V Y AL++ A++++
Sbjct: 405 KAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 464
Query: 311 HM-------GCEPDRASYNIMVDAYGRAG---------LHEGKCSY 340
+ GCEP+ Y+ ++D + + G L KC Y
Sbjct: 465 ELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGY 510
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 144 ELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD+ C P Y L+ +C G ++ A+ VF M K G P+ Y S ID +
Sbjct: 465 ELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAM 524
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K A+++ +M C P+ TYT MI+ + + ALKL + M C PN+
Sbjct: 525 FKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNV 584
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TYTAL++ + G + + ++F Q+ G P+ Y L+ EA+ L+S
Sbjct: 585 VTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 644
Query: 310 M 310
M
Sbjct: 645 M 645
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ +L + +PT TY L+ A L+ A V +M +
Sbjct: 485 LIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESS 544
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDGL + G QKA+++ M+ C P+ TYT +I+ GK+ K ++L
Sbjct: 545 CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSL 604
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF +M + C PN TY L+N GL +EA + +++ + Y ++++ +
Sbjct: 605 QLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF 664
Query: 305 --RLISRMHM-------GCEPDRASYNIMVDAYGRAGLHE 335
+ I+ + + G P Y +++D + +AG E
Sbjct: 665 SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLE 704
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L S C+ + A + C G + A + + M G P Y+ I
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + +KA +FQ MK P TYT++I+ + KA A F+EMRS C
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSA 356
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + +A +IF ++ AG P+ Y+AL++ + CE
Sbjct: 357 NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 52/246 (21%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG-- 202
++ C P + L+ +YC + A + + M G PP V YN +I + G
Sbjct: 168 MMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEE 227
Query: 203 ---------------------------------------GNPQKAVEIFQRMKRDCCQPS 223
G A +I + M P
Sbjct: 228 LPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPD 287
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
T TY+ +I +A K A LF EM+S P++ TYT L+++F + GL E+A F+
Sbjct: 288 TSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFD 347
Query: 284 QLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+++ G +V Y AL+ AY + +RM GC P+ +Y+ +VD +AG
Sbjct: 348 EMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAG 407
Query: 333 LHEGKC 338
+ C
Sbjct: 408 EIQKAC 413
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 119/285 (41%), Gaps = 47/285 (16%)
Query: 74 QREVDSNTIWDAF--DSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSIL------ 124
+ VD+ + DA + P H +D LI+ ++ +++ + + MS L
Sbjct: 458 HKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTY 517
Query: 125 --LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI+A + A ++++S C P TY ++ C G +KA + M +
Sbjct: 518 TSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEE 577
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN---------- 232
G P+ V Y + IDGL K G ++++F +M C P+ TY ++IN
Sbjct: 578 KGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDE 637
Query: 233 -----------------------LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ G + K +L L E+ SH P Y L++ F
Sbjct: 638 AHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNF 697
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYA---YNALMEAYRLISRMH 311
++ G EEA E+ +++ ++ + Y +L++A L S++
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLE 742
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
EL D P+ TY L++ +G ++ V +EM + G + L K G
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 204 NPQKAVEIFQR--MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+ + +R K D T T MI+ +AS A+ + MR + C PN+ T
Sbjct: 90 RWSDALVMIEREDFKLD-----TVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
Y L+ F ++ + I + G P+ +N+L+ AY+L+ RM
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204
Query: 311 HMGCEPDRASYNIMV 325
GC P +YNI +
Sbjct: 205 DCGCPPGYVAYNIFI 219
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 79/221 (35%), Gaps = 52/221 (23%)
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+ L ++A + MR P+ V Y + + G LK I M ++ C P+
Sbjct: 120 ASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSL 179
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA------------------ 268
+ +++ Y A A KL M C P Y + +
Sbjct: 180 FNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEK 239
Query: 269 -------------------FAR----EGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
FAR G + A +I + + G G PD Y+ ++
Sbjct: 240 VYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLC 299
Query: 302 ------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A+ L M +G PD +Y I++D++ +AGL E
Sbjct: 300 EAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIE 340
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
LHK+ +EL S I ++D Y L++A C++ LEKA ++ E+ + G+ P V+
Sbjct: 709 LHKE----MMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFV 764
Query: 194 SYIDGLLKGGNPQKAVEI 211
I GL+K +A+++
Sbjct: 765 CLIKGLIKVNKWNEALQL 782
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 14/246 (5%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD+ V K P + + L++E + L+ F Y+ + +S C P E T
Sbjct: 421 DDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYM-MKESNCEPDERT 479
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ +C G L+ A + F EM K G+ P+ Y + IDG K G A+ +F+RM+
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ C S ETY +I+ K ++ A K +M +PN TYT+L+N +
Sbjct: 540 ENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATN 599
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVD 326
A +IF +++ P+ + Y +L+ A RL GCEP +Y+ +V
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN---GCEPTIDTYSTLVS 656
Query: 327 AYGRAG 332
R G
Sbjct: 657 GLCREG 662
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 14/223 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G+ + A+ Y ++ S P+ T+ ++ C G +++A VF ++ ++
Sbjct: 168 LLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD 227
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P A Y S I G + KA E+F RM +D C P++ TY+ +IN + A+
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM +P + TYT +++ G ++A + + G P V Y A++
Sbjct: 288 DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAY---GRAGL 333
+M + G P+ +YN +++ GR G+
Sbjct: 348 FRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGI 390
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY + + + C G ++ A + R M K G PS Y + I GL + G + A+ +
Sbjct: 300 PTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGM 359
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ +M ++ P+T TY +IN + +ALK+F+ M H N TY ++
Sbjct: 360 YHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFG 419
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
E+A +F ++ G P V YN L+ A R + M CEPD +
Sbjct: 420 MDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERT 479
Query: 321 YNIMVDAYGRAGLHEGKCSY 340
Y ++ + + G + S+
Sbjct: 480 YCELISGFCKGGKLDSATSF 499
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + ++ C P TY+ L+ C G + +A + EM + G+ P+ Y I
Sbjct: 250 KAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPI 309
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
L G A+ + + M + C PS +TYT +I+ +A K +A+ ++++M
Sbjct: 310 SSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLV 369
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
PN TY AL+N EG A +IF+ ++G G + YN +++
Sbjct: 370 PNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKG 416
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++K +EKA VF +M K G P+ V YN+ I LK G A M
Sbjct: 409 TYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMM 468
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K C+P TY +I+ + K K A F EM PN TYTA+++ + +EG
Sbjct: 469 KESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKI 528
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A +FE+++ G + YNA++ EA + ++M G +P+ +Y +
Sbjct: 529 DVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSL 588
Query: 325 VDA 327
++
Sbjct: 589 ING 591
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 11/201 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +P TY L+ C G A +F M +G +A YN I GL
Sbjct: 360 YHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFG 419
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ +KA+ +F +M +D P+ TY +I K A + M+ C+P+ T
Sbjct: 420 MDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERT 479
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM- 310
Y L++ F + G + A F ++ GI P+ + Y A+++ Y L RM
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539
Query: 311 HMGCEPDRASYNIMVDAYGRA 331
GC +YN ++ +
Sbjct: 540 ENGCSASIETYNAIISGLSKG 560
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 21/205 (10%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ C+P TY L+ C G ++ AE + + G P+ Y++ + GL +
Sbjct: 605 FHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCR 660
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A ++ + MK PS E Y ++ + K+ K AL++FN M +P++
Sbjct: 661 EGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFI 720
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA--------------YRLI 307
Y L+ A EEA IF+ L D+ + L++ Y +
Sbjct: 721 YKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLME 780
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAG 332
SR C P +Y I+ + G
Sbjct: 781 SR---NCTPSLHTYIILARELSKVG 802
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + A +F EM K P+A Y S I GL + G V+
Sbjct: 580 PNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK----VDA 635
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+R+ + C+P+ +TY+ +++ + +S A +L M+ P++ Y +L+ A +
Sbjct: 636 AERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCK 695
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
+ A EIF + G +P ++ Y L+ A +SR
Sbjct: 696 SLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSR 733
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 46/190 (24%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKSFM------ 242
+N+ + L K A ++ ++ +PS T+ MIN+ GK ++ +
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224
Query: 243 --------------------------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
A ++F+ M C PN TY+ L+N EG
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA ++ E++ GIEP VY Y + +A L+ M GC P +Y ++
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344
Query: 326 DAYGRAGLHE 335
RAG E
Sbjct: 345 SGLFRAGKME 354
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + Y LL A+C S ++ A +F M G P +Y I L ++A+ I
Sbjct: 681 PSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNI 740
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ + + +T++++ + S + +K M S C P++ TY L ++
Sbjct: 741 FQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSK 800
Query: 272 EGLCEEAEEIFEQLQ 286
G ++I +L+
Sbjct: 801 VGKSIGTDQIGNRLR 815
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ ++ Y G E+A +++ +M++ G+ P V YN+ ID K G A+
Sbjct: 374 PNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIA 433
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+R + TY +I+ YGK K A LF++M+ PN+ TY+AL++++++
Sbjct: 434 CKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSK 493
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G+ ++ +F + + AG++PDV Y++L+ +A L+ M G +P+ +
Sbjct: 494 AGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVT 553
Query: 321 YNIMVDAYGRAG 332
YN ++DAYGR G
Sbjct: 554 YNSLIDAYGRYG 565
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
++ AYG+ ++A + + + C P TY ++ A G+ L++A +F EM+K
Sbjct: 241 MVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKE 300
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + +NS I +GG + + +F M+R + T+ +I+ K + +A
Sbjct: 301 GVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELA 360
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ MR PN+ TY+ +++ + + G EEA ++ ++ +G+ PD +YN L++
Sbjct: 361 ASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDI 420
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
Y + R +G + D +YN ++DAYG+ G
Sbjct: 421 YAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQG 460
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + K+A + E+ P T+ L+ GL E ++ VF EM++
Sbjct: 276 IIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRR 335
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ +N+ ID + KGG + A I M+ P+ TY+ MI+ YGK A
Sbjct: 336 GIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEA 395
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L+++M+ +P+ +Y L++ +A+ G ++A + ++ G++ DV YNAL++A
Sbjct: 396 ISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDA 455
Query: 304 YR----------LISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
Y L +M G P+ +Y+ ++D+Y +AG+H+
Sbjct: 456 YGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQ 498
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQR 214
Y+ ++ AY SG +A VF+ M+K G P+ + YN+ ID KGG + ++A++IF
Sbjct: 237 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDE 296
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M+++ +P T+ +I + + + ++F EM+ + +I T+ L++A + G
Sbjct: 297 MQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQ 356
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRASYNI 323
E A I ++G I P+V Y+ +++ Y IS H G PDR SYN
Sbjct: 357 MELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNT 416
Query: 324 MVDAYGRAG 332
++D Y + G
Sbjct: 417 LIDIYAKLG 425
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 96/180 (53%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ YG+ ++A Y ++ +S P +Y L+ Y G + A ++M + G
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V YN+ ID K G + A +F +MK + P+ TY+ +I+ Y KA
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F E + KP++ Y++L+++ + GL E+A + +++ AGI+P++ YN+L++AY
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 561
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 103/192 (53%), Gaps = 13/192 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ A C G +E A ++ MR + P+ V Y++ IDG K G ++A+ ++ M
Sbjct: 343 TFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDM 402
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P +Y +I++Y K + AL +M K ++ TY AL++A+ ++G
Sbjct: 403 KESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKY 462
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM------------GCEPDRASYNI 323
++A +F++++G G+ P+V Y+AL+++Y + MH G +PD Y+
Sbjct: 463 KDAACLFDKMKGEGLVPNVLTYSALIDSYSK-AGMHQDVSNVFTEFKRAGLKPDVVLYSS 521
Query: 324 MVDAYGRAGLHE 335
++D+ + GL E
Sbjct: 522 LIDSCCKCGLVE 533
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G +E A VF +K G + Y++ + + G ++A+++FQ MK+ C+P+ TY
Sbjct: 214 GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITY 273
Query: 228 TLMINLYGKASKSF-MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+I+ GK AL +F+EM+ +P+ T+ +L+ +R GL E+++ +F ++Q
Sbjct: 274 NTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQ 333
Query: 287 GAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMVDAYGRAGLHE 335
GIE D++ +N L++A +M + P+ +Y+ M+D YG+ G E
Sbjct: 334 RRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFE 393
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 58/266 (21%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG++ +K A + ++ +P TY+ L+ +Y +G+ + VF E ++ G
Sbjct: 452 LIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAG 511
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK-------- 236
L P V+Y+S ID K G + AV + Q M + QP+ TY +I+ YG+
Sbjct: 512 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLE 571
Query: 237 ASKSFM---------------------------------ALKLFNEMRSHKCKPNICTYT 263
A K+ M A+ +F+EM+ KPN+ T++
Sbjct: 572 AVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFS 631
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY--AYNALM--------EAYRL---ISRM 310
A++NA +R +EA + EQ++ + VY A+ LM EA RL ISRM
Sbjct: 632 AILNACSRCASLQEASVLLEQMR--FFDGWVYGIAHGLLMGLREQVWVEAQRLFDEISRM 689
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHEG 336
A YN + D G +G
Sbjct: 690 DYATGA--AFYNALTDVLWHFGQRQG 713
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
++MI+ G+ K +AL +FN + N+ Y+A+V+A+ R G C EA ++F+ ++
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263
Query: 288 AGIEPDVYAYNALM-----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
AG +P++ YN ++ +A + M G EPDR ++N ++ R GL E
Sbjct: 264 AGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWE 323
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 89 LPPTHATWDDLI---------NVSVQL---RLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
+PP T+ LI + ++QL LN++ P ++ LI+ ++
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT---LIDGMCRQGDLD 453
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + ++ P TY++L+ ++C G +E A EM G+ P+ + YNS I
Sbjct: 454 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G + GN K + Q+M + P TY +I+ Y K K A KL N M K +
Sbjct: 514 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 573
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P++ TY L+N F+ G +EA IFE++ GIEPD Y Y +++ +
Sbjct: 574 PDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 621
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +LK C SG+ +KA VF+EM +G+ P + I G + G ++A++I
Sbjct: 224 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 283
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M+ +P +++ +I L+ + K A+ EMR P+ YT ++ F R
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 343
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPDRAS 320
GL +A + +++ G G PDV YN L++A L++ M G PD +
Sbjct: 344 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 403
Query: 321 YNIMVDAY 328
+ ++ Y
Sbjct: 404 FTTLIHGY 411
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + ++A Y E+ P +++ L+ + G ++ A A REMR +
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V+Y I G + G A+ + M C P TY ++N K + A
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L NEMR P++CT+T L++ + EG ++A ++F+ + + PD+ YN L++
Sbjct: 386 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 445
Query: 303 ---------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
A L MH P+ +Y+I++D++ G
Sbjct: 446 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E+ + P T+ L+ YC+ G L+KA +F M L P V YN+ ID
Sbjct: 385 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 444
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G+ + G+ KA +++ M P+ TY+++I+ + + + A +EM + P
Sbjct: 445 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 504
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---- 313
NI TY +++ + R G + ++ +++ + PD+ YN L+ Y +MH
Sbjct: 505 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564
Query: 314 -------CEPDRASYNIMVDAYGRAG 332
+PD +YN++++ + G
Sbjct: 565 NMMEKEKVQPDVVTYNMLINGFSVHG 590
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I + + L A E++ C+P TY LL C L AE + EM
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G+PP + + I G G KA+++F M +P TY +I+ +
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A L+++M S + PN TY+ L+++ +G E+A +++ GI P++ YN++
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512
Query: 301 MEAY----------RLISRMHMG-CEPDRASYNIMVDAY 328
++ Y + + +M + PD +YN ++ Y
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 146 LDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ RC+ P T+ +++ A +G E A A+ M GL P V YNS + GL + G
Sbjct: 182 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 241
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
KA E+F+ M P ++T++I + + + ALK++ EMR KP++ +++
Sbjct: 242 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 301
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L+ FAR G + A +++ G+ PD Y ++ +A R+ M G
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 314 CEPDRASYNIMVDA 327
C PD +YN +++
Sbjct: 362 CLPDVVTYNTLLNG 375
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI Y + KA + +L+ R P TY L+ C G L+KA ++ +
Sbjct: 402 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 461
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + P+ V Y+ ID + G + A M P+ TY +I Y ++
Sbjct: 462 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 521
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
K +M +K P++ TY L++ + +E +A ++ ++ ++PDV YN
Sbjct: 522 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
L+ + + + G EPDR +Y M++ + AG
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 625
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ + + KA + E+ D P ++ +L+ +C G +E+A +++EMR G
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V ++ I + G A+ + M+ P YT++I + +A AL
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +EM C P++ TY L+N +E +AE + +++ G+ PD+ + L+ Y
Sbjct: 352 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 411
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ ++ + PD +YN ++D R G
Sbjct: 412 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 450
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +++ YC + +K +AV EM K + P V +N +D + G+ + A+ + M
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P TY ++ ++ A ++F EM P++ ++T L+ F R G
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
EEA +I+++++ GI+PD+ +++ L+ + +M G PD Y ++
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 325 VDAYGRAGL 333
+ + RAGL
Sbjct: 338 IGGFCRAGL 346
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI+++ +K + A F +L E+++ +P TY ++K YC SG + K + ++M
Sbjct: 476 ILIDSHCEKGQVEDA-FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 534
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P + YN+ I G +K A ++ M+++ QP TY ++IN +
Sbjct: 535 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 594
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
A +F +M + +P+ TY +++N G +EA ++ +++ G PD
Sbjct: 595 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI Y Q ++A + +LD R LL A +G A +R +
Sbjct: 91 LLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSS 150
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ N + K K + M++ C P T+ +M++ +A + A
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L + M S KP I TY +++ R G+ ++A E+F+++ G+ PDV ++ L+
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA ++ M H G +PD S++ ++ + R G + +Y
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL S P + LL++ Y S +A FR + + +P A N+ + L + G
Sbjct: 77 LLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGW 136
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P A + ++ + + +T T +M++ Y KA + + +EM P++ T+
Sbjct: 137 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 196
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
+V+A R G E A + + + G++P + YN+++ +A+ + M G
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD S+ I++ + R G
Sbjct: 257 VAPDVRSFTILIGGFCRVG 275
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+ L + + ++ D+ C P TY L+ +C + KA EM+ G
Sbjct: 97 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 156
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y+++ID K G Q+A++ F M+R P+ TYT +I+ KA AL
Sbjct: 157 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 216
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL E+ K N+ TYTAL++ EG +EAEE+F + AG+ P+ Y AL+ +
Sbjct: 217 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 276
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++ C G LE A ++F +M++ G P V YNS IDG K G + + IF++M
Sbjct: 58 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K C P TY +IN + K + A + +EM+++ KPN+ TY+ ++AF +EG+
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIM 324
+EA + F ++ + P+ + Y +L+ EA +L+ + G + + +Y +
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237
Query: 325 VDAYGRAG 332
+D G
Sbjct: 238 LDGLCEEG 245
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 95/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I+A+ ++ + ++A ++++ P E TY L+ A C +G L +A + E+ + G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + +DGL + G ++A E+F+ M P+ ETYT +++ + KA + A
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM+ KP++ Y ++ E EEA+ + +++ +GI + Y LM+AY
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 346
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+LE+A F +MRK+ + P N+ + L K G + + F+ M + S TY
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+MI+ K MA LF +M+ P+I TY +L++ + GL +E IFEQ++ A
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 289 GIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
+PDV YNAL+ + RM G +P+ +Y+ +DA+ + G+
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A +L++ R P + LL G + + F++M G+ S YN
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID L K G+ + A +F +MK P TY +I+ +GK + +F +M+ C
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------- 304
P++ TY AL+N F + +A E +++ G++P+V Y+ ++A+
Sbjct: 123 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK 182
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + P+ +Y ++DA +AG
Sbjct: 183 FFVDMRRVALTPNEFTYTSLIDANCKAG 210
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 58/250 (23%)
Query: 139 EFTYLELLDSRCIP---------TED-----------TYALLLKAYCMSGLLEKAEAVFR 178
EFTY L+D+ C E+ TY LL C G +++AE VFR
Sbjct: 196 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 255
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
M G+ P+ Y + + G +K + A +I + MK C +P Y + L+G +
Sbjct: 256 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI--LWGLCN 313
Query: 239 KSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAR------------------EGLC--- 275
+S + A L E++ N YT L++A+ + +GLC
Sbjct: 314 ESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNN 373
Query: 276 --EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
E A+++F+++ G+ PD AY AL+ EA L RM +G E D +Y
Sbjct: 374 CFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYT 433
Query: 323 IMVDAYGRAG 332
++ +G
Sbjct: 434 ALIWGLSHSG 443
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 88 SLPPTHATWDDLI-------NVSVQLRLNKK--WDPIVLMSCVSILLIEAYGQKSLHKKA 138
+L P T+ LI N++ L+L ++ I L L++ ++ K+A
Sbjct: 191 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 250
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
E + +L++ P ++TY L+ + + +E A+ + +EM++ + P ++Y + + G
Sbjct: 251 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 310
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL-------------- 244
L ++A + +K + YT +++ Y K+ ++ AL
Sbjct: 311 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLC 370
Query: 245 ---------KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
KLF+EM P+ YTAL++ + G +EA + +++ G+E D++
Sbjct: 371 KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLH 430
Query: 296 AYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
AY AL+ +A L+ M G PD Y ++ Y
Sbjct: 431 AYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 474
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L+ + +CI P Y +L C LE+A+ + E+++ G+ +AV+Y + +D K
Sbjct: 289 LKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFK 348
Query: 202 GGNPQKAVEIFQRM--------KRDCCQ---------------PSTETYTLMINLYGKAS 238
G +A+ + + M K +C + P YT +I+ K
Sbjct: 349 SGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 408
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
AL L + M + ++ YTAL+ + G ++A + +++ G G+ PD Y
Sbjct: 409 NLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYM 468
Query: 299 ALMEAYRLISRMHMGCE 315
L++ Y + ++ E
Sbjct: 469 CLIKKYYALGKVDEALE 485
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL--------LLKAYCMSGLLEKAEA 175
LLI + ++ A Y L+D+ + T AL L+ C + E A+
Sbjct: 322 LLIGEIKESGINTNA-VIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKK 380
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+F EM G+ P + Y + IDG +K GN Q+A+ + RM + YT +I
Sbjct: 381 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 440
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+ + A L +EM P+ Y L+ + G +EA E+ ++ G+
Sbjct: 441 HSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 91 PTHATWDDLINVSVQLRLNKK----WDPIVLMSCVS-----ILLIEAYGQKSLHKKAEFT 141
PT T++ LIN V+ R +K D + L + +++ Y KA F
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA-FE 680
Query: 142 YLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y L + + + TY LLKA C SG ++ A AV +EM +P ++ VYN IDG
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ +A ++ Q+MK++ +P TYT I+ KA A + EM + KPNI
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 800
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
TYT L+ +AR L E+A +E+++ GI+PD Y+ L+ + L+SR
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS--LLSR 847
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A+C + +E+AEA+ REM + G+ +Y++ +DG + +K + +F+R+K
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ TY +INLY K K AL++ M+ K N+ TY+ ++N F +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A +FE + G++PDV YN ++ A+
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAF 564
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++++ + A AVF +M K G+ P ++YN+ I GN +A++ + M
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ +P+T T+ +I+ Y K+ +L++F+ MR C P + T+ L+N +
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A EI +++ AG+ + + Y +M+ Y
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
T E+ R PT T+ ++ Y SG + ++ VF MR+ G P+ +N I+GL+
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKASKSFM------------ 242
+ +KAVEI M + TYT ++ Y GKA + F
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 243 -----------------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
AL + EM + N Y L++ +AR G EA ++ +Q+
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
+ G++PD++ Y + + A + I M +G +P+ +Y ++ + RA L
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 815
Query: 335 EGKCS 339
E S
Sbjct: 816 EKALS 820
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++K Y G + +A F MR G+ P++ +Y S I G + +A+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + KA + A F+E + N Y ++ A +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRAS 320
E AE + +++ GI+ + Y+ +M+ Y +++ G P +
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV--ELSVKH 349
Y +++ Y + G S V E VKH
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q ++AE E+ + Y ++ Y M +K VF+ +++ G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I+ K G KA+E+ + MK + + + +TY++MIN + K A
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M KP++ Y +++AF G + A + +++Q P + ++ Y
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 305 -------RLISRMHM----GCEPDRASYNIMVDA 327
R + M GC P ++N +++
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+++ YG++ +A T+ + PT Y L+ AY + +++A + R+M++
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S V Y+ + G K G+ + A F KR + Y +I + + A
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM I Y +++ + ++ +F++L+ G P V Y L+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 304 YRLISRMHMGCEPDRA-----------SYNIMVDAY 328
Y + ++ E R +Y++M++ +
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G N Q + F+++ + PS + LM+ YG+ A + F MR+ P
Sbjct: 291 GDNWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
YT+L++A+A +EA +++ GIE + Y+ ++ +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 29/269 (10%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSL 134
L P+ T++ +++V ++ + WD I+ + +C ++L A G++ L
Sbjct: 253 LSPSLVTYNVMLDVYG--KMGRSWDKILELLDEMRSRGLDFDEFTCSTVL--SACGREGL 308
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A + L P TY LL + +G+ +A +V EM + PP AV YN
Sbjct: 309 IDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ ++ G ++ + M P+ TYT +IN YG+ AL++F++M
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------AYRLIS 308
C PN+ TY A++ ++ L EE +I ++ G P+ +N ++ ++ ++
Sbjct: 429 CVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVN 488
Query: 309 RM-----HMGCEPDRASYNIMVDAYGRAG 332
++ + G EPDR ++N ++ AYGR G
Sbjct: 489 QVFREMKNCGFEPDRDTFNTLISAYGRCG 517
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +G+ + +A E+ ++ C P TY ++ AY +G E+ V M G
Sbjct: 334 LLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKG 393
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+AV Y + I+ + G+ KA+E+F +M C P+ TY ++ + GK S S +
Sbjct: 394 IMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMM 453
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ M+ + C PN T+ ++ ++G+ + ++F +++ G EPD +N L+ AY
Sbjct: 454 KILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAY 513
Query: 305 ------RLISRMH-----MGCEPDRASYNIMVDAYGRAG 332
++MH G P +YN +++A R G
Sbjct: 514 GRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRG 552
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEM 250
Y + + + G +A+EIF+RM PS TY +M+++YGK +S+ L+L +EM
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEM 284
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
RS + T + +++A REGL +EA E F L+ G +P YNAL+
Sbjct: 285 RSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIF 344
Query: 302 -EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
EA ++S M C PD +YN +V AY RAG HE
Sbjct: 345 SEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHE 380
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 46/252 (18%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G+K +HK + E+ + P DT+ L+ AY G A + EM K G P
Sbjct: 479 GKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCI 538
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---------- 239
YN+ ++ L + G+ + A + M+ +PS +Y+LM++ Y K
Sbjct: 539 NTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKS 598
Query: 240 --------SFMALKL-----------------FNEMRSHKCKPNICTYTALVNAFAREGL 274
S+M L+ F ++ H KP++ ++++ FA+ +
Sbjct: 599 IYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNM 658
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY---------RLISRMHM--GCEPDRASYNI 323
+ A E+ + AG++PD+ +N+LM+ Y + RM G +PD SYN
Sbjct: 659 YDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNT 718
Query: 324 MVDAYGRAGLHE 335
++ + R GL +
Sbjct: 719 VIKGFCRKGLMQ 730
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 90 PPTHATWDDLINVSVQLRLNKKWDPIV-LMSCVSIL--------LIEAYGQKSLHKKAEF 140
PP T+++++ V+ +++ ++ M+ I+ +I AYG+ KA
Sbjct: 360 PPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALE 419
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ ++++ C+P TY +L L E+ + M+ G P+ + +N+ +
Sbjct: 420 MFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCG 479
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G + ++F+ MK +P +T+ +I+ YG+ + A K+ EM P I
Sbjct: 480 KKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCIN 539
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY AL+NA AR G + AE + ++ G P +Y+ ++ +Y
Sbjct: 540 TYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSY 583
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 110/253 (43%), Gaps = 46/253 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG------LLEKA----- 173
L+ A ++ K AE L++ + P+E +Y+L++ +Y G ++EK+
Sbjct: 544 LLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGD 603
Query: 174 ------------------------EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
E F+ ++K+G P V+ NS + K +A
Sbjct: 604 IFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAH 663
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ + + QP T+ ++++Y + + A ++ +++ KP++ +Y ++ F
Sbjct: 664 EMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGF 723
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDR 318
R+GL +E I ++ G+ P ++ YN + Y +IS M + C P+
Sbjct: 724 CRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNE 783
Query: 319 ASYNIMVDAYGRA 331
+Y I+ D Y +A
Sbjct: 784 LTYKIVADGYCKA 796
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 8/194 (4%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
L+ C S+L I + + +++ +A + D+ P T+ L+ Y G KAE V
Sbjct: 643 LVLCNSMLSI--FAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEV 700
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
R ++ G P V YN+ I G + G Q+ + I M P TY I+ Y
Sbjct: 701 LRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAA 760
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ + M H C+PN TY + + + + +EA + +++ DV
Sbjct: 761 QGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIK------DVDD 814
Query: 297 YNALMEAYRLISRM 310
RL+SR+
Sbjct: 815 TFGDQSVRRLVSRV 828
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ--RMKRDCCQPSTETYT--LM 230
A F + KY L ++ S + L GN +KA+ +F+ + + + LM
Sbjct: 136 ASFFDSSKYELLQVDLI--SLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELM 193
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+ + G+ S+ +A KLF+ + ++ YT +++A++R G A EIFE++ +G+
Sbjct: 194 VRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGL 253
Query: 291 EPDVYAYNALMEAY-----------RLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
P + YN +++ Y L+ M G + D + + ++ A GR GL
Sbjct: 254 SPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGL 308
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 89 LPPTHATWDDLI---------NVSVQL---RLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
+PP T+ LI + ++QL LN++ P ++ LI+ ++
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT---LIDGMCRQGDLD 392
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + ++ P TY++L+ ++C G +E A EM G+ P+ + YNS I
Sbjct: 393 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G + GN K + Q+M + P TY +I+ Y K K A KL N M K +
Sbjct: 453 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 512
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P++ TY L+N F+ G +EA IFE++ GIEPD Y Y +++ +
Sbjct: 513 PDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 560
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +LK C SG+ +KA VF+EM +G+ P + I G + G ++A++I
Sbjct: 163 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 222
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M+ +P +++ +I L+ + K A+ EMR P+ YT ++ F R
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 282
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPDRAS 320
GL +A + +++ G G PDV YN L++A L++ M G PD +
Sbjct: 283 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 342
Query: 321 YNIMVDAY 328
+ ++ Y
Sbjct: 343 FTTLIHGY 350
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + ++A Y E+ P +++ L+ + G ++ A A REMR +
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V+Y I G + G A+ + M C P TY ++N K + A
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L NEMR P++CT+T L++ + EG ++A ++F+ + + PD+ YN L++
Sbjct: 325 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 384
Query: 303 ---------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
A L MH P+ +Y+I++D++ G
Sbjct: 385 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E+ + P T+ L+ YC+ G L+KA +F M L P V YN+ ID
Sbjct: 324 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 383
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G+ + G+ KA +++ M P+ TY+++I+ + + + A +EM + P
Sbjct: 384 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 443
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---- 313
NI TY +++ + R G + ++ +++ + PD+ YN L+ Y +MH
Sbjct: 444 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503
Query: 314 -------CEPDRASYNIMVDAYGRAG 332
+PD +YN++++ + G
Sbjct: 504 NMMEKEKVQPDVVTYNMLINGFSVHG 529
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I + + L A E++ C+P TY LL C L AE + EM
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G+PP + + I G G KA+++F M +P TY +I+ +
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A L+++M S + PN TY+ L+++ +G E+A +++ GI P++ YN++
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451
Query: 301 MEAY----------RLISRMHMG-CEPDRASYNIMVDAY 328
++ Y + + +M + PD +YN ++ Y
Sbjct: 452 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 490
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 146 LDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ RC+ P T+ +++ A +G E A A+ M GL P V YNS + GL + G
Sbjct: 121 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 180
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
KA E+F+ M P ++T++I + + + ALK++ EMR KP++ +++
Sbjct: 181 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 240
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L+ FAR G + A +++ G+ PD Y ++ +A R+ M G
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 314 CEPDRASYNIMVDA 327
C PD +YN +++
Sbjct: 301 CLPDVVTYNTLLNG 314
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI Y + KA + +L+ R P TY L+ C G L+KA ++ +
Sbjct: 341 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 400
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + P+ V Y+ ID + G + A M P+ TY +I Y ++
Sbjct: 401 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 460
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
K +M +K P++ TY L++ + +E +A ++ ++ ++PDV YN
Sbjct: 461 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 520
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
L+ + + + G EPDR +Y M++ + AG
Sbjct: 521 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 564
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ + + KA + E+ D P ++ +L+ +C G +E+A +++EMR G
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V ++ I + G A+ + M+ P YT++I + +A AL
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +EM C P++ TY L+N +E +AE + +++ G+ PD+ + L+ Y
Sbjct: 291 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 350
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ ++ + PD +YN ++D R G
Sbjct: 351 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 389
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +++ YC + +K +AV EM K + P V +N +D + G+ + A+ + M
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P TY ++ ++ A ++F EM P++ ++T L+ F R G
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
EEA +I+++++ GI+PD+ +++ L+ + +M G PD Y ++
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 325 VDAYGRAGL 333
+ + RAGL
Sbjct: 277 IGGFCRAGL 285
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 11/228 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI Y Q ++A + +LD R LL A +G A +R +
Sbjct: 30 LLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSS 89
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ N + K K + M++ C P T+ +M++ +A + A
Sbjct: 90 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L + M S KP I TY +++ R G+ ++A E+F+++ G+ PDV ++ L+
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA ++ M H G +PD S++ ++ + R G + +Y
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI+++ +K + A F +L E+++ +P TY ++K YC SG + K + ++M
Sbjct: 415 ILIDSHCEKGQVEDA-FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 473
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P + YN+ I G +K A ++ M+++ QP TY ++IN +
Sbjct: 474 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 533
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
A +F +M + +P+ TY +++N G +EA ++ +++ G E
Sbjct: 534 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL S P + LL++ Y S +A FR + + +P A N+ + L + G
Sbjct: 16 LLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGW 75
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P A + ++ + + +T T +M++ Y KA + + +EM P++ T+
Sbjct: 76 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 135
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
+V+A R G E A + + + G++P + YN+++ +A+ + M G
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD S+ I++ + R G
Sbjct: 196 VAPDVRSFTILIGGFCRVG 214
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + KA+ + ++ C P DTY L+K +C S +E +FREM G
Sbjct: 295 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V Y + I GL G+ A ++F++M D P TY+++++ K AL
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F+ M+ + K +I YT ++ + G ++ ++F L G++P+V YN ++
Sbjct: 415 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EAY L+ +M G PD +YN ++ A+ R G
Sbjct: 475 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +++ C G ++ A + +M + V++N+ ID L K + A+
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204
Query: 210 EIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+F+ M+ +P+ TY+ +I+ YG+ S A +L ++M K PN+ T+ AL+
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALI 261
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CE 315
+AF +EG EAE++ + + I+PD++ YN+L+ + + R+ C
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321
Query: 316 PDRASYNIMVDAYGRA 331
PD +YN ++ + ++
Sbjct: 322 PDLDTYNTLIKGFCKS 337
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T + LL YC + A A+ +M + G P + + + I GL +AV +
Sbjct: 77 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + CQP+ TY +++N K +A L N+M + K + ++ + ++++ +
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F++++ GI P+V Y++L+ +A +L+S M P+ +
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 321 YNIMVDAYGRAG 332
+N ++DA+ + G
Sbjct: 257 FNALIDAFVKEG 268
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ + P T+ L+ A+ G +AE + +M K + P YNS I+G
Sbjct: 244 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 303
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++F+ M C P +TY +I + K+ + +LF EM + TYT
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 363
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ +G C+ A+++F+Q+ G+ PD+ Y+ L++
Sbjct: 364 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ ++ + C ++ A +F+EM G+ P+ V Y+S I L G A ++ M
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T+ +I+ + K K A KL ++M P+I TY +L+N F +
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
+A+++FE + PD+ YN L++ + L M H G D +Y ++
Sbjct: 307 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 366
Query: 326 DAYGRAGLHEGKCS 339
H+G C
Sbjct: 367 QGL----FHDGDCD 376
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN-- 232
A+ +M K G PS V +S ++G G AV + +M +P T T+T +I+
Sbjct: 65 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 124
Query: 233 -LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
L+ KAS+ A+ L + M C+PN+ TY +VN + G + A + +++ A IE
Sbjct: 125 FLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 181
Query: 292 PDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVD---AYGR 330
DV +N ++ +A L M G P+ +Y+ ++ +YGR
Sbjct: 182 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 234
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + +++ P TY++LL C +G LEKA VF M+K + +Y + I+
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 437
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKC 255
G+ K G ++F + +P+ TY MI+ G SK + A L +M+
Sbjct: 438 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS--GLCSKRLLQEAYALLKKMKEDGP 495
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
P+ TY L+ A R+G + E+ +++
Sbjct: 496 LPDSGTYNTLIRAHLRDGDKAASAELIREMR 526
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G ++ +F + G+ P+ V YN+ I GL Q+A + ++MK
Sbjct: 432 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
D P + TY +I + + + +L EMRS
Sbjct: 492 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASK--SFMALKLFNEMRSHKCKPNICTYTAL 265
A+ +F M + PS + +++ K K ++L L +M +P+I T ++L
Sbjct: 26 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSL 85
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGC 314
+N + +A + +Q+ G PD + L+ EA L+ RM GC
Sbjct: 86 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 145
Query: 315 EPDRASYNIMVDAYGRAG 332
+P+ +Y ++V+ + G
Sbjct: 146 QPNLVTYGVVVNGLCKRG 163
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ +G+ H+ A T+ EL S +P Y L+ A+ G++++A VF+E ++
Sbjct: 169 ILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRS 228
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
V++ + I K +A+ + + MK QP+ Y ++N + +A++ A
Sbjct: 229 FCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGA 288
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+KLF EM+ C+ TY ++N +++ G AEE+ +++ G +V AY+ L+
Sbjct: 289 IKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDM 348
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA RL S M GC+ + YN M+D YG+AG
Sbjct: 349 YGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAG 388
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ +S C E TY +L Y +G AE + +MR+ G + V Y++ ID K G
Sbjct: 294 EMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVG 353
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q+A +F MK+ C+ + Y M+++YGKA + A +L E++ K P+ TYT
Sbjct: 354 KLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYT 413
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPD---------VYA----YNALMEAYRLISRM 310
L+NA+ R G EE +FEQ + G++ D VY Y+ L E ++ +
Sbjct: 414 TLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPK- 472
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHE 335
G +PD +V+ Y G+ E
Sbjct: 473 -SGIQPDTRILKTVVEIYEDGGMCE 496
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P YAL++K +G + A+ F +M+ G PP V+YN I K G
Sbjct: 49 EMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRG 108
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +A++ F ++K + P + TY +++ K + EMR KP+ Y+
Sbjct: 109 NFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYS 168
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---------- 313
L++ F + G E+A F +LQ +G PD AYN L+ A+ + +
Sbjct: 169 ILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRS 228
Query: 314 -CEPDRASYNIMVDAYGRA 331
C D + M+ Y +A
Sbjct: 229 FCLDDPVIFYTMIQVYAKA 247
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG++ +A + +L D +P TY +L A G ++K +EMR+
Sbjct: 99 ILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREA 158
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V Y+ ID K G + A F+ ++ P + Y +I+ + K A
Sbjct: 159 GIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQA 218
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F E + C + + ++ +A+ + ++A + + ++ G++P+ Y +++ A
Sbjct: 219 TLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNA 278
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
+ +L M C ++Y M++ Y +AG H
Sbjct: 279 FMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFH 320
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
E + EM PP Y I + G Q A F +MK C P Y ++I
Sbjct: 44 EILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILE 103
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
YGK A+K F++++ P+ TY A+++A + G ++ E ++++ AGI+PD
Sbjct: 104 YGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPD 163
Query: 294 VYAYNALMEAYRLISR----------MHM-GCEPDRASYNIMVDAYGRAGL 333
AY+ L++ + R + M G PD +YN ++ A+ + G+
Sbjct: 164 QVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGM 214
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ ++A + + C Y +L Y +G + AE + E++
Sbjct: 345 LIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSK 404
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y + I+ + G ++ + +F++ + D + +MIN+YGKA +
Sbjct: 405 LVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLA 464
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+L M +P+ +V + G+CE A E+ ++ G
Sbjct: 465 ELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 204 NPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
N Q +VE ++ +K +D +P Y + + K L +EM C P+I Y
Sbjct: 3 NRQVSVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFY 62
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-- 310
++ G + A+ F +++ G PD+ YN L+ +A + S++
Sbjct: 63 ALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKD 122
Query: 311 ----------------------------------HMGCEPDRASYNIMVDAYGRAGLHEG 336
G +PD+ +Y+I++D +G+AG HE
Sbjct: 123 EGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHED 182
Query: 337 KCSYSLVELSVKHY 350
+ + EL + Y
Sbjct: 183 AAA-TFRELQMSGY 195
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ +C +G +EK + +F EM K G+ P+ V N+ + G+ + G AV
Sbjct: 415 CAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAV 474
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F +R + TYT +IN + + A++LFNEM C P+ Y L++ F
Sbjct: 475 NFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGF 534
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
++ G +A + +L+ GI PD YN L+ + ++ H G +PD
Sbjct: 535 SQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDT 594
Query: 319 ASYNIMVDAYGRAG 332
+YN ++ + G
Sbjct: 595 ITYNTLIAYASKNG 608
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 29/267 (10%)
Query: 107 RLNKKWDPIVLMSCVSILLIEAYGQK---SLHKKAEFTYLELLDSRCI-----PTEDTYA 158
+ N+ WD M + +L A L ++ F + L + + P T+
Sbjct: 285 KTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFG 344
Query: 159 LLLKAYCMSGLLEKAEAVFREMR--------KYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+L+ C ++ A V +M + P V+YN+ IDGL K G Q+ +
Sbjct: 345 ILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLG 404
Query: 211 IFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ +RM+ + C P T TY +I+ + KA + +LF+EM PN+ T LV
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
R G A F + Q G++ D Y AL+ A+ L + M GC PD
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDA 524
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVEL 345
Y ++ + +AG S+ L EL
Sbjct: 525 IVYYTLISGFSQAG-RMADASFVLAEL 550
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + +KA + E+L S C P Y L+ + +G + A V E++K G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ I G + + E+ + M+ +P T TY +I K A
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALME- 302
K+ +M P + TY A++NA+ G EA EIF+ ++ A + P+ YN L+
Sbjct: 615 KVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINS 674
Query: 303 ---------AYRLISRMHM-GCEPDRASYN 322
A L+ M + G P+ +YN
Sbjct: 675 LCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P Y L+ C G ++ + MR + G P + YN IDG K G +K E
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M ++ P+ T ++ + + A+ F E + K + TYTAL+NAF
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRA 319
E+A E+F ++ +G PD Y L+ + RM +G PD
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560
Query: 320 SYNIMVDAYGRA 331
YN ++ + R
Sbjct: 561 CYNTLIGGFCRT 572
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ A+C EKA +F EM K G P A+VY + I G + G A + +
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ +P T Y +I + + +K ++ EM KP+ TY L+ ++ G
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE------------PDRASYNI 323
+ A+++ ++ AG+ P V Y A++ AY L + E P+ YNI
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670
Query: 324 MVDAYGRAGLHEGKCSYSLVE 344
++++ + ++ K + SL+E
Sbjct: 671 LINSLCKN--NKVKSAVSLME 689
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + Q A F EL P Y L+ +C + + + +EM + G
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + YN+ I K G+ + A ++ ++M + P+ TY +IN Y A+
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649
Query: 245 KLFNEMRS-HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F +M++ K PN Y L+N+ + + A + E ++ G+ P+ YNA+ +
Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKG 709
Query: 304 YR----------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
R + RM C PD + I+ + G
Sbjct: 710 LRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVG 749
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 147 DSRCIPTEDT----YALLLKAYCMSGLLEKAEAVFREMR--KYGLPPSAVVYNSYIDGLL 200
DS C P + T ++ LLK LL + E V ++ ++G+ S+ I L
Sbjct: 222 DSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLC 281
Query: 201 KGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ + ++F M K S +L+ L + + + M +L +M +PN+
Sbjct: 282 RNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMN-ELMEKMVEMDIQPNV 340
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGA--------GIEPDVYAYNALM---------- 301
T+ L+N + ++A E+ E++ G +EPDV YN L+
Sbjct: 341 VTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQ 400
Query: 302 EAYRLISRM--HMGCEPDRASYNIMVDAYGRAG-LHEGK 337
E L+ RM GC PD +YN ++D + +AG + +GK
Sbjct: 401 EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGK 439
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
M+C LL+ A GQ H +A + E RC+P E TY L+ C +G L++A +
Sbjct: 1 MNCALNLLVRA-GQ---HGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELL 53
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EMR G+PP V+N I GL K G A+ F+ + C P T+ ++++ K+
Sbjct: 54 DEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKS 113
Query: 238 SKSFMALKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ A ++F M S +C PN+ TYT ++N ++G + A E+ + + G P+V
Sbjct: 114 GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVIT 173
Query: 297 YNALME----------AYRLISRM-HMGCEPDRASYNIMVDA 327
Y+ L+E + L+ M G +PD YN +++
Sbjct: 174 YSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ELLD + C P TY++L++ C +G +K + +EM + G P ++YN+ ++G
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K +A+E+ Q M R C P+ TY ++ L+ ++ + A +L M C P+
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---------------- 302
+ Y ++ R+ ++A+ + +Q+ A PDV Y+ +++
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
A ++ M GC P+ +Y ++++ RA
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 144 ELLDSRCIPTEDTYALLLKAYC------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+++ +RC+P TY+ ++ C LE A + M++ G PP+A Y I+
Sbjct: 301 QMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIE 360
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL + Q+A+ + +RM P +++++I K+ A K+F M +CKP
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N Y AL++ ++ G ++A +FE L P V YN+++ EA R++
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMV 479
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYPA 352
M H C PD ASY ++ G C S VE + + + A
Sbjct: 480 EGMIHKECFPDGASYGALI---------RGLCRVSCVEEAYELFQA 516
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S+C+P TY ++ C G L++A + M + G P+ + Y+ ++GL K G K
Sbjct: 130 SQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+ Q M R QP Y ++N K+ + AL+L M C P + TY +L+
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEP 316
F R + A + + + G PDV YN ++ +A L+ +M C P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 317 DRASYNIMVDA 327
D +Y+ ++D
Sbjct: 310 DVITYSTIIDG 320
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++IE + ++A ++DS +P ++++++ + C S L+ A +F M +
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V Y + IDGL KGG KAV +F+ M +P TY +++ + A
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGVATYNSVLDGLCGVGRIEEA 475
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+++ M +C P+ +Y AL+ R EEA E+F+ ++ G +V YN L+
Sbjct: 476 VRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+NL +A + A++LF R +C PN TY +L++ + G ++A E+ ++++ GI
Sbjct: 5 LNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61
Query: 291 EPDVYAYNALMEAYRLISRM--HMG---------CEPDRASYNIMVDAYGRAGLHE 335
P V +N +++ R +G C PD ++NI+VDA ++G E
Sbjct: 62 PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 10/209 (4%)
Query: 90 PPTHATWDDLINVSVQLR--------LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
PP T+ +I + R L + D V+ S ++ KS A +
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYK 408
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
++ R C P YA L+ G ++KA VF E+ P YNS +DGL
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLC 467
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G ++AV + + M C P +Y +I + S A +LF + + +
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAG 289
Y LVN ++ +A + +L AG
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|193848521|gb|ACF22711.1| PPR protein [Brachypodium distachyon]
Length = 292
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F MR+ G+ P V +N+
Sbjct: 10 QKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTL 69
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A+E+F+ M+ C P T TY +MINL G+ + + +EM+
Sbjct: 70 IDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGL 129
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PNI TYT LV+ + R G +EA E E ++ G++P Y+AL+ AY
Sbjct: 130 VPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAY 178
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 6/184 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ +G+ + A + + + P T+ L+ A+ G ++A +F EMR+
Sbjct: 33 VMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRES 92
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEI---FQRMKRDCCQPSTETYTLMINLYGKASKS 240
PP YN I+ L G ++ V + MK P+ TYT ++++YG++ +
Sbjct: 93 NCPPGTTTYNIMINLL---GEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRF 149
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A++ M++ KP+ Y ALVNA+A+ GL + A + + ++ G+E N+L
Sbjct: 150 KEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSL 209
Query: 301 MEAY 304
M A+
Sbjct: 210 MNAF 213
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G++ E E+ + +P TY L+ Y SG ++A M+
Sbjct: 103 IMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKAD 162
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS +Y++ ++ + G A+ + + M+ D + ST ++N +G+ + A
Sbjct: 163 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEA 222
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ + +P++ TYT L+ A R ++ I+E++ +G PD A L A
Sbjct: 223 FSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKARAMLRSA 282
Query: 304 YR 305
R
Sbjct: 283 LR 284
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G G+ QKA + + M QP Y +MI+ +GK + A+ FN MR +P
Sbjct: 2 GFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEP 61
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----EAYR------LI 307
++ T+ L++A + G + A E+FE+++ + P YN ++ E R ++
Sbjct: 62 DVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETML 121
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAG 332
S M G P+ +Y +VD YGR+G
Sbjct: 122 SEMKEQGLVPNIITYTTLVDVYGRSG 147
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEP 316
F G ++A + ++ +G++PD + YN +++ + +RM G EP
Sbjct: 2 GFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEP 61
Query: 317 DRASYNIMVDAYGRAGLHE 335
D ++N ++DA+ + G H+
Sbjct: 62 DVVTWNTLIDAHRKGGRHD 80
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIV---LMSCVS------ILLIEAYGQKSLHKKAEFT 141
PT T++ LIN V+ R +K I+ ++ VS +++ Y KA F
Sbjct: 620 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA-FE 678
Query: 142 YLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y L + + + TY LLKA C SG ++ A AV +EM +P ++ VYN IDG
Sbjct: 679 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 738
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ +A ++ Q+MK++ +P TYT I+ KA A + EM + KPNI
Sbjct: 739 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 798
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
TYT L+ +AR L E+A +E+++ GI+PD Y+ L+ + L+SR
Sbjct: 799 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS--LLSR 845
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A+C + +E+AEA+ REM + G+ +Y++ +DG + +K + +F+R+K
Sbjct: 415 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 474
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ TY +INLY K K AL++ M+ K N+ TY+ ++N F +
Sbjct: 475 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 534
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A +FE + G++PDV YN ++ A+
Sbjct: 535 NAFAVFEDMVKEGMKPDVILYNNIISAF 562
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++++ + A AVF +M K G+ P ++YN+ I GN +A++ + M
Sbjct: 519 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 578
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ +P+T T+ +I+ Y K+ +L++F+ MR C P + T+ L+N +
Sbjct: 579 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 638
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E+A EI +++ AG+ + + Y +M+ Y
Sbjct: 639 EKAVEILDEMTLAGVSANEHTYTKIMQGY 667
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
T E+ R PT T+ ++ Y SG + ++ VF MR+ G P+ +N I+GL+
Sbjct: 574 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 633
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKASKSFM------------ 242
+ +KAVEI M + TYT ++ Y GKA + F
Sbjct: 634 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 693
Query: 243 -----------------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
AL + EM + N Y L++ +AR G EA ++ +Q+
Sbjct: 694 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 753
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
+ G++PD++ Y + + A + I M +G +P+ +Y ++ + RA L
Sbjct: 754 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 813
Query: 335 EGKCS 339
E S
Sbjct: 814 EKALS 818
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++K Y G + +A F MR G+ P++ +Y S I G + +A+
Sbjct: 305 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 364
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + KA + A F+E + N Y ++ A +
Sbjct: 365 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 424
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRAS 320
E AE + +++ GI+ + Y+ +M+ Y +++ G P +
Sbjct: 425 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 484
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV--ELSVKH 349
Y +++ Y + G S V E VKH
Sbjct: 485 YGCLINLYTKVGKISKALEVSRVMKEEGVKH 515
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q ++AE E+ + Y ++ Y M +K VF+ +++ G
Sbjct: 418 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 477
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I+ K G KA+E+ + MK + + + +TY++MIN + K A
Sbjct: 478 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 537
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M KP++ Y +++AF G + A + +++Q P + ++ Y
Sbjct: 538 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 597
Query: 305 -------RLISRMHM----GCEPDRASYNIMVDA 327
R + M GC P ++N +++
Sbjct: 598 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 631
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+++ YG++ +A T+ + PT Y L+ AY + +++A + R+M++
Sbjct: 312 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE 371
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S V Y+ + G K G+ + A F KR + Y +I + + A
Sbjct: 372 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 431
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM I Y +++ + ++ +F++L+ G P V Y L+
Sbjct: 432 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 491
Query: 304 YRLISRMHMGCEPDRA-----------SYNIMVDAY 328
Y + ++ E R +Y++M++ +
Sbjct: 492 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 527
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G N Q + F+++ + PS + LM+ YG+ A + F MR+ P
Sbjct: 289 GDNWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 344
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
YT+L++A+A +EA +++ GIE + Y+ ++ +
Sbjct: 345 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 387
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 28/225 (12%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E++ IP TY+ ++ C + +EKA +F+EM++ G+ P Y +
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTL 163
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D K G ++A F M++D C P+ TYT +I+ Y K K A ++F M S+ C
Sbjct: 164 LDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGC 223
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI-----------------EPDVYAYN 298
PNI TYTAL++ + G E+A +I+ +++ + EP+V Y
Sbjct: 224 VPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYG 283
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
AL+ EA L+ M + GCEP++ Y+ ++D + + G
Sbjct: 284 ALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVG 328
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 115/271 (42%), Gaps = 63/271 (23%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + L ++A + E+ C P TY L+ AY + L +A +F M G
Sbjct: 163 LLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC-----------------QPSTETY 227
P+ V Y + IDG K G +KA +I+ RMK D +P+ TY
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTY 282
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A L M C+PN Y AL++ F + G +EA+E+F ++ G
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLG 342
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P+VY Y++L+ E
Sbjct: 343 HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AYRL+ M GC P+ +Y M+D +G+AG
Sbjct: 403 AYRLMLMMEEKGCYPNVVTYTAMIDGFGKAG 433
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L+ + + + C G EKA V REM G P + Y+ I
Sbjct: 71 AERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIG 130
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L +KA ++FQ MKR+ P TYT +++ + K A F+EM+ C P
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
N+ TYTAL++A+ + A EIFE + G P++ Y AL++ +
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 142 YLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y ++DS P TY L+ C + +++A + M G P+ ++Y++ IDG
Sbjct: 266 YFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFC 325
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G +A E+F +M C P+ TY+ +I+ K + +ALK+ +M + C PN+
Sbjct: 326 KVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVV 385
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM- 312
YT +V+ + G +EA + ++ G P+V Y A+++ + R + + +
Sbjct: 386 IYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM 445
Query: 313 ---GCEPDRASYNIMVDAYGRAGL 333
GC P+ +Y ++++ AGL
Sbjct: 446 TSKGCAPNFITYRVLINHCCAAGL 469
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P + Y L+ +C G L++A+ VF +M +G P+ Y+S ID L K A+
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLAL 369
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT M++ K K+ A +L M C PN+ TYTA+++ F
Sbjct: 370 KVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGF 429
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---AYRLISRMHMGCEPDRASY 321
+ G + E+ + + G P+ Y L+ A L+ H E + +Y
Sbjct: 430 GKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTY 484
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +A+ + ++L C P TY+ L+ L+ A V +M +
Sbjct: 320 LIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS 379
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V+Y +DGL K G +A + M+ C P+ TYT MI+ +GKA + L
Sbjct: 380 CAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCL 439
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L M S C PN TY L+N GL ++A ++ E+++ + Y ++E +
Sbjct: 440 ELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF 499
Query: 305 --RLISRMHM-------GCEPDRASYNIMVDAYGRAG-------LHEGKCSYS 341
++ + + G P Y +++D + +AG LHE S+S
Sbjct: 500 SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS 552
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 103/246 (41%), Gaps = 52/246 (21%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG-- 202
++ C P+ + L+ AYC SG A + ++M G P VVYN I G+
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 203 ---------------------------------------GNPQKAVEIFQRMKRDCCQPS 223
G +KA + + M P
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+ TY+ +I ASK A +LF EM+ + P++ TYT L++ F + GL E+A F+
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 284 QLQGAGIEPDVYAYNALMEAY---RLISR--------MHMGCEPDRASYNIMVDAYGRAG 332
++Q G P+V Y AL+ AY R +SR + GC P+ +Y ++D + +AG
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241
Query: 333 LHEGKC 338
E C
Sbjct: 242 ETEKAC 247
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 74/195 (37%), Gaps = 36/195 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+ +G+ + L+L+ S+ C P TY +L+ C +GLL+ A + EM++
Sbjct: 425 MIDGFGKAGRVDRC-LELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQT 483
Query: 184 GLP---------------------------------PSAVVYNSYIDGLLKGGNPQKAVE 210
P P VY ID +K G + A+E
Sbjct: 484 YWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALE 543
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + + TY +I A K A KL+++M P + L+
Sbjct: 544 LHEELS-SFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLL 602
Query: 271 REGLCEEAEEIFEQL 285
R G EEA ++ + +
Sbjct: 603 RVGKWEEALQLSDSI 617
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L +A VF +M++ G P V Y + ID K G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++QRM+ P T TY+++IN GKA A KLF EM C PN+ TY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
+++ A+ + A +++ +Q AG EPD Y+ +M EA + + M
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 569 NWIPDEPVYGLLVDLWGKAG 588
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + ++ ++ C P TY L+ + +G L+ A +++ M+ G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A ++F M C P+ TY +M++L+ KA AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
KL+ +M++ +P+ TY+ ++ G EEAE +F ++Q PD Y L++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGR 330
A++ M H G P+ + N ++ + R
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + ++ M RD CQP+T TY +I+ YG+A+
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ +FN+M+ CKP+ TY L++ A+ G + A ++++++Q G+ PD + Y+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 301 ME----------AYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
+ A++L M GC P+ +YNIM+D + + AG
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 536 EPDKVTYSIVMEVLGH 551
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 134 LHKKAEF------TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
+H KA F Y + P TY++++ +G L A +F EM G P
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ V YN +D K N Q A+++++ M+ +P TY++++ + G A +F
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
EM+ P+ Y LV+ + + G E+A + ++ + AG+ P+V N+L+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVD--AYGRAGLHEGKC 338
EAY L+ M +G P +Y +++ GR+ L G C
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC 666
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C P TY +++ + + + A ++R+M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M++ P Y L+++L+GKA A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M +PN+ T +L++ F R EA E+ + + G+ P + Y L+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 77/144 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + + ++ A Y ++ ++ P + TY+++++ G LE+AEAVF EM++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN +KA + +Q M +P+ T +++ + + +K A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 244 LKLFNEMRSHKCKPNICTYTALVN 267
+L M + +P++ TYT L++
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLS 652
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+LL C PT TY +L++A + G +++A + EM GL P YN+ I G+ K G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A E+ + ++ C+P +Y +++ K KL +M S KC PN+ TY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ R+G EEA + + ++ G+ PD Y+Y+ L+ A+ R+ +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD +YN ++ + G
Sbjct: 398 GCLPDIVNYNTVLATLCKNG 417
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 16/189 (8%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K + + KA V + K+G P YN+ I+G K A + RM+
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P T TY +MI K +ALK+ N++ S C+P + TYT L+ A EG +EA
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAY 328
++ +++ G++PD++ YN ++ A+ ++ + + GCEPD SYNI++
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL--- 305
Query: 329 GRAGLHEGK 337
RA L++GK
Sbjct: 306 -RALLNQGK 313
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E+L+ P Y L+ +C ++ A V MR P V YN I L
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G A+++ ++ D CQP+ TYT++I ALKL +EM S KP++ TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM 312
++ +EG+ + A E+ L+ G EPDV +YN L+ E +L+++M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 313 -GCEPDRASYNIMVDAYGRAG 332
C+P+ +Y+I++ R G
Sbjct: 327 EKCDPNVVTYSILITTLCRDG 347
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A + ++ E ++ +C P TY++L+ C G +E+A + + M++
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P A Y+ I + G A+E + M D C P Y ++ K K+ A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L++F ++ C PN +Y + +A G A + ++ GI+PD YN+++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 302 --------EAYRLISRMHMGCE--PDRASYNIMVDAYGRA 331
EA+ L+ M CE P +YNI++ + +A
Sbjct: 483 LCREGMVDEAFELLVDMR-SCEFHPSVVTYNIVLLGFCKA 521
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +LL+A G E+ E + +M P+ V Y+ I L + G ++A+
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + MK P +Y +I + + + +A++ M S C P+I Y ++
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRMHMGCEPDR 318
+ G ++A EIF +L G P+ +YN + A + ++ M G +PD
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 319 ASYNIMVDAYGRAGL 333
+YN M+ R G+
Sbjct: 474 ITYNSMISCLCREGM 488
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 142 YLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+LE ++ C+P Y +L C +G ++A +F ++ + G P++ YN+ L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G+ +A+ + M + P TY MI+ + A +L +MRS + P++
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
TY ++ F + E+A + E + G G P+ Y L+E
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y + A SG +A + EM G+ P + YNS I L + G +A
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M+ PS TY +++ + KA + A+ + M + C+PN TYT L+
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 270 AREGLCEEAEEIFEQL 285
G EA E+ L
Sbjct: 554 GFAGYRAEAMELANDL 569
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A LE++ + P E TY ++ C G++++A + +MR PS V YN +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
G K + A+ + + M + C+P+ TYT++I G A A++L N++
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L +A VF +M++ G P V Y + ID K G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++QRM+ P T TY+++IN GKA A KLF EM C PN+ TY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
+++ A+ + A +++ +Q AG EPD Y+ +M EA + + M
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 569 NWIPDEPVYGLLVDLWGKAG 588
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + ++ ++ C P TY L+ + +G L+ A +++ M+ G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A ++F M C P+ TY +M++L+ KA AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
KL+ +M++ +P+ TY+ ++ G EEAE +F ++Q PD Y L++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGR 330
A++ M H G P+ + N ++ + R
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + ++ M RD CQP+T TY +I+ YG+A+
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ +FN+M+ CKP+ TY L++ A+ G + A ++++++Q G+ PD + Y+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 301 ME----------AYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
+ A++L M GC P+ +YNIM+D + + AG
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 536 EPDKVTYSIVMEVLGH 551
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 134 LHKKAEF------TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
+H KA F Y + P TY++++ +G L A +F EM G P
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ V YN +D K N Q A+++++ M+ +P TY++++ + G A +F
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
EM+ P+ Y LV+ + + G E+A + ++ + AG+ P+V N+L+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVD--AYGRAGLHEGKC 338
EAY L+ M +G P +Y +++ GR+ L G C
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC 666
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C P TY +++ + + + A ++R+M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M++ P Y L+++L+GKA A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M +PN+ T +L++ F R EA E+ + + G+ P + Y L+
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 77/144 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + + ++ A Y ++ ++ P + TY+++++ G LE+AEAVF EM++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN +KA + +Q M +P+ T +++ + + +K A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 244 LKLFNEMRSHKCKPNICTYTALVN 267
+L M + +P++ TYT L++
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLS 652
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D+Y +L++ C +G +A + ++ + G+ ++YN+ L K ++F++
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P TY ++I+ +G+ + A+ +F E+ CKP+I +Y +L+N + G
Sbjct: 468 MKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F+++Q G+ PDV Y+ LME + R+ M GC+P+ +YNI
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 324 MVDAYGRAG 332
++D ++G
Sbjct: 588 LLDCLEKSG 596
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 152 PTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P+ D TY +L+ ++ G +++A +F E+ + P + YNS I+ L K G+ +A
Sbjct: 473 PSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M+ P TY+ ++ +GK + MA LF EM C+PNI TY L++
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ G EA +++ +++ G+ PD Y L
Sbjct: 593 EKSGRTAEAVDLYTKMKQQGLTPDSITYTVL 623
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+AY S KA V+ E+R+ G YN +D L K +KA ++F+ M
Sbjct: 205 TYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM 261
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+ +YT+MI G+ K A+ LFNEM + N+ Y L+ A+ +
Sbjct: 262 KKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
++A ++F ++ G P+ Y Y+ ++
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLVL 347
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T+ Y+ L++ G + +A +F +M + + Y S ++ L G +A+E+
Sbjct: 371 TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML 430
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
++ T Y + + GK + LF +M+ P+I TY L+++F R
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRV 490
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY-RLISRMHMGCEPDRASY 321
G +EA IFE+L+ + +PD+ +YN+L+ EA+ R G PD +Y
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 322 NIMVDAYGRAGLHEGKCSYSLVE 344
+ +++ +G+ + +YSL E
Sbjct: 551 STLMECFGKT--ERVEMAYSLFE 571
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 60/258 (23%)
Query: 135 HKKAEFTYLELLDS-----------------RCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
HK F Y LLD+ C E +Y ++++ G ++A +F
Sbjct: 234 HKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLF 293
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY--- 234
EM GL + V YN+ + L KG KA+++F RM C+P+ TY+L++NL
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAE 353
Query: 235 ---------GKASKSFM--------------------ALKLFNEMRSHKCKPNICTYTAL 265
+ SK +M A +LF +M S K +Y ++
Sbjct: 354 GQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---YRLISRMH--------MGC 314
+ + G EA E+ ++ G+ D YN + A + IS +H G
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 315 EPDRASYNIMVDAYGRAG 332
PD +YNI++ ++GR G
Sbjct: 474 SPDIFTYNILISSFGRVG 491
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ +A + EL S C P +Y L+ +G +++A F+EM++
Sbjct: 482 ILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ ++ K + A +F+ M CQP+ TY ++++ K+ ++ A
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEA 601
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +M+ P+ TYT L
Sbjct: 602 VDLYTKMKQQGLTPDSITYTVL 623
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I M + + T ++I +G M L+L ++ K N TY L+ A+
Sbjct: 158 ILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCLRL---VKKWGLKMNSFTYKCLLQAYL 214
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRMHMGCEPDRAS 320
R +A +++ +++ G + D++AYN L++A + + + H C D S
Sbjct: 215 RSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRH--CRRDEYS 272
Query: 321 YNIMVDAYGRAGLHE 335
Y IM+ GR G ++
Sbjct: 273 YTIMIRTMGRIGKYD 287
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 118/226 (52%), Gaps = 10/226 (4%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVLMSCVS------ILLIEAYGQKSLHKKAEFTYLE 144
PT T++ LIN V+ R + + ++ VS +++ Y KA F Y
Sbjct: 622 PTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA-FEYFT 680
Query: 145 LLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
L + + + TY LLKA C SG ++ A AV +EM +P ++ VYN IDG + G
Sbjct: 681 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 740
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ +A ++ Q+MK++ +P TYT I+ KA A + EM + KPNI TYT
Sbjct: 741 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 800
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
L+ +AR L E+A +E+++ GI+PD Y+ L+ + L+SR
Sbjct: 801 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS--LLSR 844
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 69 ILRFVQREVDSNTIWDAFD-----SLPPTHATWDDLINVSVQLR--------LNKKWDPI 115
+++F R D + + F+ + PT + LI+ R + K +
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 116 VLMSCVSILLIEAYGQKSLHKKA-EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ MS V+ +I K+ H +A ++ + E Y ++ A+C + +E+AE
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ REM + G+ +Y++ +DG + +K + +F+R+K P+ TY +INLY
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K K AL++ M+ K N+ TY+ ++N F + A +FE + G++PDV
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 295 YAYNALMEAY 304
YN ++ A+
Sbjct: 555 ILYNNIISAF 564
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A+C G +++A +EM+K P+ + I G K G+ ++++E+F M+
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P+ T+ +IN G K A+++ +EM N TYT ++ +A G
Sbjct: 617 RCGCVPTVHTFNGLIN--GLVEKR-QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 673
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA-----------SYNIMV 325
+A E F +LQ G++ D++ Y AL++A RM + YNI++
Sbjct: 674 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 733
Query: 326 DAYGRAG 332
D + R G
Sbjct: 734 DGWARRG 740
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 42/217 (19%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE---------- 174
+++ Y + KK + L + PT TY L+ Y G + KA
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 175 -------------------------AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
AVF +M K G+ P ++YN+ I GN +A+
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M++ +P+T T+ +I+ Y K+ +L++F+ MR C P + T+ L+N
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN-- 632
Query: 270 AREGLCE--EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
GL E +A EI +++ AG+ + + Y +M+ Y
Sbjct: 633 ---GLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGY 666
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++K Y G + +A F MR G+ P++ +Y S I G + +A+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + KA + A F+E + N Y ++ A +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRAS 320
E AE + +++ GI+ + Y+ +M+ Y +++ G P +
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV--ELSVKH 349
Y +++ Y + G S V E VKH
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q ++AE E+ + Y ++ Y M +K VF+ +++ G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I+ K G KA+E+ + MK + + + +TY++MIN + K A
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M KP++ Y +++AF G + A + +++Q P + ++ Y
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 305 -------RLISRMHM----GCEPDRASYNIMVDA 327
R + M GC P ++N +++
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+++ YG++ +A T+ + PT Y L+ AY + +++A + R+M++
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S V Y+ + G K G+ + A F KR + Y +I + + A
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM I Y +++ + ++ +F++L+ G P V Y L+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 304 YRLISRMHMGCEPDRA-----------SYNIMVDAY 328
Y + ++ E R +Y++M++ +
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G N Q + F+++ + PS + LM+ YG+ A + F MR+ P
Sbjct: 291 GDNWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
YT+L++A+A +EA +++ GIE + Y+ ++ +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A + E++ P TY L+ C G L+ A + EMRK G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + +YNS ++G+ K GN ++A+++ + M+ P TYT +I+ Y + A
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL EM +P + T+ L+N F G+ E+ + + + GI PD YN LM+ +
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
++ RM + G PD +YNI++ + +A
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +GQ + + + E++ P E TY L+ YC +G + A ++ EM + G
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y + IDGL K G A E+ M++ Q + Y M+N KA A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL EM P+ TYT +++A+ R G ++A ++ +++ G++P V +N LM +
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAY 328
RL+ M G PD +YN ++ +
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
SI+L+ KS +AE E++ + IP Y L+ + G + A F EM
Sbjct: 333 SIILLLCKIGKSF--EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEML 390
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ P + Y + I G +GG + +F M +P TYT +I++Y KA +
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A L NEM PNI TY AL++ + G + A E+ ++++ G++ +V YN+++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 302 ----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A +L+ M + G +PD +Y ++DAY R G
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
I+ + V LI + + + A + E+L + P TY L++ + G + + +
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F EM GL P V Y + ID K G A + M + P+ TY +I+
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A +L +EMR + N+C Y ++VN + G E+A ++ ++++ AGI+PD
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538
Query: 295 YAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
Y +++AY +L+ M G +P ++N++++ + G+ E
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +++ + C G +++A + +M P V Y++ IDG G +KA+++ M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ +P+ TY +I L K KSF A K+ EM S K P+ YT L++ F + G
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
A + F+++ I PD Y L++ + +ISR G +PD +Y
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR---GLKPDEVTY 436
Query: 322 NIMVDAYGRAG 332
++D Y +AG
Sbjct: 437 TTLIDVYCKAG 447
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ ++ YC G L+KA + +M+ GL P+ YNS I L K G +A ++
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P YT +I+ + K A K F+EM S K P+ TYT L+ F +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G E + +F ++ G++PD Y L++ Y M MG P+ +
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 471 YGALIDGLCKHG 482
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+AY + KA E+LD PT T+ +L+ +CM G+LE + + M + G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P A+ YN+ + + +I++RM+ P + TY ++I + KA A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L+ EM P + +Y AL+ F ++ EA E+FE+++G G+ D YN ++
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ +P TY L+K +C+ + +++ MR G+ P + YN I G K N
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A +++ M P+ +Y +I + K K A +LF EMR H + Y
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNF 718
Query: 265 LVNAFAREG-------LCEEAEE 280
V+ EG LC+EA E
Sbjct: 719 FVDMCYEEGDVEITLNLCDEAIE 741
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 14/174 (8%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+E A VF E YG+ + YN I L + G ++A + +M P +Y+
Sbjct: 242 IEMAIKVFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ Y + ALKL ++M+ KPN TY +++ + G EAE++ ++
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358
Query: 290 IEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAG 332
I PD Y L+ + + + PD +Y ++ +G+ G
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGG 412
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + K+A F Y E+++ +PT +Y L+K + + +A +F EMR +
Sbjct: 648 ILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGH 707
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
GL +YN ++D + G+ + + + C
Sbjct: 708 GLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKC 743
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 15/221 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A + AE +++D+ P + TY ++ Y G E+A +FREM G
Sbjct: 157 IINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRG 216
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA- 243
L P V +NS++D L K G ++A EIF M +P+ TY ++ L+G A++ A
Sbjct: 217 LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGIL--LHGYATEGCFAD 274
Query: 244 -LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ FN M+ N +T L++A+A+ G+ +EA I ++QG G+ PDV+ Y+ L+
Sbjct: 275 MMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLIS 334
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
A + R+ G +P+ Y+ ++ + G
Sbjct: 335 ALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHG 375
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 12/234 (5%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D IV V +LI+AY ++ + +A E+ P TY+ L+ A C G L
Sbjct: 283 KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRL 342
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTL 229
A F +M G+ P+ VVY+S I G G+ KA E +++ M +P+ +
Sbjct: 343 ADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNS 402
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+++ K + A +F+ ++ + +I + L++ + G +A + + + AG
Sbjct: 403 IVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAG 462
Query: 290 IEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAG 332
I PD + YN L+ Y R+ G +P +YNI++D RAG
Sbjct: 463 IGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG 516
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK-YGL-PPSAVVYNSYIDGLLKGGNPQK 207
C+P +YA++LK C ++A + R M K G+ P V YN+ I G K G K
Sbjct: 75 CVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGK 134
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ M + P T+ +IN KA A L +M + PN TYT++++
Sbjct: 135 ACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIH 194
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA--------------YRLISRMHMG 313
++ G EEA ++F ++ G G+ PD+ ++N+ M++ Y + ++ H
Sbjct: 195 GYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGH-- 252
Query: 314 CEPDRASYNIMVDAYGRAG 332
P+ +Y I++ Y G
Sbjct: 253 -RPNIVTYGILLHGYATEG 270
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++ + G + KA ++ EM + G P V +NS I+ L K A
Sbjct: 112 CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAE 171
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M + P+ TYT MI+ Y + A K+F EM P+I ++ + +++
Sbjct: 172 LLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSL 231
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS--------- 320
+ G +EA EIF + G P++ Y L+ Y GC D S
Sbjct: 232 CKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYAT-----EGCFADMMSFFNTMKGDG 286
Query: 321 -------YNIMVDAYGRAGLHE 335
+ I++DAY + G+ +
Sbjct: 287 IVANCLVFTILIDAYAKRGMMD 308
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 152 PTEDTYALLL-----------------------------------KAYCMSGLLEKAEAV 176
P TY +LL AY G++++A +
Sbjct: 254 PNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLI 313
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
EM+ GL P Y++ I L + G AV+ F +M QP+T Y +I +
Sbjct: 314 LSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCT 373
Query: 237 ASKSFMALKLFNEMRSHKC-KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
A +L EM ++ +PNI + ++V++ +EG +A IF+ ++ G D+
Sbjct: 374 HGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDII 433
Query: 296 AYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+N L++ Y L+ M G PD +YN +V+ Y ++G
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSG 481
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ L+ YC+ G + KA +V M G+ P YN+ ++G K G + +F+ M
Sbjct: 435 FNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMS 494
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+T TY ++++ +A ++ A K+ +EM ++ TY ++ R +
Sbjct: 495 DKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTD 554
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMV 325
EA +F++L ++ ++ N ++ + + R G P+ ++Y IM+
Sbjct: 555 EAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMI 614
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y KA F+ L+ + S I P TY L+ Y SG ++ +FREM
Sbjct: 438 LIDGYCLVGEMGKA-FSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ V YN +DGL + G A ++ M S TY +++ + + + A
Sbjct: 497 KIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ +F ++ + K NI T ++N+ EEA+++F + +G+ P+ Y ++
Sbjct: 557 IVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRN 616
Query: 302 --------EAYRLISRMH-MGCEP 316
EA + S M GC P
Sbjct: 617 LLKEGSVEEADNMFSSMEKSGCAP 640
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 125 LIEAY-GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ + L K E Y + + P + ++ + C G + A +F ++
Sbjct: 367 LIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDI 426
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G +++N+ IDG G KA + M P T TY ++N Y K+ +
Sbjct: 427 GERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDG 486
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LF EM K KP TY +++ R G A+++ ++ G G + YN +++
Sbjct: 487 LNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKG 546
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA TY E+LD +P TY+ ++ A C + ++KA V M K G+ P + YNS +
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G P++A+ ++M+ D +P+ TY+ ++N K +S A K+F+ M +
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------L 306
P+I TY L+ +A +G E + + + GI+PD + +N L+ AY +
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAG 332
S+M G P+ Y ++D ++G
Sbjct: 399 FSKMRQHGLNPNVVCYGTVIDVLCKSG 425
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L + G +KA + + EM G+ P V Y+S I L K KA+E+
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P TY +++ Y + + A+ +MRS +PN+ TY++L+N +
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHM--------GCEPDRAS 320
G EA +IF+ + G+EPD+ Y L++ Y + MH G +PD
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 321 YNIMVDAYGR 330
+NI++ AY +
Sbjct: 379 FNILICAYAK 388
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ AY +++A VF +MR++GL P+ V Y + ID L K G+ A+
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P+ YT +I+ K A +L EM N + +++++ +
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E+E++F+ + G++PD+ YN L+ EA +L++ M +G +PD +
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 321 YNIMVDAYGRA 331
Y +++ Y R
Sbjct: 554 YGTLINGYCRV 564
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P Y ++ C SG ++ A F +M
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ +VY S I GL KA E I + + R C +T + +I+ + K +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIE 499
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I TY L++ G +EA ++ + G++PD+ Y L+
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y +SRM G P+ +YNI++
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE LE+LD + ++ ++C G + ++E +F M + G+ P + YN+ I
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG G +A ++ M +P TY +IN Y + S+ AL LF EM S
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PNI TY ++ A+E++ + +G + ++ YN ++ EA R+
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ + + + ++NIM+ A + G
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCG 670
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ Y K+A T ++ P TY+ L+ C +G +A +F M K G
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + + G G + + M R+ QP + ++I Y K K A+
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F++MR H PN+ Y +++ + G ++A FEQ+ G+ P++ Y +L+
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + +++D P Y L+ C +KAE + EM G+ + + +NS ID
Sbjct: 430 AMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID 489
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
K G ++ ++F M R +P TY +I+ A K A KL M S KP
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+I TY L+N + R ++A +F+++ +G+ P++ YN +++
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ PT TYA+L+ C +G L+ A + K G A+ + + GL A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 209 VEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTA 264
++I +RM C P +Y ++ ++S AL+L + M R P++ +Y
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMG 313
++N F +EG ++A + ++ GI PDV Y++++ A L + + G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD +YN ++ Y +G
Sbjct: 267 VMPDCMTYNSILHGYCSSG 285
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 11/238 (4%)
Query: 69 ILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWDPIVLMSCVSIL 124
IL + R + NTI+ F+S+ +H +I + +R+ K D I +
Sbjct: 469 ILEMLDRGICLNTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT----- 521
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +A ++ P TY L+ YC ++ A A+F+EM G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YN + GL A E++ + + Q TY ++++ K + + AL
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
++F + + T+ ++ A + G +EA+++F G+ PDV Y+ + E
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 699
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C++G +++A + M G+ P V Y + I+G + A+ +
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P+ TY +++ ++ A +L+ + + + TY +++ +
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A RM G PD +
Sbjct: 634 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 693
Query: 321 YNIMVD 326
Y++M +
Sbjct: 694 YSLMAE 699
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + S A + E++ S P TY ++L+ + A+ ++ + K G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
YN + GL K +A+ +FQ + Q T T+ +MI K + A
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF ++ P++ TY+ + +G EE +++F ++ G D N+++
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR-- 734
Query: 305 RLISRMHMGCEPDRASYNIMVD 326
+L+ R G +Y M+D
Sbjct: 735 KLLQR---GDITRAGTYLFMID 753
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A + E++ P TY L+ C G L+ A + EMRK G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + +YNS ++G+ K GN ++A+++ + M+ P TYT +I+ Y + A
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL EM +P + T+ L+N F G+ E+ + + + GI PD YN LM+ +
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
++ RM + G PD +YNI++ + +A
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +GQ + + + E++ P E TY L+ YC +G + A ++ EM + G
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y + IDGL K G A E+ M++ Q + Y M+N KA A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL EM P+ TYT +++A+ R G ++A ++ +++ G++P V +N LM +
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGF 583
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAY 328
RL+ M G PD +YN ++ +
Sbjct: 584 CMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
SI+L+ KS +AE E++ + IP Y L+ + G + A F EM
Sbjct: 333 SIILLLCKIGKSF--EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEML 390
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ P + Y + I G +GG + +F M +P TYT +I++Y KA +
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A L NEM PNI TY AL++ + G + A E+ ++++ G++ +V YN+++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 302 ----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A +L+ M + G +PD +Y ++DAY R G
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
I+ + V LI + + + A + E+L + P TY L++ + G + + +
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F EM GL P V Y + ID K G A + M + P+ TY +I+
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A +L +EMR + N+C Y ++VN + G E+A ++ ++++ AGI+PD
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538
Query: 295 YAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
Y +++AY +L+ M G +P ++N++++ + G+ E
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +++ + C G +++A + +M P V Y++ IDG G +KA+++ M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ +P+ TY +I L K KSF A K+ EM S K P+ YT L++ F + G
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
A + F+++ I PD Y L++ + +ISR G +PD +Y
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR---GLKPDEVTY 436
Query: 322 NIMVDAYGRAG 332
++D Y +AG
Sbjct: 437 TTLIDVYCKAG 447
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ ++ YC G L+KA + +M+ GL P+ YNS I L K G +A ++
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P YT +I+ + K A K F+EM S K P+ TYT L+ F +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G E + +F ++ G++PD Y L++ Y M MG P+ +
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 471 YGALIDGLCKHG 482
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+AY + KA E+LD PT T+ +L+ +CM G+LE + + M + G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P A+ YN+ + + +I++RM+ P + TY ++I + KA A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L+ EM P + +Y AL+ F ++ EA E+FE+++G G+ D YN ++
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ +P TY L+K +C+ + +++ MR G+ P + YN I G K N
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A +++ M P+ +Y +I + K K A +LF EMR H + Y
Sbjct: 659 LKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNF 718
Query: 265 LVNAFAREG-------LCEEAEE 280
V+ EG LC+EA E
Sbjct: 719 FVDMCYEEGDVEITLNLCDEAIE 741
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 14/174 (8%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+E A VF E YG+ + YN I L + G ++A + +M P +Y+
Sbjct: 242 IEMAIKVFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ Y + ALKL ++M+ KPN TY +++ + G EAE++ ++
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358
Query: 290 IEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAG 332
I PD Y L+ + + + PD +Y ++ +G+ G
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGG 412
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + K+A F Y E+++ +PT +Y L+K + +A +F EMR +
Sbjct: 648 ILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGH 707
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
GL +YN ++D + G+ + + + C
Sbjct: 708 GLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKC 743
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++S K+A + + +RC P TY ++ Y G KAE +F +++ G
Sbjct: 342 LISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNG 401
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + K GN +K +I + M + TY +I++YGK + AL
Sbjct: 402 FSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ +M+S P+ TYT L++ + EEA ++ ++ AG++P ++ Y+AL+ AY
Sbjct: 462 RLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAY 521
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGR 330
+ R G + D +Y++M+D + R
Sbjct: 522 AKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLR 558
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 150 CIPTEDTYALLLKA-----YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
C P ++ L+ A +SGL A + E+ K+GL P + YN+ I + N
Sbjct: 295 CEPDIVSFNTLINAKVKSCATVSGL---AIELLDEVGKFGLRPDIITYNTLISACSRESN 351
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+ +F M+ + CQP TY MI++YG+ + A LF +++S+ P+ TY +
Sbjct: 352 LKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNS 411
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MG 313
L+ AF++EG E+ +I E++ G D YN ++ EA RL M G
Sbjct: 412 LLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSG 471
Query: 314 CEPDRASYNIMVDAYGRA 331
PD +Y +++D G+A
Sbjct: 472 RNPDAVTYTVLIDLLGKA 489
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L++EA+ Q + + Y + + PT Y L++ C + + EM +
Sbjct: 898 LLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGE 957
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P ++NS + Q I+Q ++ P ETY +I +Y + +
Sbjct: 958 AGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEE 1017
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L L ++M+S +P TY +++ AF+++ L ++AEE+FE+L+ G + D Y+ +M+
Sbjct: 1018 GLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMK 1077
Query: 303 AYR----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
YR L+ M G EP+ A+ ++++ +YG++G E
Sbjct: 1078 MYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPE 1121
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 56/215 (26%)
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+ KAE+V + + VYN+ + + GN +K E+F M+ C+P ++
Sbjct: 252 IFAKAESVIAD--------TVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFN 303
Query: 229 LMINLYGK--ASKSFMALKLFNE-----------------------------------MR 251
+IN K A+ S +A++L +E M
Sbjct: 304 TLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHME 363
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
S++C+P++ TY A+++ + R G +AE +FE+L+ G PD YN+L+ A+
Sbjct: 364 SNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTE 423
Query: 305 --RLISR--MHMGCEPDRASYNIMVDAYGRAGLHE 335
R IS + MG D +YN ++ YG+ G H+
Sbjct: 424 KVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHD 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 31/252 (12%)
Query: 93 HATWDDLI--NVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC 150
HA +D+I NV+V + I +IE YG+ + + AE + +E L RC
Sbjct: 777 HAEKNDIILDNVTVHI----------------IDIIETYGKLKMWQSAE-SIVENLRQRC 819
Query: 151 IPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
+ + L+ AY SG E+A A+F M + G P+ N + L+ G +
Sbjct: 820 SKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELY 879
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ Q ++ + S + LM+ + +A F K++N M++ P + Y ++
Sbjct: 880 VVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLL 939
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
R + + ++ AG +PD+ +N++++ Y I G PD
Sbjct: 940 CRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDE 999
Query: 319 ASYNIMVDAYGR 330
+YN ++ Y R
Sbjct: 1000 ETYNTLITMYCR 1011
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY ++ Y G ++A ++R+M+ G P AV Y ID L K ++A ++
Sbjct: 441 EMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMS 500
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M +P+ TY+ +I Y K + A + FN MR K + Y+ +++ F R
Sbjct: 501 EMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFN 560
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
++A +++++ AG PD Y ++ A + R +MG
Sbjct: 561 EIKKAAALYQEMIEAGFTPDTGLYEVMLPA---LVRENMG 597
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y + D+ P E+TY L+ YC E+ ++ +M+ GL P Y S I K
Sbjct: 987 YQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSK 1046
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A E+F+ ++ + + Y LM+ +Y + A L M+ +PN T
Sbjct: 1047 QQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTAT 1106
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRM 310
L+ ++ + G EEA+ I + L+ G D Y+++++AY +L
Sbjct: 1107 MHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMK 1166
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
EPD + + A +G
Sbjct: 1167 EAAIEPDHRIWTCFIRAASLSG 1188
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ H +A Y ++ S P TY +L+ + +E+A V EM G
Sbjct: 447 IIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAG 506
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y++ I K G +A E F RM+ + Y++M++ + + ++ A
Sbjct: 507 VKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAA 566
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
L+ EM P+ Y ++ A RE + + E + + + G
Sbjct: 567 ALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELG 611
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ ++ L+ +AE + EL + Y L++K Y SG +KAE + M++ G
Sbjct: 1040 MIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAG 1099
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + K G P++A I + ++ T Y+ +I+ Y K + +
Sbjct: 1100 IEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGI 1159
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ EM+ +P+ +T + A + G +A + LQ G +
Sbjct: 1160 EKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFD 1206
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ G+ S ++A E+LD+ PT TY+ L+ AY G +AE F MR+
Sbjct: 481 VLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRES 540
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G+ + Y+ +D L+ +KA ++Q M P T Y +M+
Sbjct: 541 GIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVML 588
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 206 QKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
Q+A+E+++ + + + ++++ GKA++ +A+++F + S + Y A
Sbjct: 211 QRALELYECLTMQQWYATNARMVATILSVLGKANQEGIAVEIFAKAES-VIADTVQVYNA 269
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------------AYRLISRM-H 311
++ +AR G E+ E+F ++ G EPD+ ++N L+ A L+ +
Sbjct: 270 MMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGK 329
Query: 312 MGCEPDRASYNIMVDAYGR-AGLHEGKCSYSLVE 344
G PD +YN ++ A R + L E +S +E
Sbjct: 330 FGLRPDIITYNTLISACSRESNLKEAIGVFSHME 363
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 13/168 (7%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R++ ++ + I L K G A+E ++ S Y +I+ K+ +
Sbjct: 674 REHAPDDIQMITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQF 733
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD------- 293
+A +LF++MR + +P+ C Y ++V+ + R G E A+ + + I D
Sbjct: 734 DIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHII 793
Query: 294 --VYAYNAL---MEAYRLISRMHMGCEP-DRASYNIMVDAYGRAGLHE 335
+ Y L A ++ + C DR +N ++ AY +G +E
Sbjct: 794 DIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYE 841
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ + + TY LL+ A + +E+AE + +EMR+ G+ P V YN I+G + G
Sbjct: 347 EMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCG 406
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +KA+ +F M +P+ ETYT +I+++GK ++ A + F + P+I +
Sbjct: 407 NAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFN 466
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
AL++ G + A ++ +++ A + PD +N LM+ Y +L+ M
Sbjct: 467 ALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKER 526
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +PD SYN ++ Y + G
Sbjct: 527 GIKPDHISYNTLISGYSKRG 546
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+LL+S +P TY L+ C G L+KA A EM G+ S YN I L
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A ++ + M+ +P TY + IN Y + + AL LF+EM +P + TYT
Sbjct: 372 RIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HM 312
+L++ F + EAEE F++ G+ PD+ +NAL++ A++L+ M +
Sbjct: 432 SLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491
Query: 313 GCEPDRASYNIMVDAYGR 330
PD ++N ++ Y R
Sbjct: 492 KVVPDEVTFNTLMQGYCR 509
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA + E+++ PT +TY L+ + + +AE F++ K G+ P +++N+
Sbjct: 409 KKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNAL 468
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
IDG GN +A ++ + M P T+ ++ Y + K A KL +EM+
Sbjct: 469 IDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI 528
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
KP+ +Y L++ +++ G ++A E+F+++ G +P + YNAL++ Y
Sbjct: 529 KPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEE 588
Query: 306 LISRMH-MGCEPDRASYNIMVDA 327
L+ M G PD ++Y +++A
Sbjct: 589 LLREMQSKGITPDDSTYLYVIEA 611
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 95/181 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+++ +AE + + + +P + L+ +C++G +++A + +EM
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +N+ + G + ++A ++ MK +P +Y +I+ Y K AL
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F+EM S P + TY AL+ +++ G + AEE+ ++Q GI PD Y ++EA
Sbjct: 553 EVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Query: 305 R 305
+
Sbjct: 613 K 613
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A F Y E++ + T+ +++ C G +KA+ M YG+ P+ V YN+
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G G + A +IF+ MK +P TY I+ K + A + ++
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----- 310
PN TY AL++ +G ++A +++ GI V+ YN L+ A L R+
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAED 378
Query: 311 ------HMGCEPDRASYNIMVDAYGRAG 332
G EPD +YNI ++ Y R G
Sbjct: 379 MIKEMREKGVEPDVVTYNIQINGYCRCG 406
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 140 FTYLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F L L +R + T + LLL AYC ++A M++ + P NS +
Sbjct: 132 FNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSL 191
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
LLK + A +++ M + + S T+ +MIN+ + K A M + KPN
Sbjct: 192 LLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPN 251
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ TY ++N + G E A +IF+ ++ ++PD Y YN+ + EA ++
Sbjct: 252 VVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC 311
Query: 309 R-MHMGCEPDRASYNIMVDAYGRAG 332
+ + G P+ +YN ++D G
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKG 336
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
L L W V++ +S LL K + + + L + + C P Y ++ +
Sbjct: 115 LILKTGWRVNVIV--ISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFF 172
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
G +EKA +F EM G+PP+ V Y + IDGL K +A +FQ+M +P
Sbjct: 173 REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNG 232
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY +I+ Y K +++ EM +H +P+ TY L++ + G C EA F+ +
Sbjct: 233 TYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSM 292
Query: 286 QGAGIEPDVYAYNALMEAYRL---ISRMHM--------GCEPDRASYNIMVDAYGRAGLH 334
GI+PDV Y L+ Y +S MH G P+R +NIM AY + +
Sbjct: 293 FRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMI 352
Query: 335 E 335
E
Sbjct: 353 E 353
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S+ P TY++L+ +C G LE A F + K G + +V + + GL +
Sbjct: 84 SKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDE 143
Query: 208 AVEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A +I RM C P Y +IN + + + A LF EM PN+ TYT ++
Sbjct: 144 ATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVI 203
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCE 315
+ + + + A+ +F+Q+ G++PD YN L+ Y +++ M G E
Sbjct: 204 DGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE 263
Query: 316 PDRASYNIMVDAYGRAG 332
PD +Y +++D + G
Sbjct: 264 PDCITYALLLDYLCKNG 280
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ +KA +LE++D P TY ++ C + ++++A+ VF++M G
Sbjct: 167 VINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRG 226
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN I G L G ++ V++ + M +P TY L+++ K + A
Sbjct: 227 VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286
Query: 245 KLFNEMRSHKCKPNICTYTALVN-----------------------------------AF 269
F+ M KP++ Y L++ A+
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAY 346
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
A++ + EEA IF +++ G+ PDV ++ AL++A
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDA 380
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 26/267 (9%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM-----------SCVS-ILLIEAYGQKSLHK 136
+ P + T++ LI+ + KW +V M C++ LL++ + +
Sbjct: 227 VKPDNGTYNCLIHGYLS---TGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCR 283
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + + P YA+LL Y G L + + M G+ P+ ++N
Sbjct: 284 EARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMF 343
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K ++A+ IF +M++ P ++ +I+ K + A+ FN+M +
Sbjct: 344 CAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVT 403
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRL 306
PNI +++LV G E+AEE+F ++ GI D +N L MEA RL
Sbjct: 404 PNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRL 463
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAG 332
I M +G P+ SYN +V + G
Sbjct: 464 IDLMIRVGVRPNVISYNTLVAGHCLTG 490
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KAE + E+LD + L+ C G + +A+ + M + G+ P+ + YN+
Sbjct: 423 EKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTL 482
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ G G +A ++ M + +P+ TYT+++ Y KA + A LF EM
Sbjct: 483 VAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV 542
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P + TY +++ + G EA E++ + + + D+Y YN ++ EA++
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFK 602
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ R+ + D ++NIM+ A + G E
Sbjct: 603 MFRRLCSKDPQLDSVTFNIMIGALLKGGRKE 633
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY +LL+ YC + ++ A ++FREM G+ P YN+ + GL + G +A E+
Sbjct: 509 PNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + TY +++N K + A K+F + S + + T+ ++ A +
Sbjct: 569 YLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLK 628
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPD----------RASY 321
G E+A ++F + G+ PDV Y + E LI +G E D A
Sbjct: 629 GGRKEDAMDLFATISAYGLVPDVVTYRLIAE--NLIEEGSLG-EFDGLFSAMEKSGTAPN 685
Query: 322 NIMVDAYGRAGLHEGKCSYSLVEL 345
+ M++A R LH G S + V L
Sbjct: 686 SHMLNALVRRLLHRGDISRAGVYL 709
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 13/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L+ Y K + ++L+L+ + P + ++ AY ++E+A +F +MR+
Sbjct: 306 ILLHGYATKGALSEMH-SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ 364
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P V + + ID L K G AV F +M + P+ ++ ++ K
Sbjct: 365 QGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +LF E+ + + L+ EG EA+ + + + G+ P+V +YN L+
Sbjct: 425 AEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVA 484
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRA 331
+ L R+ G +P+ +Y I++ Y +A
Sbjct: 485 GHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKA 524
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + A + ++++ P ++ L+ C G EKAE +F E+ G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ AV +N+ + L G +A + M R +P+ +Y ++ + + A
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KL + M S+ KPN TYT L+ + + ++A +F ++ G+ P V YN ++
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHG 555
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 77/202 (38%), Gaps = 49/202 (24%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG---NP 205
RC+ E A +A S L++A +F E+ P S +N + + + G
Sbjct: 11 RCLELERVIAS--RARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSAS 68
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++ V +F RM R+C S K PN CTY+ L
Sbjct: 69 ERVVSLFTRMAREC--------------------------------SSKVAPNACTYSIL 96
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----EAYR-------LISRM-HMG 313
+ F R G E F + G +V + L+ +A R L+ RM G
Sbjct: 97 IGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFG 156
Query: 314 CEPDRASYNIMVDAYGRAGLHE 335
C PD +YN +++ + R G E
Sbjct: 157 CPPDVVAYNTVINGFFREGQVE 178
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 118/226 (52%), Gaps = 10/226 (4%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVLMSCVS------ILLIEAYGQKSLHKKAEFTYLE 144
PT T++ LIN V+ R + + ++ VS +++ Y KA F Y
Sbjct: 622 PTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA-FEYFT 680
Query: 145 LLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
L + + + TY LLKA C SG ++ A AV +EM +P ++ VYN IDG + G
Sbjct: 681 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 740
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ +A ++ Q+MK++ +P TYT I+ KA A + EM + KPNI TYT
Sbjct: 741 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 800
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
L+ +AR L E+A +E+++ GI+PD Y+ L+ + L+SR
Sbjct: 801 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS--LLSR 844
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 69 ILRFVQREVDSNTIWDAFD-----SLPPTHATWDDLINVSVQLR--------LNKKWDPI 115
+++F R D + + F+ + PT + LI+ R + K +
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 116 VLMSCVSILLIEAYGQKSLHKKA-EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ MS V+ +I K+ H +A ++ + E Y ++ A+C + +E+AE
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ REM + G+ +Y++ +DG + +K + +F+R+K P+ TY +INLY
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K K AL++ M+ K N+ TY+ ++N F + A +FE + G++PDV
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 295 YAYNALMEAY 304
YN ++ A+
Sbjct: 555 ILYNNIISAF 564
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A+C G +++A +EM+K P+ + I G K G+ ++++E+F M+
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P+ T+ +IN G K A+++ +EM N TYT ++ +A G
Sbjct: 617 RCGCVPTVHTFNGLIN--GLVEKR-QAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 673
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA-----------SYNIMV 325
+A E F +LQ G++ D++ Y AL++A RM + YNI++
Sbjct: 674 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 733
Query: 326 DAYGRAG 332
D + R G
Sbjct: 734 DGWARRG 740
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 42/217 (19%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE---------- 174
+++ Y + KK + L + PT TY L+ Y G + KA
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 175 -------------------------AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
AVF +M K G+ P ++YN+ I GN +A+
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M++ +P+T T+ +I+ Y K+ +L++F+ MR C P + T+ L+N
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN-- 632
Query: 270 AREGLCE--EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
GL E +A EI +++ AG+ + + Y +M+ Y
Sbjct: 633 ---GLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGY 666
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++K Y G + +A F MR G+ P++ +Y S I G + +A+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + KA + A F+E + N Y ++ A +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRAS 320
E AE + +++ GI+ + Y+ +M+ Y +++ G P +
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV--ELSVKH 349
Y +++ Y + G S V E VKH
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q ++AE E+ + Y ++ Y M +K VF+ +++ G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I+ K G KA+E+ + MK + + + +TY++MIN + K A
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M KP++ Y +++AF G + A + +++Q P + ++ Y
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 305 -------RLISRMHM----GCEPDRASYNIMVDA 327
R + M GC P ++N +++
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+++ YG++ +A T+ + PT Y L+ AY + +++A + R+M++
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S V Y+ + G K G+ + A F KR + Y +I + + A
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM I Y +++ + ++ +F++L+ G P V Y L+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 304 YRLISRMHMGCEPDRA-----------SYNIMVDAY 328
Y + ++ E R +Y++M++ +
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G N Q + F+++ + PS + LM+ YG+ A + F MR+ P
Sbjct: 291 GDNWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
YT+L++A+A +EA +++ GIE + Y+ ++ +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + KA+ + ++ C P DTY L+K +C S +E +FREM G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V Y + I GL G+ A ++F++M D P TY+++++ K AL
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F+ M+ + K +I YT ++ + G ++ ++F L G++P+V YN ++
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EAY L+ +M G PD +YN ++ A+ R G
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +++ C G ++ A + +M + V++N+ ID L K + A+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 210 EIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+F+ M+ +P+ TY+ +I+ YG+ S A +L ++M K PN+ T+ AL+
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALI 262
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CE 315
+AF +EG EAE++ + + I+PD++ YN+L+ + + R+ C
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 316 PDRASYNIMVDAYGRA 331
PD +YN ++ + ++
Sbjct: 323 PDLDTYNTLIKGFCKS 338
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T + LL YC + A A+ +M + G P + + + I GL +AV +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + CQP+ TY +++N K +A L N+M + K + ++ + ++++ +
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F++++ GI P+V Y++L+ +A +L+S M P+ +
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 321 YNIMVDAYGRAG 332
+N ++DA+ + G
Sbjct: 258 FNALIDAFVKEG 269
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ + P T+ L+ A+ G +AE + +M K + P YNS I+G
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++F+ M C P +TY +I + K+ + +LF EM + TYT
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ +G C+ A+++F+Q+ G+ PD+ Y+ L++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C + A A+ +M K G PS V +S ++G G AV + +M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+P T T+T +I+ L+ KAS+ A+ L + M C+PN+ TY +VN +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASY 321
G + A + +++ A IE DV +N ++ +A L M G P+ +Y
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 322 NIMVD---AYGR 330
+ ++ +YGR
Sbjct: 224 SSLISCLCSYGR 235
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 15/193 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ ++ + C ++ A +F+EM G+ P+ V Y+S I L G A ++ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T+ +I+ + K K A KL ++M P+I TY +L+N F +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
+A+++FE + PD+ YN L++ + L M H G D +Y ++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 326 DAYGRAGLHEGKC 338
H+G C
Sbjct: 368 QGL----FHDGDC 376
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
PS +N + + K + + ++M+R + TY ++IN + + S+ +AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
+M +P+I T ++L+N + +A + +Q+ G PD + L+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 302 -----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+ RM GC+P+ +Y ++V+ + G
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + +++ P TY++LL C +G LEKA VF M+K + +Y + I+
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKC 255
G+ K G ++F + +P+ TY MI+ G SK + A L +M+
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS--GLCSKRLLQEAYALLKKMKEDGP 496
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
P+ TY L+ A R+G + E+ +++
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ SR +P+ + LL A + ++ +M++ G+ + YN I+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+ + +M + +PS T + ++N Y + A+ L ++M +P+ T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG- 313
L++ EA + +++ G +P++ Y ++ A+ L+++M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 314 CEPDRASYNIMVDA 327
E D +N ++D+
Sbjct: 181 IEADVVIFNTIIDS 194
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G ++ +F + G+ P+ V YN+ I GL Q+A + ++MK
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
D P + TY +I + + + +L EMRS
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +K KA + ++ P TY++L+ ++C G +E+A EM G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ + YNS I G + GN +K + Q+M +D P T+ +I+ Y K A
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAF 562
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+FN M +P+ TY ++N F+ +G EEA +F+++ +GIEPD Y Y +L+
Sbjct: 563 NVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGH 622
Query: 302 -------EAYRLISR-MHMGCEPD 317
EA++L MH G PD
Sbjct: 623 VTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ P +++ L+ + G ++ A A REM+ GL P V+Y I G +
Sbjct: 285 YKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCR 344
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ +A+ + M C P TY ++N K + A +L NEM+ P++CT
Sbjct: 345 AGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCT 404
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
+T L++ + R+G E+A ++F+ L + PDV AYN+L++ A L MH
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
P+ +Y+I++D++ G
Sbjct: 465 AREIFPNHVTYSILIDSHCEKG 486
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E+ + P T+ L+ YC G EKA +F + L P V YNS ID
Sbjct: 386 AEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLID 445
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G+ + G+ KA E++ M P+ TY+++I+ + + + A +EM S P
Sbjct: 446 GMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP 505
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---- 313
NI TY +++ + R G ++ ++ +++ I PD+ +N L+ Y MH
Sbjct: 506 NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 314 -------CEPDRASYNIMVDAYGRAG 332
+PD +YN++++ + G
Sbjct: 566 NIMEKEMVQPDAVTYNMIINGFSEQG 591
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+++ +Y + KA+ T + ++ RC+ P T+ +L+ A +G ++ A A+ M
Sbjct: 162 IMVHSYCKSLEFDKAD-TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P V +NS + GL K KA E+F+ M + P ++ ++I + + +
Sbjct: 221 KGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEE 280
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A+K + EM+ P++ +++ L+ F+ G + A +++G G+ PD Y ++
Sbjct: 281 AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA R+ M +GC PD +YN +++
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNG 376
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI+++ +K ++A F +L E++ +P TY ++K YC SG ++K + ++M +
Sbjct: 477 ILIDSHCEKGQVEEA-FGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQ 535
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P + +N+ I G +K N A +F M+++ QP TY ++IN + +
Sbjct: 536 DNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEE 595
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
A ++F +M + +P+ TY +L+N G +EA ++ +++ G PD
Sbjct: 596 AGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA+ + + P ++ +L+ +C G +E+A ++EM++ G+ P V ++ I
Sbjct: 245 KAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G A + MK P YT++I + +A AL++ +EM C
Sbjct: 305 GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL 364
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
P++ TY L+N ++ +AEE+ +++ G+ PD+ + L+ Y
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRAG 332
+ +H PD +YN ++D R G
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKG 451
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y +L S T +++ +YC S +KA+ V EM K + P V +N ID
Sbjct: 141 AEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID 200
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G+ A+ + M +P T+ ++ K + A ++F M P
Sbjct: 201 ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAP 260
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------ 311
++ ++ L+ F R G EEA + ++++Q G+ PDV +++ L+ + +M
Sbjct: 261 DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYL 320
Query: 312 -----MGCEPDRASYNIMVDAYGRAG 332
+G PD Y +++ + RAG
Sbjct: 321 REMKGLGLVPDGVIYTMVIGGFCRAG 346
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 11/228 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI Y Q ++A + LLD R LL A +G AE +R +
Sbjct: 92 LLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLVLSS 151
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+A N + K KA + M++ C P T+ ++I+ +A A
Sbjct: 152 DSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L + M + KP I T+ +++ + ++A+E+F + + PDV ++N L+
Sbjct: 212 IALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGG 271
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA + M G PD S++ ++ + G + +Y
Sbjct: 272 FCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL S P + LL++ Y S +A FR + + +P A N+ + L + G
Sbjct: 78 LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGW 137
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P A E ++ + + + T +M++ Y K+ + A + +EM P++ T+
Sbjct: 138 PHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMH 311
L++A R G + A + + + G++P + +N+++ E +R + +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+ PD S+NI++ + R G
Sbjct: 258 VA--PDVRSFNILIGGFCRVG 276
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F +MR+ G+ P V +N+
Sbjct: 386 QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTL 445
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A E+F+ M+ C P T TY +MINL G+ + +EM+
Sbjct: 446 IDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGL 505
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY G
Sbjct: 506 VPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY-----AQRGLR 560
Query: 316 PDRASYNIMVDAYGR 330
PD +Y ++ A R
Sbjct: 561 PDVITYTTLMKALIR 575
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + + K AE E+ P E TY+LL+ AY +G E A + +EM G
Sbjct: 305 LLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G+ QKA + + M+ +P Y +MI+ +GK + A+
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAM 424
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
FN+MR +P++ T+ L++A + G + A E+FE+++ + P YN ++
Sbjct: 425 DAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLL 484
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++S M G P+ +Y +VD YGR+G
Sbjct: 485 GEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG 523
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM+
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A++ F +M+ + +P T+ +I+ + K + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRA 458
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF EMR C P TY ++N + E E + +++ G+ P++ Y L++
Sbjct: 459 AELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKCSYS 341
Y R G +P Y+ +V+AY + GL +Y+
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYT 567
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A G +AE +LE L P Y LLK Y L+ AE V EM +
Sbjct: 269 LISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQC 328
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G K+
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM++ +P+ Y +++ F + A + F +++ GIEPDV +N L
Sbjct: 389 FAVLR---EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTL 445
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++A+ L M C P +YNIM++ G EG
Sbjct: 446 IDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEG 492
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + H +A + E+ +S C P TY +++ E EA+ EM++ G
Sbjct: 445 LIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y + +D + G ++A++ + MK D +PS Y ++N Y +
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ-------- 556
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+P++ TYT L+ A R ++ I+E++ +G PD A L
Sbjct: 557 --------RGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGL 608
Query: 305 RLISRMHMG 313
+ I M +
Sbjct: 609 KYIKHMRVA 617
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC----CQPSTETYTLMINLYG 235
+R++ P Y+ + LL +P A + +R+ D +P ++ +I+ +
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAA-LLERLLGDLRESRLEPDAPLFSDLISAFA 239
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDV 294
+A+ AL+L ++ P TAL++A G EAE +F + AG I+P
Sbjct: 240 RAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 295 YAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I+ + G PD A+Y+++VDAY RAG
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A + L ++A + ++L + P +Y L+ A+C + L +A V+ EM + G
Sbjct: 301 LLVALANEGLGREARQVFDKML-GQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 359
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VV+N+ I+GLL+G +AV++F+ MK P+ TYT++I + K K MA+
Sbjct: 360 MKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAM 419
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F EM+ +C+P++ TYT L+ + + + E++ G PD YNAL+
Sbjct: 420 ECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLL 479
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+A R+ +M G +P +YN+M+ +Y
Sbjct: 480 TNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSY 514
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ ++RC P TY LL Y + +++ AV EM + G PP A YN+ I L
Sbjct: 422 FEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTN 481
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEMRSHKCKPNIC 260
P A I+++M + P+ TY +M+ Y +++ M ++ EM P++
Sbjct: 482 RKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVN 541
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+YT ++ R G EEA + E++ G++
Sbjct: 542 SYTVFISGHIRHGRPEEAYKYIEEMINKGMK 572
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF MRK G +N + L G ++A ++F +
Sbjct: 261 DAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDK 320
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P +YT ++ + A A +++NEM KP++ + ++ R
Sbjct: 321 MLGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQR 379
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ + +M M C+PD A+Y
Sbjct: 380 QHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTC 439
Query: 324 MVDAYGRA 331
++ YG A
Sbjct: 440 LLVGYGNA 447
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
S + + + I + A + A+ +F MR + + ++ L+ A A EGL EA ++F
Sbjct: 259 SMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVF 318
Query: 283 EQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+++ G PD+ +Y ALM EA R+ + M G +PD +N M++
Sbjct: 319 DKMLGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIE----- 372
Query: 332 GLHEGKCSYSLVEL 345
GL G+ + V++
Sbjct: 373 GLLRGQRQHEAVKM 386
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG + E+ C P TY L+K + + A ++++M K G
Sbjct: 440 LLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKG 499
Query: 185 LPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN + G N +++ M R P +YT+ I+ + + + A
Sbjct: 500 LDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEA 559
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
K EM + K ++ G + E+ ++++ AG
Sbjct: 560 YKYIEEMINKGMKAPQIDCNKFAADLSKAGKLDMLYELAQKVKFAG 605
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+F + L++ PT TY L+ A + + EM + G+ P +++ N+
Sbjct: 74 QEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAI 133
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHK 254
I+ + GN ++A+EIFQ+M+ C+P+T T+ +I YG K ++KL M R+
Sbjct: 134 INAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTN 193
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR--------- 305
KPN TY LV A ++ +EA + Q+ +G++PDV YN L AY
Sbjct: 194 LKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAE 253
Query: 306 --LISRMHMGCEPDRASYNIMVDAYGRAG 332
++ ++ P+ + I+V Y G
Sbjct: 254 SIIVDMLNKKVNPNERTCGIIVGGYCEQG 282
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L AY Q KAE +++L+ + P E T +++ YC G L +A V MR G
Sbjct: 239 LARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLG 298
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V++NS I G L G+ + M+ +P T++ ++N + A +
Sbjct: 299 IHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQ 358
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F++M +P+I ++ L F R G +AE + + G+ P+V + ++
Sbjct: 359 EIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGW 418
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+A+++ M M P+ ++ ++ YG A
Sbjct: 419 CTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEA 456
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+S P T++ ++ + +G ++K + +F +M K G+ P V++ G ++ G P
Sbjct: 331 ESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPV 390
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA + M + +P+ +T +I+ + A K A K+F M PN+ T+ L+
Sbjct: 391 KAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLI 450
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI 307
+ AEEI + ++ + P+ + EA+R I
Sbjct: 451 WGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSI 491
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK-LFNEMRSHKCKP 257
L++ G PQ+A IF + +P+T TYT ++ + K F A+ L +EM KP
Sbjct: 67 LVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTR-QKRFKAISGLLSEMEETGIKP 125
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------ 311
+ A++NAF+ G +EA EIF++++ +G +P +N L++ Y +I +
Sbjct: 126 DSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLL 185
Query: 312 ------MGCEPDRASYNIMVDA 327
+P+ +YNI+V A
Sbjct: 186 ELMTRTTNLKPNNRTYNILVGA 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ G ++A+ +F + + G P+ V Y + + L + + + M+
Sbjct: 63 LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P + +IN + ++ A+++F +M CKP T+ L+ + EE+
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESM 182
Query: 280 EIFEQL-QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
++ E + + ++P+ YN L+ EA+ ++ +M G +PD +YN + A
Sbjct: 183 KLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARA 242
Query: 328 YGRAG 332
Y + G
Sbjct: 243 YAQDG 247
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
K + + ++L S P +++L K + +G KAE++ M KYG+ P+ V++ + I
Sbjct: 356 KCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTII 415
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G +KA ++F+ M P+ +T+ +I YG+A + + A ++ M
Sbjct: 416 SGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVV 475
Query: 257 PNICTYTALVNAFAREGLCEEAE 279
P T + A+ G+ +A+
Sbjct: 476 PENSTLKLVSEAWRSIGMVNDAK 498
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+ + T ++N+ + K A +FN + +P TYTALV A R+ + +
Sbjct: 56 TVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLL 115
Query: 283 EQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYG 329
+++ GI+PD NA++ EA + +M GC+P +++N ++ YG
Sbjct: 116 SEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYG 173
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
M+C LL+ A GQ H +A + E RC+P E TY L+ C +G L++A +
Sbjct: 1 MNCALNLLVRA-GQ---HGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELL 53
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EMR G+PP V+N I GL K G A+ F+ + C P T+ ++++ K+
Sbjct: 54 DEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKS 113
Query: 238 SKSFMALKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ A ++F M S +C PN+ TYT ++N ++G + A E+ + + G P+V
Sbjct: 114 GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVIT 173
Query: 297 YNALME----------AYRLISRM-HMGCEPDRASYNIMVDA 327
Y+ L+E + L+ M G +PD YN +++
Sbjct: 174 YSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ELLD + C P TY++L++ C +G +K + +EM + G P ++YN+ ++G
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K +A+E+ Q M R C P+ TY ++ L+ ++ + A +L M C P+
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---------------- 302
+ Y ++ R+ ++A+ + +Q+ A PDV Y+ +++
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
A ++ M GC P+ +Y ++++ RA
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 144 ELLDSRCIPTEDTYALLLKAYC------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+++ +RC+P TY+ ++ C LE A + M++ G PP+A Y I+
Sbjct: 301 QMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIE 360
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL + Q+A+ + +RM P +++++I K+ A K+F M +CKP
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N Y AL++ ++ G ++A +FE L P V YN+++ EA R++
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMV 479
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYPA 352
M H C PD ASY ++ G C S VE + + + A
Sbjct: 480 EGMIHKECFPDGASYGALI---------RGLCRVSCVEEAYELFQA 516
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S+C+P TY ++ C G L++A + M + G P+ + Y+ ++GL K G K
Sbjct: 130 SQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+ Q M R QP Y ++N K+ + AL+L M C P + TY +L+
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEP 316
F R + A + + + G PDV YN ++ +A L+ +M C P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 317 DRASYNIMVDA 327
D +Y+ ++D
Sbjct: 310 DVITYSTIIDG 320
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++IE + ++A ++DS +P ++++++ + C S L+ A +F M +
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V Y + IDGL KGG KAV +F+ M +P TY +++ + A
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGVATYNSVLDGLCGVGRIEEA 475
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+++ M +C P+ +Y AL+ R EEA E+F+ ++ G +V YN L+
Sbjct: 476 VRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+NL +A + A++LF R +C PN TY +L++ + G ++A E+ ++++ GI
Sbjct: 5 LNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61
Query: 291 EPDVYAYNALMEAYRLISRM--HMG---------CEPDRASYNIMVDAYGRAGLHE 335
P V +N ++ R +G C PD ++NI+VDA ++G E
Sbjct: 62 PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 10/209 (4%)
Query: 90 PPTHATWDDLINVSVQLR--------LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
PP T+ +I + R L + D V+ S ++ KS A +
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYK 408
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
++ R C P YA L+ G ++KA VF E+ P YNS +DGL
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLC 467
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G ++AV + + M C P +Y +I + S A +LF + + +
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAG 289
Y LVN ++ +A + +L AG
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 16/221 (7%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E++ + C P E T+A ++A+C +GLL++A + +M KYG P ++Y++
Sbjct: 233 EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 292
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G + G +A+++ M C+P+T Y + A + +L EM C
Sbjct: 293 VNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 349
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---- 311
PN T++ L+N+ + L E A E+ EQ+Q G PDV +YN ++ + +R
Sbjct: 350 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 409
Query: 312 ----MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
M C+PD S+N ++ +A K Y VEL K
Sbjct: 410 LLKSMLCKPDTISFNAVLKCLCKA-----KRWYDAVELVAK 445
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C E T+ +L+ + C +G ++ A VF M KY P V Y+S I+G + G
Sbjct: 445 KMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG 504
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A ++F+ M C+ +Y + A++ A +L +M + C PN T+
Sbjct: 505 LDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFN 561
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--------MGCE 315
L+++ ++GL A +++EQ+ GI PD++ YNAL+ Y R+ M CE
Sbjct: 562 ILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE 621
Query: 316 PDRASYNIMVDAYGRA 331
PD SYN ++ RA
Sbjct: 622 PDTISYNSILKGLCRA 637
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 46/233 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG----- 198
E++ C P + T++ L+ + C + L+E A V +M+KYG P V YN+ I
Sbjct: 343 EMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQA 402
Query: 199 ---------------------------LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
L K AVE+ +M + C+ + T+ ++I
Sbjct: 403 RADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILI 462
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ + + A+++F M ++C P+I TY++L+N F+ +GL E A ++F +
Sbjct: 463 DSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CR 519
Query: 292 PDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
D+++YNA + +A LI+ M C P+ ++NI++ + + GL
Sbjct: 520 ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGL 572
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ YC SG L A R + + P YN+ + GL ++A E+ + M
Sbjct: 186 TYTALIDGYCRSGRLADA---LRLIASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREM 242
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R+ C P+ T+ I + + A++L +M + C P++ Y+ LVN F+ G
Sbjct: 243 IRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRV 302
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+EA ++ + P+ YNA + E LI+ M C P+ A+++ +
Sbjct: 303 DEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTL 359
Query: 325 VDAYGRAGLHEGKCSYSLVELSVK 348
+++ C LVE +V+
Sbjct: 360 INSL---------CQNRLVEYAVE 374
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C+P E T+ +L+ + C GL+ +A V+ +M KYG+ P YN+ I+G + G
Sbjct: 547 DMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQG 606
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
A++ M C+P T +Y ++ +A + A KL EM C PN T+
Sbjct: 607 RLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y LK CM+ + A + +M P+ V +N I L + G +A++++++M
Sbjct: 524 SYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQM 583
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P TY +IN Y + + ALK + M C+P+ +Y +++ R
Sbjct: 584 PKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERW 640
Query: 276 EEAEEIFEQLQGAGIEPDVYAY 297
++AE++ ++ P+ +
Sbjct: 641 KDAEKLVTEMLRKNCTPNEVTF 662
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ TYTAL++ + R G +A + + + PD Y YN ++ +A L+
Sbjct: 183 NVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWEQAEELM 239
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAGL 333
M C P+ ++ + A+ + GL
Sbjct: 240 REMIRNSCHPNEVTFATQIRAFCQNGL 266
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +++ C G L++ V EM + G P V YN+ ++G K GN +A+ +
Sbjct: 51 PNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVL 110
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P+ TYT +IN KA A++ F++M PN TYT ++N FA+
Sbjct: 111 HAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
+GL +EA + ++ +G P + YNAL+ + ++ RM G PD S
Sbjct: 171 QGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVS 230
Query: 321 YNIMVDAYGR 330
Y+ ++ + R
Sbjct: 231 YSTIISGFAR 240
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P E TY L+ YC G +A + EM + GL P+ V Y S I+ + K GN +A+E
Sbjct: 85 VPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAME 144
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F +M P+ TYT +IN + + A ++ NEM P+I TY AL+N
Sbjct: 145 FFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHC 204
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGR 330
G EEA + + + G G+ PDV +Y+ +IS E DRA + + V+ G+
Sbjct: 205 VLGRMEEAIGLLQDMVGKGVLPDVVSYST------IISGFARNQELDRA-FQMKVEMIGK 257
Query: 331 AGLHEGKCSYSLVE 344
+ L + SL++
Sbjct: 258 SVLPDAVTYSSLIQ 271
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + C+P TY ++ YC ++A R M GL P+ + +N I+GL +
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++ E+ M R P TY ++N Y K AL L EM + PN+ T
Sbjct: 66 DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
YT+L+N+ + G A E F+Q+ G+ P+ Y ++ EAYR+++ M
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHE 335
G P +YN +++ + G E
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRME 210
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY ++ + GLL++A V EM + G PS V YN+ I+G G ++A+ +
Sbjct: 156 PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGL 215
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M P +Y+ +I+ + + + A ++ EM P+ TY++L+
Sbjct: 216 LQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCE 275
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
+ EA ++F+++ + PD + Y L+ AY L +H+ G PD +
Sbjct: 276 QRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVT 335
Query: 321 YNIMVDAYGR 330
YN++++ +
Sbjct: 336 YNVLINGLNK 345
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + Q+ L +A E+ S IP+ TY L+ +C+ G +E+A + ++M G
Sbjct: 164 IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG 223
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y++ I G + +A ++ M P TY+ +I + + A
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEAC 283
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+F EM + K P+ TYT L+NA+ +EG +A + +++ G PD YN L+
Sbjct: 284 DMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVD 326
EA RL+ ++ + P +YN +++
Sbjct: 344 NKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE 376
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y ++ +A + E++ + P TY L+ + C +G L +A F +M G
Sbjct: 94 LVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG 153
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ Y + I+G + G +A + M R PS TY +IN + + A+
Sbjct: 154 LCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAI 213
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +M P++ +Y+ +++ FAR + A ++ ++ G + PD Y++L++
Sbjct: 214 GLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGL 273
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
R+ C+ PD +Y +++AY + G
Sbjct: 274 CEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEG 312
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 26/235 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + +A +E++ +P TY+ L++ C L +A +F+EM
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA- 243
LPP Y + I+ K G+ KA+ + M + P TY ++IN K ++S A
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353
Query: 244 ---LKLF-----------NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
LKLF N + + C + ALV F +GL +EA+++FE +
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKN 413
Query: 290 IEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+P+ YN + ++AY+L M H+ P + +V A G+
Sbjct: 414 HKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGM 468
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+ F+ M+R+ C P+ TY MI+ Y K ++ A M +PN+ T+ ++N
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHM---GCEP 316
R+G +E E+ ++ G PD YN L+ Y L+ M G P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 317 DRASYNIMVDAYGRAG 332
+ +Y ++++ +AG
Sbjct: 122 NVVTYTSLINSMCKAG 137
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 78/208 (37%), Gaps = 50/208 (24%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ ++ +A + E+L + P E TY L+ AYC G L KA + EM + G
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD---------------CC--------- 220
P AV YN I+GL K ++A + ++ D CC
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388
Query: 221 --------------------------QPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+P+ Y ++I+ + + A KL+ EM
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIF 282
P+ T ALV A EG+ E E+
Sbjct: 449 FVPHTVTVLALVKALFTEGMDGELNEVI 476
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
M L+ F EM + C PN+ TY +++ + + +EA + G+EP++ +N ++
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60
Query: 302 EAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
L+ G PD +YN +V+ Y + G
Sbjct: 61 NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEG 102
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 14/186 (7%)
Query: 86 FDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL 145
+D P+ T++ LI + ++ L++ + K L +A+ + +
Sbjct: 361 YDDSIPSAVTYNTLIENCCNIEFKS-----------AVALVKGFCMKGLMDEADQVFESM 409
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
++ P E Y +++ +C G + KA +++EM P V + + L G
Sbjct: 410 INKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMD 469
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ E+ + R C E +++ + K M L EM P+ T T
Sbjct: 470 GELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPT-- 527
Query: 266 VNAFAR 271
NA AR
Sbjct: 528 -NAIAR 532
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA TY E+LD +P TY+ ++ A C + ++KA V M K G+ P + YNS +
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G P++A+ ++M+ D +P+ TY+ ++N K +S A K+F+ M +
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------L 306
P+I TY L+ +A +G E + + + GI+PD + +N L+ AY +
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAG 332
S+M G P+ Y ++D ++G
Sbjct: 399 FSKMRQHGLNPNVVCYGTVIDVLCKSG 425
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L + G +KA + + EM G+ P V Y+S I L K KA+E+
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P TY +++ Y + + A+ +MRS +PN+ TY++L+N +
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHM--------GCEPDRAS 320
G EA +IF+ + G+EPD+ Y L++ Y + MH G +PD
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 321 YNIMVDAYGR 330
+NI++ AY +
Sbjct: 379 FNILICAYAK 388
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ AY +++A VF +MR++GL P+ V Y + ID L K G+ A+
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P+ YT +I+ K A +L EM N + +++++ +
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E+E++F+ + G++PD+ YN L+ EA +L++ M +G +PD +
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 321 YNIMVDAYGRA 331
Y +++ Y R
Sbjct: 554 YGTLINGYCRV 564
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P Y ++ C SG ++ A F +M
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ +VY S I GL KA E I + + R C +T + +I+ + K +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIE 499
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I TY L++ G +EA ++ + G++PD+ Y L+
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y +SRM G P+ +YNI++
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE LE+LD + ++ ++C G + ++E +F M + G+ P + YN+ I
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG G +A ++ M +P TY +IN Y + S+ AL LF EM S
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PNI TY ++ A+E++ + +G + ++ YN ++ EA R+
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ + + + ++NIM+ A + G
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCG 670
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ QP + ++I Y K K A+ +F++MR H PN+ Y +++ +
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G ++A FEQ+ G+ P++ Y +L+
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + +++D P Y L+ C +KAE + EM G+ + + +NS ID
Sbjct: 430 AMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID 489
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
K G ++ ++F M R +P TY +I+ A K A KL M S KP
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+I TY L+N + R ++A +F+++ +G+ P++ YN +++
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 67 QQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWDPIVLMSCVS 122
+ IL + R + NTI+ F+S+ +H +I + +R+ K D I +
Sbjct: 467 ELILEMLDRGICLNTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT--- 521
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI+ +A ++ P TY L+ YC ++ A A+F+EM
Sbjct: 522 --LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P+ + YN + GL A E++ + + Q TY ++++ K + +
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL++F + + T+ ++ A + G +EA+++F G+ PDV Y+ + E
Sbjct: 640 ALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 699
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ PT TYA+L+ C +G L+ A + K G A+ + + GL A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 209 VEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTA 264
++I +RM C P +Y ++ ++S AL+L + M R P++ +Y
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMG 313
++N F +EG ++A + ++ GI PDV Y++++ A L + + G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD +YN ++ Y +G
Sbjct: 267 VMPDCMTYNSILHGYCSSG 285
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C++G +++A + M G+ P V Y + I+G + A+ +
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P+ TY +++ ++ A +L+ + + + TY +++ +
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A RM G PD +
Sbjct: 634 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 693
Query: 321 YNIMVD 326
Y++M +
Sbjct: 694 YSLMAE 699
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + H + Y +LL S C P T+ +L++ C +G +A R + ++
Sbjct: 33 LLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFS 92
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P ++N I GL K GNP +AV++F+ M+ +P TY +I+ K+ A
Sbjct: 93 VAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAR 152
Query: 245 KLFNEM--RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+L EM + K P+I TY L+NAF R EA E+++ AGI PDV N L+
Sbjct: 153 ELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVS 212
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA ++ M + G PD +YN ++ A AG
Sbjct: 213 GICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T +L+ C G +E+A + M+ G P + YNS I L G +A EI
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C P T+ +++ + KA AL++ EM P++ TYT LVN R
Sbjct: 262 LKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G + A + E++ G PDV AY +L+ EA++L+ M + GC
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378
Query: 321 YNIMVDAYGRAG-LHEGK 337
Y+ +V Y RAG +H+ +
Sbjct: 379 YSSLVSGYCRAGNVHKAR 396
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ LL +C +G+L +A V EM + + P + Y ++GL + G Q A
Sbjct: 267 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 326
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + + R P YT +++ K+ + A KL EM C+ + Y++LV+ +
Sbjct: 327 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGY 386
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
R G +A EI ++ + P ++ YN ++ +A LIS + G PD
Sbjct: 387 CRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 446
Query: 319 ASYNIMVDAYGRAGLHEGKCSYS 341
+YN ++D +A C +
Sbjct: 447 VTYNTLIDGLCKANRVREACDLA 469
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 143 LELLDSRC----IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+L+ C +P TY +L+ C G ++ A + E+ + G P + Y S +DG
Sbjct: 291 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG 350
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K G ++A ++ + M C+ Y+ +++ Y +A A ++ EM S P
Sbjct: 351 LCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPP 410
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
+ TY ++ ++G +A + L G PDV YN L++ +R+ C+
Sbjct: 411 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + KA E++ +P TY ++L G + KA ++ ++ G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ IDGL K ++A ++ M C P+ T ++ + + A
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW 501
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L EM + PN+ YT+L++ + ++A + + ++G G+ D +AY L
Sbjct: 502 SLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKL---- 557
Query: 305 RLISRMHMG-CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
++S H G A Y+ MV R L +G S +L E ++ +
Sbjct: 558 -IVSMSHGGRVAEAMAMYDEMV---ARGFLPDGSTSKTLEEAAMSN 599
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L+ YC +G + KA + EM + P YN + GL+K G+ KAV + +
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P TY +I+ KA++ A L +EM S C PN T ++V R G +
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD 498
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMV-DAYGRAGLHE 335
+A + ++ P+V Y +L++ C+ DR MV DA G+
Sbjct: 499 DAWSLVVEMSRKRHAPNVVVYTSLIDGL---------CKSDRMDDACMVLDAMRGQGVAL 549
Query: 336 GKCSYSLVELSVKH 349
+Y + +S+ H
Sbjct: 550 DDFAYRKLIVSMSH 563
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG--LPPSAVVYNSYIDGLLKGGNP 205
SR P TY ++ C SG LEKA + EM + G P V YN+ I+ +
Sbjct: 126 SRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRI 185
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++A ++MK P T ++++ K AL++ + M+ P++ TY ++
Sbjct: 186 REACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSI 245
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHMGCE--- 315
++A G EA EI + + + PD+ +N L++ + R + + C
Sbjct: 246 IHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 302
Query: 316 -PDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
PD +Y I+V+ R G + + ++ L+E V+
Sbjct: 303 LPDVITYTILVNGLCRVG--QVQVAFYLLEEIVRQ 335
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 22/185 (11%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y LL SG + V++++ G P+ V + I G K G +A+E + +
Sbjct: 29 SYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRAL 88
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P + ++I+ K A+KLF M S + KP I TY +++ + G
Sbjct: 89 DEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNL 148
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
E+A E+ E++ G + PD +YN +++A+ RA
Sbjct: 149 EKARELLEEMIRKGGKS----------------------APDIVTYNTLINAFYRASRIR 186
Query: 336 GKCSY 340
C++
Sbjct: 187 EACAF 191
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ IP Y L+ C SG +E+A + +EM G V+Y+S + G + G
Sbjct: 331 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAG 390
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N KA EI M P TY +++ K A+ L +++ + P++ TY
Sbjct: 391 NVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYN 450
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
L++ + EA ++ +++ G P+
Sbjct: 451 TLIDGLCKANRVREACDLADEMASRGCFPN 480
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 201 KGGNPQKAVEIFQ-RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ P A++ F ++D + +Y ++++ K+ F K++ ++ C PN+
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
T+ L+ + G A E L + PDVY +N L+ +A +L
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 310 MHMG-CEPDRASYNIMVDAYGRAG 332
M +P+ +YN ++ ++G
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSG 146
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L +A VF +M++ G P V Y + ID K G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++QRM+ P T TY+++IN GKA A KLF EM C PN+ TY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
+++ A+ + A +++ +Q AG EPD Y+ +M EA + + M
Sbjct: 509 IMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 569 NWIPDEPVYGLLVDLWGKAG 588
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + ++ ++ C P TY L+ + +G L+ A +++ M+ G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A ++F M C P+ TY +M++L+ KA AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSAL 524
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL+ +M++ +P+ TY+ ++ G EEAE +F ++Q PD Y L++ +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + ++ M RD CQP+T TY +I+ YG+A+
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ +FN+M+ CKP+ TY L++ A+ G + A ++++++Q G+ PD + Y+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 301 ME----------AYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
+ A++L M GC P+ +YNIM+D + + AG
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGF 535
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 536 EPDKVTYSIVMEVLGH 551
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 134 LHKKAEF------TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
+H KA F Y + P TY++++ +G L A +F EM G P
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ V YN +D K N Q A+++++ M+ +P TY++++ + G A +F
Sbjct: 503 NLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
EM+ P+ Y LV+ + + G E+A + ++ + AG+ P+V N+L+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRV 622
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVD--AYGRAGLHEGKC 338
EAY L+ M +G P +Y +++ GR+ L G C
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGYC 666
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C P TY +++ + + + A ++R+M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNA 533
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M++ P Y L+++L+GKA A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M PN+ T +L++ F R EA E+ + + G+ P + Y L+
Sbjct: 594 WQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 76/144 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + + ++ A Y ++ ++ P + TY+++++ G LE+AEAVF EM++
Sbjct: 509 IMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN +KA + +Q M P+ T +++ + + +K A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEA 628
Query: 244 LKLFNEMRSHKCKPNICTYTALVN 267
+L M + +P++ TYT L++
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLS 652
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG--NPQKAVE 210
T Y ++ Y SG K + +F MR+ G P V +N+ I+ LK G P A+E
Sbjct: 255 TVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIE 314
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++R +P TY +I+ +AS A+ +F++M +H C+P++ TY A+++ +
Sbjct: 315 LLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYG 374
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHMGCEP--------DRA 319
R GL +AE++F L+ G PD +YN+ + A+ + ++ CE D
Sbjct: 375 RCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEM 434
Query: 320 SYNIMVDAYGRAGLHE 335
+YN M+ YG+ G ++
Sbjct: 435 TYNTMIHMYGKQGQND 450
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A + S ++A + +++ C P TY ++ Y GL KAE +F ++ G
Sbjct: 334 LISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 393
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS++ + GN +K +I + M + TY MI++YGK ++ +AL
Sbjct: 394 FFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLAL 453
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ +M+S P++ TYT L+++ + EEA + ++ G++P + Y+AL+ Y
Sbjct: 454 QLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGY 513
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGR 330
+ + G PD+ +Y++M+D + R
Sbjct: 514 AKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLR 550
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L+++A+ + + + Y + + P+ Y ++ + C + EA+ EM +
Sbjct: 889 LLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEE 948
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P ++NS + + + +K +I+QR+K D +P +TY ++I +Y + +
Sbjct: 949 AGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKE 1008
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L L +EMR+ +P + TY +LV +F ++ L E+AEE+FE+LQ G + D Y+ +M+
Sbjct: 1009 GLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMK 1068
Query: 303 AY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y RL S M G EP A+ ++++ +YG +G
Sbjct: 1069 IYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSG 1109
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 13/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
C P ++ L+ A +G + A+ E+R+ GL P + YN+ I + N ++
Sbjct: 287 CEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEE 346
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
AV +F M C+P TY MI++YG+ S A +LFN++ S P+ +Y + +
Sbjct: 347 AVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLY 406
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEP 316
AFAREG E+ ++I E++ G D YN ++ Y +L M G P
Sbjct: 407 AFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNP 466
Query: 317 DRASYNIMVDAYGRA 331
D +Y +++D+ G+
Sbjct: 467 DVITYTVLIDSLGKT 481
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
V + +IEAYG+ L +KAE + S + L++AY SG E+A AVF M
Sbjct: 782 VYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTM 841
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
K G P+ N + L+ G ++ + Q ++ + S + LM++ + +A
Sbjct: 842 MKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNI 901
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F K+++ M++ P++ Y + R + E + +++ AG +PD+ +N++
Sbjct: 902 FEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSV 961
Query: 301 MEAYRLISRMHM-----------GCEPDRASYNIMVDAYGR 330
++ Y I G EPD +YNI++ Y R
Sbjct: 962 LKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCR 1002
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P EDTY +L+ YC ++ + EMR GL P Y S + K ++A E+
Sbjct: 988 PDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEEL 1047
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ ++ C+ Y +M+ +Y + A +LF+ M+ +P I T L+ ++
Sbjct: 1048 FEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGS 1107
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G +EAE++ L+ Y+++++AY +L G EPD
Sbjct: 1108 SGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRI 1167
Query: 321 YNIMVDA 327
+ + A
Sbjct: 1168 WTCFIRA 1174
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 128/296 (43%), Gaps = 55/296 (18%)
Query: 94 ATWDDLINVSVQLRLNKKWDPI---VLMSCVSI------LLIEAYGQKSLHKKAEFTYLE 144
+ + D+I +L+L +K + + + SC+++ LIEAY +++A +
Sbjct: 781 SVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNT 840
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ PT D+ LL+A + G LE+ V +E++ G S +D + GN
Sbjct: 841 MMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGN 900
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLM----------------------------INLYGK 236
+ +I+ MK PS Y +M ++++
Sbjct: 901 IFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNS 960
Query: 237 ASKSFMAL-------KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
K ++A+ +++ ++ +P+ TY L+ + R+ +E + ++++ G
Sbjct: 961 VLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVG 1020
Query: 290 IEPDVYAYNALMEAY---RLISRMH--------MGCEPDRASYNIMVDAYGRAGLH 334
+EP + Y +L+ ++ +L+ + GC+ DR+ Y+IM+ Y +G H
Sbjct: 1021 LEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSH 1076
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P DTY L+ ++ L+E+AE +F E++ G Y+ + G+ KA +
Sbjct: 1023 PKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRL 1082
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK + +P+ T L++ YG + + A K+ + ++ + Y+++++A+ R
Sbjct: 1083 FSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVR 1142
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
G + +Q++ G+EPD + + A L
Sbjct: 1143 NGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASL 1177
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 9/234 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG++ + A Y ++ S P TY +L+ + + +E+A + EM G
Sbjct: 439 MIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTG 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y++ I G K G P +A E F M R +P Y++M++++ + ++ A+
Sbjct: 499 VKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAM 558
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-GIEPDVYAY-----N 298
+ EM P Y ++ E+ + ++ G+ P +Y +
Sbjct: 559 TFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILVKGD 618
Query: 299 ALMEAYRLISR-MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
EA +++ R + E DR + ++ +Y +G H + L+EL +H P
Sbjct: 619 CYDEAAKMLRRAISDRYEIDRENLLSILSSYSSSGRH--SVALDLLELLKEHTP 670
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 30/236 (12%)
Query: 113 DPIVLMSC----VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
+ +V+M C + L E + L FT E L C+ E
Sbjct: 678 EALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQCCLENE-------------- 723
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETY 227
L +A VF +MR G+ S +Y S + K G P+ A + + D + Y
Sbjct: 724 LFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVY 783
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I YG+ A + MR N + AL+ A+A G E A +F +
Sbjct: 784 VDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMK 843
Query: 288 AGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
G P V + N L++A + R+ +G + ++S +M+DA+ RAG
Sbjct: 844 DGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAG 899
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY ++ Y G + A ++R+M+ G P + Y ID L K ++A +
Sbjct: 433 EMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMS 492
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M +P+ TY+ +I Y KA K A + F+ M +P+ Y+ +++ R
Sbjct: 493 EMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFN 552
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ A ++++ GI P+ Y ++
Sbjct: 553 EPKRAMTFYKEMIHDGIMPEHSLYELML 580
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSIL-----------LIEAYGQKSLH 135
D L P T++ LI + R ++ + +VLM + + L+ ++G++ L
Sbjct: 984 DGLEPDEDTYNILI--VMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLV 1041
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE + EL + C Y +++K Y SG KA+ +F M+ G+ P+ +
Sbjct: 1042 EQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLL 1101
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ G PQ+A ++ +K ST Y+ +I+ Y + ++ +++
Sbjct: 1102 MVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGL 1161
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+P+ +T + A + EA + L+ G +
Sbjct: 1162 EPDHRIWTCFIRAASLSQHTSEAILLLNALRDTGFD 1197
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ + ++A E+L++ PT TY+ L+ Y +G +AE F M +
Sbjct: 473 VLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRS 532
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G P + Y+ +D L+ P++A+ ++ M D P Y LM+ G A+K
Sbjct: 533 GTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANK 588
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 206 QKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A E+++ + R P+ + ++ + GKA++ +A+++F + + Y A
Sbjct: 203 HRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVFTRAEP-SVENTVKVYNA 261
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-------------H 311
++ +AR G + +E+F+ ++ G EPD+ ++N L+ A M
Sbjct: 262 MMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRR 321
Query: 312 MGCEPDRASYNIMVDAYGRA 331
G PD +YN ++ A RA
Sbjct: 322 SGLRPDIITYNTLISACSRA 341
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + L ++ ++ + C P YA ++ C G LE A + M YG
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ + GL ++A E+ M + C T+ ++++ + + +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +M SH C P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A L+S+M GC P+ ++N +++ + GL E
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C +G AE + +M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ V +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ A +REG + ++F+ ++ I D YNA++
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y +++ GL
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+AE E+ C + T+ +L+ +C +GL+++ + +M +G P + Y +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A +L ++M C
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A R G
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREG 545
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K L ++A ++L + C P +Y+ ++ +G E+A + M G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y+S L + G K +++F +K + Y +I+ K ++ A+
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
F M S+ C PN TYT L+ A EGL +EA+E+ +L G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+LD C P Y ++L+A C SG + V M G N ++
Sbjct: 131 LEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNA 190
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ + G +AV + +++ C+ +Y ++ A + +L +EM C PN
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
I T+ L+ R GL E E+ Q+ G PD+ Y +++ A +++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 309 RM-HMGCEPDRASYNIMVDAYGRA 331
RM G +P+ YN ++ A
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSA 334
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G + A R +PP+A + + GL G A+E+ M
Sbjct: 82 YNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P Y +++ ++ ++++ M + C + ++NA +G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
EA + +L G E D+ +YNA+++ + R + + C P+ ++N ++
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 259 GYLCRNGLFE 268
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 79/192 (41%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +++ C G + A V EM G P +Y+ ++ + G + +V +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C T L++N + A+ L ++ C+ +I +Y A++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+ EE+ +++ P++ +N L+ + ++++M GC PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 289 YATIIDGICKEG 300
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ C G A +FR+M + G P V Y++ ID L K +A++I
Sbjct: 225 PDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 284
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK P+ TY +I S+ A + NEM S PNI T++ L+N F +
Sbjct: 285 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 344
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRAS 320
EG EA + + + G+EP+V Y++LM Y L + + GC+PD S
Sbjct: 345 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFS 404
Query: 321 YNIMVDAYGRA 331
YNI+++ Y +A
Sbjct: 405 YNILINGYCKA 415
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++ C P TY+ ++ + C + +A +F M+ G+ P+ YNS I GL +
Sbjct: 255 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 314
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + M P+ T++L+IN++ K F A + M +PN+ TY++L+
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
N ++ + EA ++F+ + G +PDV++YN L+ EA +L + M H G
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 434
Query: 316 PDRASYNIMVDAYGRAG 332
PD SYN ++D + G
Sbjct: 435 PDIVSYNTLIDGLCQLG 451
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 15/217 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y ++ +A + ++ C P +Y +L+ YC + + +A+ +F EM G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V YN+ IDGL + G ++A ++F+ M + P TY+++++ + K A
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
+LF M+S KPN+ Y L++A + +EA ++F +L G++P+V Y +
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGL 552
Query: 301 ---------MEAYRLISRMHMGCEPDRASYNIMVDAY 328
+EA+R + GC P+ SYN+++ +
Sbjct: 553 CKEGLLDEALEAFRNME--EDGCPPNEFSYNVIIRGF 587
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ S ++A E++ +P T++LL+ +C G + +A V + M + G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y+S ++G +A ++F M C+P +Y ++IN Y KA + A
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+LFNEM P+I +Y L++ + G EA ++F+ + G PD+ Y+ L++
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482
Query: 303 --------AYRLISRMHMG-CEPDRASYNIMVDA 327
A+RL M +P+ YNI++DA
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
Query: 155 DTYALLLKAYCMSGL--LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
DTY L + C L ++ +V ++ K GL + V +N+ I+GL K G +AVE+F
Sbjct: 156 DTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELF 215
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M QP TYT +IN K ++ A LF +M C+P++ TY+ ++++ ++
Sbjct: 216 DDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKD 275
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASY 321
EA +IF ++ GI P+++ YN+L++ SR M + P+ ++
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335
Query: 322 NIMVDAYGRAG 332
+++++ + + G
Sbjct: 336 SLLINIFCKEG 346
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 9/225 (4%)
Query: 89 LPPTHATWDDLIN-VSVQLRL---NKKWDPIVLMSCVSI-----LLIEAYGQKSLHKKAE 139
+ P T+ L+N S+Q + K +D ++ C +LI Y + +A+
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ E++ P +Y L+ C G L +A +F+ M G P Y+ +DG
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G KA +F+ M+ +P+ Y ++I+ K+ A KLF+E+ +PN+
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNV 542
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
YT ++N +EGL +EA E F ++ G P+ ++YN ++ +
Sbjct: 543 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L++ C +A A+ EM + P+ V ++ I+ K GN +A +
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 354
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P+ TY+ ++N Y ++ A KLF+ M + CKP++ +Y L+N + +
Sbjct: 355 LKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCK 414
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
EA+++F ++ G+ PD+ +YN L+ EA+ L M G PD +
Sbjct: 415 AKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCT 474
Query: 321 YNIMVDAYGRAG 332
Y+I++D + + G
Sbjct: 475 YSILLDGFCKQG 486
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Q ++A + +L + +P TY++LL +C G L KA +FR M+
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V+YN ID + K N ++A ++F + QP+ + YT +IN K AL
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ F M C PN +Y ++ F + A ++ +++ G DV
Sbjct: 563 EAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 89 LPPTHATWDDLINVSVQL-RLNKKWDPIVLMS--------CVSILLIEAYGQKSLHKKAE 139
L P +++ LI+ QL RL + D M C +L++ + ++ KA
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ + + P Y +L+ A C S L++A +F E+ GL P+ +Y + I+GL
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGL 552
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G +A+E F+ M+ D C P+ +Y ++I + + A++L EMR ++
Sbjct: 553 CKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612
Query: 260 CT 261
T
Sbjct: 613 AT 614
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYT 228
++ A A F M P + +N + ++K + AV + ++M+ P T T
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++IN + + + + + ++ + I T+ L+N + G +A E+F+ +
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDA 327
G +PDV+ Y ++ A L +M GC+PD +Y+ ++D+
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE L+++ +PT Y L+ YC +G LE A + F +M+ + P + YN+ I+
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K A ++ M+ + P+ ET+ +I+ YG+ + + +EM+ + KP
Sbjct: 282 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 341
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LI 307
N+ +Y ++VNAF + G EA I + + + P+ YNA+++AY L+
Sbjct: 342 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 401
Query: 308 SRMHM-GCEPDRASYNIMV 325
+M G P +YN+++
Sbjct: 402 EKMKSNGISPSIVTYNLLI 420
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
A+ +E+ D+ PT +T+ L+ AY +G LEK V EM++ GL P+ V Y S +
Sbjct: 291 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 350
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ K G +AV I M P+ + Y +I+ Y + + A L +M+S+
Sbjct: 351 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 410
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA--YR--------L 306
P+I TY L+ + EAEEI L + PD +YN L+ A YR L
Sbjct: 411 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 470
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
RMH G + +Y+ ++ G AG
Sbjct: 471 QQRMHKYGIKSTVRTYHQLISGLGGAG 497
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAE 139
+ P H T++ LIN + R+ D ++ M + LI+AYG+ +K
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
E+ ++ P +Y ++ A+C +G + +A A+ +M + P+A VYN+ ID
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
++ G +A + ++MK + PS TY L+I S+ A ++ N + +H+ P+
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR---------- 309
+Y L++A G ++A ++ +++ GI+ V Y+ L+ R
Sbjct: 449 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 508
Query: 310 -MHMGCEPDRASYNIMVDAYGRAG 332
M P A +NIMV+AY + G
Sbjct: 509 MMQNNVVPSNAIHNIMVEAYSKYG 532
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++LL C G + AE V + + GL P+ V+YN+ I+G + G + A F +M
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 264
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P TY +IN KA + A L EM+ + P + T+ L++A+ R G
Sbjct: 265 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIM 324
E+ + ++Q G++P+V +Y +++ A+ L H P+ YN +
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384
Query: 325 VDAYGRAG 332
+DAY G
Sbjct: 385 IDAYVEHG 392
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY++L +G + ++F + K G+ + ++GL K G
Sbjct: 158 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A E+ Q + P+ Y +IN Y + + A F +M+S KP+ TY
Sbjct: 218 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH-M 312
AL+N + A+++ ++Q G+ P V +N L++AY ++S M
Sbjct: 278 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 337
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ SY +V+A+ + G
Sbjct: 338 GLKPNVVSYGSIVNAFCKNG 357
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 155 DTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPP-SAVVYNSYIDGLLKGGNPQKAVEI 211
DT+A ++A +G L +A + R M + G PP +A YN I G+ + G AVE+
Sbjct: 26 DTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 85
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ TY MI+ + K +L ++M H KPN TY L++ R
Sbjct: 86 FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCR 145
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G E + +++ + PD + Y+ L +
Sbjct: 146 AGRMGETSALLDEMASQKMVPDGFTYSILFDG 177
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY ++ + G LE + +M +GL P+A+ YN + GL + G
Sbjct: 88 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 147
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTL-------------MINLYG--------------- 235
+ + M P TY++ M++L+G
Sbjct: 148 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 207
Query: 236 -------KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
K K +A ++ + + P Y L+N + + G E A F Q++
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267
Query: 289 GIEPDVYAYNALM----EAYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGK 337
I+PD YNAL+ +A R+ + + G P ++N ++DAYGR G E K
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE-K 326
Query: 338 CSYSLVEL 345
C L E+
Sbjct: 327 CFIVLSEM 334
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ +G A VF EM + + P+ + YN+ IDG +KGG+ + +
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M +P+ TY ++++ +A + L +EM S K P+ TY+ L + +R
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G + +F + G+ Y + L+ L S ++ G P R
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240
Query: 321 YNIMVDAYGRAGLHEGKCS 339
YN +++ Y + G EG S
Sbjct: 241 YNTLINGYCQTGELEGAFS 259
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 50 YG-SGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF---DSLPPTHATWDDLINVSVQ 105
YG +G ++ F VLS + L+ V +I +AF +P A DD+ + V
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLK--PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV- 374
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAY 164
L + ++ I I+AY + + +A F +E + S I P+ TY LL+K
Sbjct: 375 LPNAQVYNAI----------IDAYVEHGPNDQA-FILVEKMKSNGISPSIVTYNLLIKGL 423
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C + +AE + + + L P AV YN+ I GN KA+++ QRM + + +
Sbjct: 424 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 483
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +I+ G A + L+ +M + P+ + +V A+++ G +AE++ ++
Sbjct: 484 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 543
Query: 285 L 285
+
Sbjct: 544 M 544
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 44/253 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I AYG+ AE ++ E+ + P + LL+A+ +G +AE++++EM K
Sbjct: 112 LMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKT 171
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASK--- 239
G P+ V Y YI+ L K A IF+ + +P Y LM++ YGKA K
Sbjct: 172 GPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSE 231
Query: 240 ------------------SFMALKLFNE-----------MRSHKCKPNICTYTALVNAFA 270
+F +L F + M++ K KP++ TYT L+NA++
Sbjct: 232 QQALFRQMKGAGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYS 291
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--------MG---CEPDRA 319
+ EEA +F ++ +G+ P AYN L++AY + MG C PD
Sbjct: 292 KARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIR 351
Query: 320 SYNIMVDAYGRAG 332
SY ++ AY G
Sbjct: 352 SYTTLLAAYANTG 364
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Query: 116 VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
V M+ V+ + A+ QK++ AE + ++ P TY L+ AY + +E+A
Sbjct: 244 VPMTVVTFNSLMAF-QKTV-ADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHV 301
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
VFREM GL PS + YN+ +D K + A +F+ M +D C+P +YT ++ Y
Sbjct: 302 VFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYA 361
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
A +L M+ +PN+ TY L+ + + FE LQ AGI+P+
Sbjct: 362 NTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNST 421
Query: 296 AYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDA 327
+ L+ + + GC D+ S ++DA
Sbjct: 422 IFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALMDA 464
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 43/232 (18%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI--------------- 196
P Y L+L Y +G + +A+FR+M+ G+P + V +NS +
Sbjct: 211 PDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLMAFQKTVADAEACLRH 270
Query: 197 -------------DGLLKGGNPQKAVE----IFQRMKRDCCQPSTETYTLMINLYGKASK 239
GL+ + + VE +F+ M +PS Y +++ Y K +
Sbjct: 271 MQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKE 330
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A LF M +C+P+I +YT L+ A+A G ++AE + ++++ AG+EP+V Y
Sbjct: 331 VEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGT 390
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
LM+ Y + ++ G +P+ + ++V +G+ E S+
Sbjct: 391 LMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSW 442
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ L++ AY G AE F EMR+ GL P+ + S ++ + GN +A I+Q M
Sbjct: 110 FNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEML 169
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TY + IN KA + A ++F + S + KP+ Y +++ + + G
Sbjct: 170 KTGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKF 229
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----HMGC---EPDRASYNIMVDA 327
E + +F Q++GAG+ V +N+LM + ++ HM +PD +Y +++A
Sbjct: 230 SEQQALFRQMKGAGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINA 289
Query: 328 YGRA 331
Y +A
Sbjct: 290 YSKA 293
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + + AE + + RC P +Y LL AY +G ++KAE + + M++ G
Sbjct: 321 LLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + + G + ++ F+ +++ +P++ +TL++ +G+ AL
Sbjct: 381 LEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESAL 440
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
F +M C + + AL++A C+ +E+ E L+ G P
Sbjct: 441 SWFKKMLDSGCPADQRSRAALMDA------CQTSEQKQEVLEYFGSLP 482
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ LMI YGK + +A F EMR +PN+ +T+L+ A AR G AE I++++
Sbjct: 110 FNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEML 169
Query: 287 GAGIEPDVYAY----NALMEAYRLISRMHM--------GCEPDRASYNIMVDAYGRAG 332
G P Y NAL +A R + +PD YN+M+ YG+AG
Sbjct: 170 KTGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAG 227
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 94/159 (59%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
+ RC+P + TY++L+ A C G ++A+ EM + P +V+Y+++I G K G
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A+++ + M++ C PST TY L+I + + KS +KL +EM+ PN+ TY +L
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +F ++G+ +A + +++ + P++ +++ L++AY
Sbjct: 626 IKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAY 664
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T+ ++L +C +G +++A + MR G YN ++ GL++ G +A E+
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQEL 338
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + QP++ TY ++++ K K+F A ++ N +RS P++ TYT+L++A+
Sbjct: 339 LREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCS 398
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
+G A I +++ G P+ + YN L+ EA RL+ RM+ G D A
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458
Query: 321 YNIMVDAYGR 330
NI++D R
Sbjct: 459 CNIIIDGLCR 468
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 50/223 (22%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ +C GL+E+AE + MR GL P+ V +N+ I L K G A IFQ M+ D
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDW 272
Query: 220 CQ--PSTETYTLMINLYGKASKSFM----------------------------------- 242
P + T + L G F+
Sbjct: 273 QHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRV 332
Query: 243 --ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +L EM +PN TY +V+ +EG +A + ++ + PDV Y +L
Sbjct: 333 GEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSL 392
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ AY R++ M GC P+ +YN+++ + RAG
Sbjct: 393 LHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F L L S PT Y L+ A L+ EA+++++ G P N + L
Sbjct: 96 FRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQAL 155
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYT--LMINLYGKASKSFMALKLFNEMRSHKCKP 257
G + A +F M P+ ++ ++ Y +A +S ALK+ + M S
Sbjct: 156 CDAGRMELAQRVFDAM------PARNEFSFGILARGYCRAGRSIDALKVLDGMPSM---- 205
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLI 307
N+ +V F +EGL EEAE + E+++ G+ P+V +NA +++AYR+
Sbjct: 206 NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIF 265
Query: 308 SRM-----HMGCEPDRASYNIMVDAYGRAGL 333
M H PD+ ++++M+ + AG
Sbjct: 266 QDMQEDWQHGLPRPDQVTFDVMLSGFCDAGF 296
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
++Y L +G + +A+ + REM G+ P++ YN + GL K G A +
Sbjct: 317 ESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENF 376
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
++ P TYT +++ Y A ++ +EM C PN TY L+ + R G
Sbjct: 377 IRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGR 436
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
EAE + E++ G D N +++ SR+ + + + A GR G
Sbjct: 437 TTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLG 494
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM---- 180
LI A ++S E Y +LL S P T LLL+A C +G +E A+ VF M
Sbjct: 116 LILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARN 175
Query: 181 --------RKY--------------GLPP-SAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
R Y G+P + VV N+ + G K G ++A + +RM+
Sbjct: 176 EFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRV 235
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMR---SHKC-KPNICTYTALVNAFAREG 273
P+ T+ I+ KA + A ++F +M+ H +P+ T+ +++ F G
Sbjct: 236 QGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAG 295
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
+EA + + ++ G V +YN + EA L+ M H G +P+ +YN
Sbjct: 296 FVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYN 355
Query: 323 IMVDAYGRAG 332
I+V + G
Sbjct: 356 IIVSGLCKEG 365
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI A ++ +A+ LE++ P Y + YC G A V R+M K
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS YN I G + ++ +++ MK P+ TY +I + + A
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKA 638
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+ L +EM ++ PNI ++ L+ A+ + A+ +F+
Sbjct: 639 MPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFD 678
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY K A E+ C P TY +LL++ +G +AE + M + G
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
N IDGL + A++I M + G+ SF+++
Sbjct: 452 YSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGS-----------GALGRLGNSFLSV 500
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + S +C P+ TY+ L++A +EG +EA++ ++ I PD Y+ + Y
Sbjct: 501 -VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGY 559
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAY 328
+++ M GC P +YN+++ +
Sbjct: 560 CKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGF 594
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C G A V +R + P V Y S + GN A I
Sbjct: 349 PNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRI 408
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + C P++ TY +++ +A ++ A +L M + +++ R
Sbjct: 409 LDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCR 468
Query: 272 EGLCEEAEEIFEQL--QGAGIEPDVYAYNALMEAYRLI---SRMHMGCEPDRASYNIMVD 326
+ A +I + + +G+G A L ++ + S + C PD+ +Y+I++
Sbjct: 469 NSRLDVAMDIVDGMWEEGSG------ALGRLGNSFLSVVSDSSISQRCLPDQITYSILIS 522
Query: 327 AYGRAGLHEGKCSYSLVELSVK 348
A + G + + L+E+ VK
Sbjct: 523 ALCKEGRFD-EAKKKLLEMIVK 543
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
LLI + +K HK E L E+ + P TY L+K++C G++ KA + EM
Sbjct: 589 LLIRGFEEK--HKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEML 646
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM---INLYGKAS 238
+ L P+ ++ I K + A +F R C Q Y LM + YGK
Sbjct: 647 QNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEV-LYCLMCTELTTYGKWI 705
Query: 239 KSFMALKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
++ L++ EMR S + P Y +++ GLCE E V
Sbjct: 706 EAKNILEMALEMRVSIQSFP----YKQIIS-----GLCEVGE--------------VDHA 742
Query: 298 NALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
++L++ LI++ H+ D A++ ++DA G G
Sbjct: 743 HSLLKL--LIAKRHLF---DPAAFMPVIDALGDRG 772
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY++L+ +C + +EKA + EM + G PP Y S I+ L K + A E+
Sbjct: 408 PSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANEL 467
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K +C S Y +MI +GK + A+ LFNEM KP++ Y AL++ R
Sbjct: 468 FLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVR 527
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPDRAS 320
G+ +EA+ + + G PD+ ++N ++ A + ++M +PD S
Sbjct: 528 AGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVS 587
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ AGL E
Sbjct: 588 YNTVLGCLSHAGLFE 602
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ + A + E+ ++ PT Y LL Y +EKA V +EM+ G
Sbjct: 240 LISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKG 299
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ Y +I GL K G A +F M +D C+P +IN+ GK + + L
Sbjct: 300 CTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTL 359
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF +M S +CKPN+ TY ++ A F + EA FE+++G GI P + Y+ L++
Sbjct: 360 KLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDG 419
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEG 336
+ +R+ G P A+Y ++++ G+ +E
Sbjct: 420 FCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEA 463
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 149 RCIPTEDTYALLLKAY--CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+C P TY ++KA C + E A + F +M+ G+ PS+ Y+ IDG K +
Sbjct: 369 QCKPNVVTYNTVIKALFECKAPASE-AASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIE 427
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA+ + + M P Y +IN GK + A +LF E++ + + Y ++
Sbjct: 428 KALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMI 487
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
F + G EA ++F +++ G +PDVYAYNALM EA L+ M GC
Sbjct: 488 KHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCS 547
Query: 316 PDRASYNIMVDAYGRAGL 333
PD S+NI+++ R G+
Sbjct: 548 PDLNSHNIILNGLARTGV 565
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 92/179 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + G+ ++ A +LEL ++ + YA+++K + G L +A +F EM K G
Sbjct: 451 LINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLG 510
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + G+++ G +A + + M + C P ++ +++N + A+
Sbjct: 511 SKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAI 570
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F +M+S KP+ +Y ++ + GL EEA ++ ++ G E + Y +++EA
Sbjct: 571 EMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEA 629
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL------RLNKKWDPIVL 117
P A++ L ++ +VD + + D INV +Q R N + D
Sbjct: 79 PDAEKALEVLKLKVDHRLVHEVL--------KIDVEINVKIQFFKWAGKRRNFEHDSSSF 130
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
M+ LI + + + + T +++ S C+ + + ++K + ++ KA +V
Sbjct: 131 MA-----LIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYG 235
F +++ P+A YNS I L + G+ +K EI+ M D C P T TY+ +I+ +G
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFG 245
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K A++LF+EM+ + P YT L+ + + E+A ++ ++++ G V+
Sbjct: 246 KLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVF 305
Query: 296 AYNALM----------EAYRL-ISRMHMGCEPDRASYNIMVDAYGRAG 332
Y + +AYR+ + + GC+PD N +++ G+ G
Sbjct: 306 TYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVG 353
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F +E L S+ P Y L+ +G++++A+++ R M + G P +N ++GL
Sbjct: 503 FNEMEKLGSK--PDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGL 560
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ G P +A+E+F +MK +P +Y ++ A A KL EM + N
Sbjct: 561 ARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNN 620
Query: 260 CTYTALVNAFAR 271
TYT+++ A +
Sbjct: 621 ITYTSILEAVGK 632
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +++ ++L +G+ ++A +F +M+ + P AV YN+ + L G ++A
Sbjct: 546 CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAA 605
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASK 239
++ + M + + TYT ++ GK +
Sbjct: 606 KLMREMNLKGFEYNNITYTSILEAVGKVDE 635
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 25/234 (10%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS-RCIPTEDT--YALLLKAYCMSGL 169
DP VL S L+ A +K L +A+ L DS + + T D Y L+ A+C SG
Sbjct: 204 DPAVLAS-----LLGALSKKRLASEAQ----ALFDSYKSVFTPDVVLYTTLVHAWCRSGC 254
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+KAE VF EM++ G+ P+ Y + ID + + G +A E+ +M C P+T T+
Sbjct: 255 LDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNA 314
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC--EEAEEIFEQLQG 287
++ + KA +S L++ N+MR C P+I TY L+ +G + A ++ ++
Sbjct: 315 IMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIA 374
Query: 288 AGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGR 330
G PD + +N +++ A++L RM + C+P+ +YN+++ +G+
Sbjct: 375 KGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGK 428
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 143 LELLDSRCIPTEDTYAL-LLKAYCMSGLLEKAEAVFREMRKYG----------------- 184
L+ + R IP L L++ Y +G+ +A +FR M +YG
Sbjct: 157 LDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALS 216
Query: 185 ------------------LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
P V+Y + + + G KA ++F M++ P+ T
Sbjct: 217 KKRLASEAQALFDSYKSVFTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYT 276
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
YT +I+ +A + A +L +M C PN T+ A++ A + G E+ ++ Q++
Sbjct: 277 YTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMR 336
Query: 287 GAGIEPDVYAYNALME------------AYRLISRM-HMGCEPDRASYNIMV 325
G +PD+ YN LME A +L+ +M GC PD ++N M+
Sbjct: 337 QLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPML 388
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 151 IPTE---DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+PT+ + YA ++ A + EMRK +P S+ V + I ++ G +
Sbjct: 128 LPTDSLPELYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSE 187
Query: 208 AVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A ++F+ M+ P ++ K + A LF+ +S P++ YT LV
Sbjct: 188 ASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKS-VFTPDVVLYTTLV 246
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-YR----------LISRMHMGCE 315
+A+ R G ++AE++F ++Q AGI P+VY Y A+++A YR L + GC
Sbjct: 247 HAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCP 306
Query: 316 PDRASYNIMVDAYGRAGLHE 335
P+ A++N ++ A+ +AG E
Sbjct: 307 PNTATFNAIMRAHVKAGRSE 326
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+A + +A+ +++DS C P T+ +++A+ +G E+ V +MR+ G
Sbjct: 280 VIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLG 339
Query: 185 LPPSAVVYN-----------SYIDGLLKG--------------------------GNPQK 207
P + YN S +D +K GN
Sbjct: 340 CDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDA 399
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++++RM+ C+P+ TY L++ L+GK M L++ +M + +PN+ TY AL+
Sbjct: 400 AHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGALIE 459
Query: 268 AFAREGLCEEA-EEIFEQLQGAGIEPDVYAYNALMEAYR 305
F G + A + E L+ ++P Y+ ++ R
Sbjct: 460 TFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLR 498
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KK LE+ + +PT TY ++ SGL+E A+ F EMR GL P + YNS
Sbjct: 1207 KKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSL 1266
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G K GN ++A+ +F ++R P+ TY ++I+ Y + A L EM C
Sbjct: 1267 LNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGC 1326
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYR 305
PN+CTYT L+ A E F+++ G++PD +AYN + A+
Sbjct: 1327 LPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFE 1386
Query: 306 LISRMHM-GCEPDRASYNIMVDAYGRAG 332
L + + G D +YNI++ + G
Sbjct: 1387 LREVLMLEGISSDTVTYNILIHGLCKTG 1414
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + ++A E+ + C+P TY +L+K L A F EM
Sbjct: 1300 ILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ I L G+ +A E+ + + + T TY ++I+ K A
Sbjct: 1360 GLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L +M S+ +P+ TYT L++A GL EA +IF + G+ P + ++ A
Sbjct: 1420 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 1479
Query: 304 Y----RLIS-------RMHMGCEPDRASYNIMVDAYGRAG 332
Y L S + G EP+ +YN+++ A R G
Sbjct: 1480 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 1519
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RKYGLPPSAVVYNSYIDGLLK 201
E+L+ P+ TY LL ++ G +K + +EM R G P+ V YN I GL +
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMIN--LYGKASKSFMALKLFNEMRSHKCKPNI 259
G+ ++A E+ + M R + S+ TY +I L K L+L EM + P +
Sbjct: 1169 KGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQL--EMENEGIMPTV 1225
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------- 310
TY A+++ + GL E A+ F +++ G+ PDV YN+L+ Y +
Sbjct: 1226 VTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD 1285
Query: 311 --HMGCEPDRASYNIMVDAYGRAG 332
G P +YNI++D Y R G
Sbjct: 1286 LRRAGLAPTVLTYNILIDGYCRLG 1309
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + K A+ ++++ + P TY L+ A+C GLL +A +F M
Sbjct: 1405 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 1464
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PSAV + I + GN A F++M + +P+ TY ++I+ + ++ +A
Sbjct: 1465 GLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 1524
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F+EM N TYT L++ + G E+A + ++ GI PD + AL++
Sbjct: 1525 SHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKG 1584
Query: 304 Y 304
+
Sbjct: 1585 F 1585
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C +G L+ A+ + +M GL P + Y I + G ++A +IF M
Sbjct: 1402 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D PS T+T++I+ Y + + A F +M +PN TY L++A R G
Sbjct: 1462 ISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRT 1521
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
+ A F ++ G+ + Y Y L+ +A R MH G PD ++ +
Sbjct: 1522 QLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKAL 1581
Query: 325 VDAY 328
+ +
Sbjct: 1582 LKGF 1585
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 75/206 (36%), Gaps = 49/206 (23%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ FREM +G+ P N + L + + M +PS TY +++ +
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129
Query: 235 ---GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE-------- 283
G+ K M LK E R C PN TY ++ R+G EEA E+ E
Sbjct: 1130 LKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188
Query: 284 --------------------------QLQGAGIEPDVYAYNALMEA-----------YRL 306
+++ GI P V YNA++ +
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
MG PD +YN +++ Y +AG
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAG 1274
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 240 SFMALKLFNEMRSHKCKPNI--CTYT--ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
S + L F EM SH P++ C L +A + +C EE+ E GIEP +
Sbjct: 1065 STLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLE----LGIEPSIV 1120
Query: 296 AYNALMEAY----------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
YN L++++ L+ M GC P+ +YN+++ R G
Sbjct: 1121 TYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKG 1170
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE L+++ +PT Y L+ YC +G LE A + F +M+ + P + YN+ I+
Sbjct: 174 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K A ++ M+ + P+ ET+ +I+ YG+ + + +EM+ + KP
Sbjct: 234 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 293
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LI 307
N+ +Y ++VNAF + G EA I + + + P+ YNA+++AY L+
Sbjct: 294 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 353
Query: 308 SRMHM-GCEPDRASYNIMV 325
+M G P +YN+++
Sbjct: 354 EKMKSNGISPSIVTYNLLI 372
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
A+ +E+ D+ PT +T+ L+ AY +G LEK V EM++ GL P+ V Y S +
Sbjct: 243 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 302
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ K G +AV I M P+ + Y +I+ Y + + A L +M+S+
Sbjct: 303 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 362
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA--YR--------L 306
P+I TY L+ + EAEEI L + PD +YN L+ A YR L
Sbjct: 363 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 422
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
RMH G + +Y+ ++ G AG
Sbjct: 423 QQRMHKYGIKSTVRTYHQLISGLGGAG 449
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAE 139
+ P H T++ LIN + R+ D ++ M + LI+AYG+ +K
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
E+ ++ P +Y ++ A+C +G + +A A+ +M + P+A VYN+ ID
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
++ G +A + ++MK + PS TY L+I S+ A ++ N + +H+ P+
Sbjct: 341 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 400
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLIS 308
+Y L++A G ++A ++ +++ GI+ V Y+ L+ Y
Sbjct: 401 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 460
Query: 309 RMHMGCEPDRASYNIMVDAYGRAG 332
M P A +NIMV+AY + G
Sbjct: 461 MMQNNVVPSNAIHNIMVEAYSKYG 484
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++LL C G + AE V + + GL P+ V+YN+ I+G + G + A F +M
Sbjct: 157 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 216
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P TY +IN KA + A L EM+ + P + T+ L++A+ R G
Sbjct: 217 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 276
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIM 324
E+ + ++Q G++P+V +Y +++ A+ L H P+ YN +
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 336
Query: 325 VDAYGRAG 332
+DAY G
Sbjct: 337 IDAYVEHG 344
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY++L +G + ++F + K G+ + ++GL K G
Sbjct: 110 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 169
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A E+ Q + P+ Y +IN Y + + A F +M+S KP+ TY
Sbjct: 170 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 229
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH-M 312
AL+N + A+++ ++Q G+ P V +N L++AY ++S M
Sbjct: 230 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 289
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ SY +V+A+ + G
Sbjct: 290 GLKPNVVSYGSIVNAFCKNG 309
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY ++ + G LE + +M +GL P+A+ YN + GL + G
Sbjct: 40 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 99
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTL-------------MINLYG--------------- 235
+ + M P TY++ M++L+G
Sbjct: 100 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 159
Query: 236 -------KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
K K +A ++ + + P Y L+N + + G E A F Q++
Sbjct: 160 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 219
Query: 289 GIEPDVYAYNALM----EAYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGK 337
I+PD YNAL+ +A R+ + + G P ++N ++DAYGR G E K
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE-K 278
Query: 338 CSYSLVEL 345
C L E+
Sbjct: 279 CFIVLSEM 286
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 176 VFREMRKYGLPP-SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ R M + G PP +A YN I G+ + G AVE+F M P+ TY MI+ +
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K +L ++M H KPN TY L++ R G E + +++ + PD
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 295 YAYNALMEA 303
+ Y+ L +
Sbjct: 121 FTYSILFDG 129
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ +G A VF EM + + P+ + YN+ IDG +KGG+ + +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M +P+ TY ++++ +A + L +EM S K P+ TY+ L + +R
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G + +F + G+ Y + L+ L S ++ G P R
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 321 YNIMVDAYGRAGLHEGKCS 339
YN +++ Y + G EG S
Sbjct: 193 YNTLINGYCQTGELEGAFS 211
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 50 YG-SGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF---DSLPPTHATWDDLINVSVQ 105
YG +G ++ F VLS + L+ V +I +AF +P A DD+ + V
Sbjct: 270 YGRTGQLEKCFIVLSEMQENGLK--PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV- 326
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAY 164
L + ++ I I+AY + + +A F +E + S I P+ TY LL+K
Sbjct: 327 LPNAQVYNAI----------IDAYVEHGPNDQA-FILVEKMKSNGISPSIVTYNLLIKGL 375
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C + +AE + + + L P AV YN+ I GN KA+++ QRM + + +
Sbjct: 376 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 435
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +I+ G A + L+ +M + P+ + +V A+++ G +AE++ ++
Sbjct: 436 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 495
Query: 285 L 285
+
Sbjct: 496 M 496
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 12/202 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y +++++ +P TY ++KA+C G + K + V EM K P+ YN++I GL
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLC 287
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G +A+E+ + M P TYTL+++ + K +S A +F M S PN
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
TYTAL++ F +EG EEA I +++ G++ +V YNA++ +A L + M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 311 HM-GCEPDRASYNIMVDAYGRA 331
M G EPD +YN+++D Y ++
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKS 429
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ + ++ K+A+ + + S P TY L+ + G +E+A + EM
Sbjct: 316 LLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITR 375
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL + V YN+ I G+ K G KA+ +F M +P T TY L+I+ Y K+ A
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKA 435
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM++ K P+ TY+ L++ ++A E+ +Q+ G++P+V+ Y L++A
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495
Query: 304 YRLISRMHMGCE-----------PDRASYNIMVDAYGRA 331
Y SR M E PD YN ++ RA
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK--AYCMSGLLEKAEAVFREMRK 182
LI + ++ +KA Y E+L + P Y L+ YC SG L +A +F EM
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P +Y IDG K GN +KA+ +F ++ S + +I+ + K K
Sbjct: 727 KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIE 785
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +LF++M K PNI TYT L++A+ + + EEAE++F ++ I P+ Y +L+
Sbjct: 786 ARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 845
Query: 303 AYRLI-SRMHM----------GCEPDRASYNIMVDAYGRAG 332
+Y I +R M G D +Y +M AY + G
Sbjct: 846 SYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 886
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
L ++ C P TY + C +G +++A V + M + GL P Y +DG K
Sbjct: 265 LSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQ 324
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A IF+ M P+ TYT +I+ + K AL++ +EM + K N+ TY
Sbjct: 325 KRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTY 384
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
A++ A+ G +A +F ++ AGIEPD + YN L++ Y M CE
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACE 437
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + Y SG ++ AE F++M G+ P+ V+Y I G GN +A+
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P Y+ +I+ K K+ A+ +F + P++ Y +L++ F +
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCK 673
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM------------EAYRLISRM-HMGCEPDR 318
EG E+A ++++++ GI P++ YN L+ EA++L M G PD
Sbjct: 674 EGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDG 733
Query: 319 ASYNIMVDAYGRAG 332
Y I++D G+ G
Sbjct: 734 YIYCILIDGCGKEG 747
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
IV + + +LI+ + +A T+ +L+ IP Y+ ++ + +G ++A
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
VF + K G+ P +YNS I G K G+ +KA +++ M + P+ Y +IN Y
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY 706
Query: 235 G--KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
G K+ A KLF+EM S P+ Y L++ +EG E+A +F + Q +
Sbjct: 707 GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-G 765
Query: 293 DVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ A+N+L +EA L M P+ +Y I++DAYG+A + E
Sbjct: 766 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 819
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 11/216 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY Q+S ++ A ++ + +P Y L+ C + +E+A+ + +M + G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A Y ++I+ K G Q A F+ M P+ YT++I + + AL
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F M P+I Y+A++++ ++ G +EA +F + G+ PDV+ YN+L+ +
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYG 329
+L M H G P+ YN +++ YG
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYG 707
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+L + P TY LL+ Y S + KA + EM+ L PS Y+ I
Sbjct: 399 KAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL + QKA E+ +M R+ +P+ Y +I Y + S+ MA++L M ++
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM---- 312
P++ Y L+ R EEA+ + + GI+P+ + Y A + Y + +
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578
Query: 313 -------GCEPDRASYNIMVDAYGRAG 332
G P+ Y I++ + G
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVG 605
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ Y + KA E+ + P+ TY++L+ C S L+KA V +M +
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRN 480
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ +Y + I ++ + A+E+ + M + P Y +I +A K A
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M KPN TY A +N +++ G + AE F+ + +GI P+ Y L++
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ + + G PD +Y+ ++ + + G
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ G++ +KA + E + + + + L+ ++C G + +A +F +M
Sbjct: 738 ILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK 796
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ V Y ID K ++A ++F M+ P+T TYT ++ Y + F
Sbjct: 797 KLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM 856
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ--LQGAGIEPDVY 295
+ LF +M + + Y + +A+ +EG EA ++ + ++G +E DV+
Sbjct: 857 ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 910
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+++ + +A + +++D + P TY +L+ AY + ++E+AE +F +M
Sbjct: 773 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 832
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + Y S + + GN K + +F+ M+ Y +M + Y K KS AL
Sbjct: 833 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 892
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
KL N+ K + AL+ +E E+ ++
Sbjct: 893 KLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 80 NTIWDAF---DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
N++ D+F + +DD+++ KK P ++ + LI+AYG+ + +
Sbjct: 771 NSLIDSFCKHGKVIEARELFDDMVD--------KKLTPNIVTYTI---LIDAYGKAEMME 819
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE +L++ IP TY LL +Y G K ++F++M G+ A+ Y
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA 879
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K G +A+++ + + + + + +I K + L+L +EM +
Sbjct: 880 SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELS 939
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ T L+ F + G +EA ++ +Q G P
Sbjct: 940 LSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 92/240 (38%), Gaps = 64/240 (26%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV-----------------VYNSYIDG 198
+Y++L C SGL+ +A+ + ++ + PP + V++ +ID
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181
Query: 199 LLKGGNPQKAVEIF---------------QRMKRDCCQ--------------------PS 223
G +A +F + RD + P
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
TYT +I + K + +EM +CKPN+ TY A + + G +EA E+ +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300
Query: 284 QLQGAGIEPDVYAYNALMEAY---------RLI--SRMHMGCEPDRASYNIMVDAYGRAG 332
+ G+ PD + Y L++ + +LI S G P+R +Y ++D + + G
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 16/221 (7%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E++ + C P E T+A ++A+C +GLL++A + +M KYG P ++Y++
Sbjct: 24 EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 83
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G + G +A+++ M C+P+T Y + A + +L EM C
Sbjct: 84 VNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 140
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---- 311
PN T++ L+N+ + L E A E+ EQ+Q G PDV +YN ++ + +R
Sbjct: 141 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 200
Query: 312 ----MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
M C+PD S+N ++ +A K Y VEL K
Sbjct: 201 LLKSMLCKPDTISFNAVLKCLCKA-----KRWYDAVELVAK 236
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C E T+ +L+ + C +G ++ A VF M KY P V Y+S I+G + G
Sbjct: 236 KMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG 295
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A ++F+ M C+ +Y + A++ A +L +M + C PN T+
Sbjct: 296 LDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFN 352
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--------MGCE 315
L+++ ++GL A +++EQ+ GI PD++ YNAL+ Y R+ M CE
Sbjct: 353 ILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE 412
Query: 316 PDRASYNIMVDAYGRA 331
PD SYN ++ RA
Sbjct: 413 PDTISYNSILKGLCRA 428
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 46/233 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG----- 198
E++ C P + T++ L+ + C + L+E A V +M+KYG P V YN+ I
Sbjct: 134 EMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQA 193
Query: 199 ---------------------------LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
L K AVE+ +M + C+ + T+ ++I
Sbjct: 194 RADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILI 253
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ + + A+++F M ++C P+I TY++L+N F+ +GL E A ++F +
Sbjct: 254 DSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA-- 311
Query: 292 PDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
D+++YNA + +A LI+ M C P+ ++NI++ + + GL
Sbjct: 312 -DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGL 363
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C+P E T+ +L+ + C GL+ +A V+ +M KYG+ P YN+ I+G + G
Sbjct: 338 DMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQG 397
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
A++ M C+P T +Y ++ +A + A KL EM C PN T+
Sbjct: 398 RLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ + GL ++A E+ + M R+ C P+ T+ I + + A+
Sbjct: 3 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +M + C P++ Y+ LVN F+ G +EA ++ + P+ YNA +
Sbjct: 63 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGL 119
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
E LI+ M C P+ A+++ ++++ + L E
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVE 161
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y LK CM+ + A + +M P+ V +N I L + G +A++++++M
Sbjct: 315 SYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQM 374
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P TY +IN Y + + ALK + M C+P+ +Y +++ R
Sbjct: 375 PKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERW 431
Query: 276 EEAEEIFEQLQGAGIEPD 293
++AE++ ++ P+
Sbjct: 432 KDAEKLVTEMLRKNCTPN 449
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + L K AEF E+ S P E TY+ L+ AY +G E A V +EM
Sbjct: 346 LLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASN 405
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A V++ + G QK+ ++ + M+ +P Y +MI+ +GK + A+
Sbjct: 406 VQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAM 465
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+ M S +P+ T+ L++ R G + AEE+FE++ G P +N ++ ++
Sbjct: 466 ATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSF 525
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
L++ M G P+ +Y ++D YG++G
Sbjct: 526 GDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSG 564
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 95/178 (53%), Gaps = 17/178 (9%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+AEA+F EMR GL P YN+ + G +K G + A + M+R P+ +TY+ +I
Sbjct: 323 EAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLI 382
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ YG A + A + EM + +PN ++ +++++ +G +++ ++ +++ +G+
Sbjct: 383 DAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVR 442
Query: 292 PDVYAYNALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
PD YN +++ + R++S G EPD ++N ++D + RAG H+
Sbjct: 443 PDRVFYNVMIDTFGKFNCLDHAMATFDRMLSE---GIEPDTVTWNTLIDCHCRAGKHD 497
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 11/227 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+AYG + A E+ S P ++ +L +Y G +K+ V REM
Sbjct: 380 FLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENS 439
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V YN ID K A+ F RM + +P T T+ +I+ + +A K A
Sbjct: 440 GVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRA 499
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF EM P T+ ++N+F + ++ + + ++ G+ P+ Y L++
Sbjct: 500 EELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDI 559
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCS 339
Y R + G +P YN +++AY + GL E S
Sbjct: 560 YGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVS 606
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ +Y K +K+ E+ +S P Y +++ + L+ A A F M G
Sbjct: 416 ILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEG 475
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +N+ ID + G +A E+F+ M P T+ +MIN +G +
Sbjct: 476 IEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVK 535
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L MRS PN TYT L++ + + G +A E + ++ AG++P YNAL+ AY
Sbjct: 536 NLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAY 595
Query: 305 --RLISRMHM---------GCEPDRASYNIMVDAYG 329
R +S + G +P + N +++A+G
Sbjct: 596 AQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFG 631
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + H +AE + E+++ P T+ +++ ++ + + + MR G
Sbjct: 486 LIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQG 545
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P++V Y + ID K G A+E MK +PS+ Y +IN Y + S A+
Sbjct: 546 LVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAV 605
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F MR KP++ +L+NAF + EA + + ++ ++PDV Y LM+A
Sbjct: 606 SAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKAL 665
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDA 327
+ + GC PDR + ++ A
Sbjct: 666 IRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSA 699
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 17/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ +I A G +AE + E+ D+ P Y LL+ Y +GLL+ AE V EM +
Sbjct: 309 VAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMER 368
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASK 239
G+ P+ Y+ ID G + A + + M+ QP+ ++ +++ Y G+ K
Sbjct: 369 SGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQK 428
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
SF L+ EM + +P+ Y +++ F + + A F+++ GIEPD +N
Sbjct: 429 SFQVLR---EMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNT 485
Query: 300 LME----------AYRLISR-MHMGCEPDRASYNIMVDAYG 329
L++ A L M G P ++NIM++++G
Sbjct: 486 LIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFG 526
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I ++G + + + +P TY L+ Y SG A +M+
Sbjct: 520 IMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAA 579
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS+ +YN+ I+ + G ++AV F+ M+ D +PS +IN +G+ + A
Sbjct: 580 GLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEA 639
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ + KP++ TYT L+ A R ++ ++E++ +G PD A L A
Sbjct: 640 FTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSA 699
Query: 304 YR 305
+
Sbjct: 700 LK 701
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI A GQ +A LL R T TY L+ A + LEKA + MR+
Sbjct: 173 ILIHALGQSEKLYEAF-----LLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQD 227
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAV--EIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P V Y+ I L++ A+ ++++ ++ D + + +I + KA
Sbjct: 228 GYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLS 287
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
AL+ ++ T A++ A G EAE IFE+++ G++P AYNAL+
Sbjct: 288 KALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALL 347
Query: 302 EAYR----------LISRMHM-GCEPDRASYNIMVDAYGRAGLHEG 336
Y ++S M G P+ +Y+ ++DAYG AG E
Sbjct: 348 RGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWES 393
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ + +G L KA ++ GL + I L G +A IF+ M+ +
Sbjct: 276 IIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNG 335
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P T Y ++ Y KA A + +EM PN TY+ L++A+ G E A
Sbjct: 336 LKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESAR 395
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAY 328
+ ++++ + ++P+ Y ++ ++ +YR L + G PDR YN+M+D +
Sbjct: 396 IVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTF 455
Query: 329 GR 330
G+
Sbjct: 456 GK 457
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C T+ L+K M G L +A +++ M + G P+ V YN+ I GL G+ ++A+
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M+R C P+ TY+++I+ + K+ A + +N M SH C+PN+ TYT +V+
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDR 318
+ + ++A + E++ G P+ +N ++ A +L+ RM GC P+
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 319 ASYNIMVDAYGRAGLHE 335
+YN ++DA R +E
Sbjct: 490 TTYNELLDALFRMNKYE 506
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C P Y L+ C +G LE+A V +M++ G P+ Y+ IDG K G+
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A E + RM C+P+ TYT M+++ K S A L +M C PN T+
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNT 459
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-G 313
+ G E A ++ E++QG G P++ YN L+ EA+ L +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 314 CEPDRASYNIMVDAYGRAGL 333
+P+ +YN ++ + RAG+
Sbjct: 520 LQPNLVTYNTVLYGFSRAGM 539
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 93/181 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + A T+ ++ C P TY ++ C + + ++A ++ +M
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N++I GL G + A+++ +RM+ C P+ TY +++ + +K A
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF E+ + +PN+ TY ++ F+R G+ EA ++F + G PD YN ++ A
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 304 Y 304
Y
Sbjct: 569 Y 569
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + A ++E+ + C P TY ++ + C +G ++ A + +
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-- 241
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PS VYN+ IDG+ K G + A+++ M + P+ +Y+ +IN + +A
Sbjct: 242 ---PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF +M C NI T+T L+ G EA ++++ + G EP+V AYN L+
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA ++ +M GC P+ +Y+I++D + ++G
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL K + L R P+ Y L+ C G +E A + EM G+ P+ V Y
Sbjct: 223 SLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ I+ L GN + A +F +M C + T+T +I K + AL L+ M
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------- 304
C+PN+ Y L++ G EEA ++ +Q+Q +G P+V Y+ L++ +
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 305 ------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
R+IS GC P+ +Y MVD + + + + SLVE
Sbjct: 403 ASETWNRMISH---GCRPNVVTYTCMVDVLCKNSMFDQ--ANSLVE 443
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
ED + ++ Y G E+A +F + ++G P+ +YN +D LL Q ++
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
MK+D P+ TY +++ K + A KLF EM + C P+ TYT +V++ + G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR-MHMGCEPDRASYN 322
++A E+ +P V YNAL++ A +L+ M G +P+ SY+
Sbjct: 229 KIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 323 IMVDAYGRAG 332
++++ +G
Sbjct: 284 CIINSLCVSG 293
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D I + I +I Y + ++A + + + C PT Y LL A
Sbjct: 101 KMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF 160
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ ++ M+K GL P+ YN + L K A ++F M C P TYT M
Sbjct: 161 QMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTM 220
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
++ KA K A +L + + KP++ Y AL++ +EG E A ++ ++ G+
Sbjct: 221 VSSLCKAGKIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275
Query: 291 EPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDA-YGRAGLHEG 336
+P+V +Y+ ++ A+ L ++M + GC+ + ++ ++ + R L+E
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ + S+ +A ++ C P T+ +K C +G +E A + M+ +G
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN +D L + ++A +FQ ++ QP+ TY ++ + +A AL
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALM-- 301
+LF + P+ TY +++A+ ++G + A ++ E++ PD+ Y +L+
Sbjct: 545 QLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604
Query: 302 --------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAGLHEG 336
EA + + ++ G P+ A++N +V + + H G
Sbjct: 605 ACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY ++++ ++ + + ++M+ G+ ++ I+G + G+ ++A+++F
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
R+ C+P+ Y +++ +K M L+ M+ PN+ TY L+ A +
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYN 322
+ A ++F ++ G PD Y ++ +A L R +P YN
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF----KPSVPVYN 248
Query: 323 IMVDAYGRAGLHEGKCSYSLVELSVK 348
++D G C +E+++K
Sbjct: 249 ALID---------GMCKEGRIEVAIK 265
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + TY++ + C G +E+A +F ++ G+ + V+Y + IDG K G A
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYS 530
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ +RM D C P++ TY ++I K K A L +M + KP + TYT L+
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRA 319
++G + A ++F + G +PDV Y A + AY +I++M+ G PD
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLV 650
Query: 320 SYNIMVDAYGRAGL 333
+Y +++D Y R GL
Sbjct: 651 TYTVLIDGYARLGL 664
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 116 VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
+LMS LLI+ + + YLELL+++ P T+ ++ YC G + +AE
Sbjct: 165 ILMSLSKFLLID---------EMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
++ + GL P Y S I G + A E+F M + CQ + +YT +I+
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+A + ALKLF +M C P + TYT L+ A + G EA +F +++ G EP+V+
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 296 AYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
Y L+ EA +++S M G P +YN ++D Y + G+
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE +++ + P TY L+ +C + ++ A VF M + G + V Y + I
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL + G +A+++F M D C P+ TYT++I + + AL LFNEM+ C+
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN+ TYT L++ +E +EA ++ ++ G+ P V YNAL+ +A+ +
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 307 ISRMHMG-CEPDRASYNIMV 325
+ M C P+ +YN ++
Sbjct: 392 LDLMESNSCGPNTRTYNELI 411
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 46/230 (20%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C P TY +L+ C +++A + EM + GL PS V YN+ IDG K G
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A EI M+ + C P+T TY +I K K A+ L N+M K P++ TY
Sbjct: 384 MIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYN 443
Query: 264 AL-----------------------------------VNAFAREGLCEEAEEIFEQLQGA 288
+L ++ +EG EEA +F+ ++
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDA 327
G++ + Y AL++ AY L+ RM + C P+ +YN++++
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ + C PT TY +L+ A SG +A +F EM++ G P+ Y IDGL K
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A ++ M PS TY +I+ Y K A ++ + M S+ C PN T
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRT 406
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y L+ ++ +A + ++ + P + YN+L+ AYRL+S M+
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
G PD+ +Y++ +D + G
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEG 488
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y ++ + A F L+L++S C P TY L+ C + KA A+ +M +
Sbjct: 375 LIDGYCKEGMIDDA-FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L PS + YNS I G K + + A + M + P TY++ I+ K + A
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF+ +++ K N YTAL++ + + G + A + E++ P+ Y YN L+
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+++M MG +P +Y I++ + G
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L+ + P+ TY L+ C LE A + M + GL P Y+ +ID L K G
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F +K + + YT +I+ Y K K +A L M + C PN TY
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ +E +EA + ++ G++P V Y L+ A ++ + M +
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G +PD +Y + AY G+ E
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLE 631
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L AY G+LE+ + V +M + G+ P V Y IDG + G +A +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 212 FQRMKRDCCQPSTETYTLMI-NL----------------------------YGKASKSFM 242
+ M C+PS +++I NL K + +
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEI 731
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
ALKLF +M H C ++ Y AL+ F ++ EEA+ + ++ G+ P YN+L+
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMV 325
EA RL+ M G P SY ++V
Sbjct: 792 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 94/251 (37%), Gaps = 40/251 (15%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIE ++ K+A ++L PT TY +L+ G + A VF M
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y +++ G ++ ++ +M + P TYT++I+ Y + + A
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE-------------------------- 277
M CKP++ + L+ + E +E
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLE 728
Query: 278 ---AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNI 323
A ++FE++ G DV Y AL+ EA L+ M G P YN
Sbjct: 729 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 788
Query: 324 MVDAYGRAGLH 334
++D + G++
Sbjct: 789 LLDCCCKLGVY 799
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ C Y L+ +C LE+A+ + M++ G+ PS +YNS +D K G
Sbjct: 738 KMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLG 797
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMI-NLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+AV + M + P E+Y L++ LY + S A +F+ + S + +
Sbjct: 798 VYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE-KAKAVFHGLLSCGYNYDEVAW 856
Query: 263 TALVNAFAREGLCEEAEEIFEQLQ 286
L++ + L +E E+ + ++
Sbjct: 857 KVLIDGLLKRDLVDECSELIDIME 880
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ ++ + SG ++ A + M G P+ V Y+S + GL K G +A
Sbjct: 216 CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 275
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ QRM R C P+ TY +I+ + K + A L EM C+PN+ TYT L++AF
Sbjct: 276 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 335
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
+ G E+A + E + G P+++ YN+L++ + +L+S M GC P+
Sbjct: 336 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 395
Query: 319 ASYNIMVDAYGRAG-LHEG 336
SYN ++ +A +HEG
Sbjct: 396 VSYNTVIAGLCKATKVHEG 414
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ LL C +G L++A A+ + M + G P+ V YN+ IDG K G +A
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M CQP+ TYT++++ + K K+ A+ L M PN+ TY +L++ F
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDR 318
++ E A ++ + G P+V +YN ++ +++H G C PD
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430
Query: 319 ASYNIMVDA 327
++N ++DA
Sbjct: 431 VTFNTIIDA 439
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D C P TY +LL A+C G E A + M + G P+ YNS +D K
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 374
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A ++ M + C P+ +Y +I KA+K + L +M S+ C P+I T+
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--H 311
+++A + + A E+F +Q +G P++ YN+L+ +A L+ M
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494
Query: 312 MGCEPDRASYNIMVDAYGRA 331
GC PD +YN ++D ++
Sbjct: 495 QGCSPDIITYNTVIDGLCKS 514
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++ S L+ A + EM G P+ YN+ + G K + A+
Sbjct: 40 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 99
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M C P +YT +IN K + A ++ ++M C+PN+ TY LV+ F
Sbjct: 100 WLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM--GCEPD 317
R G + A E+ ++ G P+ YN +M A +L M C PD
Sbjct: 160 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPD 219
Query: 318 RASYNIMVDAYGRAGLHEGKC 338
+Y+ +VD+ ++G + C
Sbjct: 220 VFTYSTIVDSLVKSGKVDDAC 240
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 47/226 (20%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNP 205
+S C P TY L+ C S ++AE + REM RK G P + YN+ IDGL K
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMIN----------------------------LYGKA 237
+A ++F +M D P TY+++I+ YG
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 577
Query: 238 SKSFM-------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
F AL++ + S P++ T++ ++ ++ G +A E+ E + AG+
Sbjct: 578 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637
Query: 291 EPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMV 325
PD YN L++ + SR GCEPD A+Y +V
Sbjct: 638 VPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 47/236 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D+ P +Y +L +C + +E A + +M G PP V Y + I+GL K
Sbjct: 69 EMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLD 128
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMIN------------------------------- 232
+A + +M + CQP+ TY +++
Sbjct: 129 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 188
Query: 233 --LYGKAS--KSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
++G S K AL+LF EM S C P++ TY+ +V++ + G ++A + E +
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS 248
Query: 288 AGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G P+V Y++L+ EA L+ RM GC P+ +YN ++D + + G
Sbjct: 249 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+L++L P + TY++++ + C +++A V M K G P A+ Y + IDG K
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN KA+EI Q + P T+++ I+ K + A +L M P+ T
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y L+ F E+A ++FE ++ G EPD Y L+
Sbjct: 644 YNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + +K ++A ++ C+P +Y ++ C + + + + +M
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V +N+ ID + K A E+F ++ C P+ TY +++ K+ + A
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L EM R C P+I TY +++ + + A ++F Q+ G+ PD Y+ ++
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 545
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
EA ++ M G +P +Y ++D + + G + + LS YP
Sbjct: 546 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 604
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 91 PTHATWDDLINVSVQLRLNKK----WDPIVLMSCVS-----ILLIEAYGQKSLHKKAEFT 141
PT T++ LIN V+ R +K D + L + +++ Y KA F
Sbjct: 623 PTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA-FE 681
Query: 142 YLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y L + + + TY LLKA C SG ++ A AV +EM +P ++ VYN IDG
Sbjct: 682 YFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 741
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ +A ++ Q+MK++ +P TYT I+ KA A + EM + KPNI
Sbjct: 742 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 801
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
TYT L+ +AR L E+A +E+++ G++PD Y+ L+ + L+SR
Sbjct: 802 TYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTS--LLSR 848
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A+C + +E+AEA+ REM + G+ +Y++ +DG + +K + +F+R+K
Sbjct: 418 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLK 477
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ TY +INLY K K AL++ M+ K N+ TY+ ++N F +
Sbjct: 478 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 537
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A +FE + G++PDV YN ++ A+
Sbjct: 538 NAFAVFEDMVKEGMKPDVILYNNIIAAF 565
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 106/207 (51%), Gaps = 12/207 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++++ + A AVF +M K G+ P ++YN+ I GN +A++ + M
Sbjct: 522 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEM 581
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ +P+T T+ +IN + K+ +L++F+ MR C P + T+ AL+N +
Sbjct: 582 QKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQM 641
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI----------SRM-HMGCEPDRASYNIM 324
E+A EI +++ AG+ + + Y +M+ Y + +R+ + G E D +Y +
Sbjct: 642 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEAL 701
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ A ++G + + + E+S ++ P
Sbjct: 702 LKACCKSGRMQSALAVT-KEMSARNIP 727
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+PT T+ L+ +EKA + EM G+ + Y + G G+ KA
Sbjct: 621 CVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 680
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E F R++ + + TY ++ K+ + AL + EM + N Y L++ +
Sbjct: 681 EYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW 740
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
AR G EA ++ +Q++ G++PD++ Y + + A + I M +G +P+
Sbjct: 741 ARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNI 800
Query: 319 ASYNIMVDAYGRAGLHEGKCS 339
+Y ++ + RA L E S
Sbjct: 801 KTYTTLIKGWARASLPEKALS 821
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
T E+ R PT T+ ++ + SG + ++ VF MR+ G P+ +N+ I+GL+
Sbjct: 577 TVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLV 636
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ +KAVEI M + TYT ++ Y + A + F +++ + +I
Sbjct: 637 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIF 696
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
TY AL+ A + G + A + +++ I + + YN L+ EA LI +M
Sbjct: 697 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 756
Query: 311 HM-GCEPDRASYNIMVDAYGRAG 332
G +PD +Y + A +AG
Sbjct: 757 KKEGVKPDIHTYTSFISACSKAG 779
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y + KK + L + PT TY L+ Y G + KA V R M++ G
Sbjct: 456 MMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 515
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + Y+ I+G +K + A +F+ M ++ +P Y +I + A+
Sbjct: 516 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAI 575
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ EM+ + +P T+ ++N FA+ G + E+F+ ++ G P V+ +NAL+
Sbjct: 576 QTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGL 635
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A ++ M + G + +Y ++ Y G
Sbjct: 636 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 674
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++K Y G + +A F MR G+ P++ +Y S I G + ++A+
Sbjct: 308 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSC 367
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + S TY++++ + KA + A F+E + N Y ++ A +
Sbjct: 368 VRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQ 427
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRAS 320
E AE + +++ GI+ + Y+ +M+ Y +++ G P +
Sbjct: 428 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVT 487
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV--ELSVKH 349
Y +++ Y + G S V E VKH
Sbjct: 488 YGCLINLYTKVGKISKALEVSRVMKEEGVKH 518
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+++ YG++ +A T+ + PT Y L+ AY + +E+A + R+M++
Sbjct: 315 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEE 374
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S V Y+ + G K GN + A F KR + Y +I + + A
Sbjct: 375 GIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 434
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM I Y +++ + ++ +F++L+ G P V Y L+
Sbjct: 435 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINL 494
Query: 304 YRLISRMHMGCEPDRA-----------SYNIMVDAY 328
Y + ++ E R +Y++M++ +
Sbjct: 495 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 530
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G N Q + F+++ + PS + LM+ YG+ A + F MR+ P
Sbjct: 292 GDNWQAVISAFEKINK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 347
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
YT+L++A+A EEA +++ GIE + Y+ ++ +
Sbjct: 348 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGF 390
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y +++ GLL+K VF EM G+ + VY + I+ + G ++
Sbjct: 132 CKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASL 191
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ MK++ PS TY +IN + + L LF EMR +P++ TY L+ A
Sbjct: 192 ELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGA 251
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PD 317
A GL +EAE +F + +GI PD+ Y+ L++ + ++R+ E PD
Sbjct: 252 CAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPD 311
Query: 318 RASYNIMVDAYGRAG 332
SYN++++AY G
Sbjct: 312 ITSYNVLLEAYAELG 326
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ + +LE+ S P TY +L++ + G ++ +F +M +
Sbjct: 352 VLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEE 411
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ Y I KGG + A +I M PS++ YT +I +G+A+ A
Sbjct: 412 NVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEA 471
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +FN M P + TY + ++AFAR GL +EAE I ++ +G++ DV+++N +++A
Sbjct: 472 LVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKA 531
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRAGL 333
+R + CEP+ + +++ Y AGL
Sbjct: 532 FRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGL 572
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+ + ++R ++ P V+ L+ A + L +AE + + +S +P +
Sbjct: 223 WEGLLGLFAEMR-HEGIQPDVITYNT---LLGACAHRGLGDEAEMVFRTMNESGIVPDIN 278
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L++ + LEK + REM G P YN ++ + G+ ++A+++F++M
Sbjct: 279 TYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQM 338
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C + TY++++NLYGK + +F EM+ P+ TY L+ F G
Sbjct: 339 QAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYF 398
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+E +F + +EP++ Y L+ +A +++ M+ G P +Y +
Sbjct: 399 KEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGV 458
Query: 325 VDAYGRAGLHE 335
++A+G+A L+E
Sbjct: 459 IEAFGQAALYE 469
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ L++ A+ L + + +P+ Y +++A+ + L E+A VF M + G
Sbjct: 423 LIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVG 482
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS+I +GG ++A I RM + ++ +I + + + A+
Sbjct: 483 SNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAV 542
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
K + EM C+PN T +++ + GL +E+EE F++++ +GI P V Y
Sbjct: 543 KSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALY 602
Query: 298 ---NALMEAYRLISRM 310
+ L +AY LI M
Sbjct: 603 AKNDRLNDAYNLIDEM 618
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 12/224 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G++ L K + E+ + T Y ++ AY +G + + M++
Sbjct: 141 IMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQE 200
Query: 184 GLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ PS + YN+ I+ +GG + + + +F M+ + QP TY ++
Sbjct: 201 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDE 260
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +F M P+I TY+ LV F + E+ E+ +++ G PD+ +YN L+E
Sbjct: 261 AEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLE 320
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
AY + + GC + A+Y+++++ YG+ G ++
Sbjct: 321 AYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYD 364
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
+ +AL+ K + G +++ +F+ M R+ P+ +Y I L + G K E+F
Sbjct: 101 NDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFD 160
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M + + YT +IN YG+ + +L+L N M+ + P+I TY ++NA AR G
Sbjct: 161 EMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGG 220
Query: 274 L-CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASY 321
L E +F +++ GI+PDV YN L+ EA + M+ G PD +Y
Sbjct: 221 LDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTY 280
Query: 322 NIMVDAYGR 330
+ +V +G+
Sbjct: 281 SYLVQTFGK 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 38/236 (16%)
Query: 104 VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA 163
+ L +N+K IV S +IEA+GQ +L+++A + + + PT +TY + A
Sbjct: 439 ILLHMNEK--GIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHA 496
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+ GL ++AEA+ M + GL +N I +GG ++AV+ + M++ C+P+
Sbjct: 497 FARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPN 556
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA----- 278
T +++++Y A + + F E+++ P++ Y ++ +A+ +A
Sbjct: 557 ELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLID 616
Query: 279 -------------------------------EEIFEQLQGAGIEPDVYAYNALMEA 303
E +F++L G + YNAL+EA
Sbjct: 617 EMITMRVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEA 672
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S CIP TY L+ +C S + A VF ++ G P V Y+ IDGL K G
Sbjct: 79 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 138
Query: 204 NPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A+++F RM K C P+T TY +I+ + + K A+ L M P++ TY
Sbjct: 139 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 198
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------ 312
T L+N F + ++A ++ Q+ G+ P+V + +LM+ RL +H+
Sbjct: 199 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRR 258
Query: 313 -GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
C P +YN ++D Y R E + L E+
Sbjct: 259 KSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 19/254 (7%)
Query: 91 PTHATWDDLIN-VSVQLRLNKKWD---PIVLMSCVSIL-----LIEAYGQKSLHKKAEFT 141
PT T++ LI+ + R ++ +D +V C+ + LI + + A
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLL 200
+ +L+ P TY+ L+ C G L++A +F M K G P+ V YNS I G
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G +A+ + +RM P TYT ++N + K ++ A L N+M PN+
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM---------H 311
T+T+L++ RE +A I +++ P VY YN +++ Y ++++
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291
Query: 312 MGCEPDRASYNIMV 325
M C P+ S+NIM+
Sbjct: 292 MDCPPNVVSFNIMI 305
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C L+ A + +M + GL P+ V + S +DGL + AV I
Sbjct: 193 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHI 252
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+R C P+ TY +++ Y + ++ A K E C PN+ ++ ++ +
Sbjct: 253 LGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCK 310
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--HMGCEPDRA 319
EA E+ E+ + PDV Y ++ EA R+ +M GC P+
Sbjct: 311 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSI 370
Query: 320 SYN 322
+Y+
Sbjct: 371 TYS 373
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C T+ L+K M G L +A +++ M + G P+ V YN+ I GL G+ ++A+
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M+R C P+ TY+++I+ + K+ A + +N M SH C+PN+ TYT +V+
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDR 318
+ + ++A + E++ G P+ +N ++ A +L+ RM GC P+
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 319 ASYNIMVDAYGRAGLHE 335
+YN ++DA R +E
Sbjct: 490 TTYNELLDALFRMNKYE 506
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C P Y L+ C +G LE+A V +M++ G P+ Y+ IDG K G+
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A E + RM C+P+ TYT M+++ K S A L +M C PN T+
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNT 459
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-G 313
+ G E A ++ E++QG G P++ YN L+ EA+ L +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 314 CEPDRASYNIMVDAYGRAGL 333
+P+ +YN ++ + RAG+
Sbjct: 520 LQPNLVTYNTVLYGFSRAGM 539
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 93/181 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + A T+ ++ C P TY ++ C + + ++A ++ +M
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + +N++I GL G + A+++ +RM+ C P+ TY +++ + +K A
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF E+ + +PN+ TY ++ F+R G+ EA ++F + G PD YN ++ A
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 304 Y 304
Y
Sbjct: 569 Y 569
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + A ++E+ + C P TY ++ + C +G ++ A + +
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-- 241
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PS VYN+ IDG+ K G + A+++ M + P+ +Y+ +IN + +A
Sbjct: 242 ---PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF +M C NI T+T L+ G EA ++++ + G EP+V AYN L+
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA ++ +M GC P+ +Y+I++D + ++G
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL K + L R P+ Y L+ C G +E A + EM G+ P+ V Y
Sbjct: 223 SLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ I+ L GN + A +F +M C + T+T +I K + AL L+ M
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------- 304
C+PN+ Y L++ G EEA ++ +Q+Q +G P+V Y+ L++ +
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 305 ------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
R+IS GC P+ +Y MVD + + + + SLVE
Sbjct: 403 ASETWNRMISH---GCRPNVVTYTCMVDVLCKNSMFDQ--ANSLVE 443
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
ED + ++ Y G E+A +F + ++G P+ +YN +D LL Q ++
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
MK+D P+ TY +++ K + A KLF EM + C P+ TYT +V++ + G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR-MHMGCEPDRASYN 322
++A E+ +P V YNAL++ A +L+ M G +P+ SY+
Sbjct: 229 KIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 323 IMVDAYGRAG 332
++++ +G
Sbjct: 284 CIINSLCVSG 293
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D I + I +I Y + ++A + + + C PT Y LL A
Sbjct: 101 KMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF 160
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ ++ M+K GL P+ YN + L K A ++F M C P TYT M
Sbjct: 161 QMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTM 220
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
++ KA K A +L + + KP++ Y AL++ +EG E A ++ ++ G+
Sbjct: 221 VSSLCKAGKIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275
Query: 291 EPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDA-YGRAGLHEG 336
+P+V +Y+ ++ A+ L ++M + GC+ + ++ ++ + R L+E
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ + S+ +A ++ C P T+ +K C +G +E A + M+ +G
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN +D L + ++A +FQ ++ QP+ TY ++ + +A AL
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALM-- 301
+LF + P+ TY +++A+ ++G + A ++ E++ PD+ Y +L+
Sbjct: 545 QLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604
Query: 302 --------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAGLHEG 336
EA + + ++ G P+ A++N +V + + H G
Sbjct: 605 ACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY ++++ ++ + + ++M+ G+ ++ I+G + G+ ++A+++F
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
R+ C+P+ Y +++ +K M L+ M+ PN+ TY L+ A +
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYN 322
+ A ++F ++ G PD Y ++ +A L R +P YN
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF----KPSVPVYN 248
Query: 323 IMVDAYGRAGLHEGKCSYSLVELSVK 348
++D G C +E+++K
Sbjct: 249 ALID---------GMCKEGRIEVAIK 265
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C E T+ +L+ + C GL+ A VF +M KY P V Y+S I+G + G
Sbjct: 439 QMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQG 498
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+E+FQ M C+P +Y ++ +A++ A +L M C PN T+
Sbjct: 499 LVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFN 555
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--------MGCE 315
L+N+ ++G + A E+F+Q+ G PD++ YNAL+ + R+ M C+
Sbjct: 556 ILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK 615
Query: 316 PDRASYNIMVDAYGRA 331
PD SYN + RA
Sbjct: 616 PDAISYNSTLKGLCRA 631
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KAE E++ + C P E T+A ++++C +GLL+ A + M +YG P V+Y++
Sbjct: 227 EKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTL 286
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G + G A+ + M C+P+T Y + A + +L EM C
Sbjct: 287 VNGFSEQGRVDDALVLLNTM---LCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDC 343
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---- 311
PN T++ L + + GL + A E+ EQ+Q G PDV YN L+ + R+
Sbjct: 344 PPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALM 403
Query: 312 ----MGCEPDRASYNIMVDAYGR 330
M C PD S+N + A R
Sbjct: 404 LLDSMLCNPDTISFNAALKALCR 426
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P E T+++L C GL++ A V +M+KYG P V+YN+ I+ + G
Sbjct: 337 EMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQG 396
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + M C P T ++ + + + + +L +M C T+
Sbjct: 397 RVDDALMLLDSM---LCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFN 453
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR---LISR-----MHMGCE 315
L+++ + GL A E+FEQ+ PD+ Y++L+ + L+ M C+
Sbjct: 454 ILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK 513
Query: 316 PDRASYNIMVDAYGRAGLHE 335
PD SYN ++ RA E
Sbjct: 514 PDIFSYNAVLKGLCRAARWE 533
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ Q L A + ++ RC P TY+ L+ + GL+E A +F+ M
Sbjct: 454 ILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM--- 510
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P YN+ + GL + + A E+ M R C P+ T+ ++IN + + A
Sbjct: 511 PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRA 570
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+++F +M + P+I TY AL+N F+ +G ++A + + +PD +YN+ +
Sbjct: 571 IEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDAISYNSTLKG 627
Query: 302 --------EAYRLISRM-HMGCEPDRASY 321
EA +++ M C P+ ++
Sbjct: 628 LCRAERWKEAEEIVAEMLRKKCPPNEVTF 656
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ YC SG L A + M + P YN+ + GL +KA E+ + M
Sbjct: 180 TYTALINGYCRSGRLADALNLIASM---PVAPDTYTYNTVLKGLCGAKQWEKAEELMEEM 236
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R+ C P+ T+ I + + A++L M + C P++ Y+ LVN F+ +G
Sbjct: 237 IRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRV 296
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
++A + + +P+ YNA ++ LI+ M C P+ A+++++
Sbjct: 297 DDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSML 353
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKH 349
+ GL + C+ +VE K+
Sbjct: 354 TSCLCQHGLVD--CAMEVVEQMQKY 376
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 32/117 (27%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG------------------------- 184
C P E T+ +L+ + C G ++A VF++M +YG
Sbjct: 547 CPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDAL 606
Query: 185 -------LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
P A+ YNS + GL + ++A EI M R C P+ T+ L+
Sbjct: 607 NLLSTMSCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYANQLF 663
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 51/186 (27%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L+K C L AE V +++ G AV +N+ + G + G A + + K
Sbjct: 115 ILIKKLCAHRRLADAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERVLEAAK-- 171
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+ G A N+ TYTAL+N + R G +A
Sbjct: 172 --------------VSGAA--------------------NVVTYTALINGYCRSGRLADA 197
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
+ + + PD Y YN ++ +A L+ M C P+ ++ + +
Sbjct: 198 LNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRS 254
Query: 328 YGRAGL 333
+ + GL
Sbjct: 255 FCQNGL 260
>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
Length = 757
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LL+ A + + A L+ + S + P E T A L+ AY + + ++A +FR M
Sbjct: 150 LLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPD 209
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+P +A+ YN+ + +L G A I+ M D P TY +I +G K
Sbjct: 210 LGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 269
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+++F EM+ H P++ TY AL+NA+ R G E A ++F+++ G GIE + +YN +++
Sbjct: 270 AVRVFGEMKGHGVTPDVTTYNALLNAWVRTGDLESARKVFDEMTGKGIERNSVSYNVMIK 329
Query: 303 AY 304
Y
Sbjct: 330 GY 331
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AYG+ ++ ++A + + D T +Y +LKA G A ++ M G
Sbjct: 187 LISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADG 246
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ I G + AV +F MK P TY ++N + + A
Sbjct: 247 VAPDVSTYNTLIWGFGLCKKMETAVRVFGEMKGHGVTPDVTTYNALLNAWVRTGDLESAR 306
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+F+EM + N +Y ++ + EEA +F ++ G+ + ALM
Sbjct: 307 KVFDEMTGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGEKGLRLSEKTFAALM 363
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G KAE FR++ K G+ A +NS I G K G P+ A EI M
Sbjct: 474 YNPVIEHLCSNGSTTKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEILAIMT 532
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R E++ L+++ + K ++ A + M H P+ + +++ A +G +
Sbjct: 533 RREVPTDPESHVLLVDSFLKKNEPADAKTALDSMMQHGHLPSPALFKSVMEALFNDGRIQ 592
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
A + + + G+ ++ + ++EA L +R H+ E N+MV+
Sbjct: 593 TASRVMKSMIEKGVTENMDMAHKILEA--LFTRGHV--EEAIGRVNLMVE 638
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M P T +I+ YG+A+ A+KLF M +Y A++ A
Sbjct: 168 VLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAIL 227
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
G A I+ + G+ PDV YN L+ + L +M G PD
Sbjct: 228 CRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGEMKGHGVTPDVT 287
Query: 320 SYNIMVDAYGRAG 332
+YN +++A+ R G
Sbjct: 288 TYNALLNAWVRTG 300
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y K ++A F+Y E++ +P+ TY LL+ A M G + +A+ + +EMRK
Sbjct: 338 LIDGYCNKGDLERA-FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P A+ YN I+G + GN +KA ++ M +P+ TYT +I + + ++ A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF ++ P++ + A+V+ G E A + +++ + PD +N LM
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+ M G +PD SYN ++ YGR G
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 556
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++ ++A + ++++ +P TY L+ YC G LE+A + EM K G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS YN + L G +A ++ + M++ P TY ++IN Y + + A
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
L NEM S +P TYT+L+ +R +EA+++FE++ G+ PDV +NA+++
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A+ L+ M PD ++N ++ R G
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 521
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ R T T+ +++ C G L+KA M G P+ V YN+ I G
Sbjct: 215 YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 274
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN + A I M+ +P + TY +I+ K + A LF++M PN T
Sbjct: 275 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 334
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----------- 310
Y L++ + +G E A +++ GI P V YN L+ A + RM
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G PD +YNI+++ Y R G
Sbjct: 395 KKGIIPDAITYNILINGYSRCG 416
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + KKA + E+L PT TY L+ +++A+ +F ++
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P +++N+ +DG GN ++A + + M R P T+ ++ + K A
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L +EM+ KP+ +Y L++ + R G ++A + +++ G P + YNAL++
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYG 329
A L+ M + G PD ++Y +++ G
Sbjct: 587 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 131 QKSLHKKAEFT-YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
+ L K EF ++E L + P +Y ++ Y G +E A + MR G+ P +
Sbjct: 240 EGKLKKAREFIGFMEGLGFK--PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 297
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
Y S I G+ K G ++A +F +M P+ TY +I+ Y A +E
Sbjct: 298 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 357
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
M P++ TY LV+A EG EA+++ ++++ GI PD YN L+ Y
Sbjct: 358 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 412
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LL + G + + F L L R + + + LL++ C ++A F M++
Sbjct: 126 LLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKE 185
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P N + LK + A ++ M R + T+ +M+N+ K K
Sbjct: 186 KGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKK 245
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A + M KPN+ +Y +++ ++ G E A I + ++ GIEPD Y Y +L+
Sbjct: 246 AREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 305
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA L +M +G P+ +YN ++D Y G E SY
Sbjct: 306 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 354
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +T +L + +E A ++ EM + + + +N ++ L K G +KA E
Sbjct: 189 VPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE 248
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
M+ +P+ +Y +I+ Y A ++ + MR +P+ TY +L++
Sbjct: 249 FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 308
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLIS-RMHM---GCEPDRA 319
+EG EEA +F+++ G+ P+ YN L++ Y R S R M G P +
Sbjct: 309 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 368
Query: 320 SYNIMVDAY---GRAG 332
+YN++V A GR G
Sbjct: 369 TYNLLVHALFMEGRMG 384
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE + E++ +P Y L+ +C G + A F EM + P + Y + I
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G + G+ +A ++F M +P + T+T +IN Y KA A ++ N M C
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 896
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN+ TYT L++ +EG + A E+ ++ G++P+++ YN+++ EA +L
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 956
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ G D +Y ++DAY ++G
Sbjct: 957 VGEFEAAGLNADTVTYTTLMDAYCKSG 983
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + K A + ++ + C P TY L+ C G L+ A + EM K G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YNS ++GL K GN ++AV++ + T TYT +++ Y K+ + A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM +P I T+ L+N F G+ E+ E++ + GI P+ +N+L++ Y
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRA 331
+ + + G PD +Y +V + +A
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 11/228 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V LI+ + ++ + A + E+ P TY ++ +C G + +A +F
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM GL P +V + I+G K G+ + A + M + C P+ TYT +I+ K
Sbjct: 854 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A +L +EM +PNI TY ++VN + G EEA ++ + + AG+ D Y
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 299 ALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
LM+AY L + G +P ++N++++ + G+ E
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ ++ YC G L+K + M++ GL P++ +Y S I L + +A E
Sbjct: 722 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M R P T YT +I+ + K A K F EM S P++ TYTA+++ F +
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EA ++F ++ G+EPD + L+ +A+R+ + M GC P+ +
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 902 YTTLIDGLCKEG 913
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ YC +G ++ A V M + G P+ V Y + IDGL K G+ A E+
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + QP+ TY ++N K+ A+KL E + + TYT L++A+ +
Sbjct: 922 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G ++A+EI +++ G G++P + +N LM + +L++ M G P+ +
Sbjct: 982 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041
Query: 321 YNIMVDAY 328
+N +V Y
Sbjct: 1042 FNSLVKQY 1049
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +++ C G +++A + M G P + Y++ ++G + G K ++ + M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR +P++ Y +I L + K A + F+EM P+ YT L++ F + G
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
A + F ++ I PDV Y A++ EA +L M G EPD ++ +
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 325 VDAYGRAG 332
++ Y +AG
Sbjct: 871 INGYCKAG 878
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + KA+ E+L PT T+ +L+ +C+ G+LE E + M G
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A +NS + N + A I++ M P +TY ++ + KA A
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 1094
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF EM+ ++ TY+ L+ F + EA E+F+Q++ G+ D ++ +
Sbjct: 1095 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 1154
Query: 305 RLISRMHMGCEP-DRASYNIMVDAYGRAG 332
R +P D N +VD R
Sbjct: 1155 YKGKRPDTIVDPIDEIIENYLVDEQLRGA 1183
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ AYC SG ++KA+ + +EM GL P+ V +N ++G G + ++ M
Sbjct: 971 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T+ ++ Y + A ++ +M S P+ TY LV +
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+EA +F++++G G V Y+ L++ +
Sbjct: 1091 KEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTET 226
GLL +A VF +M YGL S N Y+ L K A+ +F+ + +
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 691
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y ++I+ + + A L M P++ +Y+ +VN + R G ++ ++ E ++
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++P+ Y Y +++ EA S M G PD Y ++D + + G
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 11/171 (6%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A VFRE + G+ + YN I + + G ++A + M+ P +Y+ ++N
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y + + KL M+ KPN Y +++ R EAEE F ++ GI P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 293 DVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
D Y L++ + + MH PD +Y ++ + + G
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 843
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KK LE+ + +PT TY ++ SGL+E A+ F EMR GL P + YNS
Sbjct: 1207 KKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSL 1266
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G K GN ++A+ +F ++R P+ TY ++I+ Y + A L EM C
Sbjct: 1267 LNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGC 1326
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYR 305
PN+CTYT L+ A E F+++ G++PD +AYN + A+
Sbjct: 1327 LPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFE 1386
Query: 306 LISRMHM-GCEPDRASYNIMVDAYGRAG 332
L + + G D +YNI++ + G
Sbjct: 1387 LREVLMLEGISSDTVTYNILIHGLCKTG 1414
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RKYGLPPSAVVYNSYIDGLLK 201
E+L+ P+ TY LL ++ G +K + +EM R G P+ V YN I GL +
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMIN--LYGKASKSFMALKLFNEMRSHKCKPNI 259
G+ ++A E+ + M R + S+ TY +I L K L+L EM + P +
Sbjct: 1169 KGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQL--EMENEGIMPTV 1225
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------- 310
TY A+++ + GL E A+ F +++ G+ PDV YN+L+ Y +
Sbjct: 1226 VTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD 1285
Query: 311 --HMGCEPDRASYNIMVDAYGRAG 332
G P +YNI++D Y R G
Sbjct: 1286 LRRAGLAPTVLTYNILIDGYCRLG 1309
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 75/206 (36%), Gaps = 49/206 (23%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ FREM +G+ P N + L + + M +PS TY +++ +
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129
Query: 235 ---GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE-------- 283
G+ K M LK E R C PN TY ++ R+G EEA E+ E
Sbjct: 1130 LKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188
Query: 284 --------------------------QLQGAGIEPDVYAYNALMEA-----------YRL 306
+++ GI P V YNA++ +
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
MG PD +YN +++ Y +AG
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAG 1274
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 240 SFMALKLFNEMRSHKCKPNI--CTYT--ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
S + L F EM SH P++ C L +A + +C EE+ E GIEP +
Sbjct: 1065 STLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLE----LGIEPSIV 1120
Query: 296 AYNALMEAY----------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
YN L++++ L+ M GC P+ +YN+++ R G
Sbjct: 1121 TYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKG 1170
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 24/275 (8%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQL-----------RLNKKWDPIVLMSCVSILLIEA 128
+ +W + P +D L NV V L ++NK + SC +L
Sbjct: 168 DMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELL--HR 225
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+ S A + +++ + P+ TY +++ G LE A ++F EM+ GL P
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V YNS IDG K G AV +F+ MK C+P TY +IN + K + A + +
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLH 345
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------- 301
M+ +PN+ TY+ L++AF + G+ EA + F + G++P+ + Y +L+
Sbjct: 346 GMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG 405
Query: 302 ---EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA++L S M G + +Y ++D G
Sbjct: 406 DLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDG 440
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 87/180 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ + A + E+ D+ C P TY L+ +C + +A M++ G
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ ID K G +A + F M R QP+ TYT +I+ K A
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL +EM+ NI TYTAL++ +G EAEE+F L AG + Y +L Y
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGY 471
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L Y + + +KA E+ P Y + C +E + AV REM G
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L ++ +Y + ID K G +AV + Q M+ + + TY ++I+ K A+
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F+ M + +PNI YTAL++ + EEA+ +F ++ GI PD Y +L+
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L +RM +G E D +Y ++ + R G
Sbjct: 647 MKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYG 685
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + ++AE + LL + + Y L Y + ++EKA + EM K
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P ++Y + I GL + + ++ + + M ++ YT +I+ Y K K+ A+
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L EM+ K + TY L++ + GL ++A F+ + G++P++ Y AL+
Sbjct: 552 NLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGL 611
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L + M G PD+ Y ++D + G
Sbjct: 612 CKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 6/230 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + + +A +++++ P E TY L+ A C G L +A + EM++ G
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + +DGL + G ++A E+F + + + + YT + + Y KA A+
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM KP++ Y + R+ E++ + ++ G+ + Y Y L++AY
Sbjct: 482 DILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAY 541
Query: 305 RLISR----MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+ + +++ E I V YG L +G C LV+ +V+++
Sbjct: 542 FKVGKTTEAVNLLQEMQDLGIKITVVTYGV--LIDGLCKIGLVQQAVRYF 589
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY + +A E+ D T TY +L+ C GL+++A F M + G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ ++Y + IDGL K ++A +F M P YT +I+ K AL
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEAL 656
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L N M + ++C YT+L+ F+R G + A+ + +++ GI PD L+ Y
Sbjct: 657 SLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKY 716
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F YL + R + P TY+ L+ A+C +G+L +A F +M + GL P+ Y S ID
Sbjct: 341 FEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDA 400
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K G+ +A ++ M++ + TYT +++ + + A +LF + N
Sbjct: 401 NCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLN 460
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLIS 308
YT+L + + + + E+A +I E++ ++PD+ Y N + ++ +I
Sbjct: 461 QQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIR 520
Query: 309 R-MHMGCEPDRASYNIMVDAYGRAG 332
M G + Y ++DAY + G
Sbjct: 521 EMMDCGLTANSYIYTTLIDAYFKVG 545
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P V+++ + L+ G ++A + F +M + P + +++ K+SK +AL
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
F +M P++ TY ++ AREG E A +FE+++ G+ PD+ YN+
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNS------- 291
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
++D YG+ G+ G S
Sbjct: 292 -----------------LIDGYGKVGMLTGAVS 307
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + L ++ ++ + C P YA ++ C G LE A + M YG
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ + GL ++A E+ M + C T+ ++++ + + +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +M SH C P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A L+S+M GC P+ ++N +++ + GL E
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C +G AE + +M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ V +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ A +REG + ++F+ ++ I D YNA++
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y +++ GL
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+AE E+ C + T+ +L+ +C +GL+++ + +M +G P + Y +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A +L ++M C
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A R G
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREG 545
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K L ++A ++L + C P +Y+ ++ +G E+A + M G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y+S L + G K +++F +K + Y +I+ K ++ A+
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
F M S+ C PN TYT L+ A EGL +EA+E+ +L G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+LD C P Y ++L+A C SG + V M G N ++
Sbjct: 131 LEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNA 190
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ + G +AV + +++ C+ +Y ++ A + +L +EM C PN
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
I T+ L+ R GL E E+ Q+ G PD+ Y +++ A +++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 309 RM-HMGCEPDRASYNIMVDAYGRA 331
RM G +P+ YN ++ A
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSA 334
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G + A R +PP+A + + GL G A+E+ M
Sbjct: 82 YNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P Y +++ ++ ++++ M + C + ++NA +G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
EA + +L G E D+ +YNA+++ + R + + C P+ ++N ++
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 259 GYLCRNGLFE 268
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 79/192 (41%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +++ C G + A V EM G P +Y+ ++ + G + +V +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C T L++N + A+ L ++ C+ +I +Y A++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+ EE+ +++ P++ +N L+ + ++++M GC PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 289 YATIIDGICKEG 300
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE L+++ +PT Y L+ YC +G LE A + F +M+ + P + YN+ I+
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K A ++ M+ + P+ ET+ +I+ YG+ + + +EM+ + KP
Sbjct: 419 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 478
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LI 307
N+ +Y ++VNAF + G EA I + + + P+ YNA+++AY L+
Sbjct: 479 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 538
Query: 308 SRMHM-GCEPDRASYNIMV 325
+M G P +YN+++
Sbjct: 539 EKMKSNGISPSIVTYNLLI 557
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
A+ +E+ D+ PT +T+ L+ AY +G LEK V EM++ GL P+ V Y S +
Sbjct: 428 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 487
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ K G +AV I M P+ + Y +I+ Y + + A L +M+S+
Sbjct: 488 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 547
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA--YR--------L 306
P+I TY L+ + EAEEI L + PD +YN L+ A YR L
Sbjct: 548 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 607
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
RMH G + +Y+ ++ G AG
Sbjct: 608 QQRMHKYGIKSTVRTYHQLISGLGGAG 634
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAE 139
+ P H T++ LIN + R+ D ++ M + LI+AYG+ +K
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
E+ ++ P +Y ++ A+C +G + +A A+ +M + P+A VYN+ ID
Sbjct: 466 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 525
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
++ G +A + ++MK + PS TY L+I S+ A ++ N + +H+ P+
Sbjct: 526 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 585
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR---------- 309
+Y L++A G ++A ++ +++ GI+ V Y+ L+ R
Sbjct: 586 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 645
Query: 310 -MHMGCEPDRASYNIMVDAYGRAG 332
M P A +NIMV+AY + G
Sbjct: 646 MMQNNVVPSNAIHNIMVEAYSKYG 669
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++LL C G + AE V + + GL P+ V+YN+ I+G + G + A F +M
Sbjct: 342 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 401
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P TY +IN KA + A L EM+ + P + T+ L++A+ R G
Sbjct: 402 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 461
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E+ + ++Q G++P+V +Y +++ EA ++ M H P+ YN +
Sbjct: 462 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 521
Query: 325 VDAYGRAG 332
+DAY G
Sbjct: 522 IDAYVEHG 529
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY++L +G + ++F + K G+ + ++GL K G
Sbjct: 295 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 354
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A E+ Q + P+ Y +IN Y + + A F +M+S KP+ TY
Sbjct: 355 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 414
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH-M 312
AL+N + A+++ ++Q G+ P V +N L++AY ++S M
Sbjct: 415 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 474
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ SY +V+A+ + G
Sbjct: 475 GLKPNVVSYGSIVNAFCKNG 494
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 155 DTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPP-SAVVYNSYIDGLLKGGNPQKAVEI 211
DT+A ++A +G L +A + R M + G PP +A YN I G+ + G AVE+
Sbjct: 163 DTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 222
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ TY MI+ + K +L ++M H KPN TY L++ R
Sbjct: 223 FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCR 282
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G E + +++ + PD + Y+ L +
Sbjct: 283 AGRMGETSALLDEMASQKMVPDGFTYSILFDG 314
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY ++ + G LE + +M +GL P+A+ YN + GL + G
Sbjct: 225 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 284
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTL-------------MINLYG--------------- 235
+ + M P TY++ M++L+G
Sbjct: 285 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 344
Query: 236 -------KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
K K +A ++ + + P Y L+N + + G E A F Q++
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404
Query: 289 GIEPDVYAYNALM----EAYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGK 337
I+PD YNAL+ +A R+ + + G P ++N ++DAYGR G E K
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE-K 463
Query: 338 CSYSLVEL 345
C L E+
Sbjct: 464 CFIVLSEM 471
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ +G A VF EM + + P+ + YN+ IDG +KGG+ + +
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M +P+ TY ++++ +A + L +EM S K P+ TY+ L + +R
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G + +F + G+ Y + L+ L S ++ G P R
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377
Query: 321 YNIMVDAYGRAGLHEGKCS 339
YN +++ Y + G EG S
Sbjct: 378 YNTLINGYCQTGELEGAFS 396
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 50 YG-SGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF---DSLPPTHATWDDLINVSVQ 105
YG +G ++ F VLS + L+ V +I +AF +P A DD+ + V
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLK--PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV- 511
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAY 164
L + ++ I I+AY + + +A F +E + S I P+ TY LL+K
Sbjct: 512 LPNAQVYNAI----------IDAYVEHGPNDQA-FILVEKMKSNGISPSIVTYNLLIKGL 560
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C + +AE + + + L P AV YN+ I GN KA+++ QRM + + +
Sbjct: 561 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 620
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +I+ G A + L+ +M + P+ + +V A+++ G +AE++ ++
Sbjct: 621 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 680
Query: 285 L 285
+
Sbjct: 681 M 681
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE L+++ +PT Y L+ YC +G LE A + F +M+ + P + YN+ I+
Sbjct: 355 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 414
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K A ++ M+ + P+ ET+ +I+ YG+ + + +EM+ + KP
Sbjct: 415 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 474
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LI 307
N+ +Y ++VNAF + G EA I + + + P+ YNA+++AY L+
Sbjct: 475 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 534
Query: 308 SRMHM-GCEPDRASYNIMV 325
+M G P +YN+++
Sbjct: 535 EKMKSNGISPSIVTYNLLI 553
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
A+ +E+ D+ PT +T+ L+ AY +G LEK V EM++ GL P+ V Y S +
Sbjct: 424 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 483
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ K G +AV I M P+ + Y +I+ Y + + A L +M+S+
Sbjct: 484 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 543
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA--YR--------L 306
P+I TY L+ + EAEEI L + PD +YN L+ A YR L
Sbjct: 544 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 603
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAG 332
RMH G + +Y+ ++ G AG
Sbjct: 604 QQRMHKYGIKSTVRTYHQLISGLGGAG 630
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAE 139
+ P H T++ LIN + R+ D ++ M + LI+AYG+ +K
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
E+ ++ P +Y ++ A+C +G + +A A+ +M + P+A VYN+ ID
Sbjct: 462 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 521
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
++ G +A + ++MK + PS TY L+I S+ A ++ N + +H+ P+
Sbjct: 522 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 581
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----AYRLIS------- 308
+Y L++A G ++A ++ +++ GI+ V Y+ L+ A RLI
Sbjct: 582 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQK 641
Query: 309 RMHMGCEPDRASYNIMVDAYGRAG 332
M P A +NIMV+AY + G
Sbjct: 642 MMQNNVVPSNAIHNIMVEAYSKYG 665
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++LL C G + AE V + + GL P+ V+YN+ I+G + G + A F +M
Sbjct: 338 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 397
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P TY +IN KA + A L EM+ + P + T+ L++A+ R G
Sbjct: 398 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 457
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E+ + ++Q G++P+V +Y +++ EA ++ M H P+ YN +
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 517
Query: 325 VDAYGRAG 332
+DAY G
Sbjct: 518 IDAYVEHG 525
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY++L +G + ++F + K G+ + ++GL K G
Sbjct: 291 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDG 350
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A E+ Q + P+ Y +IN Y + + A F +M+S KP+ TY
Sbjct: 351 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 410
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH-M 312
AL+N + A+++ ++Q G+ P V +N L++AY ++S M
Sbjct: 411 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 470
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ SY +V+A+ + G
Sbjct: 471 GLKPNVVSYGSIVNAFCKNG 490
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 47/248 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY ++ + G LE ++ +M +GL P+A+ YN + GL + G
Sbjct: 221 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAG 280
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTL-------------MINLYGKA------------- 237
+ + M P TY++ M++L+GK+
Sbjct: 281 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCS 340
Query: 238 ---------SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
K +A ++ + + P Y L+N + + G E A F Q++
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400
Query: 289 GIEPDVYAYNALM----EAYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGK 337
I+PD YNAL+ +A R+ + + G P ++N ++DAYGR G E K
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE-K 459
Query: 338 CSYSLVEL 345
C L E+
Sbjct: 460 CFIVLSEM 467
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 155 DTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPP-SAVVYNSYIDGLLKGGNPQKAVEI 211
DT+A ++A +G L +A + R M + G PP +A YN I G+ + G AVE+
Sbjct: 159 DTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 218
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ TY MI+ + K L ++M H KPN TY L++ R
Sbjct: 219 FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCR 278
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G E + +++ + PD + Y+ L +
Sbjct: 279 AGRMGETSALLDEMASQKMVPDGFTYSILFDG 310
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ +G A VF EM + + P+ + YN+ IDG +KGG+ + +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M +P+ TY ++++ +A + L +EM S K P+ TY+ L + +R
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G + +F + G+ Y + L+ L S ++ G P R
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373
Query: 321 YNIMVDAYGRAGLHEGKCS 339
YN +++ Y + G EG S
Sbjct: 374 YNTLINGYCQTGELEGAFS 392
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 50 YG-SGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF---DSLPPTHATWDDLINVSVQ 105
YG +G ++ F VLS + L+ V +I +AF +P A DD+ + V
Sbjct: 451 YGRTGQLEKCFIVLSEMQENGLK--PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV- 507
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAY 164
L + ++ I I+AY + + +A F +E + S I P+ TY LL+K
Sbjct: 508 LPNAQVYNAI----------IDAYVEHGPNDQA-FILVEKMKSNGISPSIVTYNLLIKGL 556
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C + +AE + + + L P AV YN+ I GN KA+++ QRM + + +
Sbjct: 557 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 616
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +I+ G A + L+ +M + P+ + +V A+++ G +AE++ ++
Sbjct: 617 RTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 676
Query: 285 L 285
+
Sbjct: 677 M 677
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + L ++ ++ + C P YA ++ C G LE A + M YG
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ + GL ++A E+ M + C T+ ++++ + + +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +M SH C P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A L+S+M GC P+ ++N +++ + GL E
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C +G AE + +M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ V +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ A +REG + ++F+ ++ I D YNA++
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y +++ GL
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+AE E+ C + T+ +L+ +C +GL+++ + +M +G P + Y +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A +L ++M C
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A R G
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREG 545
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K L ++A ++L + C P +Y+ ++ +G E+A + M G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y+S L + G K +++F +K + Y +I+ K ++ A+
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
F M S+ C PN TYT L+ A EGL +EA+E+ +L G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+LD C P Y ++L+A C SG + V M G N ++
Sbjct: 131 LEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNA 190
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ + G +AV + +++ C+ +Y ++ A + +L +EM C PN
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
I T+ L+ R GL E E+ Q+ G PD+ Y +++ A +++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 309 RM-HMGCEPDRASYNIMVDAYGRA 331
RM G +P+ YN ++ A
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSA 334
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G + A R +PP+A + + GL G A+E+ M
Sbjct: 82 YNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P Y +++ ++ ++++ M + C + ++NA +G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
EA + +L G E D+ +YNA+++ + R + + C P+ ++N ++
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 259 GYLCRNGLFE 268
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 79/192 (41%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +++ C G + A V EM G P +Y+ ++ + G + +V +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C T L++N + A+ L ++ C+ +I +Y A++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+ EE+ +++ P++ +N L+ + ++++M GC PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 289 YATIIDGICKEG 300
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + L ++ ++ + C P YA ++ C G LE A + M YG
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ + GL ++A E+ M + C T+ ++++ + + +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +M SH C P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A L+S+M GC P+ ++N +++ + GL E
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C +G AE + +M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ V +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ A +REG + ++F+ ++ I D YNA++
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y +++ GL
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+AE E+ C + T+ +L+ +C +GL+++ + +M +G P + Y +
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A +L ++M C
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A R G
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREG 545
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K L ++A ++L + C P +Y+ ++ +G E+A + M G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y+S L + G K +++F +K + Y +I+ K ++ A+
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
F M S+ C PN TYT L+ A EGL +EA+E+ +L G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+LD C P Y ++L+A C SG + V M G N ++
Sbjct: 131 LEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNA 190
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ + G +AV + +++ C+ +Y ++ A + +L +EM C PN
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
I T+ L+ R GL E E+ Q+ G PD+ Y +++ A +++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 309 RM-HMGCEPDRASYNIMVDAYGRA 331
RM G +P+ YN ++ A
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSA 334
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G + A R +PP+A + + GL G A+E+ M
Sbjct: 82 YNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P Y +++ ++ ++++ M + C + ++NA +G +
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
EA + +L G E D+ +YNA+++ + R + + C P+ ++N ++
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 259 GYLCRNGLFE 268
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 79/192 (41%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +++ C G + A V EM G P +Y+ ++ + G + +V +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C T L++N + A+ L ++ C+ +I +Y A++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+ EE+ +++ P++ +N L+ + ++++M GC PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 289 YATIIDGICKEG 300
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 12/202 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y +++++ +P TY ++KA+C G + K + V EM K P+ YN++I GL
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLC 287
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G +A+E+ + M P TYTL+++ + K +S A +F M S PN
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
TYTAL++ F +EG EEA I +++ G++ +V YNA++ +A L + M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 311 HM-GCEPDRASYNIMVDAYGRA 331
M G EPD +YN+++D Y ++
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKS 429
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + K+A +L+ L + +P Y L+ +C G +EKA ++ EM G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ VVYN+ I+GL K G KA E+F ++ P TY+ +I+ Y K+ A
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
KLF+EM S P+ Y L++ +EG E+A +F + Q + + A+N+L
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSF 810
Query: 301 ------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+EA L M P+ +Y I++DAYG+A + E
Sbjct: 811 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 852
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ + ++ K+A+ + + S P TY L+ + G +E+A + EM
Sbjct: 316 LLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITR 375
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL + V YN+ I G+ K G KA+ +F M +P T TY L+I+ Y K+ A
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKA 435
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM++ K P+ TY+ L++ ++A E+ +Q+ G++P+V+ Y L++A
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495
Query: 304 YRLISRMHMGCE-----------PDRASYNIMVDAYGRA 331
Y SR M E PD YN ++ RA
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+ + +P TY+ ++ YC SG L +A +F EM G+ P +Y I
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K GN +KA+ +F ++ S + +I+ + K K A +LF++M K
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLT 832
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI-SRMHM--- 312
PNI TYT L++A+ + + EEAE++F ++ I P+ Y +L+ +Y I +R M
Sbjct: 833 PNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISL 892
Query: 313 -------GCEPDRASYNIMVDAYGRAG 332
G D +Y +M AY + G
Sbjct: 893 FKDMEARGIACDAIAYGVMASAYCKEG 919
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + + AE + ++L S +P Y +L+K +C G +A + F+ M + G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y++ I L K G ++A+ +F + + P Y +I+ + K A
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----- 299
+L++EM + PNI Y L+N + G +A E+F++++ + PDV Y+
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741
Query: 300 -----LMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L EA++L M G PD Y I++D G+ G
Sbjct: 742 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
L ++ C P TY + C +G +++A V + M + GL P Y +DG K
Sbjct: 265 LSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQ 324
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A IF+ M P+ TYT +I+ + K AL++ +EM + K N+ TY
Sbjct: 325 KRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTY 384
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
A++ A+ G +A +F ++ AG+EPD + YN L++ Y M CE
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACE 437
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 10/228 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
IV + + +LI+ + +A T+ +L+ IP Y+ ++ + +G ++A
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
VF + K G+ P +YNS I G K G+ +KA +++ M + P+ Y +IN
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A +LF+E+ P++ TY+ +++ + + G EA ++F+++ GI PD
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766
Query: 295 YAYNALME----------AYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y Y L++ A L +++N ++D++ + G
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHG 814
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY + Y SG ++ AE F++M G+ P+ V+Y I G GN +A+
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P Y+ +I+ K K+ A+ +F + P++ Y +L++ F +
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCK 673
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
EG E+A ++++++ GI P++ YN L+ + + E PD +
Sbjct: 674 EGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVT 733
Query: 321 YNIMVDAYGRAG 332
Y+ ++D Y ++G
Sbjct: 734 YSTIIDGYCKSG 745
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY Q+S ++ A ++ + +P Y L+ C + +E+A+ + +M + G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A Y ++I+ K G Q A F+ M P+ YT++I + + AL
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F M P+I Y+A++++ ++ G +EA +F + G+ PDV+ YN+L+ +
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L M H G P+ YN +++ + G
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+L + P TY LL+ Y S + KA + EM+ L PS Y+ I
Sbjct: 399 KAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL + QKA E+ +M R+ +P+ Y +I Y + S+ MA++L M ++
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM---- 312
P++ Y L+ R EEA+ + + GI+P+ + Y A + Y + +
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578
Query: 313 -------GCEPDRASYNIMVDAYGRAG 332
G P+ Y I++ + G
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVG 605
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ Y + KA E+ + P+ TY++L+ C S L+KA V +M +
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRN 480
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ +Y + I ++ + A+E+ + M + P Y +I +A K A
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M KPN TY A +N +++ G + AE F+ + +GI P+ Y L++
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ + + G PD +Y+ ++ + + G
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ G++ +KA + E + + + + L+ ++C G + +A +F +M
Sbjct: 771 ILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK 829
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ V Y ID K ++A ++F M+ P+T TYT ++ Y + F
Sbjct: 830 KLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM 889
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ--LQGAGIEPDVY 295
+ LF +M + + Y + +A+ +EG EA ++ + ++G +E DV+
Sbjct: 890 ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 943
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+++ + +A + +++D + P TY +L+ AY + ++E+AE +F +M
Sbjct: 806 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 865
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + Y S + + GN K + +F+ M+ Y +M + Y K KS AL
Sbjct: 866 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 925
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
KL N+ K + AL+ +E E+ ++
Sbjct: 926 KLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 966
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 80 NTIWDAF---DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
N++ D+F + +DD+++ KK P ++ + LI+AYG+ + +
Sbjct: 804 NSLIDSFCKHGKVIEARELFDDMVD--------KKLTPNIVTYTI---LIDAYGKAEMME 852
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE +L++ IP TY LL +Y G K ++F++M G+ A+ Y
Sbjct: 853 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA 912
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K G +A+++ + + + + + +I K + L+L +EM +
Sbjct: 913 SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELS 972
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ T L+ F + G +EA ++ +Q G P
Sbjct: 973 LSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 92/240 (38%), Gaps = 64/240 (26%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV-----------------VYNSYIDG 198
+Y++L C SGL+ +A+ + ++ + PP + V++ +ID
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181
Query: 199 LLKGGNPQKAVEIF---------------QRMKRDCCQ--------------------PS 223
G +A +F + RD + P
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
TYT +I + K + +EM +CKPN+ TY A + + G +EA E+ +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300
Query: 284 QLQGAGIEPDVYAYNALMEAY---------RLI--SRMHMGCEPDRASYNIMVDAYGRAG 332
+ G+ PD + Y L++ + +LI S G P+R +Y ++D + + G
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y K ++A F+Y E++ +P+ TY LL+ A M G + +A+ + +EMRK
Sbjct: 360 LIDGYCNKGDLERA-FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P A+ YN I+G + GN +KA ++ M +P+ TYT +I + + ++ A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF ++ P++ + A+V+ G E A + +++ + PD +N LM
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+ M G +PD SYN ++ YGR G
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 578
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++ ++A + ++++ +P TY L+ YC G LE+A + EM K G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS YN + L G +A ++ + M++ P TY ++IN Y + + A
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
L NEM S +P TYT+L+ +R +EA+++FE++ G+ PDV +NA+++
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A+ L+ M PD ++N ++ R G
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 543
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ R T T+ +++ C G L+KA M G P+ V YN+ I G
Sbjct: 237 YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 296
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN + A I M+ +P + TY +I+ K + A LF++M PN T
Sbjct: 297 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 356
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----------- 310
Y L++ + +G E A +++ GI P V YN L+ A + RM
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G PD +YNI+++ Y R G
Sbjct: 417 KKGIIPDAITYNILINGYSRCG 438
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + KKA + E+L PT TY L+ +++A+ +F ++
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P +++N+ +DG GN ++A + + M R P T+ ++ + K A
Sbjct: 489 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L +EM+ KP+ +Y L++ + R G ++A + +++ G P + YNAL++
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYG 329
A L+ M + G PD ++Y +++ G
Sbjct: 609 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 134 LHKKAEFT-YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
L K EF ++E L + P +Y ++ Y G +E A + MR G+ P + Y
Sbjct: 265 LKKAREFIGFMEGLGFK--PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 322
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
S I G+ K G ++A +F +M P+ TY +I+ Y A +EM
Sbjct: 323 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 382
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P++ TY LV+A EG EA+++ ++++ GI PD YN L+ Y
Sbjct: 383 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 434
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LL + G + + F L L R + + + LL++ C ++A F M++
Sbjct: 148 LLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKE 207
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P N + LK + A ++ M R + T+ +M+N+ K K
Sbjct: 208 KGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKK 267
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A + M KPN+ +Y +++ ++ G E A I + ++ GIEPD Y Y +L+
Sbjct: 268 AREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 327
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA L +M +G P+ +YN ++D Y G E SY
Sbjct: 328 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +T +L + +E A ++ EM + + + +N ++ L K G +KA E
Sbjct: 211 VPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE 270
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
M+ +P+ +Y +I+ Y A ++ + MR +P+ TY +L++
Sbjct: 271 FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 330
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLIS-RMHM---GCEPDRA 319
+EG EEA +F+++ G+ P+ YN L++ Y R S R M G P +
Sbjct: 331 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 390
Query: 320 SYNIMVDAY---GRAG 332
+YN++V A GR G
Sbjct: 391 TYNLLVHALFMEGRMG 406
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD R P TY+ ++ A C + ++KA V M K G
Sbjct: 210 VINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 269
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YNS + G G P++A+ ++M+ D +P+ TY ++N K + A
Sbjct: 270 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEAR 329
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M +P+I TY L+ +A +G E + + + GI+PD + +N L+ AY
Sbjct: 330 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 389
Query: 305 R----------LISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ S+M G P+ Y ++D ++G
Sbjct: 390 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 428
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ + G +KA + + EM + P+ V Y+S I L K KA+E+
Sbjct: 202 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEV 261
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P TY +++ Y + + A+ +MRS +PN+ TY +L+N +
Sbjct: 262 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCK 321
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHM--------GCEPDRAS 320
G C EA +IF+ + G+EPD+ Y L++ Y + MH G +PD
Sbjct: 322 NGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 381
Query: 321 YNIMVDAYGR 330
+NI++ AY +
Sbjct: 382 FNILICAYAK 391
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSYIDGLLKGGNPQ 206
C+P + +LLK C ++A + M R G PP V Y + I+G K G+
Sbjct: 162 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 221
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA + M P+ TY+ +I KA A+++ N M + P+ TY +++
Sbjct: 222 KAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 281
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ + G +EA ++++ G+EP+V Y +LM EA ++ M G E
Sbjct: 282 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLE 341
Query: 316 PDRASYNIMVDAYGRAG 332
PD A+Y ++ Y G
Sbjct: 342 PDIATYRTLLQGYATKG 358
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ Y K+A T ++ P TY L+ C +G +A +F M K G
Sbjct: 280 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRG 339
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + + G G + + M R+ QP + ++I Y K K A+
Sbjct: 340 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 399
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+F++MR H PN+ Y +++ + G ++A FE
Sbjct: 400 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 438
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 136 KKAEFTYLELL----DSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
K+AE LELL DS+ C P +YA+++ + G ++KA +F EM G+ P+
Sbjct: 179 KRAE-EALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPN 237
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V Y + IDGL K +A +FQ+M +P +TY +I+ Y K +++
Sbjct: 238 VVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLE 297
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL-- 306
EM +H KP+ TY +L+N G C EA +F+ + GI+P+V Y L+ Y
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKG 357
Query: 307 -ISRMH--------MGCEPDRASYNIMVDAYGRAGL 333
+S MH G PD +NI+ AY + +
Sbjct: 358 ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + KA +LE++D P TY ++ C + ++++AE VF++M
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN I G L G ++ V + + M +P TY ++N + A
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF+ M KPN+ Y L++ +A +G E ++ + G+ PD + +N + A
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387
Query: 304 Y----RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
Y + MH+ G PD +Y ++DA + G
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLG 427
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + + +AE + +++D P DTY L+ Y G ++ + EM +G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S ++ L G ++A +F M R +P+ Y ++I+ Y
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L N M + P+ + + A+A++ + +EA IF +++ G+ PDV Y AL++A
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDAL 423
Query: 305 RLISR-----------MHMGCEPDRASYNIMV 325
+ R M+ G P+ +N +V
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY LL YC +G ++ A VFREM + G+ P V Y++ + GL +A E+
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M Q + Y +++N K + A KLF + S + I T+ ++ A +
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAY-----NALMEAY-----RLISRMH-MGCEPDRAS 320
G E+A +F + G+ PDV+ Y N + E Y L S M G P+
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSR- 729
Query: 321 YNIMVDAYGRAGLHEGKCS 339
M++A R LH G +
Sbjct: 730 ---MLNALVRRLLHRGDIT 745
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ P TY++L+ +C G LE A F + K G + +V N + GL +A
Sbjct: 89 KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148
Query: 209 VEIF-QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTA 264
++I +RM C P +Y ++ + ++ AL+L + M + C PN+ +Y
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISR--------MHMG 313
++N F EG ++A +F ++ GI+P+V Y +++ +++ R + G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +YN ++ Y G
Sbjct: 269 VKPDNDTYNCLIHGYLSIG 287
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 11/227 (4%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A F + ++ P Y +L+ Y G L + + M + GL P ++N
Sbjct: 325 REARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
K +A+ IF +MK+ P Y +I+ K + A+ FN+M +
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV 444
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
PNI + +LV E+A+E + ++ GI PDV +N + M+A R
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
LI M +G P SY ++ + G + V LSV P
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKP 551
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++ AY +K++ +A + ++ P Y L+ A C G ++ A F +M
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE 442
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFM 242
G+ P+ V+NS + GL +KA E + M +P + T++ NL K +
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG-QVMK 501
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +L + M +P + +YT L+ G +EA + + + G++PD + YN L+
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561
Query: 303 AYRLISRMHMGCEPDRASYNIMVDAYG------RAGLHEGKCSYSLV 343
Y C R DAYG R G+ G +YS +
Sbjct: 562 GY---------CRAGRID-----DAYGVFREMLRNGITPGVVTYSTI 594
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + A + ++++ P + L+ C EKA+ + EM G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +N+ + L G KA + M+R +P +YT +I + + A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K + M S KP+ TY L++ + R G ++A +F ++ GI P V Y+ ++
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 19/224 (8%)
Query: 128 AYGQKSLHK--KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
YG ++ K KA+ Y E+L+ P + +L C G + KA+ + M + G
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + Y + I G G +A + M +P TY +++ Y +A + A
Sbjct: 515 RPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
+F EM + P + TY+ +++ EA+E++ + +G + +++ YN ++
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634
Query: 302 ------EAYRLISRMHMGCEPD----RASYNIMVDAYGRAGLHE 335
EA++L + C D ++NIM+ A ++G +E
Sbjct: 635 KNNCVDEAFKLFQSL---CSKDFQLEITTFNIMIGALFKSGRNE 675
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 237 ASKSFMALKLFNEMRSH---KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
++S + + LFN M K P+ CTY+ L+ F R G E F + +G +
Sbjct: 69 TTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVN 128
Query: 294 VYAYNALM----EAYR-------LISRM-HMGCEPDRASYNIMVDAY 328
N L+ +A R L+ RM +GC PD SYN ++ +
Sbjct: 129 NIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGF 175
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +++L+K+A + E+ + P + T LL Y + ++A V +EM + G
Sbjct: 253 LISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PPS V YNS I +K G ++A ++ + M+ +P TYT +++ +A K A+
Sbjct: 313 CPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAI 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+NEM + CKPN+CTY AL+ G E +F++++ AG PDV +N L+
Sbjct: 373 GTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVF 432
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
E + M G P+R +Y ++ +Y R GL +
Sbjct: 433 GQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 474
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI A + S + A + ++ + P TY ++L Y + ++ A+ MRK
Sbjct: 182 LISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSMRKD 241
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+P YN+ I + ++A ++F M+ +P T ++++YGKA + A
Sbjct: 242 GIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEA 301
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + EM C P++ TY +L++++ ++GL EEA ++ E+++ GIEPDV Y L+
Sbjct: 302 IGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSG 361
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ + GC+P+ +YN ++ +G G
Sbjct: 362 LDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRG 401
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 114/270 (42%), Gaps = 56/270 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +GQ L + + E+ S +P DTY L+ +Y GL ++A +++ M + G
Sbjct: 428 LLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 487
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK----- 239
+ P YN+ + L +GG ++A ++F M+ +P +Y+ +++ Y A K
Sbjct: 488 IHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMK 547
Query: 240 ------------SFMAL------------------KLFNEMRSHKCKPNICTYTALVNAF 269
S L K F E+R +C +I A+++ +
Sbjct: 548 SLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIY 607
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE------------PD 317
+ G+ ++ EEI ++ + I YN+LM Y + CE PD
Sbjct: 608 GKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCE-KCENILTEIKSSRARPD 666
Query: 318 RASYNIMVDAYGRAG--------LHEGKCS 339
R SYN M+ AYGR G E KCS
Sbjct: 667 RYSYNTMIYAYGRKGQMKEASRLFSEMKCS 696
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY E+L + C P TY L+K + + G + VF E+R G P V +N+ +
Sbjct: 374 TYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFG 433
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + +F+ MK+ P +TY +I+ Y + A++++ M P+I
Sbjct: 434 QNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDIS 493
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY A+++A AR G E+AE++F +++ PD +Y++L+ AY
Sbjct: 494 TYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAY 537
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 27/227 (11%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM------RKYGLPPSAVVYN 193
F +E LDSR P E +Y+ LL AY + L+K +++ ++ GL + V+ N
Sbjct: 515 FAEMENLDSR--PDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVN 572
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S ++ L + +KA F ++R C MI++YGK ++ + M+
Sbjct: 573 SKVNNL---SDTEKA---FLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKES 626
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------- 304
+ TY +L++ ++R G CE+ E I +++ + PD Y+YN ++ AY
Sbjct: 627 SINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEA 686
Query: 305 -RLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
RL S M G PD +YNI V +Y + E + LV V H
Sbjct: 687 SRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEE--AIDLVRYMVTH 731
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%)
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
E +LEL RC + ++ Y +G+++K E + M++ + S YNS +
Sbjct: 582 EKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHM 641
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ G+ +K I +K +P +Y MI YG+ + A +LF+EM+ P+
Sbjct: 642 YSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPD 701
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
I TY V ++ + EEA ++ + G +P+ YN +++ Y
Sbjct: 702 IVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEY 747
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 19/229 (8%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI+ +G + + + E+ + +P T+ LL + +GL + VF+E
Sbjct: 388 CTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKE 447
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+K G P Y S I + G +A+EI++RM P TY +++ + +
Sbjct: 448 MKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGR 507
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF EM + +P+ +Y++L++A+A ++ + + E + IE ++N
Sbjct: 508 WEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIE----SHNG 563
Query: 300 LMEAYRLISR---------------MHMGCEPDRASYNIMVDAYGRAGL 333
L++ L++ C D N M+ YG+ G+
Sbjct: 564 LVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGM 612
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ + KK E + +S + TY L+ Y G EK E + E++
Sbjct: 603 MISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSR 662
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ I + G ++A +F MK P TY + + Y S A+
Sbjct: 663 ARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAI 722
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
L M +H CKPN TY ++ + G + + L
Sbjct: 723 DLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNL 763
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------- 305
P+ YTAL++A +R +A +F ++ G+ P + YN ++ Y
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 306 LISRMHMGCEP-DRASYNIMVDAYGRAGLHE 335
L+ M P DR +YN ++ R L++
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYK 264
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C PT TY ++ AY + L++A VF EM++ G P V Y + ID K G
Sbjct: 385 EMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAG 444
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++ RM+ P T TY+ M+N GK + A KLF EM + C PN+ TY
Sbjct: 445 YLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYN 504
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
++ A+ E ++++ +Q AG PD Y+ +M EA + M
Sbjct: 505 IMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRD 564
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 565 WAPDEPVYGLLVDLWGKAG 583
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ FQ +KR QP TYT MI + G+A + + KL +EM CKP + TY
Sbjct: 343 ALGFFQWLKR---QPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYN 399
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
+++A+ R +EA ++FE++Q AG EPD Y L++ A L RM +
Sbjct: 400 RIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEV 459
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y+ MV+ G+ G
Sbjct: 460 GLSPDTFTYSAMVNCLGKGG 479
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 54/298 (18%)
Query: 95 TWDDLINVSVQLR----LNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLEL 145
T+ +I + Q R L K D + C + +I AYG+ + K+A + E+
Sbjct: 362 TYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEM 421
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
++ P TY L+ + +G L+ A ++ M++ GL P Y++ ++ L KGG
Sbjct: 422 QEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQL 481
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A ++F M + C P+ TY +MI L KA +KL+ +M+ +P+ TY+ +
Sbjct: 482 AAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIV 541
Query: 266 VNAFAREGLCEEAEEIFEQLQ----------------------------------GAGIE 291
+ G +EAE +F +++ G++
Sbjct: 542 MEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQ 601
Query: 292 PDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKC 338
P+V N+L+ A+ ++R G P +Y +++ A G C
Sbjct: 602 PNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQGLVPSVQTYTLLLSCCTEAQAQMGLC 659
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE + E++ +P Y L+ +C G + A F EM + P + Y + I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G + G+ +A ++F M +P + T+T +IN Y KA A ++ N M C
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN+ TYT L++ +EG + A E+ ++ G++P+++ YN+++ EA +L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ G D +Y ++DAY ++G
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSG 540
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + K A + ++ + C P TY L+ C G L+ A + EM K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YNS ++GL K GN ++AV++ + T TYT +++ Y K+ + A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM +P I T+ L+N F G+ E+ E++ + GI P+ +N+L++ Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRA 331
+ + + G PD +Y +V + +A
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 11/228 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V LI+ + ++ + A + E+ P TY ++ +C G + +A +F
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM GL P +V + I+G K G+ + A + M + C P+ TYT +I+ K
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A +L +EM +PNI TY ++VN + G EEA ++ + + AG+ D Y
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 299 ALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
LM+AY L + G +P ++N++++ + G+ E
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ ++ YC G L+K + M++ GL P++ +Y S I L + +A E
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M R P T YT +I+ + K A K F EM S P++ TYTA+++ F +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EA ++F ++ G+EPD + L+ +A+R+ + M GC P+ +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 459 YTTLIDGLCKEG 470
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ YC +G ++ A V M + G P+ V Y + IDGL K G+ A E+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + QP+ TY ++N K+ A+KL E + + TYT L++A+ +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G ++A+EI +++ G G++P + +N LM + +L++ M G P+ +
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 321 YNIMVDAY 328
+N +V Y
Sbjct: 599 FNSLVKQY 606
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +++ C G +++A + M G P + Y++ ++G + G K ++ + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR +P++ Y +I L + K A + F+EM P+ YT L++ F + G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
A + F ++ I PDV Y A++ EA +L M G EPD ++ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 325 VDAYGRAG 332
++ Y +AG
Sbjct: 428 INGYCKAG 435
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + KA+ E+L PT T+ +L+ +C+ G+LE E + M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A +NS + N + A I++ M P +TY ++ + KA A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF EM+ ++ TY+ L+ F + EA E+F+Q++ G+ D
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ AYC SG ++KA+ + +EM GL P+ V +N ++G G + ++ M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T+ ++ Y + A ++ +M S P+ TY LV +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+EA +F++++G G V Y+ L++ +
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTET 226
GLL +A VF +M YGL S N Y+ L K A+ +F+ + +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y ++I+ + + A L M P++ +Y+ +VN + R G ++ ++ E ++
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++P+ Y Y +++ EA S M G PD Y ++D + + G
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 11/171 (6%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A VFRE + G+ + YN I + + G ++A + M+ P +Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y + + KL M+ KPN Y +++ R EAEE F ++ GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 293 DVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
D Y L++ + + MH PD +Y ++ + + G
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
MSC +++ A +++ E+ Y E++ + P T+ +++ A C +G + KA V
Sbjct: 189 MSCKPLMV--ALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246
Query: 178 REMRKYGLPPSAVVYNSYIDGLLK-GGNPQ--KAVEIFQRMKRDCCQPSTETYTLMINLY 234
+M+ YG P+ V YN+ IDG K GGN + KA + + M + P+ T+ ++I+ +
Sbjct: 247 EDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGF 306
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K +LK+F EM PN+ TY +L+N G EA + +++ AG++P++
Sbjct: 307 WKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNL 366
Query: 295 YAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y++L+ + S G P YN+++DAY + G
Sbjct: 367 ITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLG 415
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ E+LD IP TY L+ C G + +A + +M G+ P+ + Y+S I+G
Sbjct: 318 VFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFC 377
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G ++A+++F +K +P+T Y ++I+ Y K K L EM P++
Sbjct: 378 KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM 310
TY L+ R G E A+++F+QL G+ PD+ ++ LME Y L+ M
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEM 496
Query: 311 -HMGCEPDRASYNIMVDAYGRAG 332
MG +P +YNIM+ Y + G
Sbjct: 497 SKMGLKPRHLTYNIMMKGYCKEG 519
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + + K+A + + PT Y +L+ AYC G ++ A+ EM + G
Sbjct: 372 LINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN I GL + GN + A ++F ++ P T+ +++ Y +S A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAA 490
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-GIEPDVYAYNALMEA 303
L EM KP TY ++ + +EG + A + Q++ + +V +YN L++
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 304 YR-----------LISRMHMGCEPDRASYNI----MVD 326
Y L + G P+R +Y I MVD
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L ++ +P T+ +L++ YC G KA + +EM K GL P + YN + G K GN
Sbjct: 462 LTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNL 521
Query: 206 QKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ A + +M+++ + + +Y +++ Y + K A L NEM PN TY
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Query: 265 LVNAFAREGLCEEAE 279
+ +G + E
Sbjct: 582 VKEEMVDKGFVPDIE 596
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F + + D+ C+ + L+L AY + E F+ YG SA+ + L
Sbjct: 140 FHAISMCDNVCVNSIIADMLVL-AYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVAL 198
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
LK +++ M R QP+ T+ ++IN K K A + +M+ + PN+
Sbjct: 199 LKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNV 258
Query: 260 CTYTALVNAFAR---EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+Y L++ + + G +A+ + +++ + P++ +N L++ +
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGF 306
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+EL + P Y L+ C G +EKA+ +F EM K GL + Y I+GL K
Sbjct: 187 IELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKN 246
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G ++ E++++M+ D P+ TY ++N K ++ A ++F+EMR NI TY
Sbjct: 247 GVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY 306
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------H 311
L+ RE EA ++ +Q++ GI P++ YN L++ + + ++
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 312 MGCEPDRASYNIMVDAYGRAGLHEG 336
G P +YNI+V + R G G
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSG 391
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C L +A V +M+ G+ P+ + YN+ IDG G KA+ + + +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K PS TY ++++ + + + A K+ EM KP+ TYT L++ FAR
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E+A ++ ++ G+ PDV+ Y+ L+ EA RL M CEP+ YN M
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 325 VDAYGRAG 332
+ Y + G
Sbjct: 485 ILGYCKEG 492
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 115/225 (51%), Gaps = 13/225 (5%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+C + LL G S ++ +++ S+ + ++ +L+K C +G +EK+ +
Sbjct: 130 NCFNYLLTFVVGSSSFNQ--WWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLI 187
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
E+ ++G P+ V+Y + IDG K G +KA ++F M + + TYT++IN K
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+++ +M+ PN+ TY ++N ++G ++A ++F++++ G+ ++ YN
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ EA +++ +M G P+ +YN ++D + G
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C G L KA ++ R+++ GL PS V YN + G + G+ A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +PS TYT++I+ + ++ A++L M P++ TY+ L++ F
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+G EA +F+ + EP+ YN ++ Y +L+ M P+ AS
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 321 YNIMVDA 327
Y M++
Sbjct: 516 YRYMIEV 522
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + K+ Y ++ + P TY ++ C G + A VF EMR+
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V YN+ I GL + +A ++ +MK D P+ TY +I+ + K A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L L +++S P++ TY LV+ F R+G A ++ ++++ GI+P Y L++
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAY 328
+ M +G PD +Y++++ +
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P++ TY +L+ + S +EKA + M + GL P Y+ I G G +A +
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M C+P+ Y MI Y K S+ ALKL EM + PN+ +Y ++ +
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 272 EGLCEEAEEIFEQLQGAGIEP 292
E +EAE + E++ +GI+P
Sbjct: 526 ERKSKEAERLVEKMIDSGIDP 546
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + TY++ + C G +E+A +F ++ G+ + V+Y + IDG K G A
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYS 530
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ +RM D C P++ TY ++I K K A L +M + KP + TYT L+
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRA 319
++G + A ++F + G +PDV Y A + AY +I++M+ G PD
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLV 650
Query: 320 SYNIMVDAYGRAGL 333
+Y +++D Y R GL
Sbjct: 651 TYTVLIDGYARLGL 664
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 116 VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
+LMS LLI+ + + YLELL+++ P T+ ++ YC G + +AE
Sbjct: 165 ILMSLSKFLLID---------EMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
++ + GL P Y S I G + A E+F M + CQ + +YT +I+
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+A + ALKLF +M C P + TYT L+ A + G EA +F +++ G EP+V+
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 296 AYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
Y L+ EA +++S M G P +YN ++D Y + G+
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C + ++ A VF M + G + V Y + I GL + G +A+++
Sbjct: 227 PDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL 286
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M D C P+ TYT++I + + AL LFNEM+ C+PN+ TYT L++ +
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRAS 320
E +EA ++ ++ G+ P V YNAL+ +A+ ++ M C P+ +
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRT 406
Query: 321 YNIMV 325
YN ++
Sbjct: 407 YNELI 411
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 46/230 (20%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C P TY +L+ C +++A + EM + GL PS V YN+ IDG K G
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A EI M+ + C P+T TY +I K K A+ L N+M K P++ TY
Sbjct: 384 MIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYN 443
Query: 264 AL-----------------------------------VNAFAREGLCEEAEEIFEQLQGA 288
+L ++ +EG EEA +F+ ++
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDA 327
G++ + Y AL++ AY L+ RM + C P+ +YN++++
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ + C PT TY +L+ A SG +A +F EM++ G P+ Y IDGL K
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A ++ M PS TY +I+ Y K A ++ + M S+ C PN T
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRT 406
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y L+ ++ +A + ++ + P + YN+L+ AYRL+S M+
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
G PD+ +Y++ +D + G
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEG 488
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y ++ + A F L+L++S C P TY L+ C + KA A+ +M +
Sbjct: 375 LIDGYCKEGMIDDA-FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L PS + YNS I G K + + A + M + P TY++ I+ K + A
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF+ +++ K N YTAL++ + + G + A + E++ P+ Y YN L+
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+++M MG +P +Y I++ + G
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L+ + P+ TY L+ C LE A + M + GL P Y+ +ID L K G
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F +K + + YT +I+ Y K K +A L M + C PN TY
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ +E +EA + ++ G++P V Y L+ A ++ + M +
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G +PD +Y + AY G+ E
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLE 631
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 99/266 (37%), Gaps = 64/266 (24%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIE ++ K+A ++L PT TY +L+ G + A VF M
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G P Y +++ G ++ ++ +M + P TYT++I+ Y G ++
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668
Query: 241 F--------------------------------------------------MALKLFNEM 250
F +ALKLF +M
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKM 728
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
H C ++ Y AL+ F ++ EEA+ + ++ G+ P YN+L+
Sbjct: 729 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 788
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMV 325
EA RL+ M G P SY ++V
Sbjct: 789 AEAVRLVDAMVENGLLPLLESYKLLV 814
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ C Y L+ +C LE+A+ + M++ G+ PS +YNS +D K G
Sbjct: 727 KMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLG 786
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMI-NLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+AV + M + P E+Y L++ LY + S A +F+ + S + +
Sbjct: 787 VYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE-KAKAVFHGLLSCGYNYDEVAW 845
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ + L +E E+ + ++ G +P+ Y+ L+E
Sbjct: 846 KVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + Q+ ++A+ + + P+ED Y LL C G+ +A + M + G
Sbjct: 743 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 802
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + GL G+ +KA +F + + ++I+ K
Sbjct: 803 LLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECS 862
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR 271
+L + M C+PN TY+ L+ R
Sbjct: 863 ELIDIMEEKGCQPNPLTYSLLIEGLER 889
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 26/266 (9%)
Query: 89 LPPTHATWDDLINVSVQLR------------LNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
L P T + LIN QL+ + P ++ LI G+
Sbjct: 6 LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTT---LINGLGKVGKFA 62
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + +++ C P + TY ++ C G A +F++M + G + V Y++ I
Sbjct: 63 QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI 122
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
L K +A++IF MK P+ TYT +I S+ A L NEM S
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR------- 309
PN+ T+ LV+ F +EG AE + + + G+EPDV YN+LM Y + +
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242
Query: 310 ----MHMGCEPDRASYNIMVDAYGRA 331
+ GC+PD SY+I+++ Y +A
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKA 268
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 15/197 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C P +Y++L+ YC + +++A+ +F EM G P+ V YN+ I GL + G
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A ++F+ M + P+ TY ++++ + K A +LF M+S KPN+ Y
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMH 311
LVNA + G ++A E+F +L G++P+V Y + +EA+R +
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFR--NMED 423
Query: 312 MGCEPDRASYNIMVDAY 328
GC PD SYN+++ +
Sbjct: 424 DGCPPDEFSYNVIIRGF 440
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ S K+A E+ +P T+ +L+ +C G + AE V + M + G
Sbjct: 156 LIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMG 215
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YNS + G +A ++F M C+P +Y+++IN Y KA + A
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAK 275
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+LFNEM PN +Y L++ + G EA+++F+ + G P++Y Y L++
Sbjct: 276 QLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF 335
Query: 303 --------AYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
A+RL M +P+ YNI+V+A ++G
Sbjct: 336 CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T +L+ +C ++ +V + K GL P+ V + + I+GL K G +AVE+
Sbjct: 8 PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M CQP TYT +IN K ++ +A LF +M C+ N+ TY+ L+++ +
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EA +IF ++ I P ++ Y +L+ EA L++ M + P+ +
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187
Query: 321 YNIMVDAYGRAG 332
+N++VD + + G
Sbjct: 188 FNVLVDTFCKEG 199
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 85 AFDSLPPTHATWDDLINVS--VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTY 142
++SL ++ W +++ + + K P V + LI Y + +A+ +
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSI---LINGYCKAKRIDEAKQLF 278
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
E++ P +Y L+ C G L +A+ +F+ M G P+ Y +DG K
Sbjct: 279 NEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQ 338
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G KA +F+ M+ +P+ Y +++N K+ A +LF+E+ +PN+ Y
Sbjct: 339 GYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIY 398
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
T ++N +EGL +EA E F ++ G PD ++YN ++ +
Sbjct: 399 TTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGF 440
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F+Y++ D PT TY L++ C ++A A+ EM + P+ V +N +D
Sbjct: 138 FSYMKAKDIS--PTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G A + + M +P TY ++ Y ++ A KLF+ M + CKP++
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDV 255
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
+Y+ L+N + + +EA+++F ++ G P+ +YN L+ EA L
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315
Query: 310 MHM-GCEPDRASYNIMVDAYGRAG 332
MH G P+ +Y I++D + + G
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQG 339
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q ++A+ + + + +P TYA+LL +C G L KA +FR M+
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V+YN ++ + K GN + A E+F + QP+ + YT +IN K AL
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ F M C P+ +Y ++ F + A + +++ G D
Sbjct: 416 EAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ + ++ KA + + + P Y +L+ A C SG L+ A +F E+
Sbjct: 330 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVI 389
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ +Y + I+GL K G +A+E F+ M+ D C P +Y ++I + + A
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRA 449
Query: 244 LKLFNEMR 251
+ L EMR
Sbjct: 450 VHLIGEMR 457
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ Y +KA F Y +L + + + TY LLK+ C SG ++ A AV +EM
Sbjct: 630 LMQGYASLGDTEKA-FQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAK 688
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+P + VYN IDG + G+ +A ++ Q+M+++ P TYT +N KA A
Sbjct: 689 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKA 748
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ EM + KPN+ TYT L+N +AR + E+A FE+++ A ++PD AY+ LM +
Sbjct: 749 TEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTS 808
Query: 304 YRLISR 309
L+SR
Sbjct: 809 --LLSR 812
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ A+C + +++AEA+ REM G+ +Y++ +DG GN +K + +F R+
Sbjct: 381 TYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 440
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K PS +Y +INLY K K AL++ M+ K N+ TY+ L+N F +
Sbjct: 441 KECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDW 500
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
A +FE G++PDV YN ++ A+ +S M
Sbjct: 501 ANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNM 535
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A +VF + K GL P V+YN+ I N +A+ + ++M
Sbjct: 486 TYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQM 545
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ +P+T T+ +I+ + +A + AL++F+ MR C P + TY AL+ +
Sbjct: 546 QKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKM 605
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A I +Q+ AG+ P+ + Y LM+ Y
Sbjct: 606 AKAVAILDQMNVAGVGPNEHTYTTLMQGY 634
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+ D S CIPT TY L+ + KA A+ +M G+ P+ Y + + G
Sbjct: 574 LEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQG 633
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G+ +KA + F ++ + + TY ++ K+ + AL + EM + N
Sbjct: 634 YASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRN 693
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLIS 308
Y L++ +AR G EA ++ +Q++ G+ PD++ Y + + +A +I
Sbjct: 694 TFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQ 753
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAGLHEGKCS 339
M G +P+ +Y +++ + RA + E S
Sbjct: 754 EMEAFGIKPNLKTYTTLINGWARASMPEKALS 785
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L++ Y G EKA F +R GL Y + + K G Q A+ +
Sbjct: 622 PNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAV 681
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +T Y ++I+ + + + A L +MR P+I TYT+ VNA +
Sbjct: 682 TKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCK 741
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS--RMHMGC---------EPDRAS 320
G ++A EI ++++ GI+P++ Y L+ + S + C +PD+A+
Sbjct: 742 AGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAA 801
Query: 321 YN-IMVDAYGRA 331
Y+ +M RA
Sbjct: 802 YHCLMTSLLSRA 813
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +Y L+ Y G + KA + + M+ G+ + Y+ I+G LK + A +
Sbjct: 447 PSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSV 506
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ +D +P Y +I + S A+ + +M+ + +P T+ +++ FAR
Sbjct: 507 FEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFAR 566
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G A EIF+ ++ +G P V+ YNAL+ +A ++ +M++ G P+ +
Sbjct: 567 AGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHT 626
Query: 321 YNIMVDAYGRAGLHEGKCSY 340
Y ++ Y G E Y
Sbjct: 627 YTTLMQGYASLGDTEKAFQY 646
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L++K Y G + A F M+ G+ PS+ VY+S I G + ++A+
Sbjct: 272 PARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHC 331
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + + TY++++ + K K+ A F E + N TY +++ A +
Sbjct: 332 VRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQ 391
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
+ AE + +++ GI+ + Y+ +M+ Y +I G P S
Sbjct: 392 TCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVIS 451
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 452 YGCLINLYTKIG 463
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +A ++ +P TY + A C +G ++KA + +EM +
Sbjct: 699 ILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAF 758
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT-LMINLYGKAS 238
G+ P+ Y + I+G + P+KA+ F+ MK +P Y LM +L +A+
Sbjct: 759 GIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRAT 814
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+K+ P+ + Y LM+ Y + A + F M++ +P+ Y+
Sbjct: 258 NWQAVVTAFERIKK----PARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYS 313
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L++A+A EEA +++ GIE + Y+ ++ +
Sbjct: 314 SLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGF 354
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P TY+ L+ +CM L++A+ +F M
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ I G K ++ +E+F+ M + +T TY +I +A MA
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
K+F +M S P+I TY+ L++ + G E+A +FE LQ + +EPD+Y YN ++E
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +P+ Y M+ + R GL E
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 134 LHKKAE--FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
LH KA ++ + +R C P TY ++ C G ++ A ++ ++M K + V
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLF 247
+Y + ID L N A+ +F M +P+ TY +I YG+ S A +L
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD---ASRLL 313
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
++M K PN+ T++AL++AF +EG EAE++++++ I+PD++ Y++L+ +
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 305 -RLISRMHM-------GCEPDRASYNIMVDAYGRA 331
RL HM C P+ +YN ++ + +A
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 70/337 (20%)
Query: 63 SPTAQQILRFVQREVDSNTI-----WDAF---DSLPPTHATWDDLINVSVQLRLNKKWDP 114
S ++ + ++R+++ N + DAF L +D++I S+ DP
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--------DP 358
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ LI + +A+ + ++ C P TY L+K +C + +E+
Sbjct: 359 DIFTYSS---LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN-- 232
+FREM + GL + V YN+ I GL + G+ A +IF++M D P TY+++++
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 233 -LYGKASKSFMALK--------------------------------LFNEMRSHKCKPNI 259
YGK K+ + + LF + KPN+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISR 309
YT +++ F R+GL EEA+ +F +++ G P+ YN L+ A LI
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
M G D ++ +++++ LH+G+ S +E+
Sbjct: 596 MRSCGFVGDASTISMVINM-----LHDGRLEKSYLEM 627
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC + +A A+ +M P+ V +N+ I GL +AV +
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM CQP TY ++N K +AL L +M K + ++ YT +++A
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+A +F ++ GI P+V YN+L+ +A RL+S M P+ +
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 328 FSALIDAFVKEG 339
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 146 LDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+D++ I P TY L++ C G A + +M + + P+ V +++ ID +K G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A +++ M + P TY+ +IN + + A +F M S C PN+ TY
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ F + EE E+F ++ G+ + YN L++ A ++ +M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD +Y+I++D + G
Sbjct: 461 VPPDIITYSILLDGLCKYG 479
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A C + A +F EM G+ P+ V YNS I L G A + M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T++ +I+ + K K A KL++EM P+I TY++L+N F +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR-----------ASYNIMV 325
EA+ +FE + P+V YN L++ + R+ G E R +YN ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 326 DAYGRAG 332
+AG
Sbjct: 438 QGLFQAG 444
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +L+ +C L A AV +M K G P V +S ++G G +AV + +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
QP+T T+ +I+ L+ KAS+ A+ L + M + C+P++ TY +VN +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASE---AVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G + A + ++++ IE DV Y ++ +A L + M + G P+ +Y
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 322 NIMVDA---YGR 330
N ++ YGR
Sbjct: 294 NSLIRCLCNYGR 305
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A +F EM + PS V +N + + K + + +RM+ +Y +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL + +M +P+I T ++L+N + EA + +Q+
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+P+ +N L+ EA LI RM GC+PD +Y +V+ + G
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR +P+ + LL A + ++ M+ + YN I+ +
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P T + ++N Y + A+ L ++M + +PN T+
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +++ G +PD++ Y ++ A L+ +M G
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 314 -CEPDRASYNIMVDA 327
E D Y ++DA
Sbjct: 250 KIEADVVIYTTIIDA 264
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 16/216 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L +S + ++Y +L+ AYC SG +E+A R + + P+A Y++ + L G
Sbjct: 130 LEESGAVIDANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGK 186
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+++ R + C P T T++I+ K S A+KLFNEMR CKP++ TY
Sbjct: 187 LKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNV 246
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMG 313
L+ F +EG +EA ++L G + DV ++N + M+A +L++ M G
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306
Query: 314 CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
C P ++NI+++ + GL GK + +++E+ KH
Sbjct: 307 CFPSVVTFNILINFLCQKGLL-GK-ALNVLEMMPKH 340
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 13/224 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI QK L KA LE++ P ++ L++ +C +++A M
Sbjct: 316 ILINFLCQKGLLGKA-LNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVS 374
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P V YN + L K G AV I ++ C PS +Y +I+ K K+ +
Sbjct: 375 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAEL 434
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A++L EM KP++ T T++V +REG EA + F L+G GI+P+ + YN++M
Sbjct: 435 AVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMM 494
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L+ + GC+P ASY ++ GL E
Sbjct: 495 GLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAE 538
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L S+C P T +L+ A C + +A +F EMR G P V YN I G K G
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+A+ +++ CQ ++ +++ + A+KL M C P++ T+ L
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----GC 314
+N ++GL +A + E + G P+ ++N L++ + R I + + GC
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGC 377
Query: 315 EPDRASYNIMVDAYGRAG 332
PD +YNI++ A + G
Sbjct: 378 YPDIVTYNILLTALCKDG 395
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 88 SLPPTHATWDDLI---------NVSVQL---RLNKKWDPIVLMSCVSILLIEAYGQKSLH 135
S+ P AT+D ++ ++Q+ +L K P V+ V LI+A ++S
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTV---LIDATCKESGV 222
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A + E+ C P TY +L+K +C G L++A +++ YG + +N
Sbjct: 223 GQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMI 282
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ L GG A+++ M R C PS T+ ++IN + AL + M H
Sbjct: 283 LRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 342
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN ++ L+ F + A E E + G PD+ YN L+ +A
Sbjct: 343 TPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 402
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
++S++ GC P SYN ++D + G E
Sbjct: 403 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 39/203 (19%)
Query: 125 LIEAY-GQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI+ + +K + + E +LE++ SR C P TY +LL A C G ++ A + ++
Sbjct: 352 LIQGFCNRKGIDRAIE--HLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 409
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G PS + YN+ IDGLLK G + AVE+ + M +P T T ++ + K
Sbjct: 410 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHE 469
Query: 243 ALKLFN-----------------------------------EMRSHKCKPNICTYTALVN 267
A+K F+ +M ++ CKP +YT L+
Sbjct: 470 AIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIK 529
Query: 268 AFAREGLCEEAEEIFEQLQGAGI 290
EGL EEA ++ +L G+
Sbjct: 530 GITYEGLAEEASKLSNELYSRGL 552
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + +++D P+ TY ++ C + +++AE VF++M G+ P V YN+ ID
Sbjct: 279 AEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIID 338
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K KA +FQ+M +P TYT++I+ KA A +F +M KP
Sbjct: 339 GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP 398
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N TY L++ + G EE + +++ +EPDV+ Y L+ EA L
Sbjct: 399 NNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLF 458
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAG 332
M G +P Y IM+ YG+ G
Sbjct: 459 DSMIRKGIKPSVTIYGIMLHGYGKKG 484
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + +AE + +++D P TY ++ C + ++KAE VF++M G
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG 360
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + Y IDGL K + +A +FQ+M +P+ TY +I+ Y + +
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVV 420
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM +H +P++ TY L++ + G C EA +F+ + GI+P V Y ++ Y
Sbjct: 421 QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY 480
Query: 305 ---RLISRMH--------MGCEPDRASYNIMVDAYGRAGL 333
+S MH G P+ +N ++ AY + +
Sbjct: 481 GKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
DS C P +Y +++ + G ++KA ++F EM G+ P V YN+ IDGL K
Sbjct: 186 DSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVD 242
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A ++FQ+M +P+ TY +I+ KA + MA +F +M KP+ TY ++
Sbjct: 243 RAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTII 302
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCE 315
+ + + AE +F+Q+ G++PD YN +++ A + +M G +
Sbjct: 303 DGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVK 362
Query: 316 PDRASYNIMVDAYGRA 331
PD +Y I++D +A
Sbjct: 363 PDNLTYTIIIDGLCKA 378
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE + ++++ P TY ++ C + ++ AE VF++M G+ PS V YN+ I
Sbjct: 243 RAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTII 302
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K +A +FQ+M +P TY +I+ KA A +F +M K
Sbjct: 303 DGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVK 362
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
P+ TYT +++ + + AE +F+Q+ G++P+ YN L+ Y R
Sbjct: 363 PDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQR 422
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
+ EPD +Y +++D + GKC+
Sbjct: 423 IKEMSAHDLEPDVFTYGLLLDYLCK----NGKCN 452
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + KA +LE+ S P TY ++ C + +++AE VF++M +
Sbjct: 198 IVINGFFNEGQVDKAYSLFLEMGVS---PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK 254
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ V YN+ IDGL K A +FQ+M +PS TY +I+ KA A
Sbjct: 255 GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRA 314
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F +M KP+ TY +++ + ++AE +F+Q+ G++PD Y +++
Sbjct: 315 EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDG 374
Query: 304 Y---RLISR--------MHMGCEPDRASYNIMVDAYGRAG 332
+ + R + G +P+ +YN ++ Y G
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTG 414
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + +AE + +++D P TY L+ Y +G E+ +EM +
Sbjct: 370 IIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAH 429
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P Y +D L K G +A +F M R +PS Y +M++ YGK
Sbjct: 430 DLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM 489
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L N M ++ PN + ++ A+A+ + +E IF +++ G+ P+V Y L++A
Sbjct: 490 HDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549
Query: 304 YRLISR-----------MHMGCEPDRASYNIMV 325
+ R ++ G P+ +N +V
Sbjct: 550 LCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY ++++ + ++++ P TY L+ A C G ++ A F +M G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ VV+NS + GL +K E+F M +P + ++ K + A
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L + M KP++ +Y L++ +EA ++ + + AG++P++ +YN L+ Y
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGY 690
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
R + G P +YN +++ R+G
Sbjct: 691 CKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL YC +G ++ A +FREM + G+ P YN+ ++GL + G +A E+
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + S TY+++++ + K + A K+F + S + +I T+ +++ +
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
G E+A ++F + G+ P V Y + E
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAE 828
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ +C + +++A + M GL P+ V YN+ + G K G A +
Sbjct: 643 PDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCL 702
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M R P ETY ++N ++ + A +L+ M + +ICTY+ +++ F +
Sbjct: 703 FREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCK 762
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
+EA +IF+ L ++ D+ +N +++ R M + G P +
Sbjct: 763 NNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVT 822
Query: 321 YNIMVDAYGRAG-LHEGKCSYSLVELS 346
Y ++ + G L E C +S++E S
Sbjct: 823 YRLIAENLIEEGSLEELDCLFSVMEKS 849
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 13/221 (5%)
Query: 128 AYGQKSLHK--KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
YG ++ K K E +LE+L+ P + +L C G + +A + M GL
Sbjct: 582 VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + YN+ IDG +AV++ M +P+ +Y +++ Y KA + A
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
LF EM P + TY ++N R G EA E++ + + + Y+ ++
Sbjct: 702 LFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFC 761
Query: 302 ------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA+++ + M + D ++NIM+D + G E
Sbjct: 762 KNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR- 214
TY++++ +C G LE A F + K G +V N + GL +A+ + R
Sbjct: 86 TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTALVNAFAR 271
M C+ +Y ++ ++ A +L + M + C P++ +Y ++N F
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
EG ++A +F ++ G+ PDV YN +++ A + +M G +P+ +
Sbjct: 206 EGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262
Query: 321 YNIMVDAYGRA 331
YN ++D +A
Sbjct: 263 YNTIIDGLCKA 273
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 31/189 (16%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG---GNPQKAVEIFQRMKRDCCQ---PS 223
L A +F E+ + P S N + + + + + AV F RM RDC P
Sbjct: 24 LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC------EE 277
TY+++I + + + + F + + + L+ +GLC E
Sbjct: 84 CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLL-----KGLCDTKRVGEA 138
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG----CEPDRASYNI 323
+ Q+ G V +YN L+ EA L+ M G C PD SYNI
Sbjct: 139 MHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI 198
Query: 324 MVDAYGRAG 332
+++ + G
Sbjct: 199 VINGFFNEG 207
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY Q+ L ++AE T ++LD + + YA L+ AY +GL + + M+ G
Sbjct: 256 LVHAYAQEGLWEEAEKTLSDMLDVGIV-DDRPYAALVAAYGKAGLTDNVNKILETMKASG 314
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ S +YN+ I+ K P+KA + Q M+ D CQ TYT ++ Y + + MA
Sbjct: 315 VEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAE 374
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM+ +P +Y L++A+ R G +AE I +Q A +P V YN ++ Y
Sbjct: 375 SMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGY 434
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAY 328
R+ M G PD ++N ++ Y
Sbjct: 435 ASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMY 469
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY------CM-SGLLEKAEAVFREMRKYG 184
+S +A FT ++ S +D+ +K Y C+ G + A +F+ G
Sbjct: 116 RSWGSRAAFTIVQATSSSDYLEDDSQLNSVKDYNSALLNCVKDGRMRDAMTIFKRFEGAG 175
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y + I G K + K ++F RM+R+ C P + T++I+ YG +A
Sbjct: 176 LKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAE 235
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +P+ YTALV+A+A+EGL EEAE+ + GI D Y AL+ AY
Sbjct: 236 SAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RPYAALVAAY 294
Query: 305 ----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+++ M G E YN +++ + +A E
Sbjct: 295 GKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPE 336
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 133 SLHKKAEF-----TYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
++H KAE L+L+ + C E TY +++AY + AE++ EM++ G+
Sbjct: 327 NIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQ 386
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P V Y I + G A I + M+ C+P+ E Y +MI+ Y A A ++
Sbjct: 387 PGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERM 446
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F M+ +P+ T+ L++ + + ++AE+ + ++Q G +P+ Y L++AY
Sbjct: 447 FQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAY 504
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++EAY + AE E+ + P +Y +L+ AYC +G L AE + R M+
Sbjct: 360 VMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAK 419
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ +YN I G +A +FQ M+ +P T+ +I++Y K+ K A
Sbjct: 420 CKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAE 479
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+ M+ CKPN TY L+ A+ +AE I ++ AGI
Sbjct: 480 DCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKAGI 525
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 45/255 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+ + K + + +RC P +L+ Y GL AE+ + + G
Sbjct: 186 LIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQG 245
Query: 185 LPPSAVVYNSYI-----DGLL-----------------------------KGGNPQKAVE 210
L P A+ Y + + +GL K G +
Sbjct: 246 LQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDDRPYAALVAAYGKAGLTDNVNK 305
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + MK + ST Y +IN++ KA A + M++ C+ + TYT+++ A++
Sbjct: 306 ILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYS 365
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDRA 319
R AE + +++ AGI+P +Y L+ AY R++ M C+P
Sbjct: 366 RNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVE 425
Query: 320 SYNIMVDAYGRAGLH 334
YN+M+ Y A +
Sbjct: 426 IYNMMISGYASAKMR 440
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY + AE + +++C PT + Y +++ Y + + +AE +F+ M+
Sbjct: 394 VLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDC 453
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P AV +N+ I +K ++A + + RM++ C+P+ TY +++ Y + S A
Sbjct: 454 GLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDA 513
Query: 244 LKLFNEMR 251
++ +MR
Sbjct: 514 ERIRLDMR 521
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K++ K E + ++ R P TY++LL+ + + L K V+ EM G P V
Sbjct: 186 KNVRKAQEI--FDKMNGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVT 243
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y +D L K G ++AV + Q M CQP+T Y+++++ YG + A+ F +M
Sbjct: 244 YGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDME 303
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
P++ Y ALV AF + E A + + ++G GI P+ +N ++
Sbjct: 304 KDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDD 363
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
EAYR+ RM C+PD +Y +M+ + C VE+++K +
Sbjct: 364 EAYRVFRRMIKRCQPDSDTYTMMIKMF---------CENDNVEMALKVW 403
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T+ ++++ Y + ++A F M KYG+ P+ +NS + L K N +KA EIF +
Sbjct: 138 ETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDK 197
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P +TY++++ +GKA ++++EM C+P+I TY +V++ + G
Sbjct: 198 MNGR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGR 256
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
EEA + + + G +P + Y+ L+ Y + R+ G PD YN
Sbjct: 257 VEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNA 316
Query: 324 MVDAY 328
+V A+
Sbjct: 317 LVTAF 321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG + + A T+L++ +P Y L+ A+C E A V +M +
Sbjct: 281 VLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGH 340
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P++ +N ++ L+ G +A +F+RM + C QP ++TYT+MI ++ + MA
Sbjct: 341 GIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRC-QPDSDTYTMMIKMFCENDNVEMA 399
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
LK++ MR + P++ T++ L+N +G +A + E + GI P
Sbjct: 400 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRP 448
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF---REMRKYGLPPSAVVY 192
+KA LEL S T D +L+ +G+L A F R+ ++ G + Y
Sbjct: 49 QKASGLELELDHSDLRVTPDVAERVLERLDNAGML--AYRFFEWARKQKRGGCNHTIRSY 106
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
++ + L K Q ++ M+R+ + ET+ +++ Y +A K A+ FN M
Sbjct: 107 HTVVASLAKIRQYQLMWDVVAIMRREGV-VNVETFGIIMRKYARAQKFDEAVYTFNIMEK 165
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------- 304
+ PN+ + +L+ A + +A+EIF+++ G PD Y+ L+E +
Sbjct: 166 YGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGR-FNPDAKTYSILLEGWGKAPNLPK 224
Query: 305 --RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ S M GC+PD +Y IMVD+ + G E
Sbjct: 225 MREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVE 258
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P DTY +++K +C + +E A V++ MR PS ++ I+GL G +A
Sbjct: 375 RCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQA 434
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
+ + M +P T+ + L K + + L ++M+
Sbjct: 435 CVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMK 477
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 52/256 (20%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLD---SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
L+++ + + + K+AE T+ LLD S P + + +++ Y +G EKA +F M
Sbjct: 215 LILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLM 274
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G+P S V YNS + N ++ + + +M+R +P +Y L+IN YGKA +
Sbjct: 275 RERGVPQSTVTYNSLMSF---ETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARRE 331
Query: 241 FMALKLFNE-----------------------------------MRSHKCKPNICTYTAL 265
AL +F E MR +C P+IC+YT +
Sbjct: 332 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTM 391
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GC 314
++A+ E AE+ F +L+ G EP+V Y L++ Y IS + G
Sbjct: 392 LSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGI 451
Query: 315 EPDRASYNIMVDAYGR 330
+ ++A Y M+DAYG+
Sbjct: 452 KANQAIYTAMMDAYGK 467
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 89 LPPTHATWDDLINVSVQLR-LNKKWDPI----VLMSCVS-ILLIEAYGQKSLHKKAEFTY 142
+P + T++ L++ + ++K +D + + VS LLI AYG+ ++A +
Sbjct: 279 VPQSTVTYNSLMSFETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVF 338
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
E+LD+ PT Y +LL A+ +SG++++A VF+ MR+ P Y + + +
Sbjct: 339 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNA 398
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+ + A + F+R+K+D +P+ TY +I Y K S ++ + EM+ H K N Y
Sbjct: 399 SDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIY 458
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
TA+++A+ + A F+++ G+ PD A N L+
Sbjct: 459 TAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILL 497
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 23/229 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM---R 181
L+EAYG+ + KAE + +L S P+ TY L+LK + ++AE F +
Sbjct: 181 LMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDE 240
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKAS 238
K L P +++ I K GN +KA +IF M+ ST TY +++ Y + S
Sbjct: 241 KSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFETNYKEVS 300
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K++ ++M+ +P++ +Y L+NA+ + EEA +FE++ AG+ P AYN
Sbjct: 301 KTY------DQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 354
Query: 299 ALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEG 336
L++A+ + + C PD SY M+ AY A EG
Sbjct: 355 ILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEG 403
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 17/225 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++L+ AYG++ KAE + ++ P+ ++ L++AY KAE+VFR M
Sbjct: 144 LMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLS 203
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---KRDCCQPSTETYTLMINLYGKASK 239
G PSA+ Y + ++G ++A E F+ + ++ +P + + +MI +Y KA
Sbjct: 204 SGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGN 263
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K+F MR + TY +L++ E +E + ++Q+Q AG+ PDV +Y
Sbjct: 264 YEKARKIFGLMRERGVPQSTVTYNSLMSF---ETNYKEVSKTYDQMQRAGLRPDVVSYAL 320
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGL 333
L+ AY R + G P +YNI++DA+ +G+
Sbjct: 321 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 365
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E + +L+ AY G KAE VF +M K G PS + + + ++ KG KA +F
Sbjct: 139 SEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVF 198
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---CKPNICTYTALVNAF 269
+RM +PS TY L++ ++ + +K A + F + + KP+ + ++ +
Sbjct: 199 RRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMY 258
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---AYRLISRMH-----MGCEPDRASY 321
+ G E+A +IF ++ G+ YN+LM Y+ +S+ + G PD SY
Sbjct: 259 RKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFETNYKEVSKTYDQMQRAGLRPDVVSY 318
Query: 322 NIMVDAYGRAGLHE 335
++++AYG+A E
Sbjct: 319 ALLINAYGKARREE 332
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C ++ AY S + AE + L P TY L+K Y LEK + E
Sbjct: 386 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEE 445
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
M+ +G+ + +Y + +D K + AV F+ M P + ++++L
Sbjct: 446 MQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSL 499
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P TY+ L+ +CM L++A+ +F M
Sbjct: 315 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 374
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ I G K ++ +E+F+ M + +T TY +I +A MA
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
K+F +M S P+I TY+ L++ + G E+A +FE LQ + +EPD+Y YN ++E
Sbjct: 435 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +P+ Y M+ + R GL E
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 536
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 134 LHKKAE--FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
LH KA ++ + +R C P TY ++ C G ++ A ++ ++M K + V
Sbjct: 181 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 240
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLF 247
+Y + ID L N A+ +F M +P+ TY +I YG+ S A +L
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD---ASRLL 297
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
++M K PN+ T++AL++AF +EG EAE++++++ I+PD++ Y++L+ +
Sbjct: 298 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 357
Query: 305 -RLISRMHM-------GCEPDRASYNIMVDAYGRA 331
RL HM C P+ +YN ++ + +A
Sbjct: 358 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 392
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 70/337 (20%)
Query: 63 SPTAQQILRFVQREVDSNTI-----WDAF---DSLPPTHATWDDLINVSVQLRLNKKWDP 114
S ++ + ++R+++ N + DAF L +D++I S+ DP
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--------DP 342
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ LI + +A+ + ++ C P TY L+K +C + +E+
Sbjct: 343 DIFTYSS---LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN-- 232
+FREM + GL + V YN+ I GL + G+ A +IF++M D P TY+++++
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459
Query: 233 -LYGKASKSFMALK--------------------------------LFNEMRSHKCKPNI 259
YGK K+ + + LF + KPN+
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 519
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISR 309
YT +++ F R+GL EEA+ +F +++ G P+ YN L+ A LI
Sbjct: 520 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 579
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
M G D ++ +++++ LH+G+ S +E+
Sbjct: 580 MRSCGFVGDASTISMVINM-----LHDGRLEKSYLEM 611
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC + +A A+ +M P+ V +N+ I GL +AV +
Sbjct: 132 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 191
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM CQP TY ++N K +AL L +M K + ++ YT +++A
Sbjct: 192 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 251
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+A +F ++ GI P+V YN+L+ +A RL+S M P+ +
Sbjct: 252 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 311
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 312 FSALIDAFVKEG 323
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 146 LDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+D++ I P TY L++ C G A + +M + + P+ V +++ ID +K G
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A +++ M + P TY+ +IN + + A +F M S C PN+ TY
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ F + EE E+F ++ G+ + YN L++ A ++ +M G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD +Y+I++D + G
Sbjct: 445 VPPDIITYSILLDGLCKYG 463
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A C + A +F EM G+ P+ V YNS I L G A + M
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T++ +I+ + K K A KL++EM P+I TY++L+N F +
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR-----------ASYNIMV 325
EA+ +FE + P+V YN L++ + R+ G E R +YN ++
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421
Query: 326 DAYGRAG 332
+AG
Sbjct: 422 QGLFQAG 428
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +L+ +C L A AV +M K G P V +S ++G G +AV + +M
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
QP+T T+ +I+ L+ KAS+ A+ L + M + C+P++ TY +VN +
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASE---AVALIDRMVARGCQPDLFTYGTVVNGLCKR 217
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G + A + ++++ IE DV Y ++ +A L + M + G P+ +Y
Sbjct: 218 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277
Query: 322 NIMVDA---YGR 330
N ++ YGR
Sbjct: 278 NSLIRCLCNYGR 289
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A +F EM + PS V +N + + K + + +RM+ +Y +
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL + +M +P+I T ++L+N + EA + +Q+
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+P+ +N L+ EA LI RM GC+PD +Y +V+ + G
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 218
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR +P+ + LL A + ++ M+ + YN I+ +
Sbjct: 54 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 113
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P T + ++N Y + A+ L ++M + +PN T+
Sbjct: 114 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 173
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +++ G +PD++ Y ++ A L+ +M G
Sbjct: 174 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 233
Query: 314 -CEPDRASYNIMVDA 327
E D Y ++DA
Sbjct: 234 KIEADVVIYTTIIDA 248
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
++KA E++ IP TY+ +L C + +E A +F EM++ GL Y
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D K G ++A + F M+ C P+ TYT +I+ Y KA K A +LF M S
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD-----------------VYAY 297
C PNI TY+AL++ + G E+A +IFE++ G+ PD V Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIY 643
Query: 298 NALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
AL+ EA +L+ M M GCEP++ Y+ ++D + G
Sbjct: 644 GALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 689
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + + + + + C +G EKA +V REM G P Y+ +
Sbjct: 432 AEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLG 491
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + A +F+ MKR TYT+M++ + KA A K FNEMR C P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A E+FE + G P++ Y+AL++ + +M C+
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQ 609
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P + Y L+ C G L++A+ V EM ++G P + Y+S ID K A
Sbjct: 671 CEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 730
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT MI+ K K+ A KL M C+PN+ TYTA+++ F
Sbjct: 731 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
R G E E+ E++ G+ P+ Y L++
Sbjct: 791 GRIGKIETCLELLERMGSKGVAPNYVTYRVLID 823
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y LL +C +E+A + M G P+ +VY++ IDGL K G +A E+
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + TY+ +I+ Y K + +A K+ ++M + C PN+ YT +++ +
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G +EA ++ + ++ G +P+V Y A+++ + L+ RM G P+ +
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817
Query: 321 YNIMVDAYGRAGLHEGKCSYSLV-ELSVKHYPA 352
Y +++D + G + +++L+ E+ H+P
Sbjct: 818 YRVLIDHCCKNGALD--VAHNLLEEMKQTHWPT 848
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 28/237 (11%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++++ + L ++A + E+ + C P TY L+ AY + + A +F M
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-----------------KRDCCQPSTET 226
G P+ V Y++ IDG K G +KA +IF+RM + +P+
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVI 642
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +++ + K + A KL + M C+PN Y AL++ + G +EA+E+ ++
Sbjct: 643 YGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702
Query: 287 GAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAG 332
G +Y Y++L++ Y + R + C P+ Y M+D + G
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 759
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC------MSGLLEKAEAVFR 178
L+ AY H A +++ P Y +L+ + C LLE AE +
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYS 437
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ + + +S+ L G +KA + + M P T TY+ ++ AS
Sbjct: 438 EMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNAS 497
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K +A LF EM+ ++ TYT +V++F + GL E+A + F +++ G P+V Y
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 299 ALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKC 338
AL+ AY + + GC P+ +Y+ ++D + +AG E C
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKAC 608
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L D R P+ TY L++A+ + L+ A V REM L Y L K G
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGK 285
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+ + M+ + P T YT +I+ +AS A+ N MR+ C PN+ TY+
Sbjct: 286 WREALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ + + + + G P +N+L+ AY+L+ +M G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 314 CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
P YNI++ G + S L+EL+ K Y
Sbjct: 403 HTPGYVVYNILI---GSICGDKDSLSCHLLELAEKAY 436
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A ++L++ C P Y ++ C G ++A + + M + G
Sbjct: 716 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 775
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDG + G + +E+ +RM P+ TY ++I+ K +A
Sbjct: 776 CQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 835
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L EM+ + Y ++ F +E + E+ + +++ P + Y L++
Sbjct: 836 NLLEEMKQTHWPTHAAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSLYRLLVDNL 893
Query: 305 RLISRMHMG 313
R+ M
Sbjct: 894 IKAQRLEMA 902
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L++ YC SG A ++ + PS YN I LK A + + M
Sbjct: 205 VLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMS-- 262
Query: 219 CCQPSTETYTLMINLYG--KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +TL Y K K AL L M + P+ YT L++ L E
Sbjct: 263 LANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFE 319
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
EA + +++ P+V Y+ L+ R+++ M M GC P +N +V
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 326 DAYGRAGLHEGKCSYSLVELSVK--HYPA 352
AY +G H +Y L++ VK H P
Sbjct: 380 HAYCTSGDHSY--AYKLLKKMVKCGHTPG 406
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 52/237 (21%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y L+ C + L E+A MR P+ V Y++ + G L +
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL----- 265
+ M + C PS + + +++ Y + A KL +M P Y L
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSIC 418
Query: 266 --------------------------------VNAFAR----EGLCEEAEEIFEQLQGAG 289
V++F R G E+A + ++ G G
Sbjct: 419 GDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 290 IEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
PD Y+ ++ S+M + G D +Y IMVD++ +AGL E
Sbjct: 479 FIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
++++ + + K+AE + LLD + P + Y +++ Y +G +KA VF M
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G+P S V YNS + N ++ +I+ +M+R QP +Y L+I YG+A +
Sbjct: 274 VGKGVPQSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARRE 330
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL +F EM +P Y L++AFA G+ E+A+ +F+ ++ I PD+++Y +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRA 331
+ AY + R+ + G EP+ +Y M+ Y +A
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKA 432
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++LI AYG+ AE L P +Y L+++Y G AEA+FR M+
Sbjct: 143 LMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---KRDCCQPSTETYTLMINLYGKASK 239
G PSAV Y + ++G ++A E+F+ + K+ +P + Y +MI +Y KA
Sbjct: 203 SGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K+F+ M + TY +L++ E +E +I++Q+Q +GI+PDV +Y
Sbjct: 263 YDKARKVFSSMVGKGVPQSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGIQPDVVSYAL 319
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
L++AY R + G P +YNI++DA+ +G+ E
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 366
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 97/181 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG+ ++A + E+LD+ PT Y +LL A+ +SG++E+A+ VF+ MR+
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y + + + + + A + F+R+K D +P+ TY MI Y KA+
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKM 438
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++++ +MR K N T +++A R A +++++ G+ PD A N L+
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSL 498
Query: 304 Y 304
Y
Sbjct: 499 Y 499
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ S P +YALL+KAY + E+A +VF EM G+ P+ YN
Sbjct: 295 YKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD P +YT M++ Y AS A K F ++
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------- 303
+PNI TY ++ +A+ E+ E++E+++ +GI+ + +M+A
Sbjct: 415 FEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSAL 474
Query: 304 --YRLISRMHMGCEPDRASYNIMVDAY 328
Y+ + G PD+ + N+++ Y
Sbjct: 475 GWYKEME--SCGVPPDQKAKNVLLSLY 499
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E + +L+ AY G AE V + K G P+ + Y + ++ +GG A IF
Sbjct: 138 SEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---CKPNICTYTALVNAF 269
+RM+ +PS TY +++ + + K A ++F + K KP+ Y ++ +
Sbjct: 198 RRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---AYRLISRMH-----MGCEPDRASY 321
+ G ++A ++F + G G+ YN+LM Y+ +S+++ G +PD SY
Sbjct: 258 KKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGIQPDVVSY 317
Query: 322 NIMVDAYGRAGLHEGKCS 339
+++ AYGRA E S
Sbjct: 318 ALLIKAYGRARREEEALS 335
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 12/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A + L ++A + + + + P +Y L+ A+C + L +A V+ EM + G
Sbjct: 305 LLVALANEGLGREARQVF-DKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 363
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VV+N+ I+GLL+G +A+++F+ MK P+ TYT++I + K K MA+
Sbjct: 364 MKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAM 423
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F EM+ +C+P++ TYT L+ + + + E++ G PD YNAL+
Sbjct: 424 ECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLL 483
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+A R+ +M G EP +YN+M+ +Y
Sbjct: 484 TNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSY 518
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A + E+ ++RC P TY LL Y + +++ AV EM +
Sbjct: 408 MLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQK 467
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-M 242
G PP A YN+ I L P A I+++M + +P+ TY +M+ Y +++ M
Sbjct: 468 GCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAM 527
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ EM P++ +YT +N R G EEA + E++ G+ YN
Sbjct: 528 GCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYN 583
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + + +K++ +G ++ A VF M+K G +N + L G ++A ++F +
Sbjct: 265 DAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDK 324
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P +YT ++ + A A +++NEM KP++ + ++ R
Sbjct: 325 MHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQR 383
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNI 323
EA ++FE ++ G P+V+ Y L+ + +M M C+PD A+Y
Sbjct: 384 RPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTC 443
Query: 324 MVDAYGRA 331
++ YG A
Sbjct: 444 LLVGYGNA 451
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + + Y + L K + V I Q M + S + + + I + A + A
Sbjct: 225 GFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGK-VGALSMDAFKVAIKSFAAAGEIKNA 283
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ +F M+ + + ++ L+ A A EGL EA ++F+++ G PD+ +Y ALM
Sbjct: 284 VGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQ-YSPDLRSYTALMLA 342
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
EA R+ + M G +PD +N M++ R
Sbjct: 343 WCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRG 381
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + + K AE E+ P E TY+LL+ AY +G E A + +EM G
Sbjct: 305 LLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G+ QKA + + M+ +P Y +MI+ +GK + A+
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAM 424
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
FN+MR +P++ T+ L++A + G + A E+FE+++ + P YN ++
Sbjct: 425 DAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLL 484
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++S M G P+ +Y +VD YGR+G
Sbjct: 485 GEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG 523
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F +MR+ G+ P V +N+
Sbjct: 386 QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTL 445
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A E+F+ M+ C P T TY +MINL G+ + +EM+
Sbjct: 446 IDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGL 505
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY
Sbjct: 506 VPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + H +A + E+ +S C P TY +++ E EA+ EM++ G
Sbjct: 445 LIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y + +D + G ++A++ + MK D +PS Y ++N Y + + AL
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 564
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M++ + +I +L+NAF + EA + + ++ G+ PDV Y LM+A
Sbjct: 565 NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKAL 624
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAGL 333
+ + + GC PDR + ++ R+GL
Sbjct: 625 IRVEQFDKVPVIYEEMITSGCAPDRKARAML-----RSGL 659
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM+
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A++ F +M+ + +P T+ +I+ + K + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRA 458
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF EMR C P TY ++N + E E + +++ G+ P++ Y L++
Sbjct: 459 AELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
Y R G +P Y+ +V+AY + GL
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A G +AE +LE L P Y LLK Y L+ AE V EM +
Sbjct: 269 LISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQC 328
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G K+
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM++ +P+ Y +++ F + A + F +++ GIEPDV +N L
Sbjct: 389 FAVLR---EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTL 445
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++A+ L M C P +YNIM++ G EG
Sbjct: 446 IDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEG 492
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC----CQPSTETYTLMINLYG 235
+R++ P Y+ + LL +P A + +R+ D +P ++ +I+ +
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAA-LLERLLGDLRESRLEPDAPLFSDLISAFA 239
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDV 294
+A+ AL+L ++ P TAL++A G EAE +F + AG I+P
Sbjct: 240 RAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 295 YAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I+ + G PD A+Y+++VDAY RAG
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P TY+ L+ +CM L++A+ +F M
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ I G K ++ +E+F+ M + +T TY +I +A MA
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
K+F +M S P+I TY+ L++ + G E+A +FE LQ + +EPD+Y YN ++E
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +P+ Y M+ + R GL E
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 20/215 (9%)
Query: 134 LHKKA-EFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
LH KA E L +++ C P TY ++ C G ++ A ++ ++M K + V
Sbjct: 197 LHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLF 247
+YN+ IDGL K + A +F +M+ +P TY +I+ YG+ S A +L
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSD---ASRLL 313
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
+ M K PN+ T++AL++AF +EG EAE++++++ I+PD++ Y++L+ +
Sbjct: 314 SNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 305 -RLISRMHM-------GCEPDRASYNIMVDAYGRA 331
RL HM C P+ +YN ++ + +A
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 145/337 (43%), Gaps = 70/337 (20%)
Query: 63 SPTAQQILRFVQREVDSNTI-----WDAF---DSLPPTHATWDDLINVSVQLRLNKKWDP 114
S ++ + ++R+++ N + DAF L +D++I S+ DP
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--------DP 358
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ LI + +A+ + ++ C P TY L+K +C + +E+
Sbjct: 359 DIFTYSS---LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN-- 232
+FREM + GL + V YN+ I GL + G+ A +IF++M D P TY+++++
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 233 -LYGKASKSFMALK--------------------------------LFNEMRSHKCKPNI 259
YGK K+ + + LF + KPN+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISR 309
YT +++ F R+GL EEA+ +F +++ G PD YN L+ A LI
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 595
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
M G D ++ +++++ LH+G+ S +E+
Sbjct: 596 MRSCGFVGDASTISMVINM-----LHDGRLEKSYLEM 627
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC S + A A+ +M + G P V +N+ I GL +AV +
Sbjct: 148 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 207
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M + CQP TY ++N K +AL L +M K + ++ Y +++ +
Sbjct: 208 VDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 267
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F +++ GI PDV+ YN+L+ +A RL+S M P+ +
Sbjct: 268 YKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVT 327
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 328 FSALIDAFVKEG 339
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +L+ +C L A AV +M K G P V +S ++G AV + +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+P T T+ +I+ L+ KAS+ A+ L ++M C+P++ TY A+VN +
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASE---AVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASY 321
G + A + ++++ IE DV YN ++ +A+ L ++M G PD +Y
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293
Query: 322 NIMVDA---YGR 330
N ++ YGR
Sbjct: 294 NSLISCLCNYGR 305
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ C ++ A A+F +M G+ P YNS I L G A + M
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T++ +I+ + K K A KL++EM P+I TY++L+N F +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR-----------ASYNIMV 325
EA+ +FE + P+V YN L++ + R+ G E R +YN ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 326 DAYGRAG 332
+AG
Sbjct: 438 QGLFQAG 444
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 135 HKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
H F ++++ I P TY L+ C G A + M + + P+ V ++
Sbjct: 270 HIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFS 329
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ ID +K G +A +++ M + P TY+ +IN + + A +F M S
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------A 303
C PN+ TY L+ F + EE E+F ++ G+ + YN L++ A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ +M G PD +Y+I++D + G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A +F EM + PS V +N + + K + + +RM+ +Y +
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL + +M +P+I T ++L+N + +A + +Q+ G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+PD +N L+ EA L+ +M GC+PD +Y +V+ + G
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRG 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR +P+ + LL A + ++ M+ + YN I+ +
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P T + ++N Y + + A+ L ++M KP+ T+
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFN 189
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +Q+ G +PD+ Y A++ A L+ +M G
Sbjct: 190 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 314 -CEPDRASYNIMVDA 327
E D YN ++D
Sbjct: 250 KIEADVVIYNTIIDG 264
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C G +EKA+ +F EM K+GL + Y I GL K G ++ E+
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M+ P+ TY ++N K ++ A K+F+EMR NI TY L+ R
Sbjct: 256 YEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
E EA E+ +Q++ GI P++ YN L++ + + ++ G P +
Sbjct: 316 EMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375
Query: 321 YNIMVDAYGRAGLHEG 336
YNI+V + + G G
Sbjct: 376 YNILVSGFCKKGDTSG 391
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + K+ Y ++ + P TY ++ C G + A VF EMR+
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRER 297
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V YN+ I GL + +A E+ +MK D P+ TY +I+ + K A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKA 357
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L L +++S P++ TY LV+ F ++G A ++ ++++ GI+P Y L++
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDT 417
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAY 328
+ +L S M +G PD +Y++++ +
Sbjct: 418 FARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF 453
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C +A V +M+ G+ P+ + YN+ IDG KA+ + + +
Sbjct: 305 TYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDL 364
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K PS TY ++++ + K + A K+ EM KP+ TYT L++ FAR
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIM 324
E+A ++ ++ G+ PDV+ Y+ L+ + + RM+ EP+ YN M
Sbjct: 425 EKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTM 484
Query: 325 VDAYGRAG 332
V Y + G
Sbjct: 485 VLGYCKEG 492
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C L KA ++ R+++ GL PS V YN + G K G+ A ++
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +PS TYT++I+ + ++ A++L + M P++ TY+ L++ F
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+G EA +F+ + EP+ YN ++ Y RL M P+ AS
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515
Query: 321 YNIMVDA 327
Y M++
Sbjct: 516 YRYMIEV 522
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + +K A E+ + P++ TY +L+ + S +EKA + M +
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEEL 437
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P Y+ I G G +A +F+ M +P+ Y M+ Y K S+ A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRA 497
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+LF EM + PN+ +Y ++ +E +EAE + E++ +GI P N + A
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 45/219 (20%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS---------------------- 194
Y +++ AY S L+ + F EM G P + +N+
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 195 ------------YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
I G + G +K+ ++ ++ P+ YT +I+ K +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A LF EM N TYT L++ + G+ ++ E++E++Q G+ P+++ YN +M
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+A+++ M G + +YN ++ R
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY L+ +Y + L A VF EM++ G P V Y + ID K G
Sbjct: 405 QMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAG 464
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E++QRM+ P T TY+++IN GKA A KLF EM C PN+ TY
Sbjct: 465 FLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYN 524
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
++ A+ + A +++ +Q AG +PD Y+ +M EA + S M
Sbjct: 525 IMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRK 584
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 585 NWVPDEPVYGLLVDLWGKAG 604
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 18/253 (7%)
Query: 108 LNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
+NK D +V C + LI +YG+ + A + E+ C P TY L+
Sbjct: 399 INKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLID 458
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
+ +G L+ A +++ M+ GL P Y+ I+ L K G+ A ++F M C P
Sbjct: 459 IHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVP 518
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+ TY +MI L KA ALKL+ +M+S +P+ TY+ ++ G +EAE +F
Sbjct: 519 NLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVF 578
Query: 283 EQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+++ PD Y L++ A++ M + G P+ + N ++ A+ R
Sbjct: 579 SEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLR- 637
Query: 332 GLHEGKCSYSLVE 344
+H+ +Y+L++
Sbjct: 638 -VHKLADAYNLLQ 649
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E+++ C+P TY +++ + + A ++R+M+
Sbjct: 490 VIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSA 549
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G +A +F MKR P Y L+++L+GKA A
Sbjct: 550 GFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKA 609
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M + +PN+ T +L++AF R +A + + + G+ P + Y L+
Sbjct: 610 WQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLL 667
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 20/141 (14%)
Query: 208 AVEIFQRMKRDCCQP----STETYTLMINLYGKASKSFMAL-KLFNEMRSHKCKPNICTY 262
A+ F +KR QP TYT M+ + G+A K F A+ KL ++M C+PN+ TY
Sbjct: 363 ALNFFYWLKR---QPGFNHDGHTYTTMVGILGRA-KQFGAINKLLDQMVKDGCQPNVVTY 418
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH- 311
L++++ R +A ++F ++Q G EPD Y L++ A + RM
Sbjct: 419 NRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQA 478
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
G PD +Y+++++ G+AG
Sbjct: 479 AGLSPDTFTYSVIINCLGKAG 499
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + ++ A Y ++ + P + TY+++++ G L++AEAVF EM++
Sbjct: 525 IMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRK 584
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN +KA + +Q M +P+ T +++ + + K A
Sbjct: 585 NWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADA 644
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
L M P++ TYT L++ C EA ++
Sbjct: 645 YNLLQSMLELGLNPSLQTYTLLLSC------CTEARSPYD 678
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 35/205 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G +AE + E+ +P E Y LL+ + +G +EKA ++ M
Sbjct: 560 IVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNT 619
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----------- 232
GL P+ NS + L+ A + Q M PS +TYTL+++
Sbjct: 620 GLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEARSPYDM 679
Query: 233 --------LYGKASKSFM----------------ALKLFNEMRSHKCKPNICTYTALVNA 268
+ G + F+ A K + M S + A+V+
Sbjct: 680 GIYCELMAVTGHPAHMFLLSLPSAGPDGQNVRDHASKFLDLMHSEDRESKRGLVDAVVDF 739
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPD 293
+ GL EEA ++E + PD
Sbjct: 740 LHKSGLKEEAGSVWEVAAQRNVYPD 764
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY L+K CM + +A +F M+K G P+ V Y + I GL + GN A++
Sbjct: 158 IPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALK 217
Query: 211 IFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ Q M C+P+ +Y ++I+ K K A +LFNEM +P++ T++A
Sbjct: 218 LHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSA 277
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMG 313
L++ +EG+ EA++ E + GI PD++ + +L+E + L+ + G
Sbjct: 278 LIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKG 337
Query: 314 CEPDRASYNIMVDAYGRA 331
EPD SY +++ Y +
Sbjct: 338 YEPDVISYTVLIYGYCKT 355
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 3/196 (1%)
Query: 109 NKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
+K ++P V+ V LI Y + ++A Y E+L P T+ +LLK ++G
Sbjct: 335 SKGYEPDVISYTV---LIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+ A+ +F ++ + +P + + + ++DGL K G +A+E+F +K + E++
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFN 451
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ KA K A +LF ++ +P++ TY ++N F + G + A +F+ ++
Sbjct: 452 CLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEEN 511
Query: 289 GIEPDVYAYNALMEAY 304
G P++ Y+AL+ +
Sbjct: 512 GCTPNLLTYSALLHGF 527
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+LE + R +P T+ L++ +C+ G L+ A+ +F M G P + Y I G
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC 353
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K N ++A++++ M R P +T+ +++ A K A KLF ++ H N+
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
+ ++ + G EA E+F +L+ ++ D+ ++N L++ A+ L ++
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473
Query: 311 HM-GCEPDRASYNIMVDAYGRAG 332
G +PD +Y IM++ + + G
Sbjct: 474 SQEGLQPDVVTYCIMINGFCKNG 496
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 126 IEAYGQK-SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I+ Y Q SL+KK L P T +L+ C + + + + + G
Sbjct: 104 IKHYSQVFSLYKKMHLAGLS-------PNFFTLNILINCLCNVNRVREGLSAMAGIMRRG 156
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S I GL +A +F RM++ C P+ TY +I + +AL
Sbjct: 157 YIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLAL 216
Query: 245 KLFNEMRSH------KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
KL EM + CKPNI +Y +++ + G +EA+ +F ++ G+ PDV ++
Sbjct: 217 KLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFS 276
Query: 299 AL----------MEAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
AL +EA + + M + G PD ++ +++ + G
Sbjct: 277 ALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVG 321
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++ L C +G L +A +F E++ Y + +N IDGL K + A E+F+++ +
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ QP TY +MIN + K + A LF M + C PN+ TY+AL++ F + EE
Sbjct: 476 EGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEE 535
Query: 278 AEEIFEQLQGAGIEPDV 294
++ ++ I+ DV
Sbjct: 536 VVKLLHKM----IQKDV 548
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ YC + +E+A ++ EM + G P + + GL G A ++
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K + ++ ++ K F A++LFNE++S+ K +I ++ L++ +
Sbjct: 400 FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCK 459
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---------RLISRM--HMGCEPDRAS 320
E A E+FE+L G++PDV Y ++ + ++ +M GC P+ +
Sbjct: 460 ARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLT 519
Query: 321 YNIMVDAY 328
Y+ ++ +
Sbjct: 520 YSALLHGF 527
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 6/202 (2%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +++ C G ++A+ +F EM G+ P V +++ ID L K G +A
Sbjct: 233 CKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAK 292
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M P T+T +I + A +LF M S +P++ +YT L+ +
Sbjct: 293 KFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGY 352
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG------CEPDRASYNI 323
+ EEA +++ ++ G PD+ + L++ L ++ +P N+
Sbjct: 353 CKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNL 412
Query: 324 MVDAYGRAGLHEGKCSYSLVEL 345
+ + GL + C + +EL
Sbjct: 413 YICSVFLDGLCKNGCLFEAMEL 434
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 17/195 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ LLL A + +++++M GL P+ N I+ L ++ + +
Sbjct: 93 SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGI 152
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R P TYT +I + A +LF M+ C PN+ TY L+ R G
Sbjct: 153 MRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNI 212
Query: 276 EEAEEIF-EQLQGA-----GIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
A ++ E L G +P++++YN ++ EA RL + M G PD
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDV 272
Query: 319 ASYNIMVDAYGRAGL 333
+++ ++D + G+
Sbjct: 273 VTFSALIDTLCKEGM 287
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+++ L+ C + LE A +F ++ + GL P V Y I+G K G A +FQ
Sbjct: 448 ESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQM 507
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M+ + C P+ TY+ +++ + K +K +KL ++M YT + + +++
Sbjct: 508 MEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEK 567
Query: 275 CEEAEEIFEQL 285
C E +I ++
Sbjct: 568 CREWLDILQRF 578
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 24/163 (14%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
++GLP +I KG +A++ F M R S ++ L++ K
Sbjct: 60 QHGLP-------MFIHNCKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHY 107
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
L+ +M PN T L+N E + G PDV Y +L
Sbjct: 108 SQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSL 167
Query: 301 M----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ EA RL RM +GC P+ +Y ++ R G
Sbjct: 168 IKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTG 210
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 45/88 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ +C +G ++ A +F+ M + G P+ + Y++ + G K ++ V++
Sbjct: 480 PDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKL 539
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
+M + + YT++ ++ K K
Sbjct: 540 LHKMIQKDVSLAASIYTIVEDMVSKDEK 567
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 8/220 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YG+ ++ +KA T PT TY+ +++ + G ++ ++++M K
Sbjct: 36 LIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAK 95
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P +N ID L K ++A +F M + P TYT++I G + +
Sbjct: 96 FVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVM 155
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF M + C+PN+ TY ++++AF G +EA +IF+Q+ G++PD YN L++A+
Sbjct: 156 KLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAF 215
Query: 305 RLISRMHMGCE--------PDRASYNIMVDAYGRAGLHEG 336
++ + + +YN ++ + GR G +G
Sbjct: 216 GKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQG 255
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ E TYA+L++ +G +E ++ EM + V N+ +D L K G + A E
Sbjct: 269 VSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFE 328
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+FQ MK T TY ++IN G+A K A L EM + C PNI TY L++++
Sbjct: 329 LFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYG 388
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
+ A +F +++ G+ P+V +Y++L+E + R GC P+
Sbjct: 389 KWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHV 448
Query: 320 SYNIMVDAYGRAG 332
+YN+++D RAG
Sbjct: 449 TYNLLIDCLIRAG 461
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +G L+ A A+ EM + G P+ + YN+ I K N A +F M
Sbjct: 344 TYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEM 403
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P+ +Y+ +I +GKA ++ A+ LF EM++ C PN TY L++ R G
Sbjct: 404 KERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRF 463
Query: 276 EEAEEIFEQLQGAG 289
A E +++ AG
Sbjct: 464 GAAMEYLREMRDAG 477
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI G+ A LE+ ++ C P TY L+ +Y L A +F EM++
Sbjct: 347 ILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKER 406
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ V Y+S I+G K G A+ +F+ MK + C P+ TY L+I+ +A + A
Sbjct: 407 GVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAA 466
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
++ EMR C+ T + LV + EEA+ F++
Sbjct: 467 MEYLREMRDAGCQMGKVTKSLLVRIPPQ--YMEEAQSFFQE 505
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 14/227 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A+G+ ++A F ++ SR E TY LL + G ++ +F +M+
Sbjct: 210 ILIDAFGKTGQLERA-FDFVG--KSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAK 266
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL + + Y I+ L G + +++ M + + T +++ KA + A
Sbjct: 267 GLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAA 326
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF +M+ + TY L+N R G + A + +++ G P++ YN L+ +
Sbjct: 327 FELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISS 386
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
Y RL M G P+ SY+ +++ +G+AG + S
Sbjct: 387 YGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAIS 433
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 104/252 (41%), Gaps = 43/252 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ + ++A + ++ P TY +L+++ G ++ +F M
Sbjct: 105 ILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQ 164
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA------ 237
G P+ Y+S + G +A +IFQ+M + QP TY ++I+ +GK
Sbjct: 165 GCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA 224
Query: 238 ------SKSFM--------------------ALKLFNEMRSHKCKPNICTYTALVNAFAR 271
S+SF ++LF +M++ N TY L+
Sbjct: 225 FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGW 284
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
G E+ +++ ++ I+ D+ N +++ A+ L M G D +
Sbjct: 285 AGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVT 344
Query: 321 YNIMVDAYGRAG 332
YNI+++ GRAG
Sbjct: 345 YNILINGLGRAG 356
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
++N+ I + +KA++ ++ +P+ TY+ MI ++ K L ++ +M
Sbjct: 32 LFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQM 91
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
K P+ T+ L+++ A+ EEA +F + + PDVY Y L+ + I R+
Sbjct: 92 LKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRI 151
Query: 311 H-----------MGCEPDRASYNIMVDAYGRAGLHEGKC 338
GC+P+ +Y+ ++ A+G AG + C
Sbjct: 152 DAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEAC 190
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/129 (18%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + M++D + T+ + +I++YG+A+ AL+ +P TY++++ F
Sbjct: 17 LVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVF- 75
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGR 330
++G ++ + Y +++A + PD ++NI++D+ +
Sbjct: 76 --------------MKGGDVQNGLLMYKQMLKAKFV---------PDHTTFNILIDSLAK 112
Query: 331 AGLHEGKCS 339
A E C+
Sbjct: 113 ADQVEEACN 121
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 15/218 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I+A + KAE ++ P TY+ ++ Y G L++A +FREM+K
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ V NS++ L K G ++A E F M +P +Y + L+G AS+ A
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTL--LHGYASEGCFA 422
Query: 244 --LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ LFN M+S+ N +T L++A+A+ G+ ++A IF ++Q G+ PDV Y+ ++
Sbjct: 423 DMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 302 EAYRLISRMH-----------MGCEPDRASYNIMVDAY 328
+ + R+ G +P+ A Y+ ++ +
Sbjct: 483 STFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
++++A S+ ++A L+++ + C P Y+ ++ + G KA ++F EM
Sbjct: 233 IVLKALCDNSMSQRA-LDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEM 291
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G+ P V YN ID L K KA + ++M D QP T TY+ MI+ Y +
Sbjct: 292 TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRL 351
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A K+F EM+ PNI T + + + + G +EA E F+ + G +PD+++Y L
Sbjct: 352 KEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTL 411
Query: 301 MEAYR----------LISRMHM-GCEPDRASYNIMVDAYGRAGL 333
+ Y L + M G + + I++ AY + G+
Sbjct: 412 LHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGM 455
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
V +LI AY ++ + A + E+ P TY+ ++ + G L A F +M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASK 239
G+ P+ VY+S I G G KA E+ M + +P ++ +IN K +
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +F+ +P + T+ +L++ + G ++A +I + ++ G+EPD+ YN
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
L++ Y R++ G +P+ +Y IM+ RAG
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ YC+ G ++KA + M G+ P V YN+ +DG K G + +
Sbjct: 579 PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTL 638
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R +P+T TY +M+ +A ++ A K F+EM + Y ++ R
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
+EA +F++L ++ + N ++ A + R G P+ ++
Sbjct: 699 NNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758
Query: 321 YNIMV 325
Y +M+
Sbjct: 759 YGVMI 763
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 47/228 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL Y G +F M+ G+ + V+ I K G A+ I
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M++ P TY+ +I+ + + + A++ FN+M + +PN Y++++ F
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522
Query: 272 EG-------------------------------LCE-----EAEEIFEQLQGAGIEPDVY 295
G LC+ +A +IF+ G P V
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVI 582
Query: 296 AYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+N+L++ Y L+ +M +G EPD +YN ++D Y + G
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNG 630
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 156 TYALLLKAYCMSGLLEKA-EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
T LLK C + E+A + M + G P+AV Y+ + L Q+A+++ Q
Sbjct: 194 TANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQM 253
Query: 215 MKRD--CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M + C P Y+ +I+ + ++ A LF+EM KP++ TY +++A +
Sbjct: 254 MAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
++AE + Q+ G +PD Y+ ++ Y + R+
Sbjct: 314 RAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRL 351
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PT TY +L+ C + + A+F + + GL + N+ + L ++AV
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213
Query: 211 I-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--RSHKCKPNICTYTALVN 267
+ RM C P+ +Y++++ S S AL L M + C P++ Y+ +++
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHM--------GCEP 316
F EG +A +F ++ G++PDV YN +++A R + + + G +P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333
Query: 317 DRASYNIMVDAYGRAG 332
D +Y+ M+ Y G
Sbjct: 334 DTVTYSCMIHGYATLG 349
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 151 IPTEDT--YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
IP D ++ ++ + C G + A +F G P + +NS IDG G KA
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+I M+ +P TY +++ Y K + L LF EM+ KPN TY ++
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
R G A + F ++ +G V Y ++
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 11/238 (4%)
Query: 75 REVDSNTIWDAFDSLP--PTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI-------- 123
R +D++ I+D + P T++ LI+ + +++K + + M V +
Sbjct: 561 RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYN 620
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ Y + + E+ P TY ++L +G A F EM +
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + +Y + GL + +A+ +FQ++ + S MIN K + A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+LF + + PN TY ++ ++G E+A +F ++ +GI P N ++
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRII 798
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+N K+ +L + +I A + ++A+ + + S +P E TY +++
Sbjct: 715 MNVKFSITILNT-----MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKD 769
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G +E A +F M K G+ P + + N I LL+ G KA ++ T
Sbjct: 770 GGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTT 829
Query: 228 TLMINLYGKASKSFMALKLF 247
+LM++L+ + K +KL
Sbjct: 830 SLMLSLFSRKGKYQEDIKLL 849
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++A + E++ P T+ L+ C +G +E A + M
Sbjct: 572 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 631
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+PP+ V YN+ + GL K G ++A + + M C P + TY ++ +AS++ A
Sbjct: 632 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 691
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+L +E++S P+ TY LV+ + G E+A + E++ G G PDV YN L+
Sbjct: 692 LQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDS 751
Query: 302 --------EAYRL----ISRMHMGCEPDRASYNIMVDAYGRAG 332
EA RL SR+ C P+ +Y+++++ + G
Sbjct: 752 LCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVG 794
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGL-----LEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
LLD+ +P DTYA C++GL + +A V+ M + L P V +N I G
Sbjct: 523 LLDA--MPDPDTYAF---NCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGA 577
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K GN ++A +F+ M QP T+ +I+ KA + A + + M + PN+
Sbjct: 578 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 637
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TY ALV+ + G EEA + E++ +G PD Y +L+ +A +L+S
Sbjct: 638 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 697
Query: 310 M-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ G +PD +YNI+VD ++G E + + H+P
Sbjct: 698 LKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP 740
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 157 YALLLKAYCMSGLLEKAEAVFR-EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y ++L++ C +G +A +FR EM + G+ P+ V YN+ I+GL K +E+F+ +
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P TY +I+ KA A +L +M S C PN+ TY+ L+N + G
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 276 EEAEEIFEQL--QGAGIEPDVYAYNALMEAYRLISRMHMGCE-------------PDRAS 320
+EA E+ +++ + + P++ YN+ ++ S CE PD +
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362
Query: 321 YNIMVDAYGRAGLHEGKCS 339
++ ++D + G + CS
Sbjct: 363 FSTLIDGLCKCGQIDEACS 381
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ EL++ P TY L+ + C +G LE+A + +M P+ V Y+ I+GL K
Sbjct: 239 FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCK 298
Query: 202 GGNPQKAVEIFQRMKRDCCQ--PSTETYTLMINLYGKASKSFMALKLFNEMR--SHKCKP 257
G +A E+ Q M R C P+ TY ++ K S + A +L +R S + P
Sbjct: 299 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 358
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLI 307
+ T++ L++ + G +EA +F+ + G P+V YNAL+ A+ +I
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRA 331
M G PD +Y+++VDA+ +A
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKA 443
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P T++ L+ C G +++A +VF +M G P+ + YN+ ++GL K ++A
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 414
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ + M P TY+++++ + KAS+ AL+L + M S C PN+ T+ ++++
Sbjct: 415 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 474
Query: 269 FAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAYRLISR-------MHMGCEPDRAS 320
+ EA ++F+ + G+ PD Y L++ R + +PD +
Sbjct: 475 LCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYA 534
Query: 321 YNIMVDAYGRAG 332
+N ++ + G
Sbjct: 535 FNCCINGLSKLG 546
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 55/234 (23%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV-- 209
P TY +L+ SG E+A V EM G P V YN+ ID L K G+ ++A
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764
Query: 210 --EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK--PNICTYTAL 265
++ R+ R CC P+ TY+++IN K + A +L EM C PNI TY +
Sbjct: 765 HGDMSSRVSR-CCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823
Query: 266 VNAFARE--------------------------------GLC-----EEAEEIFEQLQGA 288
++ ++ GLC +EA +F+ +
Sbjct: 824 LDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883
Query: 289 GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
G P+V YN LM A+ +I M G PD +Y+++VDA+ +A
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P T++ L+ C G ++A VF +M G P+ V YN ++GL K ++A
Sbjct: 849 RVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERA 908
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ + M P TY+++++ + KAS AL+L + M S C PN+ T+ ++++
Sbjct: 909 HAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDG 968
Query: 269 FAREGLCEEAEEIF--------------------------------EQLQGAGIEPDVYA 296
+ EA ++F E L A +PD YA
Sbjct: 969 LCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYA 1028
Query: 297 YNA-------LMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+N L + R + RM + PD+ ++NI++ +AG E
Sbjct: 1029 FNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFE 1075
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 43/259 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + ++A ++D P TY++L+ A+C + +++A + M G
Sbjct: 401 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 460
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---------KRDCC--------------- 220
P+ V +NS IDGL K +A ++F M K C
Sbjct: 461 CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520
Query: 221 --------QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
P T + IN K AL+++N M + P+ T+ L+ +
Sbjct: 521 EALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKA 580
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYRLISRM--HMGCEPDRASY 321
G E+A +FE++ ++PDV + AL+ EA R I + ++G P+ +Y
Sbjct: 581 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 640
Query: 322 NIMVDAYGRAGLHEGKCSY 340
N +V ++G E C +
Sbjct: 641 NALVHGLCKSGRIEEACQF 659
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 46/187 (24%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT----------------------- 228
+N Y++ L+K G+P KA+++F+ C+P+ TY+
Sbjct: 114 FNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRI 173
Query: 229 -----------LMINLYGKASKSFMALKLF-NEMRSHKCKPNICTYTALVNAFAREGLCE 276
+++ +A ++ AL++F EM P I TY ++N +
Sbjct: 174 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 233
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
E+FE+L G PDV YN L+ EA RL M C P+ +Y++++
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293
Query: 326 DAYGRAG 332
+ + G
Sbjct: 294 NGLCKVG 300
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMR- 181
+L++A+ + S H L + SR C P T+ ++ C S +A +F +M
Sbjct: 929 VLVDAFCKAS-HVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTL 987
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR------DCC--------------- 220
K+GL P + Y + IDGL + G +A + M +CC
Sbjct: 988 KHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALH 1047
Query: 221 -------QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
P T+ ++I KA A LF EM + +P++ T+ AL++ + G
Sbjct: 1048 RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107
Query: 274 LCEEAEEIF 282
E +I
Sbjct: 1108 QVEATWDIM 1116
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 31/227 (13%)
Query: 140 FTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
FTY LLD+ C +P TY+ ++ Y +G L+ A +F E
Sbjct: 219 FTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNE 278
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G+ V YN+ + K G ++A+++ + M+ + TY ++ YGK K
Sbjct: 279 MKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYK 338
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ K+F EM++ PN+ TY+ L++ +++ GL EA ++F + + AG++ DV Y+A
Sbjct: 339 YDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSA 398
Query: 300 LME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L++ A L+ M G P+ +YN ++DA+GR E
Sbjct: 399 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTE 445
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + K+ + E+L + P T+ LL GL E A ++ EM
Sbjct: 153 VIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNR 212
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN+ +D + KGG A EI M P+ TY+ MI+ Y KA + A
Sbjct: 213 GIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 272
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LFNEM+ + +Y L++ +A+ G EEA ++ +++ +GI DV YNAL+
Sbjct: 273 RNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGG 332
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLH 334
Y ++ M P+ +Y+ ++D Y + GL+
Sbjct: 333 YGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLY 374
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVEIFQR 214
++ ++ AY SG +A +F M+ YGL P+ V YN+ ID KGG ++ +EIF
Sbjct: 114 AFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDE 173
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R+ QP T+ ++ + K A L EM + +I TY L++A + G
Sbjct: 174 MLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQ 233
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
+ A EI ++ I P+V Y+ +++ Y R+ +G DR SYN
Sbjct: 234 LDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNT 293
Query: 324 MVDAYGRAGLHE 335
++ Y + G E
Sbjct: 294 LLSIYAKLGRFE 305
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG++ + + E+ P TY+ L+ Y GL +A VFRE +K G
Sbjct: 329 LLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAG 388
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG--------- 235
L V+Y++ ID L K G + AV + M ++ +P+ TY +I+ +G
Sbjct: 389 LKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVV 448
Query: 236 --------------------KASKSFMA-------------------------------- 243
KA+KS +A
Sbjct: 449 DDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMC 508
Query: 244 -LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
L +F++M + KPN+ T++A++NA +R EEA + E+L+
Sbjct: 509 ILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELR 552
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 20/199 (10%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAE-----AVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
+ D Y LL+ G +KA AV RE +K + ++ I L + G
Sbjct: 37 LSGSDDYVFLLRELGNRGDCKKAICCFEFAVKRERKK---NEQGKLASAMISTLGRLGKV 93
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ A +F+ + + ++ +I+ YG++ A+K+F M+ + KPN+ TY A+
Sbjct: 94 EMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAV 153
Query: 266 VNAFAREGL-CEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYRLIS--RMHMG 313
++A + G+ + EIF+++ G++PD +N+L+ EA R +S ++ G
Sbjct: 154 IDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRG 213
Query: 314 CEPDRASYNIMVDAYGRAG 332
+ D +YN ++DA + G
Sbjct: 214 IDQDIFTYNTLLDAVCKGG 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI+ G+ K MA +F + + ++A+++A+ R G C EA +IF ++ G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 290 IEPDVYAYNALMEA--------YRLI----SRMHMGCEPDRASYNIMVDAYGRAGLHEGK 337
++P++ YNA+++A R++ + G +PDR ++N ++ + GL E
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202
Query: 338 CSYS 341
S S
Sbjct: 203 RSLS 206
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 134/261 (51%), Gaps = 22/261 (8%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVL-MSCVSI--------LLIEAYGQKSLHKKAEFT 141
P H T++ LIN +L + K + +V+ M + LI+AYG +K FT
Sbjct: 224 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC-FT 282
Query: 142 YLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
L + + I ++ ++ ++KA+C +G + +A A+ +M + P+A VYNS ID +
Sbjct: 283 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 342
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ ++A + ++MK S TY L++ ++S+ A +L +R+ +P++
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-MGC----- 314
+Y +++A +G ++A E+ +++ GI P + Y+ L+ A R+H M C
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Query: 315 -----EPDRASYNIMVDAYGR 330
EP + Y IMVDAY R
Sbjct: 463 LHKNVEPSSSIYGIMVDAYVR 483
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + KAE +E+ S P+ +T+ L+ AY +G LEK V +M++ G
Sbjct: 232 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 291
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + + S + K G +AV I M P+ + Y +I+ Y ++ + A
Sbjct: 292 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 351
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L +M++ +I TY L+ R +EAEE+ L+ G+ PDV +YN ++
Sbjct: 352 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 411
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG-LHEGKCSY 340
+A L+ M+ G P +Y+ +V A AG +H+ +C Y
Sbjct: 412 CNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLY 459
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE L+ + +PT Y L+ YC L A +F +M+ + P + YN+ I
Sbjct: 174 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 233
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL K KA ++ M++ PS ET+ +I+ YG A + + ++M+ K
Sbjct: 234 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 293
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
++ ++ ++V AF + G EA I + + + P+ YN++++AY L
Sbjct: 294 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRA 331
+ +M + G +YN+++ R+
Sbjct: 354 VEKMKNSGVSASIVTYNLLLKGLCRS 379
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ P TY++L +G ++F E K G+ A + ++GL K G
Sbjct: 111 EMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 170
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++ + + P+T Y +IN Y + A +F +M+S +P+ TY
Sbjct: 171 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 230
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM- 312
AL+N + + +AE++ +++ +G++P V +N L++AY ++S M
Sbjct: 231 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 290
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G + D S+ +V A+ + G
Sbjct: 291 GIKSDVISFGSVVKAFCKNG 310
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 104/278 (37%), Gaps = 82/278 (29%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ SG A VF EM G+ P+ + YN+ IDG +KGG+ + +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M D +P+ TY ++++ +A + L +EM SH P+ TY+ L + R
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 272 ------------------------------EGLCEE-----AEEIFEQLQGAGIEPDVYA 296
GLC++ AE++ E L G+ P
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 297 YNALMEAY------------------RLISRMHM-------------------------- 312
YN L+ Y R I H+
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 313 --GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
G +P ++N ++DAYG AG E KC L ++ K
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLE-KCFTVLSDMQQK 290
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 20/236 (8%)
Query: 50 YGS-GFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF---DSLPPTHATWDDLINVSVQ 105
YG+ G ++ F VLS Q+ ++ + ++ AF +P A DD+I
Sbjct: 271 YGTAGQLEKCFTVLSDMQQKGIK--SDVISFGSVVKAFCKNGKIPEAVAILDDMI----- 323
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+ + + V +I+AY + ++A ++ +S + TY LLLK C
Sbjct: 324 ------YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 377
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
S +++AE + +R GL P V YN+ I G+ KA+E+ Q M + +P+
Sbjct: 378 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 437
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
TY +++ A + L+ +M +P+ Y +V+A+ R CE ++
Sbjct: 438 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR---CENDSKV 490
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
PP A YN I GL + G A+++F M P+ TY MI+ + K +
Sbjct: 13 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
L ++M KPNI TY L++ R G +E + +++ + PD + Y+ L +
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132
Query: 306 LI--SRMHMGCEPDRASYNIMVDAYGRAGLHEGKC 338
SR + + +M+ AY + L G C
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLC 167
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ + S +AE L + P +Y ++ A C G +KA + +EM KY
Sbjct: 371 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 430
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ Y++ + L G ++Q+M +PS+ Y +M++ Y +
Sbjct: 431 GIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKV 490
Query: 244 LKLFNEM 250
L EM
Sbjct: 491 ASLKKEM 497
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E++ IP TY+ ++ C + ++ A +F EM+ + P Y
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G Q+A + F M RD C P+ TYT +I+ Y KA K A +LF M S C
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV----------------YAYNA 299
PN+ TYTAL++ + G E+A +I+ +++G PDV + Y A
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ EA L+ M + GCEP+ Y+ ++D + + G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E++ C P TY L+ AY + + A +F M
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE----------------TY 227
G P+ V Y + IDG K G +KA +I+ RM+ + P + TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A L + M C+PN Y AL++ F + G +EA+ +F ++
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P+VY Y++L+ E
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AYRL+S M GC P+ +Y M+D +G+AG
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ +C G L++A+ VF +M + G P+ Y+S ID L K A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ RM + C P+ YT MI+ K K+ A +L + M C PN+ TYTA+++ F
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDR- 318
+ G ++ E+ Q+ G P+ Y L+ +A++L+ M P
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846
Query: 319 ASYNIMVDAYGR 330
A Y +++ + R
Sbjct: 847 AGYRKVIEGFNR 858
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+LD+ + + + L + C +G EKA ++ REM G P Y+ I
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L A +F+ MK + P TYT++I+ + K A K F+EM C P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A E+FE + G P+V Y AL++ + ++ C+
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 52/246 (21%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG------ 198
++ C P+ + L+ AYC SG A + ++M G P VVYN I G
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 199 -----------------------------------LLKGGNPQKAVEIFQRMKRDCCQPS 223
L G +KA I + M P
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
T TY+ +I L ASK A LF EM+S+ P++ TYT L+++F + GL ++A + F+
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 284 QLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
++ G P+V Y AL+ AY +M GC P+ +Y ++D + ++G
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599
Query: 333 LHEGKC 338
E C
Sbjct: 600 QIEKAC 605
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + +++A + M G P+ +VY++ IDG K G +A +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M P+ TY+ +I+ K + +ALK+ + M + C PN+ YT +++ +
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
G +EA + ++ G P+V Y A+++ + L+ +M GC P+ +
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 321 YNIMVDAYGRAGL 333
Y ++++ AGL
Sbjct: 814 YRVLINHCCAAGL 826
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +A+ + ++ + P TY+ L+ L+ A V M +
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ ++Y IDGL K G +A + M+ C P+ TYT MI+ +GKA K L
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +M + C PN TY L+N GL ++A ++ ++++ + Y ++E +
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856
Query: 305 RLISRMHMG---------CEPDRASYNIMVDAYGRAG 332
+ +G P +Y I++D++ +AG
Sbjct: 857 NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY L++ + + L+ A V REM G ++ L K G ++A+ +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ + + T YT MI+ +AS A+ + MRS C PN+ TY L+ R
Sbjct: 290 IEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
+ + I + G P +N+L+ AY+L+ +M GC+P
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
YNI++ G G +E S ++EL+ K Y
Sbjct: 407 YNILIG--GICG-NEKLPSLDVLELAEKAY 433
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L++ C +GL A ++ G PS + YN+ + L+ A + + M
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
T ++L KA + AL L + + K + YT +++ L EEA
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDA 327
+ +++ + P+V Y L+ R++S M GC P R +N ++ A
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378
Query: 328 YGRAG 332
Y R+G
Sbjct: 379 YCRSG 383
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 52/229 (22%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ C + L E+A MR P+ V Y + G L+ + I M
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL----------- 265
+ C PS + +I+ Y ++ A KL +M C+P Y L
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421
Query: 266 --------------------------VNAFAR----EGLCEEAEEIFEQLQGAGIEPDVY 295
V+ AR G E+A I ++ G PD
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481
Query: 296 AYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
Y+ ++ A+ L M PD +Y I++D++ + GL
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ RC PT TY ++ AY + L +A VF EM + G P V Y + ID K G
Sbjct: 389 EMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAG 448
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A++++ RM+ P T TY+ M+N GK + A KLF EM + C PN+ TY
Sbjct: 449 YLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYN 508
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
++ A+ + +++ +Q AG PD Y+ +M EA + M
Sbjct: 509 IIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRD 568
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 569 WAPDEPVYGLLVDLWGKAG 587
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 49/258 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AYG+ + ++A + E+ ++ P TY L+ + +G LE A ++ M++ G
Sbjct: 405 IIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVG 464
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y++ ++ L KGG A ++F M + C P+ TY ++I L KA +
Sbjct: 465 LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVV 524
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ------------------ 286
KL+ +M+ +P+ TY+ ++ G +EAE +F +++
Sbjct: 525 KLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWG 584
Query: 287 ----------------GAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRA 319
G++P+V N+L+ A+ I+R G P
Sbjct: 585 KAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQ 644
Query: 320 SYNIMV----DAYGRAGL 333
+Y +++ DA+ + GL
Sbjct: 645 TYTLLLSCCTDAHAQMGL 662
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M RD C+P+ TY +I+ YG+A+ A+K+F EM +P+ TY L++ A
Sbjct: 386 LLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHA 445
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRA 319
+ G E A +++ ++Q G+ PD + Y+A++ AY+L M GC P+
Sbjct: 446 KAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLV 505
Query: 320 SYNIMVDAYGRA 331
+YNI++ +A
Sbjct: 506 TYNIIIALQAKA 517
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ F +KR QP TYT MI + G+A + + L +EM +CKP + TY
Sbjct: 347 ALGFFHWLKR---QPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYN 403
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
+++A+ R EA ++FE+++ AG EPD Y L++ A L RM +
Sbjct: 404 RIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEV 463
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y+ MV+ G+ G
Sbjct: 464 GLSPDTFTYSAMVNCLGKGG 483
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 166 MSGLLEKAEA------VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
M G+L +A + EM + P+ V YN I + ++AV++F+ M+
Sbjct: 370 MIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAG 429
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P TY +I+++ KA +A+ L+ M+ P+ TY+A+VN + G A
Sbjct: 430 YEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAY 489
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAY 328
++F ++ G P++ YN ++ +L M + G PD+ +Y+I+++
Sbjct: 490 KLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVL 549
Query: 329 GRAG 332
G G
Sbjct: 550 GHCG 553
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY+++++ G L++AEAVF EMR+ P VY +D K GN KA+
Sbjct: 537 PDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLVDLWGKAGNVDKALGW 595
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV----N 267
+ M +D QP+ T +++ + K ++ A + M + P++ TYT L+ +
Sbjct: 596 YHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTD 655
Query: 268 AFAREGLC 275
A A+ GLC
Sbjct: 656 AHAQMGLC 663
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G +AE ++E+ P E Y LL+ + +G ++KA + M +
Sbjct: 544 IVMEVLGHCGHLDEAEAVFIEMRRDWA-PDEPVYGLLVDLWGKAGNVDKALGWYHAMLQD 602
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ NS + LK Q A + Q M PS +TYTL+++
Sbjct: 603 GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLS 651
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E++ + C P E T+A ++A+C +GLL++A + +M KYG P V+Y++
Sbjct: 236 EEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTL 295
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G + G A+++ M C+P+T Y + A + +L EM C
Sbjct: 296 VNGFSEHGRVDDALKLLSTM---LCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDC 352
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T++ L+N+ + L E A E+ EQ+Q G PDV +YN ++ +A +
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALK 412
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRA 331
L++ M C+PD S+N ++ RA
Sbjct: 413 LLNSML--CKPDTISFNAVLKCLCRA 436
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C E T+ +L+ + C +G ++ A +F M KY P V Y+S I+G + G
Sbjct: 448 KMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQG 507
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A ++F+ M C+ +Y + A++ A +L +M + C PN T+
Sbjct: 508 LDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFN 564
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR--------LISRMHMGCE 315
L+N+ ++GL A E++EQ+ GI PD++ YNAL+ Y L M CE
Sbjct: 565 ILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE 624
Query: 316 PDRASYNIMVDAYGRA 331
PD SYN ++ RA
Sbjct: 625 PDTISYNSILKGLCRA 640
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C+P E T+ +L+ + C GL+ +A V+ +M KYG+ P YN+ I+G + G
Sbjct: 550 DMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQG 609
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
A++ M C+P T +Y ++ +A + A KL EM C PN T+
Sbjct: 610 CLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 31/220 (14%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
+P +++C +IL+ + ++ L LE L + ++ L+ YC G L
Sbjct: 115 EPPAVITC-NILIKKLCARRRLADAERV--LEALKTSGAADAVSHNTLVAGYCRDGSLWD 171
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
AE V R G + V Y + IDG + G A+ + M P T TY ++
Sbjct: 172 AERVLEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLK 227
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
A + A +L EM + C PN T+ + AF + GL + A E+ EQ
Sbjct: 228 GLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQ-------- 279
Query: 293 DVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
M Y GC PD Y+ +V+ + G
Sbjct: 280 --------MPKY--------GCMPDVVIYSTLVNGFSEHG 303
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI + ++ L K A +L S C +Y LK CM+ + A + +M
Sbjct: 499 LINGFSEQGLDKVA----FDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTK 554
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V +N I+ L + G +A+E++++M + P TY +IN Y + A
Sbjct: 555 DCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDA 614
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LK + M C+P+ +Y +++ R ++AE++ ++ P+
Sbjct: 615 LKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPN 661
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
PP+ + N I L A + + +K + TL+ Y + + A +
Sbjct: 116 PPAVITCNILIKKLCARRRLADAERVLEALKTSGAADAVSHNTLVAG-YCRDGSLWDAER 174
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
+ R+ N+ TYTAL++ + R G +A + + + PD Y YN ++
Sbjct: 175 VLEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLC 230
Query: 302 ------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
EA L+ M C P+ ++ + A+ + GL
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGL 269
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE + E++ P TY L+ +CM L++A+ +F M
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I G K ++ +E+F+ M + +T TY +I +A MA
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
K+F +M S P+I TY+ L++ + G E+A +FE LQ + +EP++Y YN ++E
Sbjct: 452 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM 511
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +P+ Y M+ + R GL E
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 20/215 (9%)
Query: 134 LHKKAE--FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
LH KA ++ + +R C P TY ++ C G ++ A ++ ++M K + + V
Sbjct: 198 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVV 257
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLF 247
+YN+ IDGL K + A ++F +M+ +P TY +I+ YG+ S A +L
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSD---ASRLL 314
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI 307
++M K PN+ T+ +L++AFA+EG EAE++F+++ I+P++ YN+L+ + +
Sbjct: 315 SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 374
Query: 308 SRMHMG-----------CEPDRASYNIMVDAYGRA 331
R+ C PD +YN ++ + +A
Sbjct: 375 DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 25/278 (8%)
Query: 88 SLPPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSIL--------LIEAYGQKSLHKKA 138
S+ P T++ LIN + RL++ LM L LI+ + + ++
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ E+ + TY L++ +G + A+ +F++M G+PP + Y+ +DG
Sbjct: 416 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 475
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K G +KA+ +F+ +++ +P+ TY +MI KA K LF + KPN
Sbjct: 476 LCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLIS 308
+ YT +++ F R+GL EEA+ +F +++ G PD YN L+ A LI
Sbjct: 536 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIK 595
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
M G D ++ +++++ LH+G+ S +E+
Sbjct: 596 EMRSCGFVGDASTISMVINM-----LHDGRLEKSYLEM 628
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ + P T+ L+ A+ G L +AE +F EM + + P+ V YNS I+G
Sbjct: 316 DMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 375
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A +IF M C P TY +I + KA + ++LF EM N TY
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 435
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRM 310
L+ + G C+ A++IF+++ G+ PD+ Y+ L++ + + +
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHEGK----CSYSL 342
M EP+ +YNIM++ +AG E CS SL
Sbjct: 496 KM--EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC + +A A+ +M + G P V +N+ I GL +AV +
Sbjct: 149 PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVAL 208
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM CQP TY ++N K +AL L +M K + N+ Y +++ +
Sbjct: 209 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCK 268
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A ++F +++ GI+PDV+ YN+L+ +A RL+S M P+ +
Sbjct: 269 YKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 321 YNIMVDAYGRAG 332
+N ++DA+ + G
Sbjct: 329 FNSLIDAFAKEG 340
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 135 HKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
H F ++++ I P TY L+ C G A + +M + + P+ V +N
Sbjct: 271 HMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFN 330
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S ID K G +A ++F M + P+ TY +IN + + A ++F M S
Sbjct: 331 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 390
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------A 303
C P++ TY L+ F + EE E+F ++ G+ + YN L++ A
Sbjct: 391 DCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 450
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ +M G PD +Y+I++D + G
Sbjct: 451 QKIFKKMVSDGVPPDIITYSILLDGLCKYG 480
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A A+F EM K PS + ++ + + K + + ++M+ + TY++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
++N + + S+ +AL + +M +P+I T ++L+N + EA + +Q+ G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+PD +N L+ EA LI RM GC+PD +Y +V+ + G
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 235
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ SR P+ ++ LL A + ++ +M+ G+P + Y+ ++ +
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRS 130
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P T + ++N Y + A+ L ++M KP+ T+
Sbjct: 131 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFN 190
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +++ G +PD++ Y ++ A L+ +M G
Sbjct: 191 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 250
Query: 314 -CEPDRASYNIMVDA 327
E + YN ++D
Sbjct: 251 KIEANVVIYNTIIDG 265
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 66/341 (19%)
Query: 51 GSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSL--------PPTHATWDDLIN- 101
G+G + P LS RF + + NT+ DA S PP+ + ++
Sbjct: 27 GTGMLSIPSPFLSLLHN---RFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTS 83
Query: 102 ------VSVQLRLNKKWDPIVLMSCVSIL--LIEAYGQKSLHKKAEFTYLELLDSRCIPT 153
S L L++K D + V L LI ++ + A ++L C P
Sbjct: 84 ITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPD 143
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
++ L+K C+ G + +A +F +M G P V+Y + I+GL K G+ A+ + +
Sbjct: 144 TASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLR 203
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT------------ 261
M++ CQP Y +I+ K + A LF+EM + PNI T
Sbjct: 204 SMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLG 263
Query: 262 -----------------------YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
T +V+A +EG+ +A ++ + + +G+EPDV Y
Sbjct: 264 EWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYT 323
Query: 299 ALMEAYRLISRM-----------HMGCEPDRASYNIMVDAY 328
AL++ + L S M H GC P+ SYN +++ Y
Sbjct: 324 ALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGY 364
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++DS+ +P + ++ A C G++ +A V M + G+ P V Y + IDG
Sbjct: 274 EMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRS 333
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+AV++F M C P+ +Y +IN Y K + A+ LF EM K PN TY
Sbjct: 334 EMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYN 393
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
L++ G ++A +F ++ G PD+ Y L++ A L+ +
Sbjct: 394 TLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGS 453
Query: 313 GCEPDRASYNIMVDAYGRAG 332
+PD Y I++D RAG
Sbjct: 454 NLDPDIQIYTIVIDGMCRAG 473
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +S +A + ++ C P +Y L+ YC ++KA +F EM +
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ-PSTETYTLMINLYGKASKSFMA 243
L P+ V YN+ I GL G Q A+ +F+ M C Q P TY ++++ K A
Sbjct: 385 LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVA-CGQIPDLVTYRILLDYLCKNCHLDKA 443
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L + P+I YT +++ R G E+A ++F L G++P+V+ YN +
Sbjct: 444 MALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHG 503
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
EA +L M C D +YN + + R
Sbjct: 504 LCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLR 541
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY +LL C + L+KA A+ + + L P +Y IDG+ + G + A +
Sbjct: 421 IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARD 480
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F + +P+ TY +M + K A KLF EM + C + CTY + F
Sbjct: 481 LFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFL 540
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
R A ++ E++ G DV L+
Sbjct: 541 RNNETSRAIQLLEEMLARGFSCDVSTTTLLV 571
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 11/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + +A + E++ P T L+ A C G + + EM
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ + +D L K G +A ++ M + +P TYT +I+ + S+ A+
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M C PN+ +Y L+N + + ++A +FE++ + P+ YN L+
Sbjct: 340 KVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGL 399
Query: 305 RLISRMH-----------MGCEPDRASYNIMVD 326
+ R+ G PD +Y I++D
Sbjct: 400 CHVGRLQDAIALFREMVACGQIPDLVTYRILLD 432
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 12/213 (5%)
Query: 132 KSLHKKAEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+ H A L ++ C P Y L+ + C +A +F EM G+ P+ V
Sbjct: 191 KTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIV 250
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
NS + L G + + M P+ + T +++ K A + + M
Sbjct: 251 TCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMM 310
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+P++ TYTAL++ +EA ++F+ + G P+V++YN L+ Y I RM
Sbjct: 311 FQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERM 370
Query: 311 HMG-------CE----PDRASYNIMVDAYGRAG 332
C P+ +YN ++ G
Sbjct: 371 DKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVG 403
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +++ C +G LE A +F + GL P+ YN GL K G +A ++
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + C TY + + + +++ A++L EM + ++ T T LV +
Sbjct: 517 FMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD 576
Query: 272 EGL----CEEAEEIFEQLQ 286
+GL + E++F L+
Sbjct: 577 DGLDQSEAHKLEDMFPHLR 595
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y K ++A F+Y E++ +P+ TY LL+ A M G + +A+ + +EMRK
Sbjct: 284 LIDGYCNKGDLERA-FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 342
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P A+ YN I+G + GN ++A ++ M +P+ TYT +I + + ++ A
Sbjct: 343 GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF ++ P++ + A+++ G E A + +++ + PD +N LM
Sbjct: 403 DDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 462
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA L+ M G +PD SYN ++ YGR G
Sbjct: 463 RCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++ ++A + ++++ +P TY L+ YC G LE+A + EM K G
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS YN + L G +A ++ + M++ P TY ++IN Y + + A
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAF 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
L NEM S +P TYT+L+ +R +EA+++FE++ G+ PDV +NA+++
Sbjct: 369 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGH 428
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A+ L+ M PD ++N ++ R G
Sbjct: 429 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 467
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + K+A + E+L PT TY L+ +++A+ +F ++
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P +++N+ IDG GN ++A + + M R P T+ ++ + K A
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L +EM+ KP+ +Y L++ + R G ++A + +++ G P + YNAL++
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYG 329
A L+ M + G PD ++Y +++ G
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 569
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 134 LHKKAEFT-YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
L K EF ++E L + P +Y ++ Y G +E A + MR G+ P + Y
Sbjct: 189 LKKAREFIGFMEGLGFK--PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
S I G+ K G ++A +F +M P+ TY +I+ Y A +EM
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P++ TY LV+A EG EA+++ ++++ GI PD YN L+ Y
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 358
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
+ G L+KA M G P+ V YN+ I G GN + A I M+ +P +
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY +I+ K + A LF++M PN TY L++ + +G E A +++
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 286 QGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
GI P V YN L+ A + RM G PD +YNI+++ Y R G
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F + + S ++ + L GK K A + M KPN+ +Y +++ +
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLEGKLKK---AREFIGFMEGLGFKPNVVSYNTIIHGY 218
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ G E A I + ++ GIEPD Y Y +L+ EA L +M +G P+
Sbjct: 219 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 278
Query: 319 ASYNIMVDAYGRAGLHEGKCSY 340
+YN ++D Y G E SY
Sbjct: 279 VTYNTLIDGYCNKGDLERAFSY 300
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y ++ A C G L++A AVF EM++ G+ P YNS I G LK +A+E+F M
Sbjct: 355 SYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHM 414
Query: 216 KRDCCQPSTETYT--LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
+ C PS YT L IN YGK+ +S A++ + M+S P++ A++++ AR G
Sbjct: 415 --NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSG 472
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
A+ +F +L+ G+ PD Y ++ EA S M GC PD + N
Sbjct: 473 RLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALN 532
Query: 323 IMVDAYGRAG 332
++D + G
Sbjct: 533 SLIDTLYKGG 542
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++L AE + E+ C P E TY L+L A S +E+ V EM + G
Sbjct: 779 LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKG 838
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN+ I GL+K ++A++++ + + P+ TY +++ KA K A
Sbjct: 839 YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAE 898
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LFNEM + CKPN Y L+N G E +IFE++ GI PD+ +Y L++
Sbjct: 899 NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTL 958
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRAG-LHEGKCSYS 341
R++ +G EPD YN+++D G++ + E C ++
Sbjct: 959 CTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFN 1007
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 41/235 (17%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + E+L+ C P Y +LL + ++G E +F +M + G+ P Y ID
Sbjct: 897 AENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLID 956
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L G + F+++ +P Y L+I+ GK+ + A+ LFNEM+ P
Sbjct: 957 TLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVP 1016
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR------------ 305
N+ TY +L+ + G EA +++E+L G +P+V+ YNAL+ Y
Sbjct: 1017 NLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY 1076
Query: 306 ------------LISRM-----------------HMGCEPDRASYNIMVDAYGRA 331
LIS + GC PD+ +YN+++DA G++
Sbjct: 1077 DCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKS 1131
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y L+ PT TY LL +G + AE +F EM +YG P+ +YN ++G
Sbjct: 866 YYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRI 925
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN + +IF++M P ++YT++I+ A + L F ++ +P++
Sbjct: 926 AGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLII 985
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
Y L++ + EEA +F +++ GI P++Y YN+L+ EA ++ +
Sbjct: 986 YNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELL 1045
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
+ G +P+ +YN ++ Y +G
Sbjct: 1046 IKGWKPNVFTYNALIRGYSVSG 1067
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 143 LELLD--SRCIPTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LEL + + C P+ + T+ L + Y SG KA + M+ G+ P N+ +
Sbjct: 408 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSS 467
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L + G A +F +K P T TYT+MI KASK+ A+ F++M C P+
Sbjct: 468 LARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPD 527
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ +L++ + G EA ++F QL+ IEP YN L+ E L+
Sbjct: 528 VLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLE 587
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGLHEGKCS----YSLVE 344
M H P+ +YN ++D + G E C+ YS+ E
Sbjct: 588 EMTHSIHPPNLITYNTVLDCLSKNG--EVNCAIGMLYSMTE 626
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 11/214 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L I YG+ KA Y + +P +L + SG L A+ VF E++
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKD 486
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P + Y I K +A+ F M C P +I+ K K
Sbjct: 487 MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNE 546
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A KLF++++ K +P TY L++ REG +E + E++ + P++ YN +++
Sbjct: 547 AWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLD 606
Query: 303 AYR-----------LISRMHMGCEPDRASYNIMV 325
L S GC PD +SYN ++
Sbjct: 607 CLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVM 640
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+A + + G L A MR+ G+ + YN I L+K G +A+E+++ M
Sbjct: 145 TFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAM 204
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D PS TY++++ +GK L L NEM + KPN+ +YT + +
Sbjct: 205 VEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARF 264
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
+EA +I +++ +G +PDV + +++ R+ + PDR +Y +
Sbjct: 265 DEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITL 324
Query: 325 VDAYGRAG 332
+D G +G
Sbjct: 325 LDKCGDSG 332
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I GQ + +A ++ DS C P T+ ++++ C +G L A+ VF +M+
Sbjct: 255 IRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQ 314
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P V Y + +D G+ Q +EI+ M D + +YT +++ + + AL
Sbjct: 315 KPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALA 374
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
+F+EM+ P +Y +L++ F + + + A E+F + G P+ Y + + Y
Sbjct: 375 VFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 434
Query: 305 ------RLISRM-HM---GCEPDRASYNIMVDAYGRAG 332
+ I R HM G PD A+ N ++ + R+G
Sbjct: 435 KSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSG 472
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y + ++ + ++A + +M G P V + I L G A ++
Sbjct: 246 PNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDV 305
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +MK +P TY +++ G + S ++++N M + NI +YTA+V+A +
Sbjct: 306 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQ 365
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
G +EA +F++++ GI P+ Y+YN+L+ + L + M+ G P+ +
Sbjct: 366 VGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYT 425
Query: 321 YNIMVDAYGRAG 332
+ + ++ YG++G
Sbjct: 426 HVLFINYYGKSG 437
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 14/220 (6%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYAL-LLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
+ + K EF E + SR I D + L++ C +A +F + + G+
Sbjct: 716 KAGVEKSIEFA--ENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKT 773
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
YNS I GL+ A ++F MKR C P TY L+++ GK+ + L++ E
Sbjct: 774 GSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAE 833
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M + TY +++ + E+A +++ L G P Y L+
Sbjct: 834 MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGK 893
Query: 302 --EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
+A L + M GC+P+ YNI+++ + AG E C
Sbjct: 894 MVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVC 933
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 45/220 (20%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + S +A + +++++ C+P D AL
Sbjct: 498 MMIKCCSKASKADEAMNFFSDMVETGCVP--DVLAL------------------------ 531
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
NS ID L KGG +A ++F ++K +P+ TY +++ G+ K
Sbjct: 532 ---------NSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEV 582
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L EM PN+ TY +++ ++ G A + + G PD+ +YN +M
Sbjct: 583 MHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYG 642
Query: 302 --------EAYRLISRMHMGCEPDRASYNIMVDAYGRAGL 333
EA+R+ +M PD A+ ++ ++ + GL
Sbjct: 643 LIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGL 682
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 34/179 (18%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +LL+ P Y LL+ S +E+A +F EM+K G+ P+ YNS I L K
Sbjct: 971 FRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGK 1030
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKSF----------------- 241
G +A ++++ + +P+ TY +I Y G ++
Sbjct: 1031 AGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALI 1090
Query: 242 ----------MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE----AEEIFEQLQ 286
+A LF EM+ C P+ TY +++A + EE EEI E L
Sbjct: 1091 SGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLN 1149
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A Y ELL P TY L++ Y +SG + A A +
Sbjct: 1024 LILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYD-----C 1078
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + + I GL+ A +F MKR C P TY L+++ GK+ + L
Sbjct: 1079 VAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEML 1138
Query: 245 KLFNEM 250
K+ E+
Sbjct: 1139 KVQEEI 1144
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E++ IP TY+ ++ C + ++ A +F EM+ + P Y
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G Q+A + F M RD C P+ TYT +I+ Y KA K A +LF M S C
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV----------------YAYNA 299
PN+ TYTAL++ + G E+A +I+ +++G PDV + Y A
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ EA L+ M + GCEP+ Y+ ++D + + G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E++ C P TY L+ AY + + A +F M
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE----------------TY 227
G P+ V Y + IDG K G +KA +I+ RM+ + P + TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A L + M C+PN Y AL++ F + G +EA+ +F ++
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P+VY Y++L+ E
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AYRL+S M GC P+ +Y M+D +G+AG
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ +C G L++A+ VF +M + G P+ Y+S ID L K A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ RM + C P+ YT MI+ K K+ A +L + M C PN+ TYTA+++ F
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDR- 318
+ G ++ E+ Q+ G P+ Y L+ +A++L+ M P
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846
Query: 319 ASYNIMVDAYGR 330
A Y +++ + R
Sbjct: 847 AGYRKVIEGFNR 858
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+LD+ + + + L + C +G EKA ++ REM G P Y+ I
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L A +F+ MK + P TYT++I+ + K A K F+EM C P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A E+FE + G P+V Y AL++ + ++ C+
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 52/246 (21%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG------ 198
++ C P+ + L+ AYC SG A + ++M G P VVYN I G
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 199 -----------------------------------LLKGGNPQKAVEIFQRMKRDCCQPS 223
L G +KA I + M P
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
T TY+ +I L ASK A LF EM+S+ P++ TYT L+++F + GL ++A + F+
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 284 QLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
++ G P+V Y AL+ AY +M GC P+ +Y ++D + ++G
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599
Query: 333 LHEGKC 338
E C
Sbjct: 600 QIEKAC 605
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + +++A + M G P+ +VY++ IDG K G +A +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M P+ TY+ +I+ K + +ALK+ + M + C PN+ YT +++ +
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
G +EA + ++ G P+V Y A+++ + L+ +M GC P+ +
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 321 YNIMVDAYGRAGL 333
Y ++++ AGL
Sbjct: 814 YRVLINHCCAAGL 826
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +A+ + ++ + P TY+ L+ L+ A V M +
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ ++Y IDGL K G +A + M+ C P+ TYT MI+ +GKA K L
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +M + C PN TY L+N GL ++A ++ ++++ + Y ++E +
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856
Query: 305 RLISRMHMG---------CEPDRASYNIMVDAYGRAG 332
+ +G P +Y I++D++ +AG
Sbjct: 857 NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY L++ + + L+ A V REM G ++ L K G ++A+ +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ + + T YT MI+ +AS A+ + MRS C PN+ TY L+ R
Sbjct: 290 IEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
+ + I + G P +N+L+ AY+L+ +M GC+P
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
YNI++ G G +E S ++EL+ K Y
Sbjct: 407 YNILIG--GICG-NEKLPSLDVLELAEKAY 433
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L++ C +GL A ++ G PS + YN+ + L+ A + + M
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
T ++L KA + AL L + + K + YT +++ L EEA
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDA 327
+ +++ + P+V Y L+ R++S M GC P R +N ++ A
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378
Query: 328 YGRAG 332
Y R+G
Sbjct: 379 YCRSG 383
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 52/229 (22%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ C + L E+A MR P+ V Y + G L+ + I M
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL----------- 265
+ C PS + +I+ Y ++ A KL +M C+P Y L
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421
Query: 266 --------------------------VNAFAR----EGLCEEAEEIFEQLQGAGIEPDVY 295
V+ AR G E+A I ++ G PD
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481
Query: 296 AYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
Y+ ++ A+ L M PD +Y I++D++ + GL
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
T W+ + V LR + P S + I LI G+ +KA +L ++D C+
Sbjct: 114 TALRWESALKVFELLREQLWYRP---NSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCV 170
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ Y LL AY SGL +KA ++ +M+ P Y+ I L+ K
Sbjct: 171 VNHEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPV 230
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASK-SFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M +P+T TY +I+ YGKA + + M L +R KC+P++ T + + AF
Sbjct: 231 LLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAF 290
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCEP 316
G E E+ +E+ Q AGIEP++ +N L+++Y + + H
Sbjct: 291 GSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTI 350
Query: 317 DRASYNIMVDAYGRAG 332
+YN+++DA+GRAG
Sbjct: 351 --VTYNVVIDAFGRAG 364
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+AYG+ + E T LE+L + +C P T L+A+ SG +E E + + +
Sbjct: 250 LIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSA 309
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ +N +D K +K + + M++ + TY ++I+ +G+A
Sbjct: 310 GIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQM 369
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF MRS + KP+ T +LV A+ R G E+ + ++ + + D+ +N L++A
Sbjct: 370 EYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDA 429
Query: 304 Y-RLISRMHM----------GCEPDRASYNIMVDAYGRAGL 333
Y RL M GC+PD+ +Y M+ AY G+
Sbjct: 430 YGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGM 470
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 39/203 (19%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ A+G + E Y + + P T+ +LL +Y + EK AV M+KY
Sbjct: 287 LRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHF 346
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS----- 240
+ V YN ID + G+ ++ +F+ M+ + +PS T ++ YG+A K+
Sbjct: 347 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGG 406
Query: 241 -----------------------------FMALKLFNEMRSHK-CKPNICTYTALVNAFA 270
F +K EM K CKP+ TY ++ A+
Sbjct: 407 VLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYK 466
Query: 271 REGLCEEAEEIFEQLQGAGIEPD 293
G+ A+E LQG PD
Sbjct: 467 IGGMTSCAKE----LQGLMRMPD 485
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+A+G+ K+ E+ + + R P+ T L++AY +G EK V R +
Sbjct: 355 VVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENS 414
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ V +N +D + G + + + MK+ C+P TY MI Y + A
Sbjct: 415 DVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCA 474
Query: 244 LKLFNEMR 251
+L MR
Sbjct: 475 KELQGLMR 482
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA TY E+LD R +P TY+ ++ A C ++KA V M K G+ P+ Y S +
Sbjct: 216 KAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLV 275
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G +A++ ++M + +P+ TY+ ++ K + A K+F M K
Sbjct: 276 HGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLK 335
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P+I TY++L++ +A EG E +F+ + + ++PD Y +N L+ EA +
Sbjct: 336 PDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLV 395
Query: 307 ISRM-HMGCEPDRASYNIMVDAY 328
S+M H G +P+ +YN +++ Y
Sbjct: 396 FSKMRHQGLKPNCVTYNTLINGY 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P +Y+ + G +KA A +REM + P+ V Y+S I L KG KA+
Sbjct: 194 CLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAM 253
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ RM ++ P+ TYT +++ + + + A+K +M S+ +PN+ TY++ ++
Sbjct: 254 EVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYL 313
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA +IF + G++PD+ Y++L+ Y + + MH +PD
Sbjct: 314 CKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDH 373
Query: 319 ASYNIMVDAYGRAG 332
+N ++ A + G
Sbjct: 374 YVFNTLIYASAKQG 387
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK--YGLPPSAVVYNSYIDGLLKGGNPQK 207
C+P ++ ++LK C ++A + M G P+ V Y++ DGLLKGG+P K
Sbjct: 157 CVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDK 216
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ M P+ TY+ +I K A+++ + M + PN TYT+LV+
Sbjct: 217 AYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVH 276
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI-SRMHMGCEP 316
F G EA + E++ G+EP+V Y++ M EA ++ S + G +P
Sbjct: 277 GFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKP 336
Query: 317 DRASYNIMVDAYGRAG 332
D +Y+ ++ Y G
Sbjct: 337 DITTYSSLLHGYAIEG 352
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ LL Y + G L + +F M + + P V+N+ I K G +A+ +
Sbjct: 336 PDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLV 395
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M+ +P+ TY +IN Y K ++ AL LF EM S+ PN TY ++ R
Sbjct: 396 FSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFR 455
Query: 272 EGLCEEAEEIFEQLQGAG 289
G A+E + Q+ +G
Sbjct: 456 TGRTGTAKEFYVQIIKSG 473
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A + KA + ++ + P TY L+ +C SG L +A +M G
Sbjct: 239 IIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNG 298
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG--------- 235
+ P+ V Y+S++D L K G +A +IF M + +P TY+ +++ Y
Sbjct: 299 VEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMH 358
Query: 236 --------------------------KASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
K K A+ +F++MR KPN TY L+N +
Sbjct: 359 GLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGY 418
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ E A +F+++ G+ P+ YN +++
Sbjct: 419 CKITRMENALALFQEMVSNGVSPNFITYNIMLQG 452
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 51/252 (20%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL-------- 199
S PT TY +L+ C +G L+ A + K G +++N + GL
Sbjct: 84 SMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDD 143
Query: 200 ------------------------LKG----GNPQKAVEIFQRMKRD--CCQPSTETYTL 229
LKG Q+A+E+ M D C P+ +Y+
Sbjct: 144 AMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYST 203
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ + K A + EM + PN+ TY++++ A + ++A E+ +++ G
Sbjct: 204 VTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNG 263
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG--LHEG 336
+ P+ + Y +L+ EA + + +M G EP+ +Y+ +D + G
Sbjct: 264 VTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEAR 323
Query: 337 KCSYSLVELSVK 348
K YS+V+ +K
Sbjct: 324 KIFYSMVKRGLK 335
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++ +A + ++ P TY L+ YC +E A A+F+EM G
Sbjct: 379 LIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNG 438
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKA----VEIFQRMKRD 218
+ P+ + YN + GL + G A V+I + K+D
Sbjct: 439 VSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSGKKD 476
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K++ K E E ++ R P TY++LL+ + + L K V+ +M G P V
Sbjct: 185 KNVRKAQEI--FEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVT 242
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y +D L K G ++AV + Q M CQP+T Y+++++ YG + A+ F +M+
Sbjct: 243 YGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQ 302
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
P++ Y ALV AF + + A + + ++G GI P+ +N ++
Sbjct: 303 KDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDD 362
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAY 328
EAYR+ RM C+PD +Y +M+ +
Sbjct: 363 EAYRVFRRMIKRCQPDSDTYTMMIKMF 389
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T+ ++++ Y + +++A F M KYG+ P+ +NS + L K N +KA EIF++
Sbjct: 137 ETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQ 196
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P +TY++++ +G+A K++++M C+P+I TY +V++ + G
Sbjct: 197 MNGR-FSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGR 255
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
EEA + + + G +P + Y+ L+ Y + R+ G PD YN
Sbjct: 256 VEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNA 315
Query: 324 MVDAY 328
+V A+
Sbjct: 316 LVTAF 320
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG + + A T+L++ +P Y L+ A+C + A V +M +
Sbjct: 280 VLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGH 339
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P++ +N ++ L+ G +A +F+RM + C QP ++TYT+MI ++ + + MA
Sbjct: 340 GITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRC-QPDSDTYTMMIKMFCENDRLEMA 398
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
LK++ MR + P++ T++ L+N +G +A + E + GI P
Sbjct: 399 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRP 447
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
++ R G + +++ + L K Q ++ M+R + ET+ +++ Y +A
Sbjct: 91 KQRRGGGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGV-VNVETFGIIMRKYARA 149
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
K A+ FN M + PN+ + +L+ A + +A+EIFEQ+ G PD Y
Sbjct: 150 QKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTY 208
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ L+E + ++ S M GC+PD +Y IMVD+ + G E
Sbjct: 209 SILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVE 257
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P DTY +++K +C + LE A V++ MR PS ++ I+GL G +A
Sbjct: 374 RCQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQA 433
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
+ + M +P T+ + L K + + L ++M+
Sbjct: 434 CVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMK 476
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 139/319 (43%), Gaps = 49/319 (15%)
Query: 43 LRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPT---------- 92
++ K W+ F+ L P +FV +D+ + + PT
Sbjct: 118 IKAKDWRERVKFLTDKILSLKPN-----QFVADILDARPV-----QMTPTDYCFVVKSVG 167
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
+W + V L L P M + ++ + Q+SL +E+ +R P
Sbjct: 168 QESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLA-------VEIF-TRAEP 219
Query: 153 TE----DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG--NPQ 206
T Y ++ Y SG KA+ + MR+ G P + +N+ I+ LK G P
Sbjct: 220 TVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
VE+ ++ +P TY +++ + S A+K+F +M +H+C+P++ TY A++
Sbjct: 280 LVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHMG 313
+ + R GL EAE +F +L+ G PD YN+L+ E Y+ + +M G
Sbjct: 340 SVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 314 CEPDRASYNIMVDAYGRAG 332
D +YN ++ YG+ G
Sbjct: 400 --KDEMTYNTIIHMYGKQG 416
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 144 ELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYID 197
ELLD+ C+P ++ L+ A SG L V +R GL P A+ YN+ +
Sbjct: 246 ELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLS 305
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ N + AV++F+ M+ CQP TY MI++YG+ + A +LF E+ P
Sbjct: 306 ACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSP 365
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----- 312
+ TY +L+ AFARE E+ +E+++Q+Q G D YN ++ Y ++ +
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 313 -------GCEPDRASYNIMVDAYGRA 331
G PD +Y +++D+ G+A
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKA 451
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P TY ++ Y GL +AE +F E+ G P AV YNS + + N +K
Sbjct: 327 RCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKV 386
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK-PNICTYTALVN 267
E++Q+M++ TY +I++YGK + +AL+L+ +M+ + P+ TYT L++
Sbjct: 387 KEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLID 446
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEP 316
+ + EA + ++ GI+P + Y+AL+ Y + + G +P
Sbjct: 447 SLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Query: 317 DRASYNIMVDAYGRA 331
D +Y++M+D R
Sbjct: 507 DNLAYSVMLDVLLRG 521
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ L +AE ++EL P TY LL A+ EK + V+++M+K G
Sbjct: 338 MISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ-PSTETYTLMINLYGKASKSFMA 243
+ YN+ I K G A+++++ MK + P TYT++I+ GKA++S A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEA 457
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L +EM KP + TY+AL+ +A+ G EEAE+ F + +G +PD AY+ +++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEAYG+ L +KAE L S P T+ L+ AY G E+A A+F M + G
Sbjct: 758 IIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDG 817
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ N + L G ++ + + ++ + S + LM++ + +A F
Sbjct: 818 PSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVN 877
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+++ M++ P I Y ++ + +AE + +++ A + ++ +N++++ Y
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGR 330
+I G EPD +YN ++ Y R
Sbjct: 938 TVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCR 974
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 144 ELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFR--EMRKYGLPPSAVVYNSYIDGLL 200
++LD+R + T Y ++K+ ++A VF +R + P + +V + I G+L
Sbjct: 145 DILDARPVQMTPTDYCFVVKSVGQESW-QRALEVFEWLNLRHWHSPNARMV--AAILGVL 201
Query: 201 KGGNPQK-AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
N + AVEIF R + + Y M+ +Y ++ K A +L + MR C P++
Sbjct: 202 GRWNQESLAVEIFTRAE-PTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDL 260
Query: 260 CTYTALVNAFAREGLCEE--AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---- 313
++ L+NA + G E+ + ++ +G+ PD YN L+ A S +
Sbjct: 261 ISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVF 320
Query: 314 -------CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
C+PD +YN M+ YGR GL + +EL +K +
Sbjct: 321 EDMEAHRCQPDLWTYNAMISVYGRCGL-AAEAERLFIELELKGF 363
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 109/255 (42%), Gaps = 46/255 (18%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L+++A+ + + Y + + +PT Y ++++ C + AE + EM +
Sbjct: 861 LLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
++NS + + +K V+++QR+K +P TY +I +Y + +
Sbjct: 921 ANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEE 980
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL----------------- 285
L +MR+ P + TY +L++AF ++ E+AE++FE+L
Sbjct: 981 GYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK 1040
Query: 286 ------------------QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
+ AGIEP + + LM EA +++S + + E
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVEL 1100
Query: 317 DRASYNIMVDAYGRA 331
Y+ ++DAY R+
Sbjct: 1101 TTLPYSSVIDAYLRS 1115
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 24/238 (10%)
Query: 101 NVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALL 160
N V+L + W+ ++ M V IE Y KK Y + +S P E TY L
Sbjct: 922 NFKVELAI---WNSMLKMYTV----IEDY------KKTVQVYQRIKESGLEPDETTYNTL 968
Query: 161 LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
+ YC E+ ++ ++MR GL P Y S I K ++A ++F+ +
Sbjct: 969 IIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+ Y M+ + + A KL M++ +P + T L+ +++ G +EAE+
Sbjct: 1029 KLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEK 1088
Query: 281 IFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDA 327
+ L+ +E Y+++++AY RL+ G EPD + V A
Sbjct: 1089 VLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C Y LL + +A VF E+R G PS V S + K G P+ A
Sbjct: 677 CFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAY 736
Query: 210 EIFQRMKRD----CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++ + + C P YT +I YGK A + +R P++ T+ +L
Sbjct: 737 QVVNQAETKGFHFACSP---MYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSL 793
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGC 314
++A+A G E A IF + G P V + N L+ A + R+ MG
Sbjct: 794 MSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGF 853
Query: 315 EPDRASYNIMVDAYGRAG 332
+ ++S +M+DA+ RAG
Sbjct: 854 KISKSSILLMLDAFARAG 871
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ + +A E+LD PT TY+ L+ Y +G E+AE F M +
Sbjct: 443 VLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + Y+ +D LL+G +KA +++ M D PS Y LMI K ++S
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDV 562
Query: 244 LKLFNEM 250
K +M
Sbjct: 563 QKTIRDM 569
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + +++A + ++ PT ++ LL A C+ G LE+ V E++ G
Sbjct: 793 LMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMG 852
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
S +D + GN + +I+ MK P+ Y +MI L K + A
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 245 KLFNEMRSHKCK-----------------------------------PNICTYTALVNAF 269
+ +EM K P+ TY L+ +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMY 972
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
R+ EE + +Q++ G++P + Y +L+ A+
Sbjct: 973 CRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAF 1007
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY- 183
L+ A+ ++ +K + Y ++ E TY ++ Y G L+ A ++++M+
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P A+ Y ID L K +A + M +P+ +TY+ +I Y KA K A
Sbjct: 433 GRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
F+ M KP+ Y+ +++ R +A ++ + G P Y ++
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMI 550
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G++ ++AE + ELL Y ++K SG KAE + + M+ G
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + GNPQ+A ++ +K + +T Y+ +I+ Y ++ +
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGI 1122
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ EM+ +P+ +T V A + E + + LQ G +
Sbjct: 1123 ERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDIGFD 1169
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY++L+ +C + +EKA + EM + G PP Y S ID L K A E+
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 463
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ +K +C S+ Y +MI GKA + A+ +F+EM C P++ Y AL++ AR
Sbjct: 464 FQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G+ +EA ++Q G PD+ +YN ++
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNIIL 553
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ D+ PT Y +L+ + + A ++F EMR P Y I GL K G
Sbjct: 255 EMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 314
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A F M+R+ C+P T MIN GKA + A+KLF EM + +C P++ TY
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYN 374
Query: 264 ALVNA-FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM---------- 312
++ A F + E FE+++ +GI P + Y+ L++ + +RM
Sbjct: 375 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 434
Query: 313 -GCEPDRASYNIMVDAYGRAGLHEGKC 338
G P A+Y ++DA G+A ++ C
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLAC 461
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 17/227 (7%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS-GLLE 171
D IV+ + ++ L G+ A + E+ RCIP+ TY ++KA S
Sbjct: 334 DTIVMNNMINFL-----GKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRAS 388
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+ + F M++ G+ PS+ Y+ IDG K +KA+ + + M P Y +I
Sbjct: 389 EVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLI 448
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ GKA + +A +LF E++ + + Y ++ + G ++A +F+++ G
Sbjct: 449 DALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCA 508
Query: 292 PDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDA 327
PDVYAYNALM EA + RM GC PD SYNI+++
Sbjct: 509 PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG 555
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 36/290 (12%)
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL------RLNKKWDPIVL 117
P A++ L + VD + + + D +NV +Q R N + D
Sbjct: 75 PDAEKALEVLMLRVDHWLVREIMKT--------DIGVNVKMQFFRWAAKRRNYEHDTSTY 126
Query: 118 MSCVSIL-LIEAYGQ--KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
M+ + L ++E YG+ K + + + C+ T + +++ + ++ KA
Sbjct: 127 MALIHCLEVVEQYGEMWKMIQEMVR-------NPICVVTPTELSEVVRMLGNAKMVSKAI 179
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINL 233
A+F +++ P+A YNS I L+ G +K E++ M + C P T TY+ +I+
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISA 239
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ K + A++L NEM+ + +P YT LV F + A +FE+++ PD
Sbjct: 240 FCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPD 299
Query: 294 VYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
V+ Y L+ EAY M GC PD N M++ G+AG
Sbjct: 300 VFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAG 349
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 144 ELLDS---RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
E+ DS R +P TY++LL+ + L KA +FREM G P V Y +D L
Sbjct: 146 EIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLC 205
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G +A+ I M C+P+ Y+++++ YG ++ A+ F EM ++ +P++
Sbjct: 206 KAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVA 265
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
Y AL+ AF + + + ++ G+ P+ +N ++ EAYR+ RM
Sbjct: 266 VYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRM 325
Query: 311 HMGCEPDRASYNIMVDAY 328
CEPD +Y +M+ +
Sbjct: 326 IKVCEPDADTYTMMIKMF 343
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
++++ S+ + +T+ ++++ Y + +E+A F M KY +PP+ +N + L K
Sbjct: 79 VKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKS 138
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
N +KA EIF +K D P ++TY++++ +GK A ++F EM S+ C+P+I TY
Sbjct: 139 KNVRKAQEIFDSIK-DRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTY 197
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------H 311
+V+ + G +EA I ++ +P + Y+ L+ Y + +R+ +
Sbjct: 198 GIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMEN 257
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
G EPD A YN ++ A+ +A
Sbjct: 258 NGIEPDVAVYNALIGAFCKAN 278
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG ++ + A T+LE+ ++ P Y L+ A+C + L+ V EM
Sbjct: 234 VLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCK 293
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P++ +N + L+ G +A +F RM + C+P +TYT+MI ++ + + A
Sbjct: 294 GVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIK-VCEPDADTYTMMIKMFCERDELKKA 352
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
LK++ M+ + P++ T+ L+N +G +A + E++ GI P + L
Sbjct: 353 LKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRL 409
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
S +++ ID L K Q ++ + MK + ET+ +++ Y +A K A+ F
Sbjct: 55 SVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKR-MVNVETFCIIMRKYARAQKVEEAVYTF 113
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
N M + PN+ + L++A + +A+EIF+ ++ + PD Y+ L+E +
Sbjct: 114 NIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFV-PDSKTYSILLEGWGKD 172
Query: 305 ------RLISR--MHMGCEPDRASYNIMVDAYGRAG 332
R I R + GC PD +Y IMVD +AG
Sbjct: 173 PNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAG 208
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 12/235 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ + +LE+ S P TY +L++ + G ++ +F +M +
Sbjct: 350 VLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEE 409
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ Y I KGG + A +I M PS++ YT +I +G+A+ A
Sbjct: 410 NVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEA 469
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +FN M P + TY +L++AFAR GL +EAE I ++ +G++ DV+++N ++EA
Sbjct: 470 LVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEA 529
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRAGL-HEGKCSYSLVELS 346
+R + CEP+ + ++ Y AGL EG+ + ++ S
Sbjct: 530 FRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKAS 584
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E + +++ GLL+K VF EM G+ + Y + I+ + G ++
Sbjct: 130 CKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASL 189
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
E+ MK++ PS TY +IN + + L LF EMR +P++ TY L+ A
Sbjct: 190 ELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGA 249
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PD 317
A GL +EAE +F + +GI PD+ Y+ L++ + ++R+ E PD
Sbjct: 250 CAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPD 309
Query: 318 RASYNIMVDAYGRAG 332
SYN++++AY G
Sbjct: 310 ITSYNVLLEAYAELG 324
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 123/251 (49%), Gaps = 15/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+ + ++R ++ P V+ L+ A + L +AE + + +S +P +
Sbjct: 221 WEGLLGLFAEMR-HEGIQPDVITYNT---LLGACAHRGLGDEAEMVFRTMNESGIVPDIN 276
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L++ + LEK + REM G P YN ++ + G+ ++A+ +F++M
Sbjct: 277 TYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQM 336
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C + TY++++NLYGK + LF EM+ P+ TY L+ F G
Sbjct: 337 QAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYF 396
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+E +F + +EP++ Y L+ +A +++ M+ G P +Y +
Sbjct: 397 KEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGV 456
Query: 325 VDAYGRAGLHE 335
++A+G+A L+E
Sbjct: 457 IEAFGQAALYE 467
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EAY + K+A + ++ + C+ TY++LL Y G + +F EM+
Sbjct: 315 VLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVS 374
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P A YN I +GG ++ V +F M + +P+ +TY +I GK A
Sbjct: 375 NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDA 434
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ M P+ YT ++ AF + L EEA +F + G P V YN+L+ A
Sbjct: 435 KKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHA 494
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
+ ++SRM+ G + D S+N +++A+ + G +E
Sbjct: 495 FARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYE 537
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ L++ A+ L + + +P+ Y +++A+ + L E+A +F M + G
Sbjct: 421 LIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVG 480
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS I +GG ++A I RM + ++ +I + + + A+
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAV 540
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
K + EM C+PN T A+++ + GL +E EE F++++ +GI P V Y
Sbjct: 541 KSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALY 600
Query: 298 ---NALMEAYRLISRM 310
+ L +AY LI M
Sbjct: 601 AKNDRLNDAYNLIDAM 616
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I G++ L K + E+ + + T +Y ++ AY +G + + M
Sbjct: 136 IHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGM 195
Query: 181 RKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
++ + PS + YN+ I+ +GG + + + +F M+ + QP TY ++
Sbjct: 196 KQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGL 255
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +F M P+I TY+ LV F + E+ E+ +++ G PD+ +YN
Sbjct: 256 GDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNV 315
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
L+EAY + + GC + A+Y+++++ YG+ G ++
Sbjct: 316 LLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYD 362
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
+ +AL+ K + G +++ +F+ M R+ P+ ++ I L + G K E+F
Sbjct: 99 NDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFD 158
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M + + +YT +IN YG+ + +L+L N M+ + P+I TY ++NA AR G
Sbjct: 159 EMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGG 218
Query: 274 L-CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASY 321
L E +F +++ GI+PDV YN L+ EA + M+ G PD +Y
Sbjct: 219 LDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTY 278
Query: 322 NIMVDAYGR 330
+ +V +G+
Sbjct: 279 SYLVQTFGK 287
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEA+GQ +L+++A + + + PT +TY L+ A+ GL ++AEA+ M + G
Sbjct: 456 VIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESG 515
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L +N I+ +GG ++AV+ + M++ C+P+ T ++++Y A
Sbjct: 516 LKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGE 575
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA-------------------------- 278
+ F E+++ P++ Y ++ +A+ +A
Sbjct: 576 EQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGD 635
Query: 279 ----------EEIFEQLQGAGIEPDVYAYNALMEA 303
E +F++L G + YNAL+EA
Sbjct: 636 FDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEA 670
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ C G A +F++M + G P V Y++ ID L K +A++I
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK P+ TY +I S+ A + NEM S PNI T++ L+N F +
Sbjct: 68 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG EA + + + G+EP+V Y++LM Y L + + GC+PD S
Sbjct: 128 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFS 187
Query: 321 YNIMVDAYGRA 331
YNI+++ Y +A
Sbjct: 188 YNILINGYCKA 198
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++ C P TY+ ++ + C + +A +F M+ G+ P+ YNS I GL +
Sbjct: 38 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 97
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + M P+ T++L+IN++ K F A + M +PN+ TY++L+
Sbjct: 98 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 157
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
N ++ + EA ++F+ + G +PDV++YN L+ EA +L + M H G
Sbjct: 158 NGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 217
Query: 316 PDRASYNIMVDAYGRAG 332
PD SYN ++D + G
Sbjct: 218 PDIVSYNTLIDGLCQLG 234
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 12/229 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ S ++A E++ +P T++LL+ +C G + +A V + M + G
Sbjct: 86 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 145
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y+S ++G +A ++F M C+P +Y ++IN Y KA + A
Sbjct: 146 VEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 205
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+LFNEM P+I +Y L++ + G EA ++F+ + G PD+ Y+ L++
Sbjct: 206 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 265
Query: 303 --------AYRLISRMHMG-CEPDRASYNIMVDAYGRA-GLHEGKCSYS 341
A+RL M +P+ YNI++DA ++ L E + +S
Sbjct: 266 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFS 314
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L++ C +A A+ EM + P+ V ++ I+ K GN +A +
Sbjct: 78 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 137
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P+ TY+ ++N Y ++ F A KLF+ M + CKP++ +Y L+N + +
Sbjct: 138 LKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCK 197
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
EA+++F ++ G+ PD+ +YN L+ EA+ L M G PD +
Sbjct: 198 AKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCT 257
Query: 321 YNIMVDAYGRAG 332
Y+I++D + + G
Sbjct: 258 YSILLDGFCKQG 269
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 114/217 (52%), Gaps = 10/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y ++ +A + ++ C P +Y +L+ YC + + +A+ +F EM G
Sbjct: 156 LMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 215
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V YN+ IDGL + G ++A ++F+ M + P TY+++++ + K A
Sbjct: 216 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 275
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF M+S KPN+ Y L++A + +EA ++F +L G++P++ + L E +
Sbjct: 276 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWK-LFEIW 334
Query: 305 RLISRMHMGCEPDRASYNIMVDA--YGRAGLHEGKCS 339
+ ++ + M ++ IM+ + + +++G+C+
Sbjct: 335 KRMAALRM-------NFLIMLSSEDFFSTRMNQGQCN 364
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + +A+ + E++ P +Y L+ C G L +A +F+ M
Sbjct: 190 ILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ +DG K G KA +F+ M+ +P+ Y ++I+ K+ A
Sbjct: 250 GNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 309
Query: 244 LKLFNEMRSHKCKPNI 259
KLF+E+ +PN+
Sbjct: 310 RKLFSELFVQGLQPNM 325
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + K+A + +++ P TY L C +G ++ A + EM + G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YN+ ++GL K GN ++ V++ + M P T TYT +++ Y K + A
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L M + + +P + T+ L+N F G+ E+ E + E + GI P+ +N+LM+ Y
Sbjct: 543 ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY 602
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRA 331
+ MH G PD +YNI++ + +A
Sbjct: 603 CIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKA 640
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ +C G + A +F EMR+ + P V Y S I G+ K G +A E+
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M +P TYT +I+ Y KA + A + N+M PN+ TYTAL + +
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G + A E+ ++ G++P+VY YN ++ + +L+ M + G PD +
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524
Query: 321 YNIMVDAYGRAG 332
Y ++DAY + G
Sbjct: 525 YTTLMDAYCKMG 536
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY ++ C SG + +A +F EM GL P V Y + IDG K G
Sbjct: 372 EMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAG 431
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A + +M + P+ TYT + + K + +A +L +EM +PN+ TY
Sbjct: 432 EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYN 491
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------- 315
+VN + G E+ ++ E++ AG PD Y LM+AY + M E
Sbjct: 492 TIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK 551
Query: 316 ---PDRASYNIMVDAYGRAGLHE 335
P ++N++++ + +G+ E
Sbjct: 552 RLQPTLVTFNVLMNGFCMSGMLE 574
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L P E TY L+ YC +G +++A +V +M + GL P+ V Y + DGL K G
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A E+ M R QP+ TY ++N K +KL EM P+ TYT
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
L++A+ + G +A E+ + ++P + +N LM + RLI M
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586
Query: 313 GCEPDRASYNIMVDAY 328
G P+ ++N ++ Y
Sbjct: 587 GIMPNATTFNSLMKQY 602
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A +++ D P +Y +++ YC G L+K + E++ GL P +YN+
Sbjct: 259 REAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNI 318
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I L K G +A ++ + M++ P YT +I+ + K A KLF+EMR K
Sbjct: 319 ILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI 378
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+I TYT++++ + G EA E+F ++ G+EPD Y AL+ EA+
Sbjct: 379 VPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFS 438
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ ++M G P+ +Y + D + G
Sbjct: 439 VHNQMVQKGLTPNVVTYTALADGLCKNG 466
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + KA +L+ R PT T+ +L+ +CMSG+LE E + M + G
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A +NS + N + EI++ M P + TY ++I + KA A
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI--EPDVY 295
L EM TY AL+ F + EA ++FE+++ G+ E D+Y
Sbjct: 648 FLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIY 700
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
++L C G + +A + +M G P V Y + G + G K +++ +K
Sbjct: 247 IVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGK 306
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+P Y +I L K + A +L MR P+ YT +++ F + G A
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 279 EEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRMHM-GCEPDRASYNIMVDA 327
++F++++ I PD+ Y + ++EA + + M + G EPD +Y ++D
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 328 YGRAGLHEGKCSYSL 342
Y +AG E K ++S+
Sbjct: 427 YCKAG--EMKEAFSV 439
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 89/215 (41%), Gaps = 20/215 (9%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLL-KAYCMSGLLEKAEAVFREMRKYGLPPS 188
QK HK LL + + D+ L L + C ++ A VF E + G+ +
Sbjct: 190 AQKLFHK--------LLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWN 241
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V N + L + G ++A + +M P +Y ++++ Y + + LKL +
Sbjct: 242 TVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVD 301
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
E++ KP+ Y ++ + G EAE++ ++ G+ PD Y ++ + +
Sbjct: 302 ELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361
Query: 309 RMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ C+ PD +Y ++ ++G
Sbjct: 362 NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSG 396
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ C P TY L+ AY + L +A +F +M++ G P V Y + +D K G
Sbjct: 92 EMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAG 151
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++Q+M++ QP T TY+++I+ GKA K ALKLF EM P++ TY
Sbjct: 152 FHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYN 211
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HM 312
+++ A+ G A +++ +Q AG PD Y+ +ME I +
Sbjct: 212 IIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQA 271
Query: 313 GCEPDRASYNIMVDAYGRA 331
G PD Y +MVD +G+A
Sbjct: 272 GWVPDAPIYGVMVDMWGKA 290
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G Y + I + + N + + Q M+R+ C+P TY +I+ YG+A+ A
Sbjct: 62 GYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEA 121
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+++F +M+ C P+ TY LV+ ++ G + A ++++++Q AG +PD + Y+ ++
Sbjct: 122 MRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHC 181
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA +L M G P +YNI++D ++G
Sbjct: 182 LGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSG 221
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + H A Y ++ + P TY++++ +G + +A +F EM + G
Sbjct: 143 LVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERG 202
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YN ID K GN A++++ M+ P TY++M+ + G+ A
Sbjct: 203 FAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAE 262
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+FNEM P+ Y +V+ + + E A E ++++ +G+ P+V N+L+ +Y
Sbjct: 263 LMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSY 322
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K D C TYT MI + G+A +L EMR C+P + TY L++A+ R
Sbjct: 64 KHDVC-----TYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFL 118
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
EA IF Q+Q G C PDR +Y +VD + +AG H+
Sbjct: 119 GEAMRIFYQMQEEG------------------------CSPDRVTYCTLVDLHSKAGFHD 154
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ +A + E+++ P+ TY +++ SG A ++ +M+
Sbjct: 177 VIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDA 236
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L + G+ Q+A +F M++ P Y +M++++GKA + A
Sbjct: 237 GFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERA 296
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ + +M PN+ +L+ ++ R + A + E ++ G+ P + + L+ +
Sbjct: 297 LEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSS 356
Query: 304 -------YRLISRMHMGCE 315
+++++ MH E
Sbjct: 357 CTASAQHHQVVNLMHRSSE 375
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY +++ +Y GL++KA +F M P V YNS I+ L K G+ +A
Sbjct: 402 IPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHM 461
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F+ M+ P TY+++I +GK++K MA LF+EM S C PNI TY L++
Sbjct: 462 LFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLE 521
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EEA +++E ++ G+ PD Y+ L
Sbjct: 522 RRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 14/258 (5%)
Query: 92 THATWDDLINVSVQL-RLNKKWDPIVLMSCVSIL--LIEAYGQKSLHKKAEFTYLELLDS 148
T++ D++ QL RLN+ D SI L+++ + +A + + +S
Sbjct: 270 TYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNS 329
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
D + +L+ C + +A + M + G+ +YN L K
Sbjct: 330 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 389
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F +MK + P TY +MI+ YG+ A +LF M + CKP++ TY +L+N
Sbjct: 390 SNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINC 449
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
+ G +EA +F+++Q G +PDV+ Y+ L+E + +++ M GC P+
Sbjct: 450 LGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 509
Query: 318 RASYNIMVDAYGRAGLHE 335
+YNI++D R G E
Sbjct: 510 IVTYNILLDCLERRGKTE 527
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 52/301 (17%)
Query: 91 PTHATWDDLINVSVQLRLNKKW----DPIVLMSCVSILL-----IEAYGQKSLHKKAEFT 141
P T+ LI +S + K+ D +V CV L+ IEA G+ + K F
Sbjct: 196 PDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFV 255
Query: 142 YLELLDSRCIPTEDTYAL--------------------------------LLKAYCMSGL 169
+++++ C P + TY++ L+K+ C SG
Sbjct: 256 LSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGH 315
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+A VF M + S ++ L +A+++ M Y +
Sbjct: 316 ASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNM 375
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ + GK + LF++M+++ P++ TY +++++ R GL ++A E+FE ++ +
Sbjct: 376 VFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS 435
Query: 290 IEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKC 338
+PDV YN+L+ EA+ L M G +PD +Y+I+++ +G++ E C
Sbjct: 436 CKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMAC 495
Query: 339 S 339
S
Sbjct: 496 S 496
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++A+ S + K V+ EMR+ G YN +D L K G +A ++F+ M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C P TYT++I + GKA ++ L F+EM S C N+ + ++ A + +
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 249
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ + ++ +P+ + Y+ ++ ++H
Sbjct: 250 DKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 285
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 47/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + +A + ++ C+P TY +L++ +G K + F EM
Sbjct: 168 MLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK 227
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---- 239
G + + +N+ I+ L K K + + +M + CQP+ TY++ +++ +
Sbjct: 228 GCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRL 287
Query: 240 --------SFMALKLFNEMRSHKCKPNICTYTALVNAFAR-----------------EGL 274
FM +++ + CK + N F R E L
Sbjct: 288 NEVLDICSRFMNRSIYSYLVKSLCKSGHASEAH--NVFCRMWNSHEKGDRDAFVSMLEVL 345
Query: 275 CE-----EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDR 318
C EA ++ + GI DV YN + A L +M G PD
Sbjct: 346 CNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDV 405
Query: 319 ASYNIMVDAYGRAGL 333
+YNIM+ +YGR GL
Sbjct: 406 FTYNIMISSYGRVGL 420
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I +YG+ L KA + + S C P TY L+ G L++A +F+EM++
Sbjct: 410 IMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEK 469
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ I+ K + A +F M + C P+ TY ++++ + K+ A
Sbjct: 470 GYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEA 529
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
KL+ M+ P+ TY+ L
Sbjct: 530 HKLYETMKQQGLIPDSITYSIL 551
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+GL S Y + L+ K ++++ M+R + Y ++++ KA
Sbjct: 121 KWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVD 180
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +M+ C P+ TYT L+ + G + F+++ G ++ A+N ++
Sbjct: 181 QAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTII 240
Query: 302 EA-----------YRLISRMHMGCEPDRASYNIMVDAYGRAG-LH 334
EA + L + C+P++ +Y+I +D G LH
Sbjct: 241 EALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 285
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A + E+ + P TY++L++ + S +E A ++F EM G
Sbjct: 446 LINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG 505
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P+ V YN +D L + G ++A ++++ MK+ P + TY+++ L ++ ++
Sbjct: 506 CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRT 561
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + TY++ + C G +E+A +F +++ G+ + V+Y + IDG K G A
Sbjct: 246 VPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANS 305
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ RM + C P++ TY +I+ K K AL L M K + TYT L+ A
Sbjct: 306 LLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML 365
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRA 319
+EG + A I +Q+ +G +PDVY Y A + A+ ++S M G PD
Sbjct: 366 KEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDAL 425
Query: 320 SYNIMVDAYGRAGL 333
+Y +++DAYG GL
Sbjct: 426 TYTLVIDAYGGLGL 439
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 160 LLKAYCMSGLLEKAE---------AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
++ YC G L +A +VF M K G + V Y + I GL + G + +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF++M+ D C P+ TYT++++ ++ + A+ LF+EMR C+PNI TYT ++NA
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDRA 319
+E EE I +++ G+ P V YNAL++ Y ++ MH C P+
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 320 SYNIMVDAYGR 330
+YN ++ + R
Sbjct: 181 TYNELICGFCR 191
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C E +Y L+ C G +++ +F++MR+ P+ Y + L + G +A+
Sbjct: 35 CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAI 94
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M+ C+P+ TYT+MIN K +K ++ +EM P++ TY AL++ +
Sbjct: 95 NLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGY 154
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG+ E A+EI + + P+ YN L+ A L+S+M P
Sbjct: 155 CKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSV 214
Query: 319 ASYNIMVDAYGRAG 332
+YN ++ + G
Sbjct: 215 VTYNSLIHGQCKIG 228
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++ A + +A + E+ + C P TY +++ A C LE+ + EM +
Sbjct: 79 VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS YN+ IDG K G + A EI M + C P+ TY +I + + A
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L ++M + P++ TY +L++ + G + A + + G+ PD + Y+ +
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L + + G + + Y ++D Y +AG
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAG 298
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ +P+ TY L+ YC G++E A+ + M P+ YN I G +
Sbjct: 134 EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKK 193
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +A+ + +M PS TY +I+ K A +L N M + P+ TY+
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM- 312
++ ++G EEA +F L+ GI+ + Y AL++ Y L+ RM
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313
Query: 313 GCEPDRASYNIMVDA 327
C P+ ++YN ++D
Sbjct: 314 DCLPNSSTYNALIDG 328
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 20/257 (7%)
Query: 89 LPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSIL--------LIEAYGQKSLHKKAE 139
L P+ T++ LI+ ++ L+ + + LM+ ++ I+ +K ++A
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEAN 269
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ L + E Y L+ YC +G ++ A ++ M P++ YN+ IDGL
Sbjct: 270 VLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K Q+A+ + + M + + + TYT++I K A ++ ++M S +P++
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISR 309
YTA ++AF G +EAE++ + G+ PD Y +++AY ++ R
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKR 449
Query: 310 M-HMGCEPDRASYNIMV 325
M GC+P +Y+ ++
Sbjct: 450 MFDTGCDPSHHTYSCLI 466
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C PT TY +++ A SG +A +F EMR+ G P+ Y I+ + K +
Sbjct: 67 EDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLE 126
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+ I M PS TY +I+ Y K A ++ + M S+ C PN TY L+
Sbjct: 127 EGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI 186
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCE 315
F R+ A + ++ + + P V YN+L+ AYRL++ M+ G
Sbjct: 187 CGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVV 246
Query: 316 PDRASYNIMVDAYGRAG 332
PD+ +Y++ +D + G
Sbjct: 247 PDQWTYSVFIDTLCKKG 263
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I A+ + K+AE + + +P TY L++ AY GLL A V + M G
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTG 454
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMA 243
PS Y+ I LLK E+ ++ K C + + K K A
Sbjct: 455 CDPSHHTYSCLIKHLLKE-------ELTKKYKNVALCDSIPNVFFADVADVWKMMKFETA 507
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+LF +M H C PNI TY L+ + G A+++F+ + G+ P YN+L+
Sbjct: 508 LELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNC 567
Query: 302 --------EAYRLI-SRMHMGCEPDRASYNIM 324
+A RL+ + M G P S N++
Sbjct: 568 CCELGIYGDAVRLVGAMMEHGHLPLLESLNVL 599
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 115/299 (38%), Gaps = 68/299 (22%)
Query: 78 DSNTIWDAF--DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLH 135
D+N++ D + P +T++ LI+ + R ++ ++LL+E+ QK L
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQE----------ALLLMESMIQKGL- 350
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+C T TY +L+ A G + A + +M G P +Y ++
Sbjct: 351 -------------KC--TVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I GN ++A ++ M P TYTL+I+ YG A + M C
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGC 455
Query: 256 KPNICTYTALVNAFARE---------GLC--------------------EEAEEIFEQLQ 286
P+ TY+ L+ +E LC E A E+FE++
Sbjct: 456 DPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKML 515
Query: 287 GAGIEPDVYAYNALMEAYRLISRM--------HM---GCEPDRASYNIMVDAYGRAGLH 334
G P++ Y L+ + R+ HM G P A YN +++ G++
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIY 574
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + A +L C+P TY L+ C +++A + M + G
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + Y I +LK G+ A I +M QP YT I+ + A
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ + M P+ TYT +++A+ GL A ++ +++ G +P + Y+ L++
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIK 467
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 86 FDS-LPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEF-TYL 143
FD+ P+H T+ LI ++ L KK+ + L C SI + + K +F T L
Sbjct: 451 FDTGCDPSHHTYSCLIKHLLKEELTKKYKNVAL--CDSIPNVFFADVADVWKMMKFETAL 508
Query: 144 EL----LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
EL L+ C P +TYA L+ C G L A+ +F M + G+ PS +YNS ++
Sbjct: 509 ELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCC 568
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI-NLYGKASKSFMALKLFNEMRSHKCKPN 258
+ G AV + M P E+ ++ LY + SK A +F+ + +
Sbjct: 569 CELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE-KAKVVFSNLLQCGYNDD 627
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L++ + GL + E+ ++ G + Y L+E
Sbjct: 628 EVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEG 672
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ Y +KA F Y +L + + + TY LLK+ C SG ++ A AV +EM
Sbjct: 640 LMQGYASLGDTEKA-FQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAK 698
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+P + VYN IDG + G+ +A ++ Q+M+++ P TYT IN KA A
Sbjct: 699 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKA 758
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ EM + KPN+ TYT L+N +AR + E+A FE+++ AG +PD Y+ L+ +
Sbjct: 759 TEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTS 818
Query: 304 YRLISR 309
L+SR
Sbjct: 819 --LLSR 822
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A+C +++AEA+ REM + G+ +Y++ +DG GN +K + +F R+K
Sbjct: 392 YGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLK 451
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
PS +Y +INLY K K AL++ M+ K N+ TY+ L+N F +
Sbjct: 452 ECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWA 511
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A +FE G++PDV YN ++ A+
Sbjct: 512 NAFSVFEDFTKDGLKPDVVLYNNIITAF 539
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 81/149 (54%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A +VF + K GL P V+YN+ I GN +A+ + ++M
Sbjct: 496 TYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQM 555
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ +P+T T+ +I+ + +A + AL++F+ MR C P + TY AL+ +
Sbjct: 556 QKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQM 615
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A I +++ AG+ P+ + Y LM+ Y
Sbjct: 616 TKAVAILDEMNVAGVGPNEHTYTTLMQGY 644
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LE+ D S CIPT TY L+ + KA A+ EM G+ P+ Y + + G
Sbjct: 584 LEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQG 643
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G+ +KA + F ++ + + TY ++ K+ + AL + EM + N
Sbjct: 644 YASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRN 703
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
Y L++ +AR G EA ++ +Q++ G+ PD++ Y + + +A +I
Sbjct: 704 TFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQ 763
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAGLHEGKCS 339
M G +P+ +Y +++ + RA + E S
Sbjct: 764 EMEASGIKPNLKTYTTLINGWARASMPEKALS 795
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L++ Y G EKA F +R GL Y + + K G Q A+ +
Sbjct: 632 PNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAV 691
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +T Y ++I+ + + + A L +MR P+I TYT+ +NA +
Sbjct: 692 TKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCK 751
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS----------RMHM-GCEPDRAS 320
G ++A EI ++++ +GI+P++ Y L+ + S M + G +PD+A
Sbjct: 752 AGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAV 811
Query: 321 YNIMVDA 327
Y+ +V +
Sbjct: 812 YHCLVTS 818
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y +K + L + P+ +Y L+ Y G + KA + + M+ G
Sbjct: 430 MMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSG 489
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + Y+ I+G LK + A +F+ +D +P Y +I + A+
Sbjct: 490 IKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAI 549
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ +M+ + +P T+ +++ FAR G A EIF+ ++ +G P V+ YNAL+
Sbjct: 550 CMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGL 609
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+A ++ M++ G P+ +Y ++ Y G E Y V
Sbjct: 610 VEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTV 659
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L++K Y G + A F MR G+ PS+ VY+S I G + ++A+
Sbjct: 282 PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHC 341
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK + + + TY++++ + K + A F E + N Y ++ A +
Sbjct: 342 VRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQ 401
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
+ AE + +++ GI+ + Y+ +M+ Y +I G P S
Sbjct: 402 ICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVIS 461
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 462 YGCLINLYTKVG 473
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L+++ YG++ A T+ E + +R I P+ Y+ L+ AY + +E+A R+M++
Sbjct: 289 LMVKYYGRRGDMHHARQTF-ESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKE 347
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ + V Y+ + G K GN A F+ K + Y +I + +
Sbjct: 348 EGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDR 407
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L EM I Y +++ + G E+ +F++L+ G P V +Y L+
Sbjct: 408 AEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLIN 467
Query: 303 AYRLISRMHMGCE 315
Y + ++ E
Sbjct: 468 LYTKVGKVSKALE 480
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +A ++ +P TY + A C +G ++KA + +EM
Sbjct: 709 ILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEAS 768
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT-LMINLYGKAS 238
G+ P+ Y + I+G + P+KA+ F+ MK +P Y L+ +L +A+
Sbjct: 769 GIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRAT 824
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+K+ P+ + Y LM+ YG+ A + F MR+ +P+ Y+
Sbjct: 268 NWQAVVTAFERIKK----PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYS 323
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L++A+A EEA +++ GIE + Y+ ++ +
Sbjct: 324 SLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGF 364
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A + +EM G
Sbjct: 305 LLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G+ QKA + + M+ +P Y +MI+ +GK + A+
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAM 424
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
FN+MR +P++ T+ L++A + G + A E+FE+++ + P YN ++
Sbjct: 425 DAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLL 484
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++S M G P+ +Y +VD YGR+G
Sbjct: 485 GEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG 523
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F +MR+ G+ P V +N+
Sbjct: 386 QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTL 445
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A E+F+ M+ C P T TY +MINL G+ + +EM+
Sbjct: 446 IDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGL 505
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY
Sbjct: 506 VPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + H +A + E+ +S C P TY +++ E EA+ EM++ G
Sbjct: 445 LIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y + +D + G ++A++ + MK D +PS Y ++N Y + + AL
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 564
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M++ + +I +L+NAF + EA + + ++ G+ PDV Y LM+A
Sbjct: 565 NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKAL 624
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAGL 333
+ + + GC PDR + ++ R+GL
Sbjct: 625 IRVEQFDKVPVIYEEMITSGCAPDRKARAML-----RSGL 659
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM+
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A++ F +M+ + +P T+ +I+ + K + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRA 458
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF EMR C P TY ++N + E E + +++ G+ P++ Y L++
Sbjct: 459 AELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
Y R G +P Y+ +V+AY + GL
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A G +AE +LE L P Y LLK Y G L+ AE V EM +
Sbjct: 269 LISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQC 328
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G K+
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM++ +P+ Y +++ F + A + F +++ GIEPDV +N L
Sbjct: 389 FAVLR---EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTL 445
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++A+ L M C P +YNIM++ G EG
Sbjct: 446 IDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEG 492
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC----CQPSTETYTLMINLYG 235
+R++ P Y+ + LL +P A + +R+ D +P ++ +I+ +
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAA-LLERLLGDLRESRLEPDAPLFSDLISAFA 239
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDV 294
+A+ AL+L ++ P TAL++A G EAE +F + AG I+P
Sbjct: 240 RAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 295 YAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I + G PD A+Y+++VDAY RAG
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ C +G +E A VF EM K GL P V YN+ + G K G +A+ +
Sbjct: 225 PNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSV 284
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M R P T+T +I++ KA A+ L EMR + N T+TAL++ F +
Sbjct: 285 FAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCK 344
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
+G ++A +++ I+P V YNAL+ Y ++ RM G +PD +
Sbjct: 345 KGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVT 404
Query: 321 YNIMVDAYGRAG 332
Y+ ++ AY + G
Sbjct: 405 YSTILSAYCKNG 416
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + +A + E+ +P T+ L+ C +G LE+A + REMR+ G
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + + + + IDG K G A+ + M++ QPS Y +IN Y + A
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEAR 387
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L EM + KP++ TY+ +++A+ + G A ++ +Q+ G+ PD Y++L+
Sbjct: 388 ELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVL 447
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A+ L M +G +PD +Y ++D + + G
Sbjct: 448 CEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEG 486
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ A + E++ P +Y L+ YC G +A +VF EM + G+ P V + S
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSH 253
I + K GN ++AV + + M+ Q + T+T +I+ G K F+ AL EMR
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALID--GFCKKGFLDDALLAVREMRQC 361
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +P++ Y AL+N + G +EA E+ +++ G++PDV Y+ ++ AY
Sbjct: 362 RIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A E+ R P+ Y L+ YCM G +++A + REM G
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y++ + K G+ A ++ Q+M + P TY+ +I + + + A
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF M S +P+ TYT+L++ +EG E A + +++ AG+ PDV Y+ L+
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517
Query: 302 -------EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
EA RL+ +++ EP A NI DA R
Sbjct: 518 SKSARTKEAQRLLFKLYHE-EPVPA--NIKYDALMR 550
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L P TY +L++A C G ++A +V R+MR G P+AV YN+ + + G
Sbjct: 148 MLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE 207
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A + M+ +P+ T+ ++N KA + A K+F+EM P+ +Y
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNT 267
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
LV + + G EA +F ++ GI PDV + +L+ A L+ M G
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 314 CEPDRASYNIMVDAYGRAGL 333
+ + ++ ++D + + G
Sbjct: 328 LQMNEITFTALIDGFCKKGF 347
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L A F M G+ P+ YN + L G+ ++A+ + + M+ C P+ TY
Sbjct: 138 LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNT 197
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
++ + +A + A +L + MR KPN+ T+ ++VN + G E+A ++F+++ G
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 290 IEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+ PD +YN L+ Y + H G PD ++ ++ +AG
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAG 311
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ +L AYC +G A + ++M + G+ P A+ Y+S I L + A +
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVL 459
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M QP TYT +I+ + K AL L +EM P++ TY+ L+N ++
Sbjct: 460 FKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSK 519
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
+EA+ + +L P Y+ALM R
Sbjct: 520 SARTKEAQRLLFKLYHEEPVPANIKYDALMRCCR 553
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L++ +P TY+ L++ C L A +F+ M GL P V Y S IDG K G
Sbjct: 427 QMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEG 486
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N ++A+ + M + P TY+++IN K++++ A +L ++ + P Y
Sbjct: 487 NVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYD 546
Query: 264 AL---------------VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
AL + F +GL EA+++++ + D Y+ L+ +
Sbjct: 547 ALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGH 602
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 75/201 (37%), Gaps = 50/201 (24%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ +C G +E+A ++ EM K G+ P V Y+ I+GL K ++A +
Sbjct: 470 PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529
Query: 212 FQRMKRD--------------CCQPST--------------------------------- 224
++ + CC+ +
Sbjct: 530 LFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN 589
Query: 225 ---ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
Y+++I+ + + AL +M PN + +L+ +G+ EA+++
Sbjct: 590 LDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQV 649
Query: 282 FEQLQGAGIEPDVYAYNALME 302
+QL D A AL++
Sbjct: 650 IQQLLNCCSLADAEASKALID 670
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 109 NKKWDPIVLMSCV------SIL-LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
N K+D LM C S+L L++ + K L +A+ Y +LD Y++L+
Sbjct: 542 NIKYD--ALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLI 599
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C G + KA + ++M + G P++ S I GL + G +A ++ Q++ C
Sbjct: 600 HGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSL 659
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEM 250
E +I+L K L + + M
Sbjct: 660 ADAEASKALIDLNLKEGNVDAVLDVLHGM 688
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY +++ +Y GL++KA +F M P V YNS I+ L K G+ +A
Sbjct: 402 IPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHM 461
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F+ M+ P TY+++I +GK++K MA LF+EM S C PNI TY L++
Sbjct: 462 LFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLE 521
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EEA +++E ++ G+ PD Y+ L
Sbjct: 522 RRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 14/258 (5%)
Query: 92 THATWDDLINVSVQL-RLNKKWDPIVLMSCVSIL--LIEAYGQKSLHKKAEFTYLELLDS 148
T++ D++ QL RLN+ D SI L+++ + +A + + +S
Sbjct: 270 TYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNS 329
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
D + +L+ C + +A + M + G+ +YN L K
Sbjct: 330 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 389
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F +MK + P TY +MI+ YG+ A +LF M + CKP++ TY +L+N
Sbjct: 390 SNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINC 449
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
+ G +EA +F+++Q G +PDV+ Y+ L+E + +++ M GC P+
Sbjct: 450 LGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 509
Query: 318 RASYNIMVDAYGRAGLHE 335
+YNI++D R G E
Sbjct: 510 IVTYNILLDCLERRGKTE 527
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 52/301 (17%)
Query: 91 PTHATWDDLINVSVQLRLNKKW----DPIVLMSCVSILL-----IEAYGQKSLHKKAEFT 141
P T+ LI +S + K+ D +V CV L+ IEA G+ + K F
Sbjct: 196 PDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFV 255
Query: 142 YLELLDSRCIPTEDTYAL--------------------------------LLKAYCMSGL 169
+++++ C P + TY++ L+K+ C SG
Sbjct: 256 LSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGH 315
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+A VF M + S ++ L +A+++ M Y +
Sbjct: 316 ASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNM 375
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ + GK + LF++M+++ P++ TY +++++ R GL ++A E+FE ++ +
Sbjct: 376 VFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS 435
Query: 290 IEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKC 338
+PDV YN+L+ EA+ L M G +PD +Y+I+++ +G++ E C
Sbjct: 436 CKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMAC 495
Query: 339 S 339
S
Sbjct: 496 S 496
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++A+ S + K V+ EMR+ G YN +D L K G +A ++F+ M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C P TYT++I + GKA ++ L F+EM S C N+ + ++ A + +
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 249
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ + ++ +P+ + Y+ ++ ++H
Sbjct: 250 DKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 285
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 47/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + +A + ++ C+P TY +L++ +G K + F EM
Sbjct: 168 MLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK 227
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---- 239
G + + +N+ I+ L K K + + +M + CQP+ TY++ +++ +
Sbjct: 228 GCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRL 287
Query: 240 --------SFMALKLFNEMRSHKCKPNICTYTALVNAFAR-----------------EGL 274
FM +++ + CK + N F R E L
Sbjct: 288 NEVLDICSRFMNRSIYSYLVKSLCKSGHASEAH--NVFCRMWNSHEKGDRDAFVSMLEVL 345
Query: 275 CE-----EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDR 318
C EA ++ + GI DV YN + A L +M G PD
Sbjct: 346 CNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDV 405
Query: 319 ASYNIMVDAYGRAGL 333
+YNIM+ +YGR GL
Sbjct: 406 FTYNIMISSYGRVGL 420
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I +YG+ L KA + + S C P TY L+ G L++A +F+EM++
Sbjct: 410 IMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEK 469
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ I+ K + A +F M + C P+ TY ++++ + K+ A
Sbjct: 470 GYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEA 529
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
KL+ M+ P+ TY+ L
Sbjct: 530 HKLYETMKQQGLIPDSITYSIL 551
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+GL S Y + L+ K ++++ M+R + Y ++++ KA
Sbjct: 121 KWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVD 180
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +M+ C P+ TYT L+ + G + F+++ G ++ A+N ++
Sbjct: 181 QAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTII 240
Query: 302 EA-----------YRLISRMHMGCEPDRASYNIMVDAYGRAG-LH 334
EA + L + C+P++ +Y+I +D G LH
Sbjct: 241 EALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 285
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A + E+ + P TY++L++ + S +E A ++F EM G
Sbjct: 446 LINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG 505
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P+ V YN +D L + G ++A ++++ MK+ P + TY+++ L ++ ++
Sbjct: 506 CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRT 561
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +++ +C G + +A++VF + K+GL PS V +N+ ++G ++ G+ + + M
Sbjct: 139 FNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LFNEM PN T+T L++ + G+ +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ G PD+ YN L+ + LI M M G +PD+ +Y ++
Sbjct: 259 SAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGCCKEG 325
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 MRRAQSVFDAITKW----GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S +A + E+LD +P T+ L+ +C +G+++ A ++++M
Sbjct: 208 TYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G P + YN+ I GL K G+ ++ + M + +P TYT +I+ K
Sbjct: 268 LSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTALV+ +EG ++AE++F ++ G++PD Y +
Sbjct: 328 ETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C +++A +F EM GL P+ V + + ID K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K L +EM + KP+ TYT L++ +
Sbjct: 264 YKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCK 323
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E A E +++ I D AY AL+ +A ++ M +G +PD +
Sbjct: 324 EGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGT 383
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 384 YTMIINEFCKKG 395
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + + A Y ++L P TY L+ C G L++ A+ EM G
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ + A E +RM ++ + YT +++ + ++ A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAE 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+F EM S KP+ TYT ++N F ++G A + +++Q G P V
Sbjct: 367 KMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCV 416
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 19/249 (7%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD +N+ ++ NK P V+ I + YG+ S A ++++ + P T
Sbjct: 270 DDALNLFTEME-NKGVRPNVITYSSLISCLCNYGRWS---DASRLLSDMIERKINPNLVT 325
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
++ L+ A+ G L KAE ++ EM K + P+ Y+S I+G +A ++ + M
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P+ TY +IN + KA + ++LF EM N TYT L++ F + C+
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCEPDRASYNI 323
A+ +F+Q+ G+ P++ YN L++ + + R M EPD +YNI
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM--EPDIYTYNI 503
Query: 324 MVDAYGRAG 332
M++ +AG
Sbjct: 504 MIEGMCKAG 512
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ +K KAE Y E++ P TY+ L+ +CM L +A+ + M +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ I+G K K +E+F+ M + +T TYT +I+ + +A A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M S PNI TY L++ + G +A +FE LQ + +EPD+Y YN ++E
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 305 RLISRMHMG 313
+ MG
Sbjct: 509 CKAGKWKMG 517
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 134 LHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
LH KA + L+D C P TY ++ C G + A + +M + +
Sbjct: 195 LHNKAS-EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANV 253
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKL 246
V+Y++ ID L K + A+ +F M+ +P+ TY+ +I+ YG+ S A +L
Sbjct: 254 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD---ASRL 310
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
++M K PN+ T++AL++AF ++G +AE+++E++ I+P+++ Y++L+ + +
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 307 ISRM-----------HMGCEPDRASYNIMVDAYGRA 331
+ R+ C P+ +YN +++ + +A
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T LL +C + A A+ +M + G P V + + I GL +AV +
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + CQP TY ++N K + +AL L N+M + K + N+ Y+ ++++ +
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F +++ G+ P+V Y++L+ +A RL+S M P+ +
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 326 FSALIDAFVKKG 337
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C L A A+ +M K G P V NS ++G G AV + +M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+P T T+T +I+ L+ KAS+ A+ L + M C+P++ TY A+VN +
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASE---AVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G + A + +++ A IE +V Y+ ++ +A L + M + G P+ +Y
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 322 NIMVDA---YGR 330
+ ++ YGR
Sbjct: 292 SSLISCLCNYGR 303
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ ++ + C + A +F EM G+ P+ + Y+S I L G A + M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T++ +I+ + K K A KL+ EM PNI TY++L+N F
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR 318
EA+++ E + P+V YN L+ + R+ G E R
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A +F M + PS + ++ + + K + ++M+ + TY +
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL L +M +P+I T +L+N F +A + +Q+ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+PD + L+ EA LI RM GC+PD +Y +V+ + G
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 80/191 (41%), Gaps = 11/191 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
SR P+ ++ LL A + + +M G+ + YN I+ +
Sbjct: 72 SRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSL 131
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ + +M + +P T ++N + ++ A+ L ++M KP+ T+T L++
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEP 316
EA + +++ G +PD+ Y A++ A L+++M E
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 317 DRASYNIMVDA 327
+ Y+ ++D+
Sbjct: 252 NVVIYSTVIDS 262
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E++ IP TY+ ++ C + ++ A +F EM+ + P Y
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G Q+A + F M RD C P+ TYT +I+ Y KA K A +LF M S C
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV----------------YAYNA 299
PN+ TYTAL++ + G E+A +I+ +++G PDV + Y A
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ EA L+ M + GCEP+ Y+ ++D + + G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E++ C P TY L+ AY + + A +F M
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE----------------TY 227
G P+ V Y + IDG K G +KA +I+ RM+ + P + TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A L + M C+PN Y AL++ F + G +EA+ +F ++
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P+VY Y++L+ E
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AYRL+S M GC P+ +Y M+D +G+AG
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ +C G L++A+ VF +M + G P+ Y+S ID L K A+
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ RM + C P+ YT MI+ K K+ A +L + M C PN+ TYTA+++ F
Sbjct: 727 KVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF 786
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDR- 318
+ G ++ E+ Q+ G P+ Y L+ +A++L+ M P
Sbjct: 787 GKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHM 846
Query: 319 ASYNIMVDAYGR 330
A Y +++ + R
Sbjct: 847 AGYRKVIEGFNR 858
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+LD+ + + + L + C +G EKA ++ REM G P Y+ I
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L A +F+ MK + P TYT++I+ + K A K F+EM C P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + A E+FE + G P+V Y AL++ + ++ C+
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 52/246 (21%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG------ 198
++ C P+ + L+ AYC SG A + ++M G P VVYN I G
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 199 -----------------------------------LLKGGNPQKAVEIFQRMKRDCCQPS 223
L G +KA I + M P
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
T TY+ +I L ASK A LF EM+S+ P++ TYT L+++F + GL ++A + F+
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 284 QLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
++ G P+V Y AL+ AY +M GC P+ +Y ++D + ++G
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599
Query: 333 LHEGKC 338
E C
Sbjct: 600 QIEKAC 605
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + +++A + M G P+ +VY++ IDG K G +A +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M P+ TY+ +I+ K + +ALK+ + M + C PN+ YT +++ +
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
G +EA + ++ G P+V Y A+++ + L+ +M GC P+ +
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 321 YNIMVDAYGRAGL 333
Y ++++ AGL
Sbjct: 814 YRVLINHCCAAGL 826
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +A+ + ++ + P TY+ L+ L+ A V M +
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ ++Y IDGL K G +A + M+ C P+ TYT MI+ +GKA K L
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +M + C PN TY L+N GL ++A ++ ++++ + Y ++E +
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856
Query: 305 RLISRMHMG---------CEPDRASYNIMVDAYGRAG 332
+ +G P +Y I++D++ +AG
Sbjct: 857 NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAG 893
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY L++ + + L+ A V REM G ++ L K G ++A+ +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ + + T YT MI+ +AS A+ + MRS C PN+ TY L+ R
Sbjct: 290 IEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
+ + I + G P +N+L+ AY+L+ +M GC+P
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
YNI++ G G +E S ++EL+ K Y
Sbjct: 407 YNILIG--GICG-NEKLPSLDVLELAEKAY 433
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L++ C +GL A ++ G PS + YN+ + L+ A + + M
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
T ++L KA + AL L + + K + YT +++ L EEA
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDA 327
+ +++ + P+V Y L+ R++S M GC P R +N ++ A
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378
Query: 328 YGRAG 332
Y R+G
Sbjct: 379 YCRSG 383
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 52/229 (22%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ C + L E+A MR P+ V Y + G L+ + I M
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL----------- 265
+ C PS + +I+ Y ++ A KL +M C+P Y L
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421
Query: 266 --------------------------VNAFAR----EGLCEEAEEIFEQLQGAGIEPDVY 295
V+ AR G E+A I ++ G PD
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481
Query: 296 AYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
Y+ ++ A+ L M PD +Y I++D++ + GL
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG--NPQKAVEIFQ 213
Y ++ Y SG KA+ + MR+ G P + +N+ I+ LK G P AVE+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
++ +P TY +++ + S A+K+F +M +H+C+P++ TY A+++ + R G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHMGCEPDRAS 320
L EAE +F +L+ G PD YN+L+ E Y+ + +M G D +
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG--KDEMT 404
Query: 321 YNIMVDAYGRAG 332
YN ++ YG+ G
Sbjct: 405 YNTIIHMYGKQG 416
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 144 ELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYID 197
EL+D+ C+P ++ L+ A SG L AV +R GL P A+ YN+ +
Sbjct: 246 ELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLS 305
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ N AV++F+ M+ CQP TY MI++YG+ + A +LF E+ P
Sbjct: 306 ACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP 365
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----- 312
+ TY +L+ AFARE E+ +E+++Q+Q G D YN ++ Y ++ +
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 313 -------GCEPDRASYNIMVDAYGRA 331
G PD +Y +++D+ G+A
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKA 451
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 16/218 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P TY ++ Y GL +AE +F E+ G P AV YNS + + N +K
Sbjct: 327 RCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKV 386
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK-PNICTYTALVN 267
E++Q+M++ TY +I++YGK + +AL+L+ +M+ + P+ TYT L++
Sbjct: 387 KEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLID 446
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEP 316
+ + EA + ++ GI+P + Y+AL+ Y + + G +P
Sbjct: 447 SLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVE--LSVKHYPA 352
D +Y++M+D R +E + ++ L +S H P+
Sbjct: 507 DNLAYSVMLDVLLRG--NETRKAWGLYRDMISDGHTPS 542
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ L +AE ++EL P TY LL A+ EK + V+++M+K G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ-PSTETYTLMINLYGKASKSFMA 243
+ YN+ I K G A+++++ MK + P TYT++I+ GKA+++ A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L +EM KP + TY+AL+ +A+ G EEAE+ F + +G +PD AY+ +++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L+++A+ + + + Y + + +PT Y ++++ C + AE + EM +
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
++NS + + +K V+++QR+K +P TY +I +Y + +
Sbjct: 921 ANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE 980
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
L +MR+ P + TY +L++AF ++ E+AE++FE+L G++ D Y+ +M
Sbjct: 981 GYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK 1040
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A +L+ M + G EP A+ ++++ +Y +G
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEAYG++ L +KAE L S P T+ L+ AY G E+A A+F M + G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ N + L G ++ + + ++ + S + LM++ + +A F
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+++ M++ P I Y ++ + +AE + +++ A + ++ +N++++ Y
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGR 330
I G EPD +YN ++ Y R
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 22/236 (9%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFR--EMRKYGLPPS 188
K L K+ ++LD+R + T Y ++K+ ++A VF +R + P +
Sbjct: 133 KILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESW-QRALEVFEWLNLRHWHSPNA 191
Query: 189 AVVYNSYIDGLLKGGNPQK-AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+V + I G+L N + AVEIF R + + Y M+ +Y ++ K A +L
Sbjct: 192 RMV--AAILGVLGRWNQESLAVEIFTRAE-PTVGDRVQVYNAMMGVYSRSGKFSKAQELV 248
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEE--AEEIFEQLQGAGIEPDVYAYNALMEAYR 305
+ MR C P++ ++ L+NA + G A E+ + ++ +G+ PD YN L+ A
Sbjct: 249 DAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACS 308
Query: 306 LISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
S + C+PD +YN M+ YGR GL + +EL +K +
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL-AAEAERLFMELELKGF 363
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y +KK Y + ++ P E TY L+ YC E+ + ++MR G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S I K ++A ++F+ + + Y M+ + + A
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL M++ +P + T L+ +++ G +EAE++ L+ +E Y+++++AY
Sbjct: 1053 KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAY 1112
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDA 327
RL+ G EPD + V A
Sbjct: 1113 LRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C + Y LL + +A VF ++R G S V S + K G P+ A
Sbjct: 677 CFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAH 736
Query: 210 EIFQRMKRD----CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++ + + C P YT +I YGK A + +R P++ T+ +L
Sbjct: 737 QVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSL 793
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGC 314
++A+A+ G E A IF + G P V + N L+ A + R+ MG
Sbjct: 794 MSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGF 853
Query: 315 EPDRASYNIMVDAYGRAG-LHEGKCSYS 341
+ ++S +M+DA+ RAG + E K YS
Sbjct: 854 KISKSSILLMLDAFARAGNIFEVKKIYS 881
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++AY L +KAE+V +R+ G P +NS + + G ++A IF M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 217 RDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
RD P+ E+ ++++ + G+ + ++ ++ +M K +I +++AFAR G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL---MLDAFARAG 871
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALME 302
E ++I+ ++ AG P + Y ++E
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY Q +++A + ++ PT ++ +LL A C+ G LE+ V E++ G
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA- 243
S +D + GN + +I+ MK P+ Y +MI L K + A
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 244 ---------------------LKLFNEMRSHK-------------CKPNICTYTALVNAF 269
LK++ + +K +P+ TY L+ +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
R+ EE + +Q++ G++P + Y +L+ A+
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ + +A E+LD PT TY+ L+ Y +G E+AE F M +
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G P + Y+ +D LL+G +KA +++ M D PS Y LMI
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 134/261 (51%), Gaps = 22/261 (8%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVL-MSCVSI--------LLIEAYGQKSLHKKAEFT 141
P H T++ LIN +L + K + +V+ M + LI+AYG +K FT
Sbjct: 402 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC-FT 460
Query: 142 YLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
L + + I ++ ++ ++KA+C +G + +A A+ +M + P+A VYNS ID +
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ ++A + ++MK S TY L++ ++S+ A +L +R+ +P++
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-MGC----- 314
+Y +++A +G ++A E+ +++ GI P + Y+ L+ A R+H M C
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640
Query: 315 -----EPDRASYNIMVDAYGR 330
EP + Y IMVDAY R
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVR 661
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + KAE +E+ S P+ +T+ L+ AY +G LEK V +M++ G
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 469
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + + S + K G +AV I M P+ + Y +I+ Y ++ + A
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 529
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L +M++ +I TY L+ R +EAEE+ L+ G+ PDV +YN ++
Sbjct: 530 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 589
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG-LHEGKCSY 340
+A L+ M+ G P +Y+ +V A AG +H+ +C Y
Sbjct: 590 CNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLY 637
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE L+ + +PT Y L+ YC L A +F +M+ + P + YN+ I
Sbjct: 352 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL K KA ++ M++ PS ET+ +I+ YG A + + ++M+ K
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ ++ ++V AF + G EA I + + + P+ YN++++AY
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ P TY++L +G ++F E K G+ A + ++GL K G
Sbjct: 289 EMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 348
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++ + + P+T Y +IN Y + A +F +M+S +P+ TY
Sbjct: 349 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM- 312
AL+N + + +AE++ +++ +G++P V +N L++AY ++S M
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G + D S+ +V A+ + G
Sbjct: 469 GIKSDVISFGSVVKAFCKNG 488
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 155 DTYAL--LLKAYCMSGLLEKAEAVFREM-RKYGLPP-SAVVYNSYIDGLLKGGNPQKAVE 210
DT+A +++A +G L+ A A+ R M R G PP A YN I GL + G A++
Sbjct: 156 DTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 215
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M P+ TY MI+ + K +L ++M KPNI TY L++
Sbjct: 216 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 275
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI--SRMHMGCEPDRASYNIMVDAY 328
R G +E + +++ + PD + Y+ L + SR + + +M+ AY
Sbjct: 276 RAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 335
Query: 329 GRAGLHEGKC 338
+ L G C
Sbjct: 336 TCSILLNGLC 345
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 104/278 (37%), Gaps = 82/278 (29%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ SG A VF EM G+ P+ + YN+ IDG +KGG+ + +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M D +P+ TY ++++ +A + L +EM SH P+ TY+ L + R
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311
Query: 272 ------------------------------EGLCEE-----AEEIFEQLQGAGIEPDVYA 296
GLC++ AE++ E L G+ P
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371
Query: 297 YNALMEAY------------------RLISRMHM-------------------------- 312
YN L+ Y R I H+
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 313 --GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
G +P ++N ++DAYG AG E KC L ++ K
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLE-KCFTVLSDMQQK 468
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 20/236 (8%)
Query: 50 YGS-GFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF---DSLPPTHATWDDLINVSVQ 105
YG+ G ++ F VLS Q+ ++ + ++ AF +P A DD+I
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIK--SDVISFGSVVKAFCKNGKIPEAVAILDDMI----- 501
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+ + + V +I+AY + ++A ++ +S + TY LLLK C
Sbjct: 502 ------YKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 555
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
S +++AE + +R GL P V YN+ I G+ KA+E+ Q M + +P+
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
TY +++ A + L+ +M +P+ Y +V+A+ R CE ++
Sbjct: 616 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR---CENDSKV 668
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ + S +AE L + P +Y ++ A C G +KA + +EM KY
Sbjct: 549 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ Y++ + L G ++Q+M +PS+ Y +M++ Y +
Sbjct: 609 GIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKV 668
Query: 244 LKLFNEM 250
L EM
Sbjct: 669 ASLKKEM 675
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG--NPQKAVEIFQ 213
Y ++ Y SG KA+ + MR+ G P + +N+ I+ LK G P AVE+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
++ +P TY +++ + S A+K+F +M +H+C+P++ TY A+++ + R G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHMGCEPDRAS 320
L EAE +F +L+ G PD YN+L+ E Y+ + +M G D +
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG--KDEMT 404
Query: 321 YNIMVDAYGRAG 332
YN ++ YG+ G
Sbjct: 405 YNTIIHMYGKQG 416
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 144 ELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYID 197
EL+D+ C+P ++ L+ A SG L AV +R GL P A+ YN+ +
Sbjct: 246 ELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLS 305
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ N AV++F+ M+ CQP TY MI++YG+ + A +LF E+ P
Sbjct: 306 ACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP 365
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----- 312
+ TY +L+ AFARE E+ +E+++Q+Q G D YN ++ Y ++ +
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 313 -------GCEPDRASYNIMVDAYGRA 331
G PD +Y +++D+ G+A
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKA 451
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 16/218 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P TY ++ Y GL +AE +F E+ G P AV YNS + + N +K
Sbjct: 327 RCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKV 386
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK-PNICTYTALVN 267
E++Q+M++ TY +I++YGK + +AL+L+ +M+ + P+ TYT L++
Sbjct: 387 KEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLID 446
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEP 316
+ + EA + ++ GI+P + Y+AL+ Y + + G +P
Sbjct: 447 SLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVE--LSVKHYPA 352
D +Y++M+D R +E + ++ L +S H P+
Sbjct: 507 DNLAYSVMLDVLLRG--NETRKAWGLYRDMISDGHTPS 542
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ L +AE ++EL P TY LL A+ EK + V+++M+K G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ-PSTETYTLMINLYGKASKSFMA 243
+ YN+ I K G A+++++ MK + P TYT++I+ GKA+++ A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L +EM KP + TY+AL+ +A+ G EEAE+ F + +G +PD AY+ +++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L+++A+ + + + Y + + +PT Y ++++ C + AE + EM +
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
++NS + + +K V+++QR+K +P TY +I +Y + +
Sbjct: 921 ANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE 980
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
L +MR+ P + TY +L++AF ++ E+AE++FE+L G++ D Y+ +M
Sbjct: 981 GYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK 1040
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A +L+ M + G EP A+ ++++ +Y +G
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEAYG++ L +KAE L S P T+ L+ AY G E+A A+F M + G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ N + L G ++ + + ++ + S + LM++ + +A F
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+++ M++ P I Y ++ + +AE + +++ A + ++ +N++++ Y
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGR 330
I G EPD +YN ++ Y R
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 22/236 (9%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFR--EMRKYGLPPS 188
K L K+ ++LD+R + T Y ++K+ ++A VF +R + P +
Sbjct: 133 KILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESW-QRALEVFEWLNLRHWHSPNA 191
Query: 189 AVVYNSYIDGLLKGGNPQK-AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+V + I G+L N + AVEIF R + + Y M+ +Y ++ K A +L
Sbjct: 192 RMV--AAILGVLGRWNQESLAVEIFTRAE-PTVGDRVQVYNAMMGVYSRSGKFSKAQELV 248
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEE--AEEIFEQLQGAGIEPDVYAYNALMEAYR 305
+ MR C P++ ++ L+NA + G A E+ + ++ +G+ PD YN L+ A
Sbjct: 249 DAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACS 308
Query: 306 LISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
S + C+PD +YN M+ YGR GL + +EL +K +
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL-AAEAERLFMELELKGF 363
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y +KK Y + ++ P E TY L+ YC E+ + ++MR G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S I K ++A ++F+ + + Y M+ + + A
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL M++ +P + T L+ +++ G +EAE++ L+ +E Y+++++AY
Sbjct: 1053 KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAY 1112
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDA 327
RL+ G EPD + V A
Sbjct: 1113 LRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C + Y LL + +A VF ++R G S V S + K G P+ A
Sbjct: 677 CFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAH 736
Query: 210 EIFQRMKRD----CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++ + + C P YT +I YGK A + +R P++ T+ +L
Sbjct: 737 QVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSL 793
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGC 314
++A+A+ G E A IF + G P V + N L+ A + R+ MG
Sbjct: 794 MSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGF 853
Query: 315 EPDRASYNIMVDAYGRAG-LHEGKCSYS 341
+ ++S +M+DA+ RAG + E K YS
Sbjct: 854 KISKSSILLMLDAFARAGNIFEVKKIYS 881
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++AY L +KAE+V +R+ G P +NS + + G ++A IF M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 217 RDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
RD P+ E+ ++++ + G+ + ++ ++ +M K +I +++AFAR G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL---MLDAFARAG 871
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALME 302
E ++I+ ++ AG P + Y ++E
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY Q +++A + ++ PT ++ +LL A C+ G LE+ V E++ G
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA- 243
S +D + GN + +I+ MK P+ Y +MI L K + A
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 244 ---------------------LKLFNEMRSHK-------------CKPNICTYTALVNAF 269
LK++ + +K +P+ TY L+ +
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
R+ EE + +Q++ G++P + Y +L+ A+
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ + +A E+LD PT TY+ L+ Y +G E+AE F M +
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G P + Y+ +D LL+G +KA +++ M D PS Y LMI
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 143 LELLDS----RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD C P +Y +L A+C +++A A M G P V YN+ +
Sbjct: 312 MEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTA 371
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L +GG AVE+ ++K C P +Y +I+ KA K+ AL+L NEM + +P+
Sbjct: 372 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPD 431
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
I TY+ + + REG EEA + F ++Q GI P+ YNA++ A L +
Sbjct: 432 IITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFT 491
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGL 333
M GC P+ ++Y I+++ GL
Sbjct: 492 YMVSNGCMPNESTYTILIEGLAYEGL 517
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C+P TY +LL+A C ++A + EMR G P V YN ++G+ + G
Sbjct: 177 DMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEG 236
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E + + C+P+T +Y +++ A + A KL EM PN+ T+
Sbjct: 237 RVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFN 296
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM---- 312
L++ R GL E A EI +Q+ G P+ +YN ++ A+ R ++ + +
Sbjct: 297 MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD SYN ++ A R G
Sbjct: 357 GCYPDIVSYNTLLTALCRGG 376
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ C P +Y ++ YC++G L+ A + M + P YN+ I GL G
Sbjct: 114 ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDN 170
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ + M R C P TYT+++ K S A+KL +EMR C P+I TY +VN
Sbjct: 171 ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVN 230
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
+EG ++A E + L G EP+ +YN ++ +A +L++ M G P
Sbjct: 231 GICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP 290
Query: 317 DRASYNIMVDAYGRAGLHE 335
+ ++N+++ R GL E
Sbjct: 291 NVVTFNMLISFLCRRGLVE 309
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EA ++S +K+A E+ D C P TY +++ C G ++ A + + Y
Sbjct: 192 ILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSY 251
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN + GL + A ++ M R P+ T+ ++I+ + A
Sbjct: 252 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPA 311
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ +++ + C PN +Y +++AF ++ + A E + +G PD+ +YN L+ A
Sbjct: 312 MEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTA 371
Query: 304 Y-------RLISRMHM----GCEPDRASYNIMVDAYGRAGLHE 335
+ +H GC P SYN ++D +AG E
Sbjct: 372 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++LK C + E AE + EM + G PP+ V +N I L + G + A+
Sbjct: 253 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAM 312
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI ++ + C P++ +Y +++ + K K A+ M S C P+I +Y L+ A
Sbjct: 313 EILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTAL 372
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
R G + A E+ QL+ G P + +YN ++ EA L++ M G +PD
Sbjct: 373 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDI 432
Query: 319 ASYNIMVDAYGRAGLHE 335
+Y+ + R G E
Sbjct: 433 ITYSTISSGLCREGRIE 449
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
QK + + F L ++ S C P +Y LL A C G ++ A + +++ G P +
Sbjct: 340 QKKMDRAMAFVEL-MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLI 398
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------------------- 227
YN+ IDGL K G ++A+E+ M QP TY
Sbjct: 399 SYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKV 458
Query: 228 --------TLMIN--LYG--KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
T++ N L G K + A+ LF M S+ C PN TYT L+ A EGL
Sbjct: 459 QDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLV 518
Query: 276 EEAEEIFEQLQGAGI 290
+EA E+ +L G+
Sbjct: 519 KEAREMMAELCSRGV 533
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 20/254 (7%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ + + LR WD ++L+ AYG+ +AE + PT
Sbjct: 121 WNLVSEILEWLRTQHWWD---FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPTVI 177
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ L++AY + KAEAVF M+ G PS + Y + L++G ++A IF+ +
Sbjct: 178 SQTALMEAYGRAKQYRKAEAVFHRMQTSGPEPSPITYQIILKSLVEGDKYKEAEAIFEDL 237
Query: 216 ---KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
KR +P + + +MI +Y K+ A KLF +M + T+ +L++ E
Sbjct: 238 LSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLMSF---E 294
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASY 321
G +E I++Q+Q AG++PDV +Y+ L++AY R + G P R SY
Sbjct: 295 GDYKEVSSIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSY 354
Query: 322 NIMVDAYGRAGLHE 335
NI++DA+ +GL E
Sbjct: 355 NILLDAFAISGLVE 368
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG+ ++A + E+LD+ PT +Y +LL A+ +SGL+E+A+ VF+ MR++
Sbjct: 321 LLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRH 380
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y + + + + A + F+R+K D +P+ Y ++ Y K
Sbjct: 381 RVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKV 440
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++++ MR +PN +T +++ R A F +++ G PD A N L+
Sbjct: 441 MRVYERMRMQGVEPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRGYPPDKKAKNILL 498
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 135/329 (41%), Gaps = 92/329 (27%)
Query: 108 LNKK-WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA--- 163
+NKK + P V+ L+EAYG+ ++KAE + + S P+ TY ++LK+
Sbjct: 167 MNKKGYRPTVISQTA---LMEAYGRAKQYRKAEAVFHRMQTSGPEPSPITYQIILKSLVE 223
Query: 164 -----------------------------------YCMSGLLEKAEAVFREMRKYGLPPS 188
Y SG +A +F +M + G+P S
Sbjct: 224 GDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQS 283
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V +NS + G+ ++ I+ +M+R +P +Y+L+I YGKA + A +F
Sbjct: 284 TVTFNSLMSF---EGDYKEVSSIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFE 340
Query: 249 EM-----------------------------------RSHKCKPNICTYTALVNAFAREG 273
EM R H+ +P++C+YT ++ A+
Sbjct: 341 EMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRVEPDLCSYTTMLLAYVNAS 400
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYN 322
+ AE+ F +++ G+ P+V Y LM+ Y R+ RM M G EP++ +
Sbjct: 401 DMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFT 460
Query: 323 IMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
++D +GR G E+ + YP
Sbjct: 461 TIMDVHGRNSDF-GNAVIWFNEMETRGYP 488
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R +P +Y+ ++ + +G ++A +F EMR + V YN+ + K G ++A
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++I + M + TY ++ YGK K K+F EM+ PN+ TY+ L++
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDG 523
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPD 317
+++ GL +EA E+F + + AG+ DV Y+AL++ A LI M G P+
Sbjct: 524 YSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 318 RASYNIMVDAYGRAGLHEGKCSYS 341
+YN ++DA+GR+ E YS
Sbjct: 584 VVTYNSIIDAFGRSATMERSADYS 607
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRM 215
++ L+ AY SGL E+A +VF M++YGL P+ V YN+ ID KGG K V + F M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R+C QP T+ ++ + + A LF+EM + + + ++ +Y L++A + G
Sbjct: 331 QRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A EI Q+ I P+V +Y+ ++ EA L M ++ DR SYN +
Sbjct: 391 DLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTL 450
Query: 325 VDAYGRAGLHE 335
+ Y + G E
Sbjct: 451 LSIYTKVGRSE 461
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + K + + + C+ P T+ LL GL E A +F EM
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNR 368
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ YN+ +D + KGG A EI +M P+ +Y+ +I+ + KA + A
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LF EMR + +Y L++ + + G EEA +I ++ GI+ DV YNAL+
Sbjct: 429 LNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
Y ++ + M P+ +Y+ ++D Y + GL++
Sbjct: 489 YGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G + A+ +F G + +++ I + G ++A+ +F MK +P+ TY
Sbjct: 247 GKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 228 TLMINLYGKASKSFMAL-KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+I+ GK F + K F+EM+ + +P+ T+ +L+ +R GL E A +F+++
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMS 366
Query: 287 GAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
IE DV++YN L++A +M + E P+ SY+ ++D + +AG
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAG 423
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG++ + + + + E+ +P TY+ L+ Y GL ++A VFRE + G
Sbjct: 485 LLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAG 544
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK----- 239
L V+Y++ ID L K G AV + M ++ P+ TY +I+ +G+++
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSA 604
Query: 240 ----------SFMALKLFNEMRSHKCKPNICTYTALVNAFA----REGLCEEA--EEIFE 283
S AL E ++ T+ N +EG+ E + E+F
Sbjct: 605 DYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFR 664
Query: 284 QLQGAGIEPDVYAYNALMEA 303
++ I+P+V ++A++ A
Sbjct: 665 KMHQLEIKPNVVTFSAILNA 684
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + L+K+A + E + Y+ L+ A C +GL+ A ++ EM K G
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQR----MKRDCCQPSTETY-TLMINLYGKAS- 238
+ P+ V YNS ID + +++ + TET +I L+G+ +
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTS 639
Query: 239 ----------KSFMA-----LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
K M L++F +M + KPN+ T++A++NA +R E+A + E
Sbjct: 640 EGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
Query: 284 QLQ 286
+L+
Sbjct: 700 ELR 702
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI+ G+ K +A ++F S + ++AL++A+ R GL EEA +F ++ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 290 IEPDVYAYNALMEA-----------YRLISRMHMGC-EPDRASYNIMVDAYGRAGLHEG 336
+ P++ YNA+++A + M C +PDR ++N ++ R GL E
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEA 357
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMH 311
+A+++ R G A+ IFE G VYA++AL+ AY S
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 312 MGCEPDRASYNIMVDAYGRAGL 333
G P+ +YN ++DA G+ G+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGM 318
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 13/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ +S EKA ++ EM G P V YN+ +DGL K G KA+EI
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368
Query: 212 FQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F++M + C P+ TYT++I+ + K + A+KL EM P+ T+T ++
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRA 319
+E +EA E+FE + G +PD +N ++ Y I+R + GC P A
Sbjct: 429 KESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLA 487
Query: 320 SYNIMVDAYGRAG 332
+Y +V + R G
Sbjct: 488 TYTALVTGFCRTG 500
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 29/289 (10%)
Query: 71 RFVQREVDSNTIWDAFD------SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSIL 124
+ + R D NT W+ F T ++L++V V+ R + ++
Sbjct: 74 KVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVF 133
Query: 125 ---------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
L+ + + KKA + E+ DS I ++ ++L+ C G + A
Sbjct: 134 EPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSG-IAVLRSHNIVLRGLCSGGKISMAWE 192
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
VF++M P+ + Y IDGL K KA+ +F++M P TY +I+ G
Sbjct: 193 VFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLG 251
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL-QGAGIEPDV 294
K + A LF E R+ C P + TY +++ + G E A +++ + + ++PD+
Sbjct: 252 KQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDM 311
Query: 295 YAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ Y+AL+ L +R + GC PD +YN ++D ++G
Sbjct: 312 FTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSG 360
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + KA + +++D P TY L+ +++A +F E R
Sbjct: 210 IMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 269
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFM 242
G P+ V YN+ IDGL K G + A+ ++ M R+ +P TY+ +IN +++
Sbjct: 270 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEK 329
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI-EPDVYAYNALM 301
A +L+ EM C P++ TY L++ + G ++A EIF ++ + +P+V Y L+
Sbjct: 330 AYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLI 389
Query: 302 EAYRLISRM 310
+ + + R+
Sbjct: 390 DRFCKVDRL 398
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 37/205 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR------ 178
LI + +KA Y E+LD+ C P TY LL C SG +KA +FR
Sbjct: 317 LINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGN 376
Query: 179 ------------------------------EMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
EM L P AV + + I L K +A
Sbjct: 377 VCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEA 436
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+F+ + + C+P + + M+ Y K ++ A KL + M C P + TYTALV
Sbjct: 437 HELFESIGK-TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTG 495
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPD 293
F R G +A ++ ++ G P+
Sbjct: 496 FCRTGRYSDALIMYHEMIEMGFPPE 520
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 46/258 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + ++A+ LE++D P TY L+ + G +E+A + EM
Sbjct: 281 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 340
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + +++N+ ++G+ K G +KA+EI Q M +P ++TY+L+I + + A
Sbjct: 341 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 400
Query: 244 LKLFNEMRSHK-----------------------------------CKPNICTYTALVNA 268
+L +EM+ K KPN YT L+ A
Sbjct: 401 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---------MEAYR--LISRMHMGCEPD 317
A+EG EE+ I E+++ GI PDV+ YN+L ME R L+ + P+
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520
Query: 318 RASYNIMVDAYGRAGLHE 335
+Y +D Y +AG E
Sbjct: 521 AHTYGAFIDGYSKAGEME 538
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 144 ELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+LL+ CI P TY +L+ C +G +E+A+ +F ++ GL P+ V Y + +DG
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 706
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--------- 250
K NP A ++ + M P Y +++N K K AL LF EM
Sbjct: 707 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV 766
Query: 251 ----------RSHKCK---------------PNICTYTALVNAFAREGLCEEAEEIFEQL 285
+S K + PN TYT+L++ + G+ EA+ ++ ++
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 286 QGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
Q + P Y +L+ Y I M G EPD+ +Y +M+DAY R G
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 884
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + ++A +E+L+ R P TY + Y +G +E A+ F EM G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +Y + I+G K GN +A +F+ + +TY+++I+ + K A
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+F+E++ PN TY +L++ ++G ++A ++ E++ GI PD+ YN L++
Sbjct: 612 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 671
Query: 303 --------AYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
A L + G P+ +Y MVD Y ++
Sbjct: 672 CKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 709
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE + ++ +A + +L R + TY++L+ +G + +A +F E+++ G
Sbjct: 562 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+A YNS I G K GN KA ++ + M P TY ++I+ KA + A
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF+++ PN TY A+V+ + + A ++ E++ G+ PD + YN ++
Sbjct: 682 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 741
Query: 302 -------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+A L M S+N +++ Y ++G
Sbjct: 742 CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSG 779
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 11/225 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V L+ A+ ++ +++ + + +P Y L+ +C + +E+A
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM + L P+A Y ++IDG K G + A F M P+ YT +I + K
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 570
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A +F + S + ++ TY+ L++ +R G EA IF +LQ G+ P+ + YN
Sbjct: 571 NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYN 630
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+L+ +A +L+ M + G PD +YNI++D +AG
Sbjct: 631 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 675
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLIE + + +A E+ + PT TY++++ C G L+ A+ REM
Sbjct: 386 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 445
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+AVVY + + K G +++ I +RM+ P Y +I + KA + A
Sbjct: 446 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EM + +PN TY A ++ +++ G E A+ F ++ G+ P+V Y AL+E
Sbjct: 506 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 565
Query: 304 Y 304
+
Sbjct: 566 H 566
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +A + EL + +P TY L+ C G ++KA + EM
Sbjct: 596 VLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 655
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V YN IDGL K G ++A +F ++ P+ TY M++ Y K+ A
Sbjct: 656 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 715
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM P+ Y ++N +E E+A ++F+++ G V ++N L+E
Sbjct: 716 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEG 774
Query: 304 Y----RLISRMHMGCE-------PDRASYNIMVDAYGRAGL 333
Y +L H+ E P+ +Y ++D +AG+
Sbjct: 775 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 815
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
KS + A F LE + R +P + Y ++L C EKA +F+EM + G S V
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STV 766
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+N+ I+G K G Q+A + + M P+ TYT +I+ KA A +L+ EM
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ P TYT+L++ + G E +FE++ GIEPD Y +++AY
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY+LL++ +C + +A + EM+K L P+ + Y+ I+GL + G
Sbjct: 371 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 430
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q I + M + +P+ YT ++ + K + + + MR P++ Y
Sbjct: 431 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 490
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
+L+ F + EEA ++ + P+ + Y A ++ Y M +
Sbjct: 491 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 550
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G P+ Y +++ + + G
Sbjct: 551 GVLPNVGIYTALIEGHCKEG 570
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 46/203 (22%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++D +P TY +L+ +CM +A+ + EM GL P + YN+ IDG ++ G+
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A ++ +EM + + N+ +
Sbjct: 327 IEQA-----------------------------------FRIKDEMVACGIEANLIIWNT 351
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+N + G E+A EI +++ G+EPD Y+ L+E A+ L+ M
Sbjct: 352 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 411
Query: 314 CEPDRASYNIMVDAYGRAGLHEG 336
P +Y+++++ R G +G
Sbjct: 412 LAPTVLTYSVIINGLCRCGNLQG 434
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ L++ YC SG L++A + EM + P+ V Y S ID K G +A ++ M
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ +TYT +++ Y LF EM + +P+ TY +++A+ REG
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 886
Query: 276 EEAEEIFEQLQGAGI 290
EA ++ +++ G+
Sbjct: 887 MEACKLKDEILVKGM 901
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y + ++A E+++ + IP TY L+ C +G++ +A+ ++ EM++
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A Y S + G GN + +F+ M +P TY +MI+ Y + A
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890
Query: 245 KLFNEM------RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
KL +E+ + + T + + F G +EA E+ + G
Sbjct: 891 KLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 941
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P++V+++ +D K G +AV +F K +PS + ++ K +K + K+
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREG-----------------LCEEAEEIFEQLQGAG 289
F+ M +HK P++ TYT +++A + G L +EA E+ + G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 290 IEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ PD+Y Y+ L+ + L+ + +G +P+ +YN ++D + R G
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 325
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ +Y G L +A VF + + PS + NS + LLKG + ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--------------RSHKCK- 256
F M P TYT MI+ + K A ++ EM RS K
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 257 --PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
P++ TY L+N F E EA+ + ++ G++P+ YNAL+ +A+
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331
Query: 305 RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
R+ M G E + +N +++ +AG E
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKME 363
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C SG LEKA + M P+ V Y+S + GL K G+ +A+++
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+RM C P+ TYT +I+ A K A L +EM + C P+ +Y AL++ + R
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------------MGCEPDRA 319
G EEA+++F+++ PD Y L+ + SR+ G +PD
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361
Query: 320 SYNIMVDAYGRA 331
+Y+I+V Y RA
Sbjct: 362 TYSIVVAGYSRA 373
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREM-R 181
+++ + L KA E+ D + + P TY+ ++ +C G +++A + REM
Sbjct: 46 VVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVT 105
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ G+ P V Y S +DGL + G +A E+ + MK +P T++ +I + A K
Sbjct: 106 RDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVD 165
Query: 242 MALKLFNE-MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
ALKL+ E + S KP++ TYTAL++ F + G E+A ++ ++G P+V Y++L
Sbjct: 166 EALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 225
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ +A L RM GC P+ +Y ++ +G H+
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI--HGLCAAHK 269
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 103/197 (52%), Gaps = 15/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT T+ +++ +C + L++A A F +MR++ + P+ YN ++GL K KA
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAY 61
Query: 210 EIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVN 267
E+ + M+ P TY+ +IN + K + A ++ EM + P++ TYT++V+
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC--E 315
R+G + A E+ +++ G+EPD + ++AL+ EA +L + +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 316 PDRASYNIMVDAYGRAG 332
PD +Y ++D + ++G
Sbjct: 182 PDVVTYTALIDGFCKSG 198
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY- 183
L++ Y + ++A+ + E+ C+P TY L++ +C + LE+A + M+
Sbjct: 295 LLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 354
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V Y+ + G + +A E Q M P+ TY+ +I+ KA + A
Sbjct: 355 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHA 414
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ M + + +P++ T+ +++ A R G +EA ++ + G+EP + Y L+E
Sbjct: 415 MEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG 474
Query: 304 YRLISRMHMGCE 315
+ RM + E
Sbjct: 475 FSRTGRMEIAYE 486
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++++ Y + +A +EM + P+AV Y+S IDGL K G A+E+
Sbjct: 358 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEV 417
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +PS T+ +I + A KL M +H +P + TYT L+ F+R
Sbjct: 418 LKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 477
Query: 272 EGLCEEAEEIFEQLQ 286
G E A E+FE ++
Sbjct: 478 TGRMEIAYELFEVMR 492
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+++ R P+ T+ ++ A C G +++A + M +GL P V Y + ++G + G
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Query: 205 PQKAVEIFQRMKRDCCQPST-------ETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ A E+F+ M++ + S+ + ++ +I KA + A+ + E+RS +C+P
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 540
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
A+V+ R G EEA ++ + G+
Sbjct: 541 AEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 124 LLIEAYGQ-KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+++ Y + K + AEF E++ P TY+ L+ C +G ++ A V + M
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQ-EMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVN 423
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ PS +NS I L + G+ +A ++ M +P TYT ++ + + + +
Sbjct: 424 KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEI 483
Query: 243 ALKLFNEMR----SHKCKPNIC---TYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
A +LF MR N+ ++AL+ + ++A + E+L+ EP
Sbjct: 484 AYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 540
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 92/156 (58%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ C P TY ++ +Y + G E +AVF M G+ P+ V YN+ + G +
Sbjct: 324 TTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTE 383
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+E F+ +K++ +P +YT ++N YG++++ A ++FNEMR + CKPN +Y AL++
Sbjct: 384 ALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALID 443
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
A+ G+ +EA + +++ GI+PDV + + L+ A
Sbjct: 444 AYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTA 479
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A G KKA ++ ++ P T+ ++L A+ KA A F M+
Sbjct: 229 VINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSK 288
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFM 242
+ P N I L+K G +A+E+F M+ R C P TYT ++ Y ++
Sbjct: 289 VAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAEN 348
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+F+ M + +PNI +Y AL+ A+A G+ EA E F+ L+ G+ PD+ +Y +L+
Sbjct: 349 CKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLN 408
Query: 303 AY----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
AY + + M C+P++ SYN ++DAYG AG+
Sbjct: 409 AYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGM 450
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 110/224 (49%), Gaps = 13/224 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +A + E+ + RC P DTY L+ A+ +G A + +M++
Sbjct: 158 MMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRA 217
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+PPS YN+ I+ GN +KA+E+ ++M + P T+ ++++ + ++ A
Sbjct: 218 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKA 277
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG--AGIEPDVYAYNALM 301
+ F M+S K P+ CT +++ + GL EA E+F ++ PDV Y ++M
Sbjct: 278 IAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIM 337
Query: 302 EAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLH 334
+Y + + + G P+ SYN ++ AY G+H
Sbjct: 338 YSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMH 381
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL AY G+ +A F+ +++ GL P V Y S ++ + P+KA E+
Sbjct: 363 PNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREV 422
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+++ C+P+ +Y +I+ YG A A+ L +EM +P++ + + L+ A R
Sbjct: 423 FNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGR 482
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMG-CEPDRAS 320
+ + I + GI+ + AYN+ + +Y L + M G +PD +
Sbjct: 483 CKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVT 542
Query: 321 YNIMVDAYGRAG 332
YNI++ + G
Sbjct: 543 YNILISGSCKLG 554
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 88 SLPPTHATWDDLINV-------SVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLH 135
++PP+ T++++IN L L KK P ++ + ++ A+ + +
Sbjct: 218 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNI---VLSAFKNGAQY 274
Query: 136 KKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR--KYGLPPSAVVY 192
KA Y E++ S+ P T +++ GL +A +F MR + P V Y
Sbjct: 275 SKA-IAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTY 333
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
S + G + +F M + +P+ +Y ++ Y AL+ F ++
Sbjct: 334 TSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQ 393
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------R 305
+ +P+I +YT+L+NA+ R E+A E+F +++ +P+ +YNAL++AY
Sbjct: 394 NGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKE 453
Query: 306 LISRMHM----GCEPDRASYNIMVDAYGR 330
IS +H G +PD S + ++ A GR
Sbjct: 454 AISLLHEMEQDGIQPDVISISTLLTACGR 482
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 161 LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
+ +Y G +KA ++ MR + P AV YN I G K G ++++ F+ M
Sbjct: 512 IGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNI 571
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+ E Y+ +I Y K K A FN M+ C P++ TYT L+ A++ +G A +
Sbjct: 572 HLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWD 631
Query: 281 IFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDR 318
+F++++ G +PD ++LMEA ++ G +P+R
Sbjct: 632 LFKEMENNGTQPDAIVCSSLMEA------LNKGGQPER 663
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY +H +A T+ L + P +Y LL AY S EKA VF EMRK
Sbjct: 371 LLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNA 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK-------- 236
P+ V YN+ ID G ++A+ + M++D QP + + ++ G+
Sbjct: 431 CKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKID 490
Query: 237 ----ASKSF-----------------------MALKLFNEMRSHKCKPNICTYTALVNAF 269
A+KS AL L+ MR+ KP+ TY L++
Sbjct: 491 IILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGS 550
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPDR 318
+ G E+ + FE + I Y++ L EA + M GC PD
Sbjct: 551 CKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDV 610
Query: 319 ASYNIMVDAYGRAG 332
+Y ++ AY G
Sbjct: 611 LTYTTLIKAYSDDG 624
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 35/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I +Y ++ +A T+ + ++ C P TY L+KAY G +A +F+EM G
Sbjct: 581 VICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNG 640
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------------- 227
P A+V +S ++ L KGG P++ +++ + MK+ Q + + Y
Sbjct: 641 TQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTAS 700
Query: 228 ----------------TL--MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
TL ++N GK ++ +KLF +M + + TYT L+
Sbjct: 701 QIIEHLDSSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNL 760
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + E+ + ++ AG+ P +Y Y +++
Sbjct: 761 LIVGKWRKYVEVLQWMEDAGVCPTLYMYQSVL 792
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+KKA Y + P TY +L+ C G ++ F +M + + VY+S
Sbjct: 521 YKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSS 580
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I +K G +A F MK C P TYT +I Y A LF EM ++
Sbjct: 581 VICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNG 640
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+P+ ++L+ A + G E ++ E ++ I+ + AY
Sbjct: 641 TQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAY 683
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ LL++ +SG L+ A VFR M+ + +Y I + +A +F M
Sbjct: 120 FPLLIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEM 179
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C+P+T+TY +I+ + +A + A+ + ++M+ P+ TY ++NA G
Sbjct: 180 QEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNW 239
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIM 324
++A E+ +++ G+ PD+ +N ++ A++ ++ PD + NI+
Sbjct: 240 KKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIV 299
Query: 325 VDAYGRAGLH 334
+ + GL+
Sbjct: 300 IHCLVKIGLY 309
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
++ + + +RL+KK ++ LL ++ +KAE +E+ + +PT T
Sbjct: 291 ENAVKLVDSMRLSKKASSFTYNPLITALL-----ERGFVRKAEALQMEMENEGIMPTVVT 345
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ E A+ F EMR GL P + YNS ++ K GN ++A+ + ++
Sbjct: 346 YNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLR 405
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R P+ TY +I+ Y + A +L EM C P++CTYT L+N +
Sbjct: 406 RAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLA 465
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMV 325
A E F+++ G++PD +AYN + A +S M G PD +YN+++
Sbjct: 466 MAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVII 525
Query: 326 DAYGRAG 332
D + G
Sbjct: 526 DGLCKTG 532
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V YN IDGL K GN + A + +M D QP TYT +I+ + + A
Sbjct: 513 GIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREA 572
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KL N M S +P++ TYT LV+ R G A F ++ GIEP+ YN L+ A
Sbjct: 573 RKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 632
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ R + G P++ +Y +++D R G
Sbjct: 633 LCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREG 672
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ A+C GLL +A + M GL PS V Y + + GN A F++M
Sbjct: 555 TYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKM 614
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P+ TY ++I+ ++ +A + F+EM PN TYT L++ REG
Sbjct: 615 LDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNW 674
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A ++ ++ GI PD +NAL + +
Sbjct: 675 ADAIRLYFEMHQNGIPPDYCTHNALFKGF 703
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + +A E+++ C P TY +L+ L A F EM G
Sbjct: 419 LIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG 478
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P YN+ I L + A ++ + M P T TY ++I+ K A
Sbjct: 479 LQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 538
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L +M S +P+ TYT L++A GL EA ++ + G++P V Y L+
Sbjct: 539 RLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTC 598
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AY +M +G EP+ +YN+++ A G
Sbjct: 599 CRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTG 637
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 47/234 (20%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG---------------- 184
Y E+L R PT TY LL ++ G ++A + +EM G
Sbjct: 224 VYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISF 283
Query: 185 --------------------LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
S+ YN I LL+ G +KA + M+ + P+
Sbjct: 284 LAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTV 343
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +I+ K ++ A F EMR+ P++ TY +L+N + + G +EA +
Sbjct: 344 VTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGD 403
Query: 285 LQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
L+ AG+ P V YN L++ Y RL M GC PD +Y I+++
Sbjct: 404 LRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNG 457
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C +G L+ A+ + +M GL P + Y I + G ++A ++
Sbjct: 516 PDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKL 575
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M D QPS TYT++++ + + A F +M +PN TY L++A
Sbjct: 576 LNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCM 635
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G A F ++ G+ P+ Y Y L+ +A RL MH G PD +
Sbjct: 636 TGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 695
Query: 321 YNIMVDAYGRAGLHEG 336
+N + + ++
Sbjct: 696 HNALFKGFDEGHMYHA 711
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE--TYT 228
+ AV+ EM + + P+ V YN+ +D LK G +A + + M+ S T+
Sbjct: 219 DDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFN 278
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++I+ + A+KL + MR K K + TY L+ A G +AE + +++
Sbjct: 279 VVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENE 337
Query: 289 GIEPDVYAYNALMEA-----------YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
GI P V YNA++ + MG PD +YN +++ Y +AG
Sbjct: 338 GIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAG 392
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ L ++A ++ P+ TY +L+ C G L A FR+M G
Sbjct: 559 LIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVG 618
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YN I L G A F M P+ TYTL+I+ + A+
Sbjct: 619 IEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAI 678
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+L+ EM + P+ CT+ AL F EG A E E +
Sbjct: 679 RLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENI 718
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 52/250 (20%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LEL+ + C P E +Y L+ +C +E A +F EM GL P+ V Y + I G K
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMIN------------------LYGKASKSF-- 241
A + +RMKR C+P+ +TY ++I+ L K S
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612
Query: 242 ---------------MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+AL++FN+M H C PN+ TY++L+ A +EG EEAEE+F +L+
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Query: 287 GAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G+ PD Y ++E A+ + M + GC+P +Y++++ GL
Sbjct: 673 KQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIK-----GLQN 727
Query: 336 GKCSYSLVEL 345
+ LV L
Sbjct: 728 EMVYHKLVAL 737
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P +Y L++ YC G EKA ++ M K P+ V YN I G G+ A+
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAI 490
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + MK + CQP +YT +I+ + K SK +A +FNEM PN TYTAL++ +
Sbjct: 491 RVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGY 550
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ + A + E+++ +G P+V YN L+
Sbjct: 551 CKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHG 584
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P Y ++ A C G + AE++ ++ K G+ P Y S I G +
Sbjct: 216 YHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR 275
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A EIF RM + C+P+ TY+ +IN + + AL +EM H P + T
Sbjct: 276 NRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--------- 312
+TA + A G E+A +IF ++ G +P+VY Y +L+ R +SRM +
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQR-VSRMAIGLFHRMSRD 394
Query: 313 GCEPDRASYNIMVDA 327
G P+ +YN +++
Sbjct: 395 GVVPNTVTYNALMNV 409
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE ++ S P TY ++ YC + L+ A +F M + G P+A Y++
Sbjct: 245 RDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTL 304
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+GL G +A++ M R P+ T+T I + A K+F +M+ C
Sbjct: 305 INGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGC 364
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--- 312
KPN+ TYT+L++ + + A +F ++ G+ P+ YNALM L+ M +
Sbjct: 365 KPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNV--LMENMEIDSA 419
Query: 313 ----------GCEPDRASYNIMVDAYGRAG 332
GC P+ +SYN ++ Y G
Sbjct: 420 LIVFNMMGKHGCLPNTSSYNELIRGYCTIG 449
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L+ + ++ A VF M K+G P+ YN I G G+ +KA+
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M + P+ TY ++I Y + + +A+++ M+++ C+P+ +YT L++ F
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRA 319
+ E A +F ++ G+ P+ Y AL+ Y R++ RM GC P+
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576
Query: 320 SYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+YN+++ + G V L K P
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISP 608
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 131/313 (41%), Gaps = 29/313 (9%)
Query: 41 GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSL-----PPTHAT 95
G++R F G+ P IL + R D ++ ++ F+ + P AT
Sbjct: 242 GNVRDAESIINKVFKSGMKPDTFTYTSMILGYC-RNRDLDSAFEIFNRMDEEGCEPNAAT 300
Query: 96 WDDLIN-VSVQLRLNKKWDPIVLMSCVSILL--------IEAYGQKSLHKKAEFTYLELL 146
+ LIN + R+N+ D I M+ +L I A + A ++++
Sbjct: 301 YSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMK 360
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
C P TY L+ +S + A +F M + G+ P+ V YN+ ++ L++
Sbjct: 361 KKGCKPNVYTYTSLISGQRVSRM---AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEID 417
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ +F M + C P+T +Y +I Y + A+ + M + P + TY ++
Sbjct: 418 SALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIII 477
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCE 315
+ G + A + E ++ G +PD ++Y L+ + IS+M + G
Sbjct: 478 KGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLC 537
Query: 316 PDRASYNIMVDAY 328
P+ +Y ++ Y
Sbjct: 538 PNEVTYTALISGY 550
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +++ AE +L+ + P TY+ ++ C +G + A +F +M K+
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ Y+S I L + G ++A E+F +K+ P TY MI + + K A
Sbjct: 640 GCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRA 699
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFARE 272
EM + C+P + TY L+ E
Sbjct: 700 FDFLGEMINAGCQPTLQTYDVLIKGLQNE 728
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TYT ++ K + + + ++++ +PN+ Y +++NA ++G +AE I ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+G++PD + Y +++ A+ + +RM GCEP+ A+Y+ +++ +G
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSG 312
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 73/180 (40%), Gaps = 50/180 (27%)
Query: 132 KSLHKKAEFT----YLELLDSRCIPTED--TYALLL----KAYCMSGLLEKAEAVFREMR 181
KS KAE T YL++ R P TY LL K S ++++ + RE
Sbjct: 166 KSCSNKAEMTQALNYLDMFSQRG-PKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILRE-- 222
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
GL P+ ++YNS I+ L K GN + A I K KS
Sbjct: 223 --GLQPNLLIYNSVINALCKDGNVRDAESIIN----------------------KVFKSG 258
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
M KP+ TYT+++ + R + A EIF ++ G EP+ Y+ L+
Sbjct: 259 M-------------KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLI 305
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G ++ A++VF + K+GL P+AV +N+ ++G ++ G+ + + M+
Sbjct: 139 FNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LFNEM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGDLETAFEY 333
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
++ Q D+ T W L PT +++ L+N ++L L++ + M +
Sbjct: 152 IKLAQSVFDAITKW----GLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P V Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY +++ +Y GL++KA +F M P V YNS I+ L K G+ +A
Sbjct: 460 IPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHM 519
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F+ M+ P TY+++I +GK++K MA LF+EM S C PNI TY L++
Sbjct: 520 LFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLE 579
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EEA +++E ++ G+ PD Y+ L
Sbjct: 580 RRGKTEEAHKLYETMKQQGLIPDSITYSIL 609
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 14/258 (5%)
Query: 92 THATWDDLINVSVQL-RLNKKWDPIVLMSCVSIL--LIEAYGQKSLHKKAEFTYLELLDS 148
T++ D++ QL RLN+ D SI L+++ + +A + + +S
Sbjct: 328 TYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNS 387
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
D + +L+ C + +A + M + G+ +YN L K
Sbjct: 388 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 447
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F +MK + P TY +MI+ YG+ A +LF M + CKP++ TY +L+N
Sbjct: 448 SNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINC 507
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
+ G +EA +F+++Q G +PDV+ Y+ L+E + +++ M GC P+
Sbjct: 508 LGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 567
Query: 318 RASYNIMVDAYGRAGLHE 335
+YNI++D R G E
Sbjct: 568 IVTYNILLDCLERRGKTE 585
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 52/301 (17%)
Query: 91 PTHATWDDLINVSVQLRLNKKW----DPIVLMSCVSILL-----IEAYGQKSLHKKAEFT 141
P T+ LI +S + K+ D +V CV L+ IEA G+ + K F
Sbjct: 254 PDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFV 313
Query: 142 YLELLDSRCIPTEDTYAL--------------------------------LLKAYCMSGL 169
+++++ C P + TY++ L+K+ C SG
Sbjct: 314 LSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGH 373
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+A VF M + S ++ L +A+++ M Y +
Sbjct: 374 ASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNM 433
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ + GK + LF++M+++ P++ TY +++++ R GL ++A E+FE ++ +
Sbjct: 434 VFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASS 493
Query: 290 IEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKC 338
+PDV YN+L+ EA+ L M G +PD +Y+I+++ +G++ E C
Sbjct: 494 CKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMAC 553
Query: 339 S 339
S
Sbjct: 554 S 554
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++A+ S + K V+ EMR+ G YN +D L K G +A ++F+ M
Sbjct: 188 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 247
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C P TYT++I + GKA ++ L F+EM S C N+ + ++ A + +
Sbjct: 248 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 307
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ + ++ +P+ + Y+ ++ ++H
Sbjct: 308 DKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 343
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 47/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + +A + ++ C+P TY +L++ +G K + F EM
Sbjct: 226 MLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK 285
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---- 239
G + + +N+ I+ L K K + + +M + CQP+ TY++ +++ +
Sbjct: 286 GCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRL 345
Query: 240 --------SFMALKLFNEMRSHKCKPNICTYTALVNAFAR-----------------EGL 274
FM +++ + CK + N F R E L
Sbjct: 346 NEVLDICSRFMNRSIYSYLVKSLCKSGHASEAH--NVFCRMWNSHEKGDRDAFVSMLEVL 403
Query: 275 CE-----EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDR 318
C EA ++ + GI DV YN + A L +M G PD
Sbjct: 404 CNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDV 463
Query: 319 ASYNIMVDAYGRAGL 333
+YNIM+ +YGR GL
Sbjct: 464 FTYNIMISSYGRVGL 478
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I +YG+ L KA + + S C P TY L+ G L++A +F+EM++
Sbjct: 468 IMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEK 527
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ I+ K + A +F M + C P+ TY ++++ + K+ A
Sbjct: 528 GYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEA 587
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
KL+ M+ P+ TY+ L
Sbjct: 588 HKLYETMKQQGLIPDSITYSIL 609
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+GL S Y + L+ K ++++ M+R + Y ++++ KA
Sbjct: 179 KWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVD 238
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +M+ C P+ TYT L+ + G + F+++ G ++ A+N ++
Sbjct: 239 QAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTII 298
Query: 302 EA-----------YRLISRMHMGCEPDRASYNIMVDAYGRAG-LH 334
EA + L + C+P++ +Y+I +D G LH
Sbjct: 299 EALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 343
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A + E+ + P TY++L++ + S +E A ++F EM G
Sbjct: 504 LINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG 563
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P+ V YN +D L + G ++A ++++ MK+ P + TY+++ L ++ ++
Sbjct: 564 CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRT 619
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ C S +A+ V EM+ G+ P A Y++ I GL K ++A ++
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQM 219
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+RM C P Y+ +I+ + K+ K A K EMR + P++ TY +++ +
Sbjct: 220 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279
Query: 272 EGLCEEAEEIFEQLQGAG-IEPDVYAY----------NALMEAYRLISRM-HMGCEPDRA 319
G EA+ I +Q+Q +G + PDV Y + L+EA +L+ RM GC PD
Sbjct: 280 LGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 339
Query: 320 SYNIMVDAYGRAGLHE 335
+Y ++D + G E
Sbjct: 340 TYTTIIDGLCKCGRLE 355
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ + +A+ T E+ R P TY ++ C G + +A+ + +M++ G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 185 -LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P V Y++ I+GL K +A ++ RM + C P TYT +I+ K + A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L M+ C PN+ TYT L++ + +EAE + E+++ AG P++ YN ++
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 302 --------EAYRLISRMHMG---CEPDRASYNIMVDA 327
EA +L+ RM G C PD A+Y +V+A
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 454
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ A+ + LE+A + EMR+ G PP+ V YN +D L K A
Sbjct: 53 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 112
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M P+ T+ +++ + K A KL M + +PN+ TY+AL++
Sbjct: 113 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
+ EA+E+ E+++ +G+ PD + Y+AL+ EA +++ RM GC PD
Sbjct: 173 CKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 232
Query: 319 ASYNIMVDAYGRAG 332
Y+ ++ A+ ++G
Sbjct: 233 VVYSSIIHAFCKSG 246
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 84 DAFDSLP--PTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
DAF P A DL LR + DP V+ LI A+ + ++A
Sbjct: 24 DAFTHTPIITAMANAGDLDGAMDHLR-SMGCDPNVV---TYTALIAAFARAKKLEEAMKL 79
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
E+ + C P TY +L+ A C ++ A+ V ++M + G P+ + +NS +DG K
Sbjct: 80 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 139
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN A ++ M +P+ TY+ +I+ K+ K A ++ EM++ P+ T
Sbjct: 140 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFT 199
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRMH 311
Y+AL++ + EEAE++ ++ G+G PDV Y++ L+EA + + M
Sbjct: 200 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 259
Query: 312 MGCE-PDRASYNIMVDAYGRAG 332
+ PD +YN ++D + G
Sbjct: 260 KQRKSPDVVTYNTVIDGLCKLG 281
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +A+ E+ S P TY+ L+ C + +E+AE + R M G
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Query: 185 LPPSAVV-----------------------------------YNSYIDGLLKGGNPQKAV 209
P VV YN+ IDGL K G +A
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287
Query: 210 EIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
I +M+ P TY+ +IN K+ A KL + M C P++ TYT +++
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
+ G EEAE + + ++ AG P+V Y L+ EA R++ M + GC P+
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 407
Query: 318 RASYNIMVDAYGRAG 332
+YN MV+ +G
Sbjct: 408 LVTYNTMVNGLCVSG 422
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C +G L A + EM+ G P A + I + G+ A++ + M C P+
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNV 57
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TYT +I + +A K A+KL EMR C PN+ TY LV+A + + A+++ ++
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 285 LQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
+ G P+V +N+L++ + +L+ M G P+ +Y+ ++D
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 171
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C S +L+EA QK L + + + C P TY ++ C G LE+AE + +
Sbjct: 314 CKSDMLVEA--QKLLDR--------MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 363
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ G P+ V Y + I GL K +A + + M+ C P+ TY M+N + +
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 423
Query: 240 SFMALKLFNEMRSHK--CKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
A +L M+ + C P+ TY +VNA L +EAE++ EQ+
Sbjct: 424 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 149 RCIPTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
RC P D TY L+ YC + +E+A VF M + +AV Y + I GL + G
Sbjct: 217 RCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLH 272
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A+E + RM+ D C P+ TYT+++ ++ + AL LF EMR C+PN+ TYT L+
Sbjct: 273 EALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLI 332
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
+ +EG +EA ++ ++ G+ P V +NAL+ +Y +M D
Sbjct: 333 DYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSY--------------CKRGMMED 378
Query: 327 AYGRAGLHEGK 337
A G GL E K
Sbjct: 379 AVGVLGLMESK 389
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E Y L+ YC +G +E A ++F+ M P+++ +N IDGL K G Q A+ + +
Sbjct: 500 EHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVE 559
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M + +P+ TY +++ K A ++ N + S +PN+ TYTA + A+ +G
Sbjct: 560 DMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQG 619
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRASYN 322
EEAEE+ +++ G+ D + YN L+ AY ++ RM GCEP +Y+
Sbjct: 620 RLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYS 679
Query: 323 IM-----VDAYGRAGLHEGKCSYSLVELSV 347
I+ ++ + + G + SL +SV
Sbjct: 680 ILMKHLVIEKHKKEGSNPVGLDVSLTNISV 709
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++S+ P TY L+ C G+++ A +FR M + G P +N+++ L + G
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A +I + +K + + YT +I+ Y KA K A LF M + +C PN T+
Sbjct: 480 RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HM 312
+++ +EG ++A + E + ++P ++ YN L+E A +++R+
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS 599
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ +Y + AY G
Sbjct: 600 GYQPNVVTYTAFIKAYCSQG 619
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
LH+ EF + + + C PT TY +L+ A C SG +A ++F EMR+ G P+ Y
Sbjct: 271 LHEALEF-WARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
ID L K G +A+++ M PS + +I Y K A+ + M S
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESK 389
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---------- 303
K PN+ TY L+ F R + A + ++ + + PDV YN L+
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSA 449
Query: 304 ---YRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYPA 352
+RL+ R G PD+ ++N + R G G+ L L KH A
Sbjct: 450 SRLFRLMIR--DGFSPDQWTFNAFMVCLCRMG-RVGEAHQILESLKEKHVKA 498
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C P TY +L+ C G +++A + EM + G+ PS V +N+ I K G
Sbjct: 315 EMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRG 374
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ AV + M+ P+ TY +I + + A+ L N+M K P++ TY
Sbjct: 375 MMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN 434
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L++ G+ + A +F + G PD + +NA M EA++++ +
Sbjct: 435 TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK 494
Query: 313 GCEPDRASYNIMVDAYGRAG 332
+ + +Y ++D Y +AG
Sbjct: 495 HVKANEHAYTALIDGYCKAG 514
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ C +G L +A + MR+ G P+ Y + L + G +A+ +F M
Sbjct: 257 SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM 316
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C+P+ TYT++I+ K + ALK+ NEM P++ + AL+ ++ + G+
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMM 376
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E+A + ++ + P+V YN L+ A L+++M PD +YN +
Sbjct: 377 EDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTL 436
Query: 325 VDAYGRAGL 333
+ G+
Sbjct: 437 IHGLCEVGV 445
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + + A + +L C+P T+ +++ G ++ A + +M K+
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN ++ +LK + +A EI R+ QP+ TYT I Y + A
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE 625
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ ++++ + Y L+NA+ GL + A + ++ G G EP Y+ LM+
Sbjct: 626 EMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL 685
Query: 305 RLISRMHMGCEP---DRASYNIMVD 326
+ G P D + NI VD
Sbjct: 686 VIEKHKKEGSNPVGLDVSLTNISVD 710
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P +TY+ L+ C G L A +++ MR+ G+ PS +++NS + K G +AV
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT-------- 261
+ M E+Y L+I LF +M K + C+
Sbjct: 795 TLLDSMMECSHLAHLESYKLLI------------CGLFEQMNKEKAEAVFCSLLRCGYNY 842
Query: 262 ----YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ L++ A+ G ++ E+ ++ G Y+ LM+
Sbjct: 843 DEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 105 QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY 164
++ + K + ++L S + LLI AYG L A + + C P+ TY++L+K
Sbjct: 626 EMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMK-- 683
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAV---VYNSYIDG--LLKGGNPQKAVEIFQRMKRDC 219
V + +K G P + + N +D + + +F++M
Sbjct: 684 ---------HLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECG 734
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C P+ TY+ +IN K + +A L++ MR P+ + +L+++ + G+ EA
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLI------------------SRMHMGCEPDRASY 321
+ + + ++ A +E+Y+L+ S + G D ++
Sbjct: 795 TLLDSMMEC-------SHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAW 847
Query: 322 NIMVDAYGRAG 332
+++D + G
Sbjct: 848 KVLIDGLAKTG 858
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
EKAEAVF + + G V + IDGL K G + E+ M+++ C+ ETY+++
Sbjct: 826 EKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSML 885
Query: 231 INLYGKA 237
+ +A
Sbjct: 886 MQELNRA 892
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 45/190 (23%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD---CCQPSTETYTLMINLYGKASKSFMAL 244
S YN + L + + + +++ M D P+ T M+N Y K +A
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR--------------------------EGLCE-- 276
F + + P++ TYT+LV + R GLCE
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAG 269
Query: 277 ---EAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYN 322
EA E + +++ G P V Y L +EA L M GCEP+ +Y
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329
Query: 323 IMVDAYGRAG 332
+++D + G
Sbjct: 330 VLIDYLCKEG 339
>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Brachypodium distachyon]
Length = 502
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 106/194 (54%), Gaps = 17/194 (8%)
Query: 151 IPTEDT--YALLLKAYCMSGLLEKAEAVFREMRKY---GLPPSAVVYNSYIDGLLKGGNP 205
+PT +T Y +L+K Y +G E A V EMR+Y + P+ V Y++ I GL + G
Sbjct: 183 LPTPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKM 242
Query: 206 QKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A E+F+ M ++D P TY ++IN + + + A +F MR ++C+PN Y
Sbjct: 243 KEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYAT 302
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L+N +R+G E +FE+++ AG+EPD +Y AL+ E L+ M G
Sbjct: 303 LMNGHSRKGELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKG 362
Query: 314 CEPDRASYNIMVDA 327
C+ D +YN++++
Sbjct: 363 CKADVVTYNLLIEG 376
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRC---IPTEDTYALLLKAYCMSGLLEKAEA 175
+CV +LI+ Y + + A E+ + C P TY+ L+ C +G +++A
Sbjct: 188 TCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKEAFE 247
Query: 176 VFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F EM K + P + YN I+G + G KA IF M+++ C+P+ Y ++N +
Sbjct: 248 LFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGH 307
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ + +F EM+S +P+ +YTAL+ R G +E ++ +++ G + DV
Sbjct: 308 SRKGELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADV 367
Query: 295 YAYNALMEAY----RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
YN L+E R++ M + G + + ASY I++++ G
Sbjct: 368 VTYNLLIEGLCKDKRMVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCG 416
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 11/218 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + KA + + + C P YA L+ + G LE VF EM+
Sbjct: 267 VIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEEMKSA 326
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P AV Y + I L + G+ + +++ + M+ C+ TY L+I K + A
Sbjct: 327 GVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVEA 386
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L + + N+ +Y ++N+ G E+A + + G G P A N L+
Sbjct: 387 MDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPHYAASNDLLIG 446
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGR 330
+ R+ +G +PD + + +V+A R
Sbjct: 447 LCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCR 484
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKC---KPNICTYTALVNAFAREGLCEEA 278
P+T Y ++I Y K S A ++ +EMR + C +PN+ TY+ L+ R G +EA
Sbjct: 186 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKEA 245
Query: 279 EEIFEQL-QGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMVD 326
E+FE++ + I PD YN ++ + + ++ CEP+ +Y +++
Sbjct: 246 FELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMN 305
Query: 327 AYGRAG 332
+ R G
Sbjct: 306 GHSRKG 311
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ + P E TY+LL+ AY +G E A + +EM G
Sbjct: 310 LLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 369
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G+ QKA + + M QP Y +MI+ +GK + A+
Sbjct: 370 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAM 429
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+FN MR +P++ T+ L++A + G + A E+F++++ + P YN ++
Sbjct: 430 DVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLL 489
Query: 302 -EAYR------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
E R ++S M G P+ +Y +VD YGR+G
Sbjct: 490 GEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSG 528
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A VF MR G+ P V +N+
Sbjct: 391 QKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTL 450
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG A+E+F+ M+ C P T TY +MINL G+ + + +EM+
Sbjct: 451 IDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGL 510
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY
Sbjct: 511 VPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALN 570
Query: 306 LISRMHM-GCEPDRASYNIMVDAYG 329
++ M G E N +++A+G
Sbjct: 571 VVKAMRADGLEASTVVLNSLINAFG 595
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A G +AE +LE L P Y LLK Y G L+ AE V EM +
Sbjct: 274 LISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSEC 333
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G K+
Sbjct: 334 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 393
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM + +P+ Y +++ F + A ++F +++G GIEPDV +N L
Sbjct: 394 FAVLR---EMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTL 450
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYG 329
++A+ L M C P +YNIM++ G
Sbjct: 451 IDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLG 490
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM
Sbjct: 344 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS 403
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A+++F RM+ + +P T+ +I+ + K + A
Sbjct: 404 GVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCA 463
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++LF EMR C P TY ++N + E + +++ G+ P++ Y L++
Sbjct: 464 MELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDV 523
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
Y R G +P Y+ +V+AY + GL
Sbjct: 524 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 564
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G++ E E+ + +P TY L+ Y SG ++A M+
Sbjct: 484 IMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 543
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS +Y++ ++ + G A+ + + M+ D + ST +IN +G+ + A
Sbjct: 544 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEA 603
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ + +P++ TYT L+ A R ++ I+E++ +G PD A L A
Sbjct: 604 FSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSA 663
Query: 304 YR 305
R
Sbjct: 664 LR 665
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC----CQPSTETYTLMINLYG 235
+R++ P Y+ + LL +P A I +R+ D +P ++ +I+ +
Sbjct: 186 IREHNFLPDLASYSHLLASLLNTRDPPDAA-ILERLLGDLRDSRLEPDAPLFSDLISAFA 244
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDV 294
+A+ AL+L ++ P TAL++A G EAE +F + AG I+P
Sbjct: 245 RAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRT 304
Query: 295 YAYNALMEAYRLISRM----HM-------GCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I + H+ G PD A+Y+++VDAY RAG
Sbjct: 305 RAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAG 353
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D+Y +L++ C +G +A + ++ + G+ ++YN+ L K ++F++
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P TY ++I +G+ + A+ +F E+ CKP+I +Y +L+N + G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F+++Q G+ PDV Y+ LME + R+ M GC+P+ +YNI
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 324 MVDAYGRAG 332
++D + G
Sbjct: 588 LLDCLEKNG 596
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 152 PTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P+ D TY +L+ ++ G +++A +F E+ + P + YNS I+ L K G+ +A
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M+ P TY+ ++ +GK + MA LF EM C+PNI TY L++
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ G EA +++ +++ G+ PD Y L
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+AY S KA V+ E+R+ G YN +D L K +KA ++F+ M
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM 261
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+ TYT+MI G+ K A+ LFNEM + N+ Y L+ A+ +
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
++A ++F ++ G P+ Y Y+ L+
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLL 347
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 124/302 (41%), Gaps = 76/302 (25%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAY---------------GQKSLHKKAEFTYLELLDS-- 148
LRL KKWD + + S L++AY ++ HK F Y LLD+
Sbjct: 191 LRLVKKWD-LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALA 249
Query: 149 ---------------RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
C E TY ++++ G ++A +F EM GL + V YN
Sbjct: 250 KDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYN 309
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL------------YGKASKSF 241
+ + L KG KA+++F RM C+P+ TY+L++NL + SK +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY 369
Query: 242 M--------------------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
M A +LF +M S K +Y +++ + G EA E+
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 282 FEQLQGAGIEPDVYAYNALMEA---YRLISRMH--------MGCEPDRASYNIMVDAYGR 330
++ G+ D YN + A + IS +H G PD +YNI++ ++GR
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGR 489
Query: 331 AG 332
G
Sbjct: 490 VG 491
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T+ Y+ L++ G + +A +F +M + + Y S ++ L G +A+E+
Sbjct: 371 TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML 430
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
++ T Y + + GK + LF +M+ P+I TY L+ +F R
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY-RLISRMHMGCEPDRASY 321
G +EA IFE+L+ + +PD+ +YN+L+ EA+ R G PD +Y
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 322 NIMVDAYGRAGLHEGKCSYSLVE 344
+ +++ +G+ + +YSL E
Sbjct: 551 STLMECFGKT--ERVEMAYSLFE 571
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ +A + EL S C P +Y L+ +G +++A F+EM++
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ ++ K + A +F+ M CQP+ TY ++++ K ++ A
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+++M+ P+ TYT L
Sbjct: 602 VDLYSKMKQQGLTPDSITYTVL 623
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 66 AQQIL-RFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVL-MSCVSI 123
AQQ+L R VQ L P T++ LI V R + + +V M +
Sbjct: 49 AQQVLKRMVQ------------AGLSPDTYTFNTLIAAFVARREVRAAEKMVAYMQEHGV 96
Query: 124 L--------LIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
L L++ Y K KAE + P TY L++ Y +G ++ AE
Sbjct: 97 LADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAE 156
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
V MR GL P+++ Y +D + + + A +I RMK++ Q + + +T ++N Y
Sbjct: 157 DVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAY 216
Query: 235 GKASKSFMALKLFNEM---------RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
K A + M S C+PN+ TY+ L+N +AR GL AE + ++
Sbjct: 217 AKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRM 276
Query: 286 QGAGIEPDVYAYNALMEAYR----------LISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
AG P+V + LM AY ++ RM G P+ +YN ++ A R GL
Sbjct: 277 TAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLR 336
Query: 335 EGKC 338
EG+
Sbjct: 337 EGEV 340
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y + AE + PT Y +L+ AY AE + M+K G
Sbjct: 142 LIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEG 201
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------KRDCCQPSTETYTLMINLY 234
+ + V+ + ++ K G+ + A + RM +DC +P+ TY+ ++N+Y
Sbjct: 202 VQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDC-EPNVHTYSTLMNVY 260
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+A + A + M + PN+ T+T L+ A++R G E AE + ++++ AG+ P+V
Sbjct: 261 ARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNV 320
Query: 295 YAYNALMEAYRLISRMHMGCEPDRAS-----YNIMVDAYGRAG 332
YN L+ A + E RA Y+ M + G+ G
Sbjct: 321 LTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGG 363
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+A+ YNS + G+ A ++ +RM + P T T+ +I + + A
Sbjct: 26 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 85
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFA-REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ M+ H ++ TY+ L+ +A +EG +AEE+ E++ G+ P+ Y YN L+E
Sbjct: 86 KMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEG 145
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGR 330
Y ++ RM +G P +Y +++DAY R
Sbjct: 146 YVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTR 183
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 91/155 (58%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C P TY ++ +Y + G +E +AVF M G+ P+ V YN+ + G +A
Sbjct: 325 QCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEA 384
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
IF+ +K++ +P +YT ++N YG++++ A ++FNEMR + CKPN +Y AL++A
Sbjct: 385 FGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDA 444
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G+ +EA + +++ GI PDV + + L+ A
Sbjct: 445 YGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAA 479
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 50/261 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + + + +A + E+ + RC P D Y L+ A+ +GL A + +M +
Sbjct: 158 MMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRA 217
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL------YGKA 237
+PPS YN+ ++ GN +KA+E+ ++M R+ P T+ ++++ Y KA
Sbjct: 218 AIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKA 277
Query: 238 SKSFMALK-----------------------------LFNEMRSHK--CKPNICTYTALV 266
+ F +K L N MR + C P++ TYT+++
Sbjct: 278 TGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSII 337
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM------------GC 314
+++ G E + +F+ + G++P++ +YNAL+ AY MH G
Sbjct: 338 HSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYA-SHGMHTEAFGIFKLLKQNGL 396
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
PD SY +++AYGR+ E
Sbjct: 397 RPDVVSYTTLLNAYGRSAQPE 417
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 88 SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
++PP+ AT+++++N A G KKA +++
Sbjct: 218 AIPPSRATYNNVVN--------------------------ACGAAGNWKKALELCKKMIR 251
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ P T+ ++L A+ KA F M+ + P N I L+K G
Sbjct: 252 NGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGD 311
Query: 208 AVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
AV++ M KR C P TYT +I+ Y + +F+ M + KPNI +Y AL
Sbjct: 312 AVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNAL 371
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG-C 314
+ A+A G+ EA IF+ L+ G+ PDV +Y L+ AY + + M C
Sbjct: 372 LGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSC 431
Query: 315 EPDRASYNIMVDAYGRAGL 333
+P++ SYN ++DAYG AG+
Sbjct: 432 KPNKVSYNALIDAYGSAGM 450
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL AY G+ +A +F+ +++ GL P V Y + ++ + P+KA E+
Sbjct: 363 PNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREV 422
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+++ C+P+ +Y +I+ YG A A+ L +EM P++ + + L+ A R
Sbjct: 423 FNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGR 482
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI-----------SRMHMGCEPDRAS 320
+ + + E + GIE ++ AYN+ + +Y + M PD +
Sbjct: 483 CRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVT 542
Query: 321 YNIMVDAYGRAG 332
YNI++ + G
Sbjct: 543 YNILISGLCKLG 554
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H F +++ ++ C D Y ++++ + +++A +F EM+++ P A +YNS
Sbjct: 135 HAVYVFCWMKNQENYC-ARNDIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNS 193
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I+ + G + A+ I M R PS TY ++N G A AL+L +M +
Sbjct: 194 LINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNG 253
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
P++ T+ +++AF +A FE ++GA I PD + N ++ +A
Sbjct: 254 VGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAV 313
Query: 305 RLISRM---HMGCEPDRASYNIMVDAY 328
L++ M + C PD +Y ++ +Y
Sbjct: 314 DLLNSMREKRVQCSPDVVTYTSIIHSY 340
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ AY +H +A F +LL + P +Y LL AY S EKA VF EMRK
Sbjct: 371 LLGAYASHGMHTEA-FGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKN 429
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V YN+ ID G ++A+ + M++D P + + ++ G+ ++
Sbjct: 430 SCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKI 489
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + + NI Y + + ++ G E+A +++ + + + PD YN L+
Sbjct: 490 DTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILI 547
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%)
Query: 161 LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
+ +Y G EKA ++ M + P AV YN I GL K G ++++ F+ M
Sbjct: 512 IGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRI 571
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+ E Y+ +I Y K K A F M++ C P++ TYTA++ A+ G +
Sbjct: 572 PLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWD 631
Query: 281 IFEQLQGAGIEPDVYAYNALMEA 303
+F++++G I PD ++LMEA
Sbjct: 632 LFKEMEGNAILPDAIICSSLMEA 654
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG + K+A E+ P + + LL A K + V + G
Sbjct: 441 LIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRG 500
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V YNS I L G+ +KA++++ M P TY ++I+ K K +L
Sbjct: 501 IELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESL 560
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K F +M + Y++L+ ++ ++ EAE F ++ +G PDV Y A+++AY
Sbjct: 561 KFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAY 620
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +Y ++ +AE T++ + S C P TY +++AY G +F+EM
Sbjct: 581 LICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNA 640
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------------- 227
+ P A++ +S ++ L KG + +++ + M C Q + + Y
Sbjct: 641 ILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTAS 700
Query: 228 ------------------TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++N GK K+ +KLF +M S + TY L+
Sbjct: 701 EIIEHLDSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSSCSTVGLSTYKVLLRNL 760
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + E+ + ++ AG+ P +Y Y ++
Sbjct: 761 LAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVL 792
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
++KA Y ++ S P TY +L+ C G ++ F +M +P + VY+S
Sbjct: 521 YEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSS 580
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I +K +A F MK C P TYT MI Y LF EM +
Sbjct: 581 LICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNA 640
Query: 255 CKPNICTYTALVNAFAR 271
P+ ++L+ A +
Sbjct: 641 ILPDAIICSSLMEALNK 657
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAV 176
+C ++I + +L+ +A + + + R C P TY ++ +Y + G E +AV
Sbjct: 293 TCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAV 352
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F M G+ P+ V YN+ + G +A+E F+ +K++ +P +YT ++N YG+
Sbjct: 353 FDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGR 412
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
++ A ++FNEMR + CKPN +Y AL++A+ G+ +EA + +++ GI+PDV +
Sbjct: 413 SALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVIS 472
Query: 297 YNALMEA 303
+ L+ A
Sbjct: 473 ISTLLTA 479
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 50/261 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +A + E+ + RC P DTY L+ A+ +G A + +M++
Sbjct: 158 MMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRA 217
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEI-------------------------------- 211
+PPS YN+ I+ GN +KA+E+
Sbjct: 218 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKA 277
Query: 212 ---FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICTYTALV 266
F+ MK P T T ++I+ K + A++LFN MR + C P++ TYT+++
Sbjct: 278 IAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIM 337
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM------------GC 314
+++ G E + +F+ + G+ P++ +YNAL+ AY MH G
Sbjct: 338 YSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAY-ASHGMHTEALETFKLLKQNGF 396
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
+PD SY +++AYGR+ L E
Sbjct: 397 KPDIVSYTSLLNAYGRSALPE 417
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A G KKA ++ ++ P T+ ++L A+ KA A F M+
Sbjct: 229 VINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSK 288
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFM 242
+ P N I L+K +A+E+F M+ R C P TYT ++ Y ++
Sbjct: 289 VAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAEN 348
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+F+ M + +PNI +Y AL+ A+A G+ EA E F+ L+ G +PD+ +Y +L+
Sbjct: 349 CKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLN 408
Query: 303 AY----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
AY + + M C+P++ SYN ++DAYG AG+
Sbjct: 409 AYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGM 450
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 32/270 (11%)
Query: 88 SLPPTHATWDDLINV-------SVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLH 135
++PP+ T++++IN L L KK P ++ + ++ A+ + +
Sbjct: 218 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNI---VLSAFKNGAQY 274
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGL--PPSAVV 191
KA Y E++ S + DT + + +C+ + EA+ F MR+ PP V
Sbjct: 275 SKA-IAYFEIMKSSKV-APDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVT 332
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y S + G + +F M + +P+ +Y ++ Y AL+ F ++
Sbjct: 333 YTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLK 392
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
+ KP+I +YT+L+NA+ R L E+A E+F +++ +P+ +YNAL++AY
Sbjct: 393 QNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLK 452
Query: 305 RLISRMHM----GCEPDRASYNIMVDAYGR 330
IS +H G +PD S + ++ A GR
Sbjct: 453 EAISLLHEMEQDGIQPDVISISTLLTACGR 482
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY +H +A T+ L + P +Y LL AY S L EKA VF EMRK
Sbjct: 371 LLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNA 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ ID G ++A+ + M++D QP + + ++ G+ +
Sbjct: 431 CKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCRQPTKIG 490
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ +S + N Y + + ++ G ++A E++ ++ ++PD YN L+
Sbjct: 491 IILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAVTYNILI 547
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 133/309 (43%), Gaps = 28/309 (9%)
Query: 44 RGKGWKYGSGFVDGIFPVLSPTAQQILRF----VQREVDSNTIWDAFDSLPPTHATWDDL 99
RG+ W VDG+ P A+ LR QR+ + + +LPP A D
Sbjct: 50 RGRRWVRTE--VDGVRAASLP-ARHRLRVEGNRWQRDWKVSEVAARVLALPPADAHAVDA 106
Query: 100 INVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL 159
+ R ++ P+++ + I + ++H F ++++ ++ C D Y +
Sbjct: 107 VLNCWAGRFARRNFPLLIRE----ITISGSLKHAVHV---FRWMKIQENYC-ARNDIYGM 158
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+++ + +++A +F EM+++ P YNS I + G + A+ I M+R
Sbjct: 159 MIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAA 218
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
PS TY +IN G A AL+L +M + P++ T+ +++AF +A
Sbjct: 219 IPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAI 278
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM---HMGCEPDRASYNIMVD 326
FE ++ + + PD N ++ EA L + M C PD +Y ++
Sbjct: 279 AYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMY 338
Query: 327 AYGRAGLHE 335
+Y G E
Sbjct: 339 SYSVCGQAE 347
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AYG+ +L +KA + E+ + C P + +Y L+ AY +G+L++A ++ EM + G
Sbjct: 406 LLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDG 465
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + ++ + + P K I K Q +T Y I Y AL
Sbjct: 466 IQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKAL 525
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREG 273
+L+ MR+ KP+ TY L++ + G
Sbjct: 526 ELYTSMRTGNVKPDAVTYNILISGSCKLG 554
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T+ +++ C +G L KA V ++MR +GL PS V YN+ IDG K G K +
Sbjct: 186 PDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHV 245
Query: 212 ---FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ M + P+ T+ ++IN Y K S A+K+F EMR H N+ TYT+LV+
Sbjct: 246 DMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSG 305
Query: 269 FAREGLCEEAEEIFEQLQGAGIE--PDVYAY-------NALMEAYRLISRM-HMGCEPDR 318
REG E++ ++ E+++ G+ P + + ++EA + M G +P+
Sbjct: 306 LCREGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNV 365
Query: 319 ASYNIMVDAYGRAG 332
+YN ++D Y R G
Sbjct: 366 VTYNTLIDGYQRLG 379
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 47/231 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+ YC + A VF EMR++G+P + V Y S + GL + G + ++++
Sbjct: 259 PNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKL 318
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ + + T ++N + K A + M KPN+ TY L++ + R
Sbjct: 319 VEEME-ELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQR 377
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM------------------------------ 301
G +EA + G GI PDV YN L+
Sbjct: 378 LGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVT 437
Query: 302 ---------------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
+A +L+ M +G EP +YN +++ + G +G
Sbjct: 438 YNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKG 488
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E L +PT ++ +L +C G++ +AE M + G+ P+ V YN+ IDG +
Sbjct: 322 MEELGLATLPTLNS---VLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRL 378
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G ++A M P +TY +I + ++ L +EM+ K ++ TY
Sbjct: 379 GKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTY 438
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L+ A +G +A ++ +++ G+EP YNA++ +
Sbjct: 439 NVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGF 480
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + K+A + P TY L+ + S + EM++ G
Sbjct: 371 LIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETG 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN I L G +KAV++ M +P TY +IN + + + A
Sbjct: 431 VKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAH 490
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ M K + N+ T + F + G +EA + ++ G+ P+ Y
Sbjct: 491 DIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITY 543
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 11/184 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ Y G +++A A M G+ P YN I G + + +
Sbjct: 363 PNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGL 422
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
MK + TY ++I + A+KL +EM +P TY A++N F
Sbjct: 423 LDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCE 482
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
+G + A +I +++ +V N ++ + + +M G P+R +
Sbjct: 483 KGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRIT 542
Query: 321 YNIM 324
Y I+
Sbjct: 543 YEII 546
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ A C G + KA + EM + GL P YN+ I+G + G+ + A +I RM
Sbjct: 437 TYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRM 496
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
++ + + T + + + K K A + NEM PN TY + + +G
Sbjct: 497 EKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG 554
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 29/232 (12%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY Q+ L ++AE T ++LD + + YA L+ AY +GL + + M+ G
Sbjct: 256 LVHAYAQEGLWEEAEKTLSDMLDVGIV-DDRPYAALVAAYGKAGLTDNVNKILETMKASG 314
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ S +YN+ I+ K P+KA + Q M+ D CQ TYT ++ Y + + MA
Sbjct: 315 VEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAE 374
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM+ +P +Y L++A+ R G +AE I +Q A +P V YN ++ Y
Sbjct: 375 SMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGY 434
Query: 305 ----------RLISRM------------------HMGCEPDRASYNIMVDAY 328
R+ M +GC+P+ +Y I++ AY
Sbjct: 435 ASAKMRSQAERMFQTMQDCGLRPDAAEDCYIRMQQLGCKPNAVTYKILLKAY 486
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY------CM-SGLLEKAEAVFREMRKYG 184
+S +A FT ++ S +D+ +K Y C+ G + A +F+ G
Sbjct: 116 RSWGSRAAFTIVQATSSSDYLEDDSQLNSVKDYNSALLNCVKDGRMRDAMTIFKRFEGAG 175
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y + I G K + K ++F RM+R+ C P + T++I+ YG +A
Sbjct: 176 LKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAE 235
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +P+ YTALV+A+A+EGL EEAE+ + GI D Y AL+ AY
Sbjct: 236 SAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RPYAALVAAY 294
Query: 305 ----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+++ M G E YN +++ + +A E
Sbjct: 295 GKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPE 336
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 45/255 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+ + K + + +RC P +L+ Y GL AE+ + + G
Sbjct: 186 LIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQG 245
Query: 185 LPPSAVVYNSYI-----DGLL-----------------------------KGGNPQKAVE 210
L P A+ Y + + +GL K G +
Sbjct: 246 LQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDDRPYAALVAAYGKAGLTDNVNK 305
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + MK + ST Y +IN++ KA A + M++ C+ + TYT+++ A++
Sbjct: 306 ILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYS 365
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDRA 319
R AE + +++ AGI+P +Y L+ AY R++ M C+P
Sbjct: 366 RNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVE 425
Query: 320 SYNIMVDAYGRAGLH 334
YN+M+ Y A +
Sbjct: 426 IYNMMISGYASAKMR 440
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 133 SLHKKAEF-----TYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
++H KAE L+L+ + C E TY +++AY + AE++ EM++ G+
Sbjct: 327 NIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQ 386
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P V Y I + G A I + M+ C+P+ E Y +MI+ Y A A ++
Sbjct: 387 PGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERM 446
Query: 247 FN-----------------EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
F M+ CKPN TY L+ A+ +AE I ++ AG
Sbjct: 447 FQTMQDCGLRPDAAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKAG 506
Query: 290 I 290
I
Sbjct: 507 I 507
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++EAY + AE E+ + P +Y +L+ AYC +G L AE + R M+
Sbjct: 360 VMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAK 419
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK---------RDC--------CQPSTETY 227
P+ +YN I G +A +FQ M+ DC C+P+ TY
Sbjct: 420 CKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAAEDCYIRMQQLGCKPNAVTY 479
Query: 228 TLMINLYGKASKSFMALKLFNEMR 251
+++ Y + S A ++ +MR
Sbjct: 480 KILLKAYTDYNNSIDAERIRLDMR 503
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 66 AQQIL-RFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVL-MSCVSI 123
AQQ+L R VQ L P T++ LI V R + + +V M +
Sbjct: 42 AQQVLKRMVQ------------AGLSPDTYTFNTLIAAFVARREVRAAEKMVAYMQEHGV 89
Query: 124 L--------LIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
L L++ Y K KAE + P TY L++ Y +G ++ AE
Sbjct: 90 LADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAE 149
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
V MR GL P+++ Y +D + + + A +I RMK++ Q + + +T ++N Y
Sbjct: 150 DVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAY 209
Query: 235 GKASKSFMALKLFNEM---------RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
K A + M S C+PN+ TY+ L+N +AR GL AE + ++
Sbjct: 210 AKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRM 269
Query: 286 QGAGIEPDVYAYNALMEAYR----------LISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
AG P+V + LM AY ++ RM G P+ +YN ++ A R GL
Sbjct: 270 TAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLR 329
Query: 335 EGKC 338
EG+
Sbjct: 330 EGEV 333
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y + AE + PT Y +L+ AY AE + M+K G
Sbjct: 135 LIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEG 194
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM----------KRDCCQPSTETYTLMINLY 234
+ + V+ + ++ K G+ + A + RM +DC +P+ TY+ ++N+Y
Sbjct: 195 VQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDC-EPNVHTYSTLMNVY 253
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+A + A + M + PN+ T+T L+ A++R G E AE + ++++ AG+ P+V
Sbjct: 254 ARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNV 313
Query: 295 YAYNALMEAYRLISRMHMGCEPDRAS-----YNIMVDAYGRAG 332
YN L+ A + E RA Y+ M + G+ G
Sbjct: 314 LTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGG 356
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+A+ YNS + G+ A ++ +RM + P T T+ +I + + A
Sbjct: 19 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 78
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFA-REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ M+ H ++ TY+ L+ +A +EG +AEE+ E++ G+ P+ Y YN L+E
Sbjct: 79 KMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEG 138
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGR 330
Y ++ RM +G P +Y +++DAY R
Sbjct: 139 YVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTR 176
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C+P T+ ++ YC +G LE A AV+ +M G+ P+ V YN I+G K G+
Sbjct: 313 DGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLG 372
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AVE++Q+M R C P T++ +I+ Y + + AL+++++M H+ +PN+ T++ ++
Sbjct: 373 SAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIII 432
Query: 267 NAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAY---------RLISR--MHMGC 314
++ ++ +EA + +L I P + YN +++ LI + GC
Sbjct: 433 HSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGC 492
Query: 315 EPDRASYNIMVDAY 328
PD+ +Y I++ Y
Sbjct: 493 RPDKYTYTILIIGY 506
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + A Y +++ S +P TY +L+ Y G L A V+++M +
Sbjct: 326 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 385
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP V ++S IDG + G A+ I+ M + QP+ T++++I+ K ++S A+
Sbjct: 386 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 445
Query: 245 KLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L NE+ P Y +++ + G +EA I + ++ G PD Y Y L+
Sbjct: 446 RLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 505
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
Y + SR+ GC PD + N + +AG+
Sbjct: 506 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 157 YALLLKAYCMSGLLEKAEAVF-REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y L+ + G + A+F R ++ P +N I G+ + G QKA+E+ +RM
Sbjct: 216 YNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERM 275
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGL 274
C P T T+ ++++ + ++ ++ + R C PN+ T+T++++ + + G
Sbjct: 276 NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGK 335
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHMGCEPDRASY 321
E+A ++ + +GI P+ YN L+ E Y+ ++R+ C PD ++
Sbjct: 336 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR--CPPDVVTF 393
Query: 322 NIMVDAYGRAG 332
+ ++D Y R G
Sbjct: 394 SSLIDGYCRCG 404
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A Y ++ RC P T++ L+ YC G L+ A ++ +M ++
Sbjct: 360 VLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 419
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFM 242
+ P+ ++ I L K +A+ + + R P Y +I++ K K
Sbjct: 420 RIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 479
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A + M C+P+ TYT L+ + + EA F ++ AG PD N +
Sbjct: 480 ANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 539
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L+ + + LL+ + + + ++G A YN + L+ G V +
Sbjct: 176 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 235
Query: 212 FQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F+R +D P ++ ++I + + AL+L M C P+ T+ +V+
Sbjct: 236 FERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLC 295
Query: 271 REGLCEEAEEIFEQLQGAGI-EPDVYAYNALMEAY----RLISRMHM-------GCEPDR 318
R E+ +LQ G+ P+V + +++ Y +L M + G P+
Sbjct: 296 RTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNT 355
Query: 319 ASYNIMVDAYGRAG 332
+YN++++ YG+ G
Sbjct: 356 VTYNVLINGYGKVG 369
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++ + PT TY +++ G +E A +F EM+ GL P V YNS IDG K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G V F+ MK C+P TY +IN + K+ K L+ + EM+ KPN+ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y+ LV+AF +E + ++A + + ++ G P+ + Y +L+ +A+RL + M
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300
Query: 311 HMGCEPDRASYNIMVDA 327
+G E + +Y ++D
Sbjct: 301 EVGVEWNVVTYTALIDG 317
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ YG+ + + E+ C P TY L+ +C SG L K +REM++ G
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG 233
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ +D K Q+A++ + M+R P+ TYT +++ K A
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAF 293
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L NEM + N+ TYTAL++ +EAE++F ++ AG+ P++ +YNAL+ +
Sbjct: 294 RLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGF 353
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P + LL + G + + F++M G P+ YN ID + K G+ + A
Sbjct: 93 RVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAA 152
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ MK P T TY MI+ YGK + + F EM+S C+P++ TY +L+N
Sbjct: 153 RGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINC 212
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPD 317
F + G + E + +++ +G++P+V +Y+ L++A+ + +G P+
Sbjct: 213 FCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPN 272
Query: 318 RASYNIMVDAYGRAG 332
+Y +VDA + G
Sbjct: 273 EFTYTSLVDANCKIG 287
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ ++ + ++A Y+++ +P E TY L+ A C G L A + EM + G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + IDGL ++A ++F +M P+ +Y +I+ + KA AL
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L NE++ +P++ Y + E A+ + ++Q GI+ + Y LM+AY
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
L + +W+ + + LI+ K+AE + +++ + IP +Y L+ +
Sbjct: 300 LEVGVEWNVVTYTA-----LIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
+ +++A + E++ G+ P ++Y ++I GL + A + M+ + + +T
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
YT +++ Y K+ L L EM+ + + T+ L++ + L +A + F ++
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRM 474
Query: 286 QGA-GIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++P+ Y A+++ A L +M G PDR +Y ++D + G
Sbjct: 475 SNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQG 533
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
T+ +L+ C + L+ KA F M +GL P+A VY + IDGL K + A +F++
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQ 509
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M ++ P YT +++ K AL L ++M K ++ YT+LV F++
Sbjct: 510 MAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQ 569
Query: 275 CEEAEEIFEQLQGAGIEPD-VYAYNALMEAYRL 306
++A E++ G I PD V L + Y L
Sbjct: 570 LQKARSFLEEMIGEEILPDEVLCIGVLKKHYEL 602
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C P + + ++ A + F++M+ + P + L++ FA+ G +
Sbjct: 56 RNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 115
Query: 277 EAEEIFEQLQGAGIEPDVYAYNAL---------MEAYR-LISRMHM-GCEPDRASYNIMV 325
+ F+ + GAG +P V+ YN + +EA R L M G PD +YN M+
Sbjct: 116 GVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMI 175
Query: 326 DAYGRAG 332
D YG+ G
Sbjct: 176 DGYGKVG 182
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y + + A + + ++D +P++ TY + + C G +A+ + ++ +
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + YNS +DG +K G+ A+ ++ M P+ TYT +IN + K + + +A
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LK+ NEMR+ + +I Y AL++ F ++ E A +F +L G+ P+ YN+L+
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG 707
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
YR ++ M G D +Y ++D + G
Sbjct: 708 YRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEG 747
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ +C +E A +F E+ GL P++V+YNS I G N + A+ + +RM
Sbjct: 666 YGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +TYT +I+ K + +AL L++EM + P+I YT L+N +G E
Sbjct: 726 GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A++I +++ I P+V YNAL+ EA+RL + M G P+ +Y+I++
Sbjct: 786 NAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845
Query: 326 DAYGRAG 332
+ + G
Sbjct: 846 NGKIKGG 852
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 136 KKAEFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
K +E T L ++LD PT+ +Y ++ +C G L+ A +VF +M GL P+ + Y+
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS 527
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+DG K G+ + A +F RM + PS TY + IN K ++ A + +
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------R 305
P TY ++++ F +EG A + ++ +G+ P+V Y L+ +
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647
Query: 306 LISRMHM---GCEPDRASYNIMVDAY 328
L R M G E D A+Y ++D +
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGF 673
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL C G + +A ++++M GL P+ V YNS I G + GN A +F M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P+ TY+++++ Y K + A +F+ M P+ TY +N + G
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHM---GCEPDRASYNIM 324
EA+++ ++ G P YN++M+ + L + M G P+ +Y +
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634
Query: 325 VDAY 328
++ +
Sbjct: 635 INGF 638
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K YC L A F +M + G P+ V Y I+ K GN KA +++ +MK
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P+ +I + K A KLF+E + NI TY +L++ +EG EA
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEAT 473
Query: 280 EIFEQLQGAGIEPDVYAYNAL-----------MEAYRLISRMHMGCEPDRASYNIMVDAY 328
+++++ G+ P +YN++ M A + G +P+ +Y+I++D Y
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533
Query: 329 GRAGLHE 335
+ G E
Sbjct: 534 FKNGDTE 540
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K + A + + ELLD P Y L+ Y +E A + + M G
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN-LYGKASKSFMA 243
+ Y + IDGLLK G A++++ M P YT++IN L GK A
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE-NA 787
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM PN+ Y AL+ + G +EA + ++ G+ P+ Y+ L+
Sbjct: 788 QKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+++++A+C + +E A + ++MR G PS + S I +K GN +A+ + M
Sbjct: 282 YSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMV 341
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
Q + T ++ Y K K AL+ F++M + PN TY L+ + G
Sbjct: 342 SCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMA 401
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A +++ Q++ I P V+ N+L+ +
Sbjct: 402 KAYDLYTQMKNKNICPTVFIVNSLIRGF 429
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++ D +P+E T+ ++ A G + +A + EM G+ + VV + + G K
Sbjct: 304 DMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQD 363
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E F +M + P+ TY ++I K A L+ +M++ P +
Sbjct: 364 KLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVN 423
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
+L+ F + EEA ++F++ I +++ YN+L+ EA L +M
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDK 482
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G P + SYN M+ + R G
Sbjct: 483 GLAPTKVSYNSMILGHCRQG 502
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ G L A ++ EM G+ P ++Y I+GL G + A +I M
Sbjct: 735 TYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEM 794
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
+RD P+ Y +I + KA A +L NEM PN TY L+N + G
Sbjct: 795 ERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ IP Y +L+ C G LE A+ + EM + + P+ +YN+ I G K
Sbjct: 756 YSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFK 815
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK------ASKSFMALKL 246
GN Q+A + M P+ TY ++IN GK A KS ++LK
Sbjct: 816 AGNLQEAFRLHNEMLDKGLTPNDTTYDILIN--GKIKGGNSALKSLLSLKF 864
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +Y + + A + L++S +P LL A + ++ +A V+ +M G
Sbjct: 180 LLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKG 239
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + + LK N ++A + F K + Y+++I + K +A
Sbjct: 240 VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELAC 299
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +MR P+ T+T+++ A ++G EA + +++ G++ +V L++ Y
Sbjct: 300 GLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359
Query: 305 ----RLISRMHM-------GCEPDRASYNIMVD 326
+L+S + G P+R +Y ++++
Sbjct: 360 CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIE 392
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIF-QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+ N +I G G P V+ F KR Y ++N Y KA+K A+ FN
Sbjct: 141 LLNRFISGD-SGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNR 199
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR---- 305
+ P I L+ A + + EA E++E++ G+ D + + +M A
Sbjct: 200 LVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNN 259
Query: 306 -------LISRMHMGCEPDRASYNIMVDAY 328
+ G + D A+Y+I++ A+
Sbjct: 260 EEEAKKFFLEAKSRGVKLDAAAYSIVIQAF 289
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ------------LRLNKKWD 113
+ L ++Q+E I D F+ P T++ +N Q + + + D
Sbjct: 175 VEDALGYIQQE-----IADGFE---PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P V + + + GQ ++A+ +++D C+P T+ L+ A C LE+A
Sbjct: 227 PDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ R++ G+ P +N I+ L K G+P A+ +F+ MK C P TY +I+
Sbjct: 284 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 343
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K AL L +M S C + TY +++ ++ EEAEE+F+Q+ GI +
Sbjct: 344 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 403
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+N L+ +A+ LI++M G +P+ +YN ++ Y + G
Sbjct: 404 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 453
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ C T+ T +L+ YC G +E A ++ G P + YN++++GL + +
Sbjct: 150 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 209
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ M ++ P TY +++N K + A + N+M C P+I T+
Sbjct: 210 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ A EEA ++ Q+ G+ PDVY +N L+ A RL M + G
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329
Query: 314 CEPDRASYNIMVD 326
C PD +YN ++D
Sbjct: 330 CTPDEVTYNTLID 342
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ +S C P E TY L+ C G L KA + ++M G P S + YN+ IDGL K
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M + T+ +I+ K K A +L N+M S +PN T
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y +++ + ++G ++A +I E + G E DV Y L+ A +++ M
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501
Query: 312 M-GCEPDRASYNIMVDAYGR 330
+ G P +YN ++ + R
Sbjct: 502 IKGMRPTPKAYNPVLQSLFR 521
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
DLI +Q + D +V +++L+ + S K E Y E+ P T+
Sbjct: 38 DLILNQLQPLFGIQADTVVYNHLLNVLV-----EGSKMKLLESVYSEMGARGIKPDVVTF 92
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
L+KA C + + A + EM G+ P + + + G ++ G+ + A+ + RM
Sbjct: 93 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
C + T ++IN Y K + AL + + +P+ TY VN +
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 212
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVD 326
A ++ + + G +PDV+ YN ++ EA ++++M GC PD ++N ++
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272
Query: 327 A 327
A
Sbjct: 273 A 273
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ C ++ A + +M GL P+ + YNS + K G+ +KA +I + M
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +IN KA ++ +ALK+ MR +P Y ++ + R
Sbjct: 466 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 525
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+A +F ++ G PD Y + +R + R G P + +++ M++ + + E
Sbjct: 526 RDALSLFREMAEVGEPPDALTYKIV---FRGLCR---GGGPIKEAFDFMLEMVDKGFIPE 579
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF--QRMKRDCCQPSTETYTLMINLYGK 236
EMR+ G V +S++D AV++ Q Q T Y ++N+ +
Sbjct: 7 EMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVE 66
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
SK + +++EM + KP++ T+ L+ A R A + E++ G+ PD
Sbjct: 67 GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETT 126
Query: 297 YNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+ LM+ + R+ +RM MGC + + N++++ Y + G E Y E+
Sbjct: 127 FTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 186
Query: 346 SVKHYP 351
+ P
Sbjct: 187 ADGFEP 192
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L YC G ++KA + M G V Y + I+GL K G Q A+++
Sbjct: 437 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 496
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +P+ + Y ++ + + AL LF EM P+ TY + R
Sbjct: 497 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 556
Query: 272 -EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G +EA + ++ G P+ ++ L E
Sbjct: 557 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H +E ++ C E T+ +L+ C +GL+ A VF +M +Y P V Y+S
Sbjct: 411 HDASELIA-QMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSS 469
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
++G + G + A+++F+ M C+P +Y ++ +A++ A +L EM
Sbjct: 470 LLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKD 526
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--- 311
C PN T+ L+N+ ++GL + A E+ EQ+ G PD++ YNAL+ + R+
Sbjct: 527 CPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDAL 586
Query: 312 -----MGCEPDRASYNIMVDAYGRA 331
M C+PD SYN + RA
Sbjct: 587 KLLSTMSCKPDAISYNSTLKGLCRA 611
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 103/194 (53%), Gaps = 15/194 (7%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+RC P E T+A ++++C +GLL++A + +M +YG P V+Y++ I+G + G+ +
Sbjct: 219 NRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQ 278
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+++ M C+P+T Y + A + +L EM C PN T++ L++
Sbjct: 279 ALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLIS 335
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPD 317
+ + L + A E+ EQ++ G EPD YN ++ +A RL++ M C+PD
Sbjct: 336 SLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLN--SMVCKPD 393
Query: 318 RASYNIMVDAYGRA 331
+N ++ + RA
Sbjct: 394 ALGFNAVLKGFCRA 407
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 46/233 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P E T+++L+ + C + L++ A V +M KYG P V YN I+ L + G
Sbjct: 317 EMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG 376
Query: 204 NPQKAV--------------------------------EIFQRMKRDCCQPSTETYTLMI 231
A+ E+ +M RD C T+ ++I
Sbjct: 377 RVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILI 436
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ + A ++F +M ++C P+I TY++L+N F+ +GL E A ++F + +
Sbjct: 437 DTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CK 493
Query: 292 PDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
PD+++YNA++ +A LI+ M C P+ ++NI++++ + GL
Sbjct: 494 PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGL 546
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Q L A + ++ RC P TY+ LL + GL+E A +FR M
Sbjct: 434 ILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM--- 490
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P YN+ + GL + + A E+ M C P+ T+ ++IN + A
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+++ +M ++ P+I TY AL+N F+ +G ++A ++ + +PD +YN+ +
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKG 607
Query: 302 --------EAYRLISRM-HMGCEPDRASY 321
+A L++ M C P+ ++
Sbjct: 608 LCRAERWQDAEELVAEMLRNKCTPNEVTF 636
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 16/238 (6%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+RL+KK ++ LL + KK LE+ + +PT TY ++
Sbjct: 267 MRLSKKASSFTYNPLITGLL-----ARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 321
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
SGL+E A+ F EMR GL P + YNS ++G K GN ++A+ +F ++R P+
Sbjct: 322 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 381
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY + I+ Y + A L EM C PN+CTYT L+ A E F+++
Sbjct: 382 TYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM 441
Query: 286 QGAGIEPDVYAYNALMEAYRL---ISR--------MHMGCEPDRASYNIMVDAYGRAG 332
G++PD +AYN + A + I+R M G D +YNI++ + G
Sbjct: 442 LSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTG 499
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I+ Y + ++A E+ + C+P TY +L+K L A F EM GL
Sbjct: 387 IDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGL 446
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P YN+ I L G+ +A+E+ + + + T TY ++I+ K A +
Sbjct: 447 QPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKE 506
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
L +M S+ +P+ TYT L++A GL EA +IF + G+ P + ++ AY
Sbjct: 507 LQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYC 566
Query: 305 ---RLIS-------RMHMGCEPDRASYNIMVDAYGRAG 332
L S + G EP+ +YN+++ A R G
Sbjct: 567 RRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 604
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RKYGLPPSAVVYNSYIDGLLK 201
E+L P+ TY LL ++ G +K + +EM R G P+ V YN I GL +
Sbjct: 194 EMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 253
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMIN--LYGKASKSFMALKLFNEMRSHKCKPNI 259
G+ ++A E+ + M R + S+ TY +I L K L+L EM + P +
Sbjct: 254 KGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQL--EMENEGIMPTV 310
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------- 310
TY A+++ + GL E A+ F +++ G+ PDV YN+L+ Y +
Sbjct: 311 VTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD 370
Query: 311 --HMGCEPDRASYNIMVDAYGRAG 332
G P +YNI +D Y R G
Sbjct: 371 LRRAGLAPTVLTYNIRIDGYCRLG 394
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + K A+ ++++ + P TY L+ A+C GLL +A +F M
Sbjct: 490 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PSAV + I + GN A F++M + +P+ TY ++I+ + ++ +A
Sbjct: 550 GLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 609
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
F+EM N TYT L++ + G E+A + ++ GI PD + AL++
Sbjct: 610 SHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKG 669
Query: 304 Y 304
+
Sbjct: 670 F 670
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C +G L+ A+ + +M GL P + Y I + G ++A +IF M
Sbjct: 487 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 546
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D PS T+T++I+ Y + + A F +M +PN TY L++A R G
Sbjct: 547 ISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRT 606
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
+ A F ++ G+ + Y Y L+ +A R MH G PD ++ +
Sbjct: 607 QLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKAL 666
Query: 325 VDAY 328
V +
Sbjct: 667 VKGF 670
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 76/206 (36%), Gaps = 49/206 (23%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ FREM +G+ P N + L + + M + +PS TY +++ +
Sbjct: 155 SAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSF 214
Query: 235 ---GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE-------- 283
G+ K M LK E R C PN TY ++ R+G EEA E+ E
Sbjct: 215 LKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273
Query: 284 --------------------------QLQGAGIEPDVYAYNALMEAY-----------RL 306
+++ GI P V YNA++ +
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
MG PD +YN +++ Y +AG
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAG 359
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 240 SFMALKLFNEMRSHKCKPNI--CTYT--ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
S + L F EM SH P++ C + AL +A + +C EE+ + GIEP +
Sbjct: 150 STLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQ----LGIEPSIV 205
Query: 296 AYNALMEAY----------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
YN L++++ L+ M GC P+ +YN+++ R G
Sbjct: 206 TYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKG 255
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A ++ L +AE + + + +P TY+ L++ + LEK + +EM G
Sbjct: 16 LLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGG 75
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN ++ + G+ ++A+ +F++M+ C P+ TY++++NLYG+ +
Sbjct: 76 SFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVR 135
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF EM+ +PN TY L+N F G +E +F + +EP++ Y L+
Sbjct: 136 DLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFAC 195
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
+A +++ M+ G P +Y +++AYG+A L+E
Sbjct: 196 GKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYE 237
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ + +LE+ S P TY +L+ + G ++ +F +M +
Sbjct: 120 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 179
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ Y I KGG + A +I M PS++ YT +I YG+A+ A
Sbjct: 180 NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEA 239
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L FN M KP + TY +L+ FA+ GL +E+E I ++ +G+ + +N ++EA
Sbjct: 240 LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEA 299
Query: 304 YRLISRMHMG-----------CEPDRASYNIMVDAYGRAGLHE 335
+R + C+PD + ++ Y AGL E
Sbjct: 300 FRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVE 342
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 11/191 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL A GL ++AE VFR M + G+ P Y+ ++ K +K E+ + M
Sbjct: 12 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 71
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P +Y +++ + ++ A+ +F +M+ C PN TY+ L+N + R G
Sbjct: 72 ESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRY 131
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRASYNIM 324
++ ++F +++ + EP+ YN L+ + +++ H EP+ +Y +
Sbjct: 132 DDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGL 191
Query: 325 VDAYGRAGLHE 335
+ A G+ GLHE
Sbjct: 192 IFACGKGGLHE 202
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ LH+ A+ L + + +P+ Y +++AY + L E+A F M + G
Sbjct: 191 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 250
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS I KGG +++ I +M + + +T+ +I + + + A+
Sbjct: 251 SKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAI 310
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K + EM +C P+ T A+++ + GL EE+EE F +++ GI P V Y ++ Y
Sbjct: 311 KAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVY 370
Query: 305 RLISR 309
R
Sbjct: 371 AKADR 375
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
MR G+ V YN+ + + G +A +F+ M P TY+ ++ +GK ++
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+L EM S P+I +Y L+ A A+ G +EA +F Q+QGAG P+ Y+
Sbjct: 61 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120
Query: 300 LMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ Y L M + EP+ A+YNI+++ +G G
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGG 164
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Query: 104 VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA 163
+ L +N+K +V S +IEAYGQ +L+++A + + + PT +TY L++
Sbjct: 207 ILLHMNEK--GVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQM 264
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+ GL +++EA+ +M + G+ + +N I+ +GG ++A++ + M++ C P
Sbjct: 265 FAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPD 324
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+T ++++Y A + + F E+++ P++ Y ++ +A+ ++A ++ +
Sbjct: 325 EQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLD 384
Query: 284 QL 285
++
Sbjct: 385 EM 386
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 46/258 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + ++A+ LE++D P TY L+ + G +E+A + EM
Sbjct: 290 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 349
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + +++N+ ++G+ K G +KA+EI Q M +P ++TY+L+I + + A
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 409
Query: 244 LKLFNEMRSHK-----------------------------------CKPNICTYTALVNA 268
+L +EM+ K KPN YT L+ A
Sbjct: 410 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 469
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---------MEAYR--LISRMHMGCEPD 317
A+EG EE+ I E+++ GI PDV+ YN+L ME R L+ + P+
Sbjct: 470 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 529
Query: 318 RASYNIMVDAYGRAGLHE 335
+Y +D Y +AG E
Sbjct: 530 AHTYGAFIDGYSKAGEME 547
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 49/238 (20%)
Query: 144 ELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+LL+ CI P TY +L+ C +G +E+A+ +F ++ GL P+ V Y + +DG
Sbjct: 656 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 715
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--------- 250
K NP A ++ + M P Y +++N K K AL LF EM
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV 775
Query: 251 ----------RSHKCK---------------PNICTYTALVNAFAREGLCEEAEEIFEQL 285
+S K + PN TYT+L++ + G+ EA+ ++ ++
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 286 QGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
Q + P Y +L+ Y I M G EPD+ +Y +M+DAY R G
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 893
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + ++A +E+L+ R P TY + Y +G +E A+ F EM G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +Y + I+G K GN +A +F+ + +TY+++I+ + K A
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+F+E++ PN TY +L++ ++G ++A ++ E++ GI PD+ YN L++
Sbjct: 621 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 680
Query: 303 --------AYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
A L + G P+ +Y MVD Y ++
Sbjct: 681 CKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 718
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE + ++ +A + +L R + TY++L+ +G + +A +F E+++ G
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+A YNS I G K GN KA ++ + M P TY ++I+ KA + A
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF+++ PN TY A+V+ + + A ++ E++ G+ PD + YN ++
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 750
Query: 302 -------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+A L M S+N +++ Y ++G
Sbjct: 751 CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSG 788
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 11/225 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V L+ A+ ++ +++ + + +P Y L+ +C + +E+A
Sbjct: 460 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 519
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM + L P+A Y ++IDG K G + A F M P+ YT +I + K
Sbjct: 520 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 579
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A +F + S + ++ TY+ L++ +R G EA IF +LQ G+ P+ + YN
Sbjct: 580 NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYN 639
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+L+ +A +L+ M + G PD +YNI++D +AG
Sbjct: 640 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 684
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 21/230 (9%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC----IPTEDTYALLLKAYCMSGLLEK 172
L+SC S+L G K E + ++ D C +P TY ++ A+C G ++
Sbjct: 180 LLSCNSLL-----GDLLKGNKVEL-FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 233
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A+ V EM + G P+ V YN I GL + +A+E+ + M P TY ++IN
Sbjct: 234 AKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILIN 293
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ +S A + EM KP TY AL++ F R+G E+A I +++ GIE
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA 353
Query: 293 DVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGRA 331
++ +N L+ +A ++ M G EPD +Y+++++ + R
Sbjct: 354 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 403
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLIE + + +A E+ + PT TY++++ C G L+ A+ REM
Sbjct: 395 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 454
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+AVVY + + K G +++ I +RM+ P Y +I + KA + A
Sbjct: 455 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 514
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EM + +PN TY A ++ +++ G E A+ F ++ G+ P+V Y AL+E
Sbjct: 515 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 574
Query: 304 Y 304
+
Sbjct: 575 H 575
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ +Y G L +A VF + + PS + NS + LLKG + ++
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P TYT MI+ + K A ++ EM C PN+ TY ++ R
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
L +EA E+ + G+ PD+Y Y+ L+ + L+ + +G +P+ +
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322
Query: 321 YNIMVDAYGRAG 332
YN ++D + R G
Sbjct: 323 YNALIDGFMRQG 334
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +A + EL + +P TY L+ C G ++KA + EM
Sbjct: 605 VLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 664
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V YN IDGL K G ++A +F ++ P+ TY M++ Y K+ A
Sbjct: 665 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM P+ Y ++N +E E+A ++F+++ G V ++N L+E
Sbjct: 725 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEG 783
Query: 304 Y----RLISRMHMGCE-------PDRASYNIMVDAYGRAGL 333
Y +L H+ E P+ +Y ++D +AG+
Sbjct: 784 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
KS + A F LE + R +P + Y ++L C EKA +F+EM + G S V
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STV 775
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+N+ I+G K G Q+A + + M P+ TYT +I+ KA A +L+ EM
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ P TYT+L++ + G E +FE++ GIEPD Y +++AY
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 889
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY+LL++ +C + +A + EM+K L P+ + Y+ I+GL + G
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 439
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q I + M + +P+ YT ++ + K + + + MR P++ Y
Sbjct: 440 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 499
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
+L+ F + EEA ++ + P+ + Y A ++ Y M +
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G P+ Y +++ + + G
Sbjct: 560 GVLPNVGIYTALIEGHCKEG 579
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ L++ YC SG L++A + EM + P+ V Y S ID K G +A ++ M
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ +TYT +++ Y LF EM + +P+ TY +++A+ REG
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EA ++ +++ G+ V AY+AL++A
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQA 923
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y + ++A E+++ + IP TY L+ C +G++ +A+ ++ EM++
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A Y S + G GN + +F+ M +P TY +MI+ Y + A
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 899
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
KL +E+ ++ Y AL+ A ++ EE FE L+
Sbjct: 900 KLKDEILVKGMPMSVAAYDALIQALCKK------EEFFEVLK 935
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +A+ +LE+ + +PT TY LL Y G + + A+F EM G
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + Y ID + GN +A ++ + S Y +I K + F L
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVL 934
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
KL NE+ + + T + + F G +EA E+ +
Sbjct: 935 KLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P++V+++ +D K G +AV +F K +PS + ++ K +K + K+
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
F+ M +HK P++ TYT +++A + G ++A+ + L
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV------------------------L 238
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAGL 333
+ GC P+ +YN+++ RA L
Sbjct: 239 LEMGEKGCSPNLVTYNVIIGGLCRARL 265
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 14/218 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + S +KA L+ S +P TY +++ C G L+KA + M K G
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS + Y + ++GL + G +A IF+ M C Y ++N Y K+S++ A
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+ + +R P I Y AL++ + +EG +E +FE + G P++ YN +M
Sbjct: 527 KVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
EA+ + MH GC PD SYNI++D +A
Sbjct: 584 CKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 621
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI ++ +A+ E + S +P TY++L C G +++A + +E
Sbjct: 332 CTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 391
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M G P+ V YN+ IDGL K +KA E+ + + P TYT++++ K +
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
ALK+ M C P++ TYTAL+ R G +EA IF+++ D AY +
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511
Query: 300 LMEAYRLISRMH--------MGCEPDRASYNIMVDAYGRAG 332
L+ Y SR + P YN ++D Y + G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEG 552
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + + P TY +L+ C + +KA + EM G+ P V +NS +DGL K G
Sbjct: 251 EMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG 310
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A + M C+PS TY +I+ K A L +E S P++ TY+
Sbjct: 311 KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYS 370
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLI-SRMHM 312
L + + G +EA E+ +++ G G P++ YN L++ AY L+ S +
Sbjct: 371 ILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS 430
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y I+VD + G
Sbjct: 431 GFVPDVVTYTIIVDGLCKEG 450
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 149 RCIPTEDT--YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
R IP+ D Y ++ +C + A +EM + + P YN IDGL K
Sbjct: 219 RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTD 278
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA E+ M P T T+ +++ KA K A L M C+P+ CTY L+
Sbjct: 279 KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLI 338
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCE 315
+ ++ + A+++ ++ +G PDV Y+ L EA+ L+ M GC
Sbjct: 339 SGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCT 398
Query: 316 PDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
P+ +YN ++D +A E +Y L+E
Sbjct: 399 PNLVTYNTLIDGLCKASKTEK--AYELLE 425
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + S KA E++D P T+ ++ C +G E+A ++ M +
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PS YN+ I GL K N +A ++ P TY+++ + K + A
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA 385
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM C PN+ TY L++ + E+A E+ E L +G PDV Y +++
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDG 445
Query: 304 Y----RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
RL + M GC P +Y +++ R G
Sbjct: 446 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDS-RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+ L+ Y + S K+A+ +++D R P D Y L+ YC G L++ VF +M
Sbjct: 510 VSLVNGYCKSSRTKEAQ----KVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA 565
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P+ YN +DGL K G +A + M C P +Y ++I+ KASK
Sbjct: 566 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPK 625
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++ ++M P+ TY L+ F +E ++A I + + AG++PD YN L+
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 685
Query: 302 ----------EAYRLISRM-HMGCEPDR-ASYNIMVDAYGRAG 332
+AY L+ M GC +YN ++D + G
Sbjct: 686 SGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 728
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ + C P+ TY L+ C +++A+ + E G P V Y+ DGL K G
Sbjct: 322 MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGR 381
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A E+ + M C P+ TY +I+ KASK+ A +L + S P++ TYT
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTI 441
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
+V+ +EG ++A ++ E + G P V Y ALM EA+ + M
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501
Query: 314 CEPDRASYNIMVDAYGRA 331
C D +Y +V+ Y ++
Sbjct: 502 CTADALAYVSLVNGYCKS 519
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 15/192 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+LD+ P TY L++K+ C ++KA + + + G P VY K G
Sbjct: 151 MLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGR 210
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ A+EIF R+ P Y +I+ + + + AL+ EM K P++ TY
Sbjct: 211 LKDALEIF----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNI 266
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L++ + ++A E+ ++ G+ PD +N++M+ A+ L++ M
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326
Query: 314 CEPDRASYNIMV 325
C P +YN ++
Sbjct: 327 CRPSCCTYNTLI 338
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G S N ++ LL+ G+ + +F+RM P + TY L+I + ++ A
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+ ++ + KP + YT L AF + G ++A EIF + PD AYNA++
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHG 235
Query: 303 ---------AYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
A + M+ PD +YNI++D +A
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKA 274
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 31/310 (10%)
Query: 54 FVDGIFPVLSPT-AQQIL-RFVQREVDSNTI-WDAFDSLPPTHATWDDLINVSVQLRLNK 110
+DG+F P A+Q+L + +Q + + + ++ + +DD + + ++ +
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI-LKNMIKA 672
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE-DTYALLLKAYCMSGL 169
DP + LI Q + A E+L + C+ + TY ++ C G
Sbjct: 673 GVDPD---NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 729
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L++A + M +G+ + V YN +ID L K G +A + M D + T+
Sbjct: 730 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEVSYTTV 787
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNIC----TYTALVNAFAREGLCEEAEEIFEQL 285
+I L KA + A KL EM + K +C T+ L++AF + +EA + +
Sbjct: 788 IIGLC-KAEQLDRASKLAREMVAVK---GLCITSHTFNLLIDAFTKTKRLDEALTLLGLM 843
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLH 334
G P V YN ++ +A+ L M + G SY +++ YG G
Sbjct: 844 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI--YGLCGQG 901
Query: 335 EGKCSYSLVE 344
GK + ++E
Sbjct: 902 RGKEALQVLE 911
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
E +Y ++ C + L++A + REM GL ++ +N ID K +A+ +
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M + C PS TY ++I K K A +LF+EM + +YT L+ +
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900
Query: 273 GLCEEAEEIFEQLQGAGIEPD 293
G +EA ++ E++ + E D
Sbjct: 901 GRGKEALQVLEEMASSDCEID 921
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
CI T T+ LL+ A+ + L++A + M + G PS + YN I L K KA
Sbjct: 814 CI-TSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAW 872
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
E+F M S+ +YT++I + AL++ EM S C+
Sbjct: 873 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LLI+A+ + +A T L L+ R C P+ TY +++ C ++KA +F EM
Sbjct: 822 LLIDAFTKTKRLDEA-LTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAV 880
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
G+ S+V Y I GL G ++A+++ + M C+
Sbjct: 881 RGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P TY +LL+A C ++A + EM G P V YN ++G+ + G + A+
Sbjct: 197 CLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAM 256
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E + + C+P+T +Y +++ A + A KL EM C PN+ T+ L++
Sbjct: 257 EFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFL 316
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
R GL E A E+ EQ+ G P+ +YN L+ A+ ++H GC PD
Sbjct: 317 CRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDI 376
Query: 319 ASYNIMVDAYGRAG 332
SYN ++ A R G
Sbjct: 377 VSYNTLLTALCRNG 390
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ YC +G L+ A + +M + P A YN+ I GL G A+ +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M R C P TYT+++ K S A+KL +EM C P+I TY ++N +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E+A E + L G EP+ +YN ++ +A +L+ M H GC P+ +
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 321 YNIMVDAYGRAGLHE 335
+N+++ R GL E
Sbjct: 309 FNMLISFLCRRGLVE 323
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EA ++S +K+A E+ D C P TY ++L C G +E A + + Y
Sbjct: 206 ILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSY 265
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V YN + GL + A ++ + M C P+ T+ ++I+ + A
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 325
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++ +M + C PN +Y L++AF ++ +A E E + G PD+ +YN L+ A
Sbjct: 326 MEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385
Query: 304 Y-------RLISRMHM----GCEPDRASYNIMVDAYGRAG 332
I +H GC P SYN ++D +AG
Sbjct: 386 LCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y LL A+C + KA M G P V YN+ + L + G A+
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 396
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ ++K C P +Y +I+ KA K+ AL+L +EM S +P+I TY+ + +
Sbjct: 397 ELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGL 456
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
RE EEA F ++Q GI P YNA++ A L + M GC P+
Sbjct: 457 CREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNE 516
Query: 319 ASYNIMVDAYGRAGL 333
++Y I+V+ GL
Sbjct: 517 STYTILVEGLAYEGL 531
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE E+ C P T+ +L+ C GL+E A V +M +YG P+++ YN
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K KA+E + M C P +Y ++ + + +A++L ++++ C
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P + +Y +++ + G +EA E+ +++ G++PD+ Y+ + EA R
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467
Query: 306 LISRMH-MGCEPDRASYNIMV 325
++ MG P A YN ++
Sbjct: 468 TFCKVQDMGIRPTAALYNAIL 488
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 131 QKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
QK +HK EF +EL+ SR C P +Y LL A C +G ++ A + +++ G P
Sbjct: 354 QKKIHKAMEF--VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----------------- 232
+ YN+ IDGL K G ++A+E+ M QP TY+ + +
Sbjct: 412 ISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471
Query: 233 -----------LYG-------KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
LY K ++ A+ LF M S C PN TYT LV A EGL
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGL 531
Query: 275 CEEAEEIFEQLQGAGI 290
+EA E+F QL G+
Sbjct: 532 VKEARELFAQLCSRGV 547
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 15/236 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+NK + P V++ + L+ + K++ K + +E+L+S P Y ++ +C
Sbjct: 105 VNKGYTPDVIL--CTKLIKGFFNFKNIEKASRV--MEILESHTEPDVFAYNAVISGFCKV 160
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
+E A V M+ G P V YN I L A+ + ++ D C P+ TY
Sbjct: 161 NQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITY 220
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T++I A+KL EM + P++ TY A++ +EG+ E A E+ L
Sbjct: 221 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 280
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G EPDV +YN L+ A+ +L++ M GCEP++ +Y+I++ + R G
Sbjct: 281 KGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 336
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+LL C+PT TY +L++A + G + +A + EM GL P YN+ I G+ K G
Sbjct: 207 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 266
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A E+ + C+P +Y +++ + K KL EM S C+PN TY+
Sbjct: 267 MVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 326
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+++ R G +EA + + + + PD Y+Y+ L+ A R+ +
Sbjct: 327 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 386
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD +YN ++ A + G
Sbjct: 387 GCLPDIVNYNTILAALCKNG 406
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 153 TEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T DTY+ L+ A C G L+ A + M G P V YN+ + L K GN +A+E
Sbjct: 354 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 413
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF +++ C P+ +Y MI+ AL + M S P+ TY +L++
Sbjct: 414 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC 473
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
R+GL EEA + + ++ +G P V +YN ++ +A + + M GC P+
Sbjct: 474 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 533
Query: 320 SYNIMVDAYGRAG 332
+Y ++++ G AG
Sbjct: 534 TYILLIEGIGFAG 546
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I ++ + ++A L C P +Y +LL+A+ G ++ E + EM G
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y+ I L + G +A+ + + M P T +Y +I+ K + +A+
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + M S+ C P+I Y ++ A + G +A EIF +L+G G P+V +YN ++ A
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ + + G +PD +YN ++ R GL E
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVE 479
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K + +EKA V E+ + P YN+ I G K + A ++ RMK
Sbjct: 119 LIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARG 177
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P TY +MI K +AL + +++ C P + TYT L+ A EG EA
Sbjct: 178 FLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 237
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
++ E++ G+ PD+Y YNA++ A LI+ + GCEPD SYNI++
Sbjct: 238 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILL--- 294
Query: 329 GRAGLHEGK 337
RA L++GK
Sbjct: 295 -RAFLNQGK 302
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+ + + E E+ C P + TY++L+ + C G +++A +V + M +
Sbjct: 292 ILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 351
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P Y+ I L K G A+ I M + C P Y ++ K + A
Sbjct: 352 ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA 411
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L++FN++R C PN+ +Y +++A G A + + GI+PD YN+L+
Sbjct: 412 LEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISC 471
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMV 325
EA L+ M G P SYNI++
Sbjct: 472 LCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ C GL+E+A + +M + G P+ + YN + GL K A+ +
Sbjct: 460 PDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGM 519
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
F M C+P+ TY L+I G A A++L N + S
Sbjct: 520 FAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ A G +A + M G+ P + YNS I L + G ++A+
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M++ +P+ +Y +++ K + A+ +F EM C+PN TY L+
Sbjct: 483 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542
Query: 270 AREGLCEEAEEIFEQL 285
G EA E+ L
Sbjct: 543 GFAGWRTEAMELANSL 558
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L +A VF++M++ G P V Y + ID K G
Sbjct: 374 EMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAG 433
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++QRM+ P T TY+++IN GKA A +LF EM C PN+ T+
Sbjct: 434 FLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 493
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
++ A+ E A +++ +Q AG +PD Y+ +M EA + + M
Sbjct: 494 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 553
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 554 NWVPDEPVYGLLVDLWGKAG 573
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + ++ ++ C P TY L+ + +G L+ A +++ M+ G
Sbjct: 390 LIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAG 449
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A +F M C P+ T+ +MI L+ KA AL
Sbjct: 450 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 509
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
KL+ +M++ +P+ TY+ ++ G EEAE +F ++Q PD Y L++
Sbjct: 510 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 569
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
A++ M H G P+ + N ++ + R +H +Y+L++
Sbjct: 570 GKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLR--VHRMSEAYNLLQ 618
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + + M +D C+P+T TY +I+ YG+A+
Sbjct: 341 RQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYL 400
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ +F +M+ C+P+ TY L++ A+ G + A ++++++Q AG+ PD + Y+ +
Sbjct: 401 NEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVI 460
Query: 301 ME----------AYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
+ A+RL M GC P+ ++NIM+ + + AG
Sbjct: 461 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 520
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 521 QPDKVTYSIVMEVLGH 536
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++ C P T+ +++ + + E A ++R+M+
Sbjct: 459 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 518
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M+R P Y L+++L+GKA A
Sbjct: 519 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKA 578
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + EM +PN+ T +L++ F R EA + + + G+ P + Y L+
Sbjct: 579 WQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 636
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + ++ A Y ++ ++ P + TY+++++ G LE+AE VF EM++
Sbjct: 494 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 553
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN +KA + +Q M +P+ T +++ + + + A
Sbjct: 554 NWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEA 613
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
L M + P++ TYT L++ C +A F+
Sbjct: 614 YNLLQSMLALGLHPSLQTYTLLLSC------CTDARSNFD 647
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 125 LIEAY---GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
LI+ Y G+ KA+ E++ P E TY +L+ +C + A VF EM+
Sbjct: 196 LIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ 255
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ GL P+ V YN I+GL G +AV + +M +P+ T+ ++IN + K
Sbjct: 256 RQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A+ LFN+M PN TYT L++A+ ++G E+A ++ + GI P+V YN L+
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 302 ----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A L++ M D +YNI++D+ + G
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKG 417
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 16/233 (6%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
L+SC +L ++S + EF Y E++ + ++ +++ C G L +A V
Sbjct: 120 LISCNPLL--SGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQ---KAVEIFQRMKRDCCQPSTETYTLMINL 233
+M+ +G+ P+ + YN+ IDG K G KA I + M P+ TY ++I+
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDG 237
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ K A+++F EM+ +PN+ TY L+N +G +EA + +Q+ + +EP+
Sbjct: 238 FCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPN 297
Query: 294 VYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
V +N L+ EA L + M G +P+ +Y ++DAY + G E
Sbjct: 298 VVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRME 350
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 26/259 (10%)
Query: 89 LPPTHATWDDLIN---------VSVQLR---LNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
L P T++ LIN +V LR ++ +P V+ V LI + +
Sbjct: 259 LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV---LINGFCKNKTVN 315
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + ++ P TY L+ AYC G +E A A++ M G+ P YN I
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL + G+ + A + M TY ++I+ K +S A+KL +EM
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR------- 309
P+ TY L++ + REG A + +++ G + +V +N L++ + L R
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGL 495
Query: 310 ----MHMGCEPDRASYNIM 324
+ G P+R +Y I+
Sbjct: 496 LNEMLERGLVPNRTTYEII 514
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 5/193 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY + + A Y ++D P TY L+ C G ++ A ++ EM
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V YN ID L K G +KAV++ M PS TY +++ Y + AL
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M + N+ T+ L+ F +G E+A + ++ G+ P+ Y + E
Sbjct: 459 IVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE-- 516
Query: 305 RLISRMHMGCEPD 317
M G PD
Sbjct: 517 ---EMMEKGFVPD 526
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K K A E++ + TY +L+ + C G KA + EM + G
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L PS V YN+ +DG + GN + A+ + RM+R Q + T+ ++I + + A
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDAN 493
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
L NEM PN TY + +G + E
Sbjct: 494 GLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIE 528
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
DS C+ + L+L +L EA F+ YG S + N + GL+K
Sbjct: 79 DSFCVNSILADMLVLAFVRNLKILRGFEA-FKRAGDYGFKLSLISCNPLLSGLVKESENG 137
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+++ M + + + ++ +++N K K A + +M+ PN+ TY L+
Sbjct: 138 DMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLI 197
Query: 267 NAF---AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-M 312
+ + R G +A+ I +++ GI P+ YN L++ + R+ M
Sbjct: 198 DGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQ 257
Query: 313 GCEPDRASYNIMVDA 327
G P+ +YNI+++
Sbjct: 258 GLRPNVVTYNILING 272
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TYA ++ YC SG L KA +F EM G+PP + VY++ IDG K GN +KA+ +F
Sbjct: 728 TYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLES 787
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ ST + +++ + K+ K A +L +M KP+ TYT L++ + G
Sbjct: 788 VQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFL 846
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
+EAE+ F +Q + P+ Y AL+ Y + R + EPD ++++M
Sbjct: 847 KEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVM 906
Query: 325 VDAYGRAGLH 334
+DA+ + G H
Sbjct: 907 IDAHLKEGDH 916
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L++ + TY L+ A+ +G ++ + + EM + G PS V YN I GL +
Sbjct: 224 YNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCR 283
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A E+ + M + TY+++I+ +GK + A + EM S KP
Sbjct: 284 AGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVA 343
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
YTAL++ F R+G EA + E++ G++ +++ YNAL+ +A L++ M
Sbjct: 344 YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMI 403
Query: 312 M-GCEPDRASYNIMVDAY 328
M G +PD +YN M++ Y
Sbjct: 404 MVGIKPDTQTYNNMIEGY 421
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 11/223 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IE Y ++ + + E+ S +PT T +++ C G +E A VF M G
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+AV+Y + I G ++ G Q+AV I + M + QP Y +I K+ K A
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAK 536
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EM KPN+ TY AL++ + + G + A+ F+++ G GI P+ AL++ Y
Sbjct: 537 DYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGY 596
Query: 305 ---------RLISRMHMG--CEPDRASYNIMVDAYGRAGLHEG 336
I R +G PD +Y+ ++ R G +G
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQG 639
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 28/280 (10%)
Query: 78 DSNTIWDAFDSL--PPTHATWDDLINVSVQ-------LRLNKKWD-----PIVLMSCVSI 123
D++ +++ SL P + LI VQ +R+ K D P VL C +
Sbjct: 464 DASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVL--CYNS 521
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + ++ +E+++ P TY L+ YC SG ++ A+ F+EM
Sbjct: 522 VIIGLCKSRKMEEAKDY-LVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGC 580
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ VV + IDG K G+ +A IF+ M P TY+ +I+ + K A
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
++L +E P++ TY ++++ F ++G +A ++ E + GI P++ YNAL+
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A L + G + +Y ++D Y ++G
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSG 740
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E L+ +P TY ++ +C G + KA + M + G+ P+ + YN+ I+GL K G
Sbjct: 646 EFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAG 705
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A E+F + + TY +I+ Y K+ A +LF+EM P+ Y+
Sbjct: 706 EIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYS 765
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
AL++ +EG E+A +F + G + NALM EA +L+ M
Sbjct: 766 ALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDK 824
Query: 313 GCEPDRASYNIMVDAYGRAGL 333
+PD +Y I++D + + G
Sbjct: 825 HVKPDHVTYTILIDYHCKTGF 845
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ +G++ +A+ E+ P Y L+ + G +A V EM
Sbjct: 311 ILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLAR 370
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + YN+ + G+ K G+ +KA + M +P T+TY MI Y K +
Sbjct: 371 GVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L +EM+ P T ++N R G E+A +FE + G++P+ Y L+
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMV 325
EA R++ M G +PD YN ++
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
V LI+ Y ++ +A + +L P TY+ L+ +G L+ A + E
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ GL P YNS I G K G KA ++ + M + P+ TY +IN KA +
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +LF+ + N TY +++ + + G +A +F+++ G+ PD + Y+AL
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767
Query: 301 MEAYR 305
++ R
Sbjct: 768 IDGCR 772
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 46/223 (20%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+K C G +EKA+A+ EM G+ P YN+ I+G LK N + ++ M
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ P+ T ++IN + A ++F M S KPN YT L+ +EG
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497
Query: 276 EEAEEIFEQLQGAGIEPDV-----------------------------------YAYNAL 300
+EA I + + G++PDV Y Y AL
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557
Query: 301 MEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+ Y M + G P+ ++D Y + G
Sbjct: 558 IHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEG 600
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++D P TY +L+ +C +G L++AE F +M+K L P+A+ Y + + G G
Sbjct: 820 DMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAG 879
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--RSHKCKPNICT 261
+ +F M +P T+++MI+ + K LKL ++M + N+C
Sbjct: 880 RRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVC- 938
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
L++ R+ E ++ E+++ G+ + + L+ + +M
Sbjct: 939 -HVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKM 986
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ ++ +KA +LE + T AL+ +C SG + +A + +M
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALM-DGFCKSGKVIEANQLLEDMVDKH 825
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y ID K G ++A + F M++ P+ TYT +++ Y A +
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMF 885
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREG 273
LF+EM + +P+ T++ +++A +EG
Sbjct: 886 ALFDEMIAKDIEPDGVTWSVMIDAHLKEG 914
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 73/190 (38%), Gaps = 46/190 (24%)
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-------CCQP------------------- 222
VV+ IDG K G +AV F KR+ CC
Sbjct: 166 GVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225
Query: 223 ---------STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
TYT +IN + +A + +L EM C P++ TY ++ R G
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
+EA E+ + + G+ DV+ Y+ L+ EA ++ M G +P +Y
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345
Query: 323 IMVDAYGRAG 332
++D + R G
Sbjct: 346 ALIDGFMRQG 355
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + K+AE ++++ +P TY LL Y M+G + A+F EM
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P V ++ ID LK G+ K +++ M + S ++I+ +
Sbjct: 895 DIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEV 954
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
LK+ ++ ++ T + LV F + G + A + + + PD N L+
Sbjct: 955 LKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 16/244 (6%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD +N+ V+L +++ P + + +L+ + A+ + E+LD +P
Sbjct: 432 DDAVNMKVKL-IDRGVSP---DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYV 487
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
YA L+ + SG ++A VF + G+ V +N+ I G + G +A+ RM
Sbjct: 488 YATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P TY+ +I+ Y K A+K+F +M +KCKPN+ TYT+L+N F +G
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFS 607
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR------------MHMGCEPDRASYNIM 324
AEE F+++Q + P+V Y L+ ++ S M C P+ ++N +
Sbjct: 608 LAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 325 VDAY 328
+ +
Sbjct: 668 LQGF 671
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 119/287 (41%), Gaps = 26/287 (9%)
Query: 83 WDAFDSLPPTHATWDDLIN---------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKS 133
W + P AT++ LIN V+ L ++L + LI+AY +
Sbjct: 335 WIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSK 394
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
+ A L+L + C P TY +L+ +SG ++ A + ++ G+ P A +YN
Sbjct: 395 EYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ GL K G A +F M P Y +I+ + ++ A K+F
Sbjct: 455 MLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEK 514
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------- 304
K ++ + A++ F R G+ +EA ++ + PD + Y+ +++ Y
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 305 -RLISRMHMG-CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
++ M C+P+ +Y +++ + G +SL E + K
Sbjct: 575 IKIFRDMEKNKCKPNVVTYTSLINGFCCQG------DFSLAEETFKE 615
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 48/226 (21%)
Query: 155 DTYA--LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
D Y+ +++K C G +E+ + + G P+ V YN+ I G K G+ + A +F
Sbjct: 204 DNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVF 263
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR--------------------- 251
+ +K P+ ET+ MIN + K + +L E++
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRH 323
Query: 252 --------------SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
++ CKP+I TY L+N +EG E A + ++ G+ +Y
Sbjct: 324 GFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSY 383
Query: 298 NALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
L++AY L+ GC+PD +Y I++ +G
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSG 429
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + A+ + EL +PT +T+ ++ +C G ++ + E+++ G
Sbjct: 246 IIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERG 305
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L N+ ID + G E + + + C+P TY ++IN K K +A
Sbjct: 306 LRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAA 365
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +E +Y L+ A+ + + A ++ QL G +PD+ Y L+
Sbjct: 366 GLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHG- 424
Query: 305 RLISRMHM-------------GCEPDRASYNIMVDAYGRAG 332
L+ HM G PD A YN+++ + G
Sbjct: 425 -LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y ++ A + ++ ++C P TY L+ +C G AE F+EM+
Sbjct: 561 IIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRD 620
Query: 185 LPPSAVVYNSYIDGLLKGGNP-QKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS----- 238
L P+ V Y + I K + +KAV ++ M + C P+ T+ ++ + K +
Sbjct: 621 LVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFL 680
Query: 239 ---------KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+SF+ + F+ M+S + Y +++ G+ + A + +++ G
Sbjct: 681 GEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKG 740
Query: 290 IEPDVYAYNALMEAYRLI 307
PD ++ A++ + ++
Sbjct: 741 FSPDPVSFAAILHGFCVV 758
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 125 LIEAYGQKSLHKKAEFTY---LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
++ AY + KA Y +EL DS +P LL S LE A V+ EM
Sbjct: 140 VLHAYAESGFLSKAVEIYDYVVELYDS--VPDVIACNALLSLVVKSRRLEDARKVYDEMC 197
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ G + G+ G ++ ++ + C P+ Y +I Y K
Sbjct: 198 ERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIE 257
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +F E++ P + T+ ++N F ++G ++ + E+++ G+ V+ N ++
Sbjct: 258 NAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNII 317
Query: 302 EA-YRLISRMHMG----------CEPDRASYNIMVDAYGRAGLHE 335
+A YR ++ C+PD A+YNI+++ + G E
Sbjct: 318 DAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKE 362
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C+P T+ ++ YC +G LE A AV+ +M G+ P+ V YN I+G K G+
Sbjct: 146 DGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLG 205
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AVE++Q+M R C P T++ +I+ Y + + AL+++++M H+ +PN+ T++ ++
Sbjct: 206 SAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIII 265
Query: 267 NAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAY---------RLISR--MHMGC 314
++ ++ +EA + +L I P + YN +++ LI + GC
Sbjct: 266 HSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGC 325
Query: 315 EPDRASYNIMVDAY 328
PD+ +Y I++ Y
Sbjct: 326 RPDKYTYTILIIGY 339
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + A Y +++ S +P TY +L+ Y G L A V+++M +
Sbjct: 159 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 218
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP V ++S IDG + G A+ I+ M + QP+ T++++I+ K ++S A+
Sbjct: 219 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 278
Query: 245 KLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L NE+ P Y +++ + G +EA I + ++ G PD Y Y L+
Sbjct: 279 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 338
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
Y + SR+ GC PD + N + +AG+
Sbjct: 339 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 379
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 157 YALLLKAYCMSGLLEKAEAVF-REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y L+ + G + A+F R ++ P +N I G+ + G QKA+E+ +RM
Sbjct: 49 YNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM 108
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGL 274
C P T T+ ++++ + ++ ++ + R C PN+ T+T++++ + + G
Sbjct: 109 NEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGK 168
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHMGCEPDRASY 321
E+A ++ + +GI P+ YN L+ E Y+ ++R+ C PD ++
Sbjct: 169 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR--CPPDVVTF 226
Query: 322 NIMVDAYGRAG 332
+ ++D Y R G
Sbjct: 227 SSLIDGYCRCG 237
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 1/179 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A Y ++ RC P T++ L+ YC G L+ A ++ +M ++
Sbjct: 193 VLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 252
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFM 242
+ P+ ++ I L K +A+ + + R P Y +I++ K K
Sbjct: 253 RIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 312
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A + M C+P+ TYT L+ + + EA F ++ AG PD N +
Sbjct: 313 ANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFI 371
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L+ + + LL+ + + + ++G A YN + L+ G V +
Sbjct: 9 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 68
Query: 212 FQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F+R +D P ++ ++I + + AL+L M C P+ T+ LV+
Sbjct: 69 FERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLC 128
Query: 271 REGLCEEAEEIFEQLQGAGI-EPDVYAYNALMEAY----RLISRMHM-------GCEPDR 318
R E+ +LQ G+ P+V + +++ Y +L M + G P+
Sbjct: 129 RTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNT 188
Query: 319 ASYNIMVDAYGRAG 332
+YN++++ YG+ G
Sbjct: 189 VTYNVLINGYGKVG 202
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ C+P T+ L+ A C LE+A + R++ GL P +N I+ L K G
Sbjct: 350 QMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVG 409
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+PQ A+ +F+ MK C P TY +I+ K AL L EM S C + TY
Sbjct: 410 DPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYN 469
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
+++ ++ EEAEE+F+Q+ GI + +N L+ +A +LIS+M
Sbjct: 470 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISE 529
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ +YN ++ Y + G
Sbjct: 530 GLQPNNITYNSILTHYCKQG 549
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + ++ K A +L+ C PT+ T +L+ YC G +E A ++ G
Sbjct: 226 LMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANG 285
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + YN++++GL + G+ A+++ M ++ P TY +++N K + A
Sbjct: 286 FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 345
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+ N+M C P+I T+ L+ A EEA ++ Q+ G+ PDVY +N L+
Sbjct: 346 GILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINAL 405
Query: 303 --------AYRLISRMH-MGCEPDRASYNIMVD 326
A RL M GC PD +YN ++D
Sbjct: 406 CKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ S C P E TY L+ C G L KA + +EM G P S V YN+ IDGL K
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M + T+ +I+ K + A +L ++M S +PN T
Sbjct: 478 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNIT 537
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y +++ + ++G ++A +I + + G E DV Y L+
Sbjct: 538 YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLI 577
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 15/239 (6%)
Query: 103 SVQLRLNKKWDPIVLMSCVSIL---LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL 159
+V L LN+ DP+ + +++ L+ + S K E Y E+ + P T+
Sbjct: 132 AVDLVLNQ-LDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNT 190
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+KA C + + A + EM G+ P + + + G ++ G+ + A+ + RM
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMG 250
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C P+ T ++IN Y K + AL + ++ +P+ TY VN + G A
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
++ + + G +PDV+ YN ++ EA ++++M GC PD ++N ++ A
Sbjct: 311 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C + TY ++ C +E+AE VF +M G+ +A+ +N+ IDGL K
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A ++ +M + QP+ TY ++ Y K A + M ++ + ++ TY
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HM 312
L+N + G + A ++ ++ G+ AYN +++ A L M +
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y I+ R G
Sbjct: 635 GEPPDAFTYKIVFRGLCRGG 654
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
Q T Y ++N+ + SK + +++EM KP++ T+ L+ A R A
Sbjct: 147 QADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVL 206
Query: 281 IFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYG 329
+ E++ +G+ PD + LM+ + R+ +RM MGC P + + N++++ Y
Sbjct: 207 MLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYC 266
Query: 330 RAGLHEGKCSYSLVELSVKHYP 351
+ G E Y E++ P
Sbjct: 267 KLGRVEDALGYIQQEIANGFEP 288
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+G+ VVYN ++ L++G + ++ M +P T+ ++ +A +
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRT 203
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+ + EM S P+ T+T L+ F EG + A + ++ G P N L+
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEG 336
Y + R+ G EPD+ +YN V+ + G H G
Sbjct: 264 GYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG-HVG 307
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+N+ Q+R ++ + L+ A + L ++A + + +S +
Sbjct: 169 WEGLLNLFAQMRHEGIQPDLITYNT----LLSACSSRGLVEQAAMVFKTMNESGVVADAV 224
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + S L + E + REM G PP YNS I+ GN A +F++M
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R C P ETY+ ++ +YG LF++M+ P + TY +L+ F G
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYF 344
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
+E+ +F + +G++PD Y+AL+
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALL 370
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 133/272 (48%), Gaps = 16/272 (5%)
Query: 78 DSNTIWDA--FDSLPPTHATWDDLINVSVQLR-LNKKWDPIVLMSCVSILLIEAYGQKSL 134
+S + DA + SL T A + L V LR + + +P + S LIEAY
Sbjct: 216 ESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNS--LIEAYADAGN 273
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
A + ++ C P +TY+ LL+ Y G E+ ++F +M+ PP+ YNS
Sbjct: 274 VHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNS 333
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I +GG Q+++ +F M +P TY+ ++++ G+ + A K+ M +++
Sbjct: 334 LIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNE 393
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---------- 304
P++ L++++ + + ++A + +++ AG++P V AY+AL++ Y
Sbjct: 394 STPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAG 453
Query: 305 -RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L + G + +S N +++AY + GLH+
Sbjct: 454 STLYAMNKAGFQAPVSSVNSVMEAYSKVGLHD 485
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PTE Y +++ GLLEK +F +M + + + + + I+ + G + ++
Sbjct: 78 CKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASL 137
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
+ RMK++ +P+ TY ++N K + L LF +MR +P++ TY L++A
Sbjct: 138 HLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSA 197
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPD 317
+ GL E+A +F+ + +G+ D Y +L++ + L+ M G PD
Sbjct: 198 CSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPD 257
Query: 318 RASYNIMVDAYGRAG 332
A YN +++AY AG
Sbjct: 258 IAGYNSLIEAYADAG 272
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL A GL+E+A VF+ M + G+ AV Y S +D + E+
Sbjct: 186 PDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEEL 245
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ + P Y +I Y A A +F +M+ C P++ TY+ L+ +
Sbjct: 246 LREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGN 305
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRAS 320
+G E+ +F ++ P V YN+L++ + I+ H G +PD A+
Sbjct: 306 QGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDAT 365
Query: 321 YNIMVDAYGRAGL 333
Y+ ++ GR GL
Sbjct: 366 YSALLSVCGRGGL 378
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI AYG+ ++ + + + P TY +L A GL E +F +MR
Sbjct: 123 LINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHE 182
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN+ + G ++A +F+ M TY +++ + +++
Sbjct: 183 GIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRV 242
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM P+I Y +L+ A+A G A +F+Q+Q G PDV Y+ L+
Sbjct: 243 EELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRI 302
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y L S M + P A+YN ++ +G G
Sbjct: 303 YGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGG 342
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
T ++L+ + + +A +F+ M R+ P+ +Y I + + G +K EI
Sbjct: 45 TMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEI 104
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M + + + +T +IN YG+ + +L L M+ + +PN+ TY ++NA ++
Sbjct: 105 FEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSK 164
Query: 272 EGL-CEEAEEIFEQLQGAGIEPDVYAYNALMEAYR---LISRMHM--------GCEPDRA 319
GL E +F Q++ GI+PD+ YN L+ A L+ + M G D
Sbjct: 165 GGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAV 224
Query: 320 SYNIMVDAYG 329
+Y +VD +
Sbjct: 225 TYKSLVDTFA 234
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 206 QKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A+ +F+ M+R C+P+ YT+MI + G+ ++F +M + K N+ +TA
Sbjct: 63 HRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTA 122
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRM-HM 312
L+NA+ R G E + + +++ +EP++ YN ++ A L ++M H
Sbjct: 123 LINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHE 182
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G +PD +YN ++ A GL E
Sbjct: 183 GIQPDLITYNTLLSACSSRGLVE 205
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 10/224 (4%)
Query: 88 SLPPTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKA 138
S PPT AT++ LI V S+ L + + L+ G+ L ++A
Sbjct: 323 STPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREA 382
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ +L + P+ + A L+ +Y + + A + +R+ GL P Y++ I G
Sbjct: 383 AKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQG 442
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKP 257
KGG +A M + Q + ++ Y K AL+ F+E++ + +
Sbjct: 443 YAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEV 502
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ T+ L+ + GL EEA+E F ++ P Y L+
Sbjct: 503 DERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLL 546
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+L+ SR C P ++ L+ A SG + A+ E+R+ G+ P + YN+ I
Sbjct: 220 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 279
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N ++AV+++ M CQP TY MI++YG+ S A +LF ++ S P+
Sbjct: 280 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 339
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
TY +L+ AFAREG ++ +EI E + G D YN ++ A++L S
Sbjct: 340 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 399
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGL 333
M + G PD +Y +++D+ G+A +
Sbjct: 400 MKLSGRSPDAVTYTVLIDSLGKANM 424
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++S ++A Y +++ RC P TY ++ Y G+ +A +F+++ G
Sbjct: 275 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 334
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + + GN K EI + M + TY +I++YGK + +A
Sbjct: 335 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 394
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+++M+ P+ TYT L+++ + + +EA E+ ++ A ++P + ++AL+ Y
Sbjct: 395 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGY 454
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGR 330
+ + G +PD +Y++M+D R
Sbjct: 455 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 491
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK--SFMALKLFN 248
VYN+ + + G K E+ M+ C+P ++ +IN K+ + +A++L N
Sbjct: 199 VYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLN 258
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
E+R +P+I TY L++A +RE EEA +++ + +PD++ YNA++ Y
Sbjct: 259 EVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCG 318
Query: 305 ------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
RL + G PD +YN ++ A+ R G
Sbjct: 319 MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREG 353
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG++ H A Y ++ S P TY +L+ + + ++++A V EM
Sbjct: 380 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAR 439
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +++ I G K G +A E F M R +P Y++M+++ + ++S A+
Sbjct: 440 VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAM 499
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
KL+ EM H KP+ Y ++ +E E+ ++ + ++
Sbjct: 500 KLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDME 541
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ G+ ++ K+A E+L++R PT T++ L+ Y +G +AE F M +
Sbjct: 414 VLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRS 473
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + Y+ +D LL+ KA++++Q M +P Y +M+ + GK ++
Sbjct: 474 GIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDV 533
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLC-EEAEEIFEQLQGAGIEPDVYAYNALME 302
K+ +M C N + ++ + +G C + A + G E D Y
Sbjct: 534 HKVVKDME-ELCGMN----SQVICSILVKGECFDHAANMLRLAISQGCELDQYGKARDFG 588
Query: 303 AYRLISRMHMG-----CEPDRASYNIMVDAYGRAGLH 334
+ + G C+ DR+ Y+IM+ + +G H
Sbjct: 589 LFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNH 625
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + H KAE + ++ PT T LL+ +Y SG E+AE V ++
Sbjct: 614 IMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE 673
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GLP S + Y+S ID LK G+ A++ MK+D +P +T + + + A
Sbjct: 674 GLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEA 733
Query: 244 LKLFNEMR 251
+ L +R
Sbjct: 734 IVLLKALR 741
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 206 QKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN-ICTYT 263
Q+A+E+++ + R P+ ++++ GKA++ +A+++F R+ N + Y
Sbjct: 144 QRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIF--ARAEAASGNTVQVYN 201
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------- 312
A++ +AR G + +E+ + ++ G EPD+ ++N L+ A +++ + +
Sbjct: 202 AMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVR 261
Query: 313 --GCEPDRASYNIMVDAYGR 330
G +PD +YN ++ A R
Sbjct: 262 RSGIQPDIITYNTLISACSR 281
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL C Y +++K + SG KAE + M++ G+ P+ + + G
Sbjct: 600 LLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQ 659
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P++A ++ +K + ST Y+ +I+ Y K +A++ EM+ +P+ +T
Sbjct: 660 PEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 719
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIE 291
V A + EA + + L+ G +
Sbjct: 720 FVRAASLSQHTSEAIVLLKALRDTGFD 746
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F+ + C+ Y +M+ ++ + A KL M+ +P I T L+ ++
Sbjct: 595 ELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSY 654
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDR 318
+ G EEAE++ + L+ G+ Y+++++AY +L+ G EPD
Sbjct: 655 SGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDH 714
Query: 319 ASYNIMVDA 327
+ V A
Sbjct: 715 RIWTCFVRA 723
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 15/237 (6%)
Query: 107 RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
R NK W P +C +L E + K Y E+L+ R + + +L+ +C
Sbjct: 93 RENKYWVP--FDTCRKVL--EHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCK 148
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
G + A++VF + K+GL PS V +N+ ++G +K G+ + + M QP T
Sbjct: 149 EGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYT 208
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y+++IN K SK A KLF+EM PN T+T L++ + G + A EI++Q+
Sbjct: 209 YSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQML 268
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G PD YN L+ +A L M M G +PD+ +Y ++D + G
Sbjct: 269 SQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEG 325
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDGITKW----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S +A + E+LD +P T+ L+ +C +G L+ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G P + YN+ I GL K G+ +A ++ M +P TYT +I+ K
Sbjct: 268 LSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + +YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIV 387
Query: 301 MEAY 304
M +
Sbjct: 388 MHEF 391
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C +++A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 264 YKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E A E +++ I D +Y AL+ +A +++ M +G +PD +
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGT 383
Query: 321 YNIMVDAYGRAG 332
Y I++ + + G
Sbjct: 384 YTIVMHEFCKNG 395
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L +A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + +YT +I+ K +S A K+ EM S KP+ T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT +++ F + G + ++ +++Q G P V
Sbjct: 384 YTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCV 416
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ C G LE A + M K + V Y + I GL K G A ++
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKM 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ M +P T TYT++++ + K M KL EM+ P + T
Sbjct: 369 LREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L++A VF +M++ G P V Y + ID K G
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG 443
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A++++QRM+ P T TY+++IN GKA A +LF EM C PN+ T+
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
++ A+ E A +++ +Q AG +PD Y+ +M EA + + M
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 564 NWVPDEPVYGLLVDLWGKAG 583
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + K+A + ++ ++ C P TY L+ + +G L+ A +++ M++ G
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A +F M C P+ T+ +MI L+ KA AL
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL+ +M++ +P+ TY+ ++ G EEAE +F ++Q PD Y L++ +
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 579
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + + ++ M RD C+P+T TY +I+ YG+A+
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ +FN+M+ C+P+ TY L++ A+ G + A ++++++Q AG+ PD + Y+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 301 ME----------AYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
+ A+RL M GC P+ ++NIM+ + + AG
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 531 QPDKVTYSIVMEVLGH 546
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++ C P T+ +++ + + E A ++R+M+
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M+R P Y L+++L+GKA A
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M +PN+ T +L++ F R EA + + + G+ P + Y L+
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + ++ A Y ++ ++ P + TY+++++ G LE+AE VF EM++
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN KA + +Q M + +P+ T +++ + + + A
Sbjct: 564 NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEA 623
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
L M + P++ TYT L++ C +A F+
Sbjct: 624 YNLLQSMLALGLHPSLQTYTLLLSC------CTDARSNFD 657
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y +K + A + + D+ +PT+ T +++K C +G + +F +
Sbjct: 442 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 501
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + YN+ IDG +K GN A +++ M PST TYT +I+ + K + +A
Sbjct: 502 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLA 561
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LKL N+M+ K +I Y L++ F + + A E+ +L+GAG+ P+ + YN+++
Sbjct: 562 LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG 621
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L +M + G D +Y ++D ++G
Sbjct: 622 FKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 661
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ +C ++ A + E+R GL P+ +YNS I G N ++A++++++M
Sbjct: 580 YGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 639
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +TYT +I+ K+ + A + EM S P+ +T L+N +G E
Sbjct: 640 NEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFE 699
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A +I E + G + P V YN L+ EA+RL M G PD +Y+I+V
Sbjct: 700 NARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759
Query: 326 DA 327
+
Sbjct: 760 NG 761
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ +C + A V++EM G P+AV + +DG K G+ + A I
Sbjct: 400 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSI 459
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RMK P+ T ++I KA +SF LFN+ S P Y +++ F +
Sbjct: 460 FHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK 519
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
EG A ++ ++ GI P Y +L++ + +L++ M G + D +
Sbjct: 520 EGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKA 579
Query: 321 YNIMVDAY 328
Y ++D +
Sbjct: 580 YGTLIDGF 587
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 12/184 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K YCM G L A + E+ + GL P+ V Y+ IDG K GN +KA E + MK
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 328
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+ S + ++ Y K A +FN+ N+ T+ L++ +EG EA
Sbjct: 329 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEAC 387
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAY 328
+++++ GI P+V +YN ++ + ++ C+ P+ ++ I++D Y
Sbjct: 388 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 447
Query: 329 GRAG 332
+ G
Sbjct: 448 FKKG 451
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y E+LD+ P T+ +L+ Y G +E A ++F M+ + P+ I GL
Sbjct: 424 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 483
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G + ++F + P+ Y +I+ + K +A ++ EM P+
Sbjct: 484 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTV 543
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
TYT+L++ F + + A ++ ++ G++ D+ AY L++ A+ L++ +
Sbjct: 544 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 603
Query: 311 H-MGCEPDRASYNIMVDAY 328
G P+R YN M+ +
Sbjct: 604 RGAGLSPNRFIYNSMITGF 622
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD++N + L V+ L++ Y + + A E+ +S +P + T
Sbjct: 252 DDMVNCGKSMNL-----------AVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 300
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y++L+ C +G +EKA + EM+ G+ S NS ++G LK + Q A +F
Sbjct: 301 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-A 359
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ + T+ +++ K K A L++E+ + PN+ +Y ++ R+
Sbjct: 360 LESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 419
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A ++++++ G P+ + LM+ Y
Sbjct: 420 AACKVYKEMLDNGFTPNAVTFTILMDGY 447
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++ K A EL + P Y ++ + +E+A ++++M G
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 642
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+P Y S IDGLLK G A +I M P +T++IN + A
Sbjct: 643 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 702
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ +M P++ Y L+ +EG +EA + +++ G+ PD Y+ L+
Sbjct: 703 KILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 7/174 (4%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
++ Y++ + C+ A ++ REMR G P + S I +K GN +A+ +
Sbjct: 193 QEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKD 252
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M + T ++ Y AL L NE+ PN TY+ L++ + G
Sbjct: 253 DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 312
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDA 327
E+A E + +++ GI VY+ N+++E Y + C+ + ++ + DA
Sbjct: 313 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGY-------LKCQSWQNAFTMFNDA 359
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L +P + + +L+ C G E A + +M + PS ++YN+ I G K
Sbjct: 670 HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 729
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
GN Q+A + M P TY +++N K +F
Sbjct: 730 EGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNF 769
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+YN +D ++ GN +A + F + K + E Y++ ++L S AL L EM
Sbjct: 162 LYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREM 219
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
R+ P T+T+++ A +EG EA + + + G ++ +LM+ Y + +
Sbjct: 220 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 279
Query: 311 -----------HMGCEPDRASYNIMVDAYGRAG 332
G P++ +Y++++D + G
Sbjct: 280 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 312
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+K CM + +A +F M+K G P V Y + I GL GN A+++
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196
Query: 212 FQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLF----------NEMRSHKC 255
Q M D C+P+ TY ++++ K + A +LF NEM
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGL 256
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---- 311
+P++ T+ L++ +EG EA+++ + +GI PD+ YN+L+E + ++ ++
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316
Query: 312 -------MGCEPDRASYNIMVDAYGRA 331
GCEPD SYN++++ Y +
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKT 343
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + ++A Y E+L P TY LLK ++G ++ A+ +F M+ +
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ ++ Y ++DGL K +A+++F +K + E +I+ KA K A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF ++ + +PN+ TYT +++ F REG ++A + ++++ G PD+ YN LM
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
E +L+ RM PD + +I+VD +
Sbjct: 515 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+LD P T+ +L+ C G + +A+ + M + G+ P V YNS I+G G
Sbjct: 250 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 309
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A E+F M C+P +Y ++IN Y K K A+KL+NEM +PN+ TY
Sbjct: 310 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 369
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRMH-M 312
+L+ G ++A+++F ++ GI + Y Y + L EA +L + +
Sbjct: 370 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 429
Query: 313 GCEPDRASYNIMVDAYGRAG 332
+ + + N ++D +AG
Sbjct: 430 NFKLEIENLNCLIDGLCKAG 449
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE + A ++ + C P +Y +L+ Y + +E+A ++ EM G
Sbjct: 301 LIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 360
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ + Y+S + G+ G A ++F MK ++ TY + ++ K F A+
Sbjct: 361 KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAM 420
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF E++S K I L++ + G E A E+FE+L G EP+V Y ++ +
Sbjct: 421 KLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGF 480
Query: 305 ----------RLISRMHM-GCEPDRASYNIMVDAY 328
LI +M GC PD +YN ++ +
Sbjct: 481 CREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 515
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 19/204 (9%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
S IP+ + +C +G + A+ F M + PS +N + GL K +
Sbjct: 26 SSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHY 85
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ ++ +M+ T +++N ++ F + PNI TY L
Sbjct: 86 SQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTL 145
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------------EAYRLIS 308
+ E EA +F ++Q G PDV Y L+ E IS
Sbjct: 146 IKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDIS 205
Query: 309 RMHMGCEPDRASYNIMVDAYGRAG 332
R + C+P+ +YNI+VD + G
Sbjct: 206 RYEINCKPNVITYNIIVDGLCKVG 229
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ C +G LE A +F ++ G P+ V Y I G + G KA + Q+M+ +
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
C P TY ++ + +++K ++L + M P+ T + +V+ +++
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 553
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 44/88 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ +C G ++KA + ++M G P + YN+ + G + ++ V++
Sbjct: 468 PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 527
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
RM + P T ++++++ K K
Sbjct: 528 LHRMAQKDVSPDAITCSIVVDMLSKDEK 555
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C+P T+ ++ YC +G LE A AV+ +M G+ P+ V YN I+G K G+
Sbjct: 315 DGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLG 374
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AVE++Q+M R C P T++ +I+ Y + + AL+++++M H+ +PN+ T++ ++
Sbjct: 375 SAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIII 434
Query: 267 NAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAY---------RLISR--MHMGC 314
++ ++ +EA + +L I P + YN +++ LI + GC
Sbjct: 435 HSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGC 494
Query: 315 EPDRASYNIMVDAY 328
PD+ +Y I++ Y
Sbjct: 495 RPDKYTYTILIIGY 508
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + A Y +++ S +P TY +L+ Y G L A V+++M +
Sbjct: 328 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 387
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP V ++S IDG + G A+ I+ M + QP+ T++++I+ K ++S A+
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447
Query: 245 KLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L NE+ P Y +++ + G +EA I + ++ G PD Y Y L+
Sbjct: 448 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 507
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
Y + SR+ GC PD + N + +AG+
Sbjct: 508 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 548
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 157 YALLLKAYCMSGLLEKAEAVF-REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y L+ + G + A+F R ++ P +N I G+ + G QKA+E+ +RM
Sbjct: 218 YNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM 277
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGL 274
C P T T+ ++++ + ++ ++ + R C PN+ T+T++++ + + G
Sbjct: 278 NEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGK 337
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHMGCEPDRASY 321
E+A ++ + +GI P+ YN L+ E Y+ ++R+ C PD ++
Sbjct: 338 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR--CPPDVVTF 395
Query: 322 NIMVDAYGRAG 332
+ ++D Y R G
Sbjct: 396 SSLIDGYCRCG 406
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 1/179 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A Y ++ RC P T++ L+ YC G L+ A ++ +M ++
Sbjct: 362 VLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 421
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFM 242
+ P+ ++ I L K +A+ + + R P Y +I++ K K
Sbjct: 422 RIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 481
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A + M C+P+ TYT L+ + + EA F ++ AG PD N +
Sbjct: 482 ANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFI 540
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L+ + + LL+ + + + ++G A YN + L+ G V +
Sbjct: 178 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 237
Query: 212 FQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F+R +D P ++ ++I + + AL+L M C P+ T+ LV+
Sbjct: 238 FERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLC 297
Query: 271 REGLCEEAEEIFEQLQGAGI-EPDVYAYNALMEAY----RLISRMHM-------GCEPDR 318
R E+ +LQ G+ P+V + +++ Y +L M + G P+
Sbjct: 298 RTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNT 357
Query: 319 ASYNIMVDAYGRAG 332
+YN++++ YG+ G
Sbjct: 358 VTYNVLINGYGKVG 371
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H +E ++ C E T+ +L+ C +GL+ A VF +M +Y P V Y+S
Sbjct: 411 HDASELIA-QMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSS 469
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
++G + G + A+++F+ M C+P +Y ++ +A++ A +L EM
Sbjct: 470 LLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKD 526
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--- 311
C PN T+ L+N+ ++GL + A E+ EQ+ G PD++ YNAL+ + R+
Sbjct: 527 CPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDAL 586
Query: 312 -----MGCEPDRASYNIMVDAYGRA 331
M C+PD SYN + RA
Sbjct: 587 KLLSTMSCKPDAISYNSTLKGLCRA 611
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 103/194 (53%), Gaps = 15/194 (7%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+RC P E T+A ++++C +GLL++A + +M +YG P V+Y++ I+G + G+ +
Sbjct: 219 NRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQ 278
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+++ M C+P+T Y + A + +L EM C PN T++ L++
Sbjct: 279 ALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLIS 335
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPD 317
+ + L + A E+ EQ++ G EPD YN ++ +A RL++ M C+PD
Sbjct: 336 SLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLN--SMVCKPD 393
Query: 318 RASYNIMVDAYGRA 331
+N ++ + RA
Sbjct: 394 ALGFNAVLKGFCRA 407
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 46/233 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P E T+++L+ + C + L++ A V +M KYG P V YN I+ L + G
Sbjct: 317 EMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG 376
Query: 204 NPQKAV--------------------------------EIFQRMKRDCCQPSTETYTLMI 231
A+ E+ +M RD C T+ ++I
Sbjct: 377 RVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILI 436
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
++ + A ++F +M ++C P+I TY++L+N F+ +GL E A ++F + +
Sbjct: 437 DMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CK 493
Query: 292 PDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
PD+++YNA++ +A LI+ M C P+ ++NI++++ + GL
Sbjct: 494 PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGL 546
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Q L A + ++ RC P TY+ LL + GL+E A +FR M
Sbjct: 434 ILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM--- 490
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P YN+ + GL + + A E+ M C P+ T+ ++IN + A
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+++ +M ++ P+I TY AL+N F+ +G ++A ++ + +PD +YN+ +
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKG 607
Query: 302 --------EAYRLISRM-HMGCEPDRASY 321
+A L++ M C P+ ++
Sbjct: 608 LCRAERWQDAEELVAEMLRNKCTPNEVTF 636
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ------------LRLNKKWD 113
+ L ++Q+E I D F+ P T++ +N Q + + + D
Sbjct: 267 VEDALGYIQQE-----IADGFE---PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P V + + + GQ ++A+ +++D C+P T+ L+ A C LE+A
Sbjct: 319 PDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ R++ G+ P +N I+ L K G+P A+ +F+ MK C P TY +I+
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K AL L +M S C + TY +++ ++ EEAEE+F+Q+ GI +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+N L+ +A+ LI++M G +P+ +YN ++ Y + G
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ C T+ T +L+ YC G +E A ++ G P + YN++++GL + +
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ M ++ P TY +++N K + A + N+M C P+I T+
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ A EEA ++ Q+ G+ PDVY +N L+ A RL M + G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 314 CEPDRASYNIMVD 326
C PD +YN ++D
Sbjct: 422 CTPDEVTYNTLID 434
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ +S C P E TY L+ C G L KA + ++M G P S + YN+ IDGL K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M + T+ +I+ K K A +L N+M S +PN T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y +++ + ++G ++A +I E + G E DV Y L+ A +++ M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 312 M-GCEPDRASYNIMVDAYGR 330
+ G P +YN ++ + R
Sbjct: 594 IKGMRPTPKAYNPVLQSLFR 613
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
DLI +Q + D +V +++L+ + S K E Y E+ P T+
Sbjct: 130 DLILNQLQPLFGIQADTVVYNHLLNVLV-----EGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
L+KA C + + A + EM G+ P + + + G ++ G+ + A+ + RM
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
C + T ++IN Y K + AL + + +P+ TY VN +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVD 326
A ++ + + G +PDV+ YN ++ EA ++++M GC PD ++N ++
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 327 A 327
A
Sbjct: 365 A 365
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 13/213 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + Y +++ G L+ + + EMR+ G V +S++D AV++
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 212 F--QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
Q Q T Y ++N+ + SK + +++EM + KP++ T+ L+ A
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
R A + E++ G+ PD + LM+ + R+ +RM MGC +
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ N++++ Y + G E Y E++ P
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ C ++ A + +M GL P+ + YNS + K G+ +KA +I + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +IN KA ++ +ALK+ MR +P Y ++ + R
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+A +F ++ G PD Y + +R + R G P + +++ M++ + + E
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIV---FRGLCR---GGGPIKEAFDFMLEMVDKGFIPE 671
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L YC G ++KA + M G V Y + I+GL K G Q A+++
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +P+ + Y ++ + + AL LF EM P+ TY + R
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648
Query: 272 -EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G +EA + ++ G P+ ++ L E
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y +K + A + + D+ +PT+ T +++K C +G + +F +
Sbjct: 324 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 383
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ + YN+ IDG +K GN A +++ M PST TYT +I+ + K + +A
Sbjct: 384 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLA 443
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LKL N+M+ K +I Y L++ F + + A E+ +L+GAG+ P+ + YN+++
Sbjct: 444 LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG 503
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L +M + G D +Y ++D ++G
Sbjct: 504 FKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 543
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ +C ++ A + E+R GL P+ +YNS I G N ++A++++++M
Sbjct: 462 YGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 521
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +TYT +I+ K+ + A + EM S P+ +T L+N +G E
Sbjct: 522 NEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFE 581
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A +I E + G + P V YN L+ EA+RL M G PD +Y+I+V
Sbjct: 582 NARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641
Query: 326 DA 327
+
Sbjct: 642 NG 643
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ +C + A V++EM G P+AV + +DG K G+ + A I
Sbjct: 282 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSI 341
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RMK P+ T ++I KA +SF LFN+ S P Y +++ F +
Sbjct: 342 FHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK 401
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
EG A ++ ++ GI P Y +L++ + +L++ M G + D +
Sbjct: 402 EGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKA 461
Query: 321 YNIMVDAY 328
Y ++D +
Sbjct: 462 YGTLIDGF 469
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 12/184 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K YCM G L A + E+ + GL P+ V Y+ IDG K GN +KA E + MK
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+ S + ++ Y K A +FN+ N+ T+ L++ +EG EA
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEAC 269
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAY 328
+++++ GI P+V +YN ++ + ++ C+ P+ ++ I++D Y
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329
Query: 329 GRAG 332
+ G
Sbjct: 330 FKKG 333
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y E+LD+ P T+ +L+ Y G +E A ++F M+ + P+ I GL
Sbjct: 306 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 365
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G + ++F + P+ Y +I+ + K +A ++ EM P+
Sbjct: 366 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTV 425
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
TYT+L++ F + + A ++ ++ G++ D+ AY L++ A+ L++ +
Sbjct: 426 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 485
Query: 311 H-MGCEPDRASYNIMVDAY 328
G P+R YN M+ +
Sbjct: 486 RGAGLSPNRFIYNSMITGF 504
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD++N + L V+ L++ Y + + A E+ +S +P + T
Sbjct: 134 DDMVNCGKSMNL-----------AVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y++L+ C +G +EKA + EM+ G+ S NS ++G LK + Q A +F
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-A 241
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ + T+ +++ K K A L++E+ + PN+ +Y ++ R+
Sbjct: 242 LESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A ++++++ G P+ + LM+ Y
Sbjct: 302 AACKVYKEMLDNGFTPNAVTFTILMDGY 329
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++ K A EL + P Y ++ + +E+A ++++M G
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 524
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+P Y S IDGLLK G A +I M P +T++IN + A
Sbjct: 525 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 584
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ +M P++ Y L+ +EG +EA + +++ G+ PD Y+ L+
Sbjct: 585 KILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E+L +P + + +L+ C G E A + +M + PS ++YN+ I
Sbjct: 548 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 607
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G K GN Q+A + M P TY +++N K +F
Sbjct: 608 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNF 651
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +LL A + +A + +M G+ + + LK GN +A +
Sbjct: 3 PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F + K + E Y++ ++L S AL L EMR+ P T+T+++ A +
Sbjct: 63 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
EG EA + + + G ++ +LM+ Y + + G P++ +
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182
Query: 321 YNIMVDAYGRAG 332
Y++++D + G
Sbjct: 183 YSVLIDGCCKNG 194
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY ++ + C +++A + R + G+ P +NS I GL
Sbjct: 368 QMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSS 427
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N + A+++F+ MK C+P TY ++I+ + K AL L EM + C N+ Y
Sbjct: 428 NHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYN 487
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
L++ F + EEAEEIF++++ G+ D YN L+ +A +L+ +M M
Sbjct: 488 TLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME 547
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD+ +YN ++ + + G
Sbjct: 548 GLRPDKFTYNSLLTHFCKTG 567
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ C T+ T +L+ +C G +++A + +E G P YN+ ++GL K G
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + A+E+ M P TY +I+ K + A+K+ ++M S C PN TY
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 382
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
A++++ +E +EA EI L GI PDV +N+L++ A L M
Sbjct: 383 AIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442
Query: 313 GCEPDRASYNIMVDA 327
GC PD +YN+++D+
Sbjct: 443 GCRPDEFTYNMLIDS 457
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ +L+KA C + + A + EM YGL P + + + G ++GGN A+ I ++M
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C + T ++IN + K + AL E S +P+ TY LVN + G
Sbjct: 265 VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A E+ + + G++PD+Y YN+L+ EA +++ +M C P+ +YN +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384
Query: 325 VDA 327
+ +
Sbjct: 385 ISS 387
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 12/224 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ S HK A + E+ C P E TY +L+ + C S LE+A + +EM G
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V+YN+ IDG K ++A EIF M+ + TY +I+ K+ + A
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA 538
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L ++M +P+ TY +L+ F + G ++A +I + + +G PD+ Y L+
Sbjct: 539 QLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDA-YGRAGLHEG 336
A RL+ + M G +YN ++ A + R HE
Sbjct: 599 CKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEA 642
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 12/224 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDS-RCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
+ ++ +E+YG+ L+ + + D R P Y +LL + L+ E+
Sbjct: 134 IFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSS 193
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + + +N I L K + A+ + + M P T+T ++ Y +
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL++ +M + C T L+N F ++G ++A ++ G PD + YN
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ A ++ M + G +PD +YN ++ + G
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLG 357
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY LL +C +G ++KA + + M G P V Y + I GL K G Q A +
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL 610
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ ++ + Y +I K +++ A++LF EM P+ TY +
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCN 670
Query: 272 EG--LCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G + E + E ++ I P+ ++ L E
Sbjct: 671 GGGPIGEAVDFTVEMIERGNI-PEFSSFVMLAEG 703
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA + S C P TYA L+ C +G ++ A + R ++ G+ + YN
Sbjct: 570 KKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPV 629
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
I L K +A+ +F+ M P TY ++
Sbjct: 630 IQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 12/162 (7%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
PS+ VY + L K G+ + + + MK C+ + + + YGK + +
Sbjct: 95 PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154
Query: 247 FNEMRS-HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN----ALM 301
M ++ KP+ Y L+N + E + I DV +N AL
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214
Query: 302 EAYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEG 336
+A+++ + M G PD ++ ++ Y G +G
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDG 256
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 136 KKAEFTYLELL----DSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
K+AE LELL DS+ C P +YA ++ + G ++KA +F EM G+ P+
Sbjct: 179 KRAE-EALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPN 237
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V Y + IDGL K +A +FQ+M +P +TY +I+ Y K +++
Sbjct: 238 VVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLE 297
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL-- 306
EM +H KP+ TY +L+N G C EA F+ + GI+P+V Y L+ Y
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKG 357
Query: 307 -ISRMH--------MGCEPDRASYNIMVDAYGRAGL 333
+S MH G PD +NI+ AY + +
Sbjct: 358 ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + KA +LE++D P TY ++ C + ++++AE VF++M G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN I G L G ++ V + + M +P TY ++N + A
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+ M KPN+ Y L++ +A +G E ++ + G+ PD + +N + AY
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388
Query: 305 ----RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
+ MH+ G PD ++ ++DA + G
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLG 427
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ P TY++L+ +C G LE A F + K G + +V N + GL ++A
Sbjct: 89 KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148
Query: 209 VEIF-QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTA 264
++I +RM C P +Y ++ + ++ AL+L + M + C PN+ +Y
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISR--------MHMG 313
++N F EG ++A +F ++ GI+P+V Y +++ +++ R + G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +YN ++ Y G
Sbjct: 269 VKPDNDTYNCLIHGYLSIG 287
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y K + ++++ P + ++ AY ++++A +F +M++
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V + + ID L K G AV F +M + P+ + ++ K A
Sbjct: 408 GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + EM + +P++ + ++ +G +A+ + + ++ G PDV +Y L+
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGG 527
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ L+ R + +G +PD +YN ++ Y RAG
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY LL YC +G ++ A VFREM + G+ P V Y++ + GL +A E+
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M Q + Y +++N K + A KLF + S + I T+ ++ A +
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAY-----NALMEAY-----RLISRMH-MGCEPDRAS 320
G E+A +F + G+ PDV+ Y N + E Y L S M G P+
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSR- 729
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELS 346
M++A R LH G + + LS
Sbjct: 730 ---MLNALVRRLLHRGDITRAGAYLS 752
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + + +AE + +++D P DTY L+ Y G ++ + EM +G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S ++ L G ++A F M R +P+ Y ++I+ Y
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L N M + P+ + + A+A++ + +EA IF +++ G+ PDV + AL++A
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDAL 423
Query: 305 RLISR-----------MHMGCEPDRASYNIMV 325
+ R M+ G P+ +N +V
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 11/227 (4%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A F + ++ P Y +L+ Y G L + + M + GL P ++N
Sbjct: 325 REARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
K +A+ IF +MK+ P + +I+ K + A+ FN+M +
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
PNI + +LV E+A+E + ++ GI PDV +N + M+A R
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
LI M +G PD SY ++ + G + V LSV P
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKP 551
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++ AY +K++ +A + ++ P + L+ A C G ++ A F +M
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE 442
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFM 242
G+ P+ V+NS + GL +KA E + M +P + T++ NL K +
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG-QVMK 501
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +L + M +P++ +YT L+ G +EA + + + G++PD + YN L+
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561
Query: 303 AYRLISRMHMGCEPDRASYNIMVDAYG------RAGLHEGKCSYSLV 343
Y C R DAYG R G+ G +YS +
Sbjct: 562 GY---------CRAGRID-----DAYGVFREMLRNGITPGVVTYSTI 594
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + A + ++++ P + L+ C EKA+ + EM G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +N+ + L G KA + M+R +P +YT +I + + A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K + M S KP+ TY L++ + R G ++A +F ++ GI P V Y+ ++
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 19/224 (8%)
Query: 128 AYGQKSLHK--KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
YG ++ K KA+ Y E+L+ P + +L C G + KA+ + M + G
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + Y + I G G +A + M +P TY +++ Y +A + A
Sbjct: 515 RPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
+F EM + P + TY+ +++ EA+E++ + +G + +++ YN ++
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634
Query: 302 ------EAYRLISRMHMGCEPD----RASYNIMVDAYGRAGLHE 335
EA++L + C D ++NIM+ A ++G +E
Sbjct: 635 KNNCVDEAFKLFQSL---CSKDFQLEITTFNIMIGALFKSGRNE 675
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 237 ASKSFMALKLFNEMRSH---KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
++S + + LFN M K P++CTY+ L+ F R G E F + +G +
Sbjct: 69 TTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVN 128
Query: 294 VYAYNALM----EAYR-------LISRM-HMGCEPDRASYNIMVDAY 328
N L+ +A R LI RM +GC PD SYN ++ +
Sbjct: 129 NIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGF 175
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 28/298 (9%)
Query: 62 LSPTAQQILRFVQREVDSNTIWDAFDSLPPTHAT------WDDLINVSVQL--------- 106
++ A+ +L FV + F S+ T T +D L++V +
Sbjct: 125 MNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQC 184
Query: 107 -RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
RL KK + + + LL S EF YLE+LDS P T+ +L+ C
Sbjct: 185 FRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEF-YLEILDSGYPPNVYTFNVLMNRLC 243
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
G ++ A+ +F E+RK GL P+AV +N+ I+G K GN ++ + M+ P
Sbjct: 244 KEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVF 303
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY+ +I+ K + A LF EM PN T+T L+N + G + A EI++Q+
Sbjct: 304 TYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQM 363
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++ D+ YN L+ EA + + M G PD+ +Y ++D + G
Sbjct: 364 FTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEG 421
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 22/277 (7%)
Query: 78 DSNTIWDAF--DSLPPTHATWDDLIN-------VSVQLRLNKKWDPIVLMSCVSIL--LI 126
D+ I+D L PT +++ LIN + RL + + V LI
Sbjct: 250 DAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALI 309
Query: 127 EAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
+ ++ + A + E+ D +P + T+ L+ C +G ++ A ++++M GL
Sbjct: 310 DGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLK 369
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
V+YN+ IDGL KGG ++A + M + P TYT +++ K +AL++
Sbjct: 370 ADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEM 429
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---- 302
EM + + +TA+++ R+G +AE ++ AG++PD Y +M+
Sbjct: 430 RKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCK 489
Query: 303 ------AYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
++L+ M G P +YN++++ + G
Sbjct: 490 KGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ IP + TY LL C G LE A + +EM K G+ V + + I GL + G
Sbjct: 397 EMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDG 456
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A + M R +P TYT++++ + K M KL EM+S P + TY
Sbjct: 457 KIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYN 516
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HMGCE 315
L+N ++G + A+ + + G+ PD YN L++ + ++ MG
Sbjct: 517 VLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLV 576
Query: 316 PDRASYNIMVDAYGRA 331
D ASY ++ +A
Sbjct: 577 SDYASYRSLLHELSKA 592
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE T E+L + P + TY +++ +C G ++ + +EM+ G P + YN ++
Sbjct: 461 AERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMN 520
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
GL K G + A + M P TY +++ + K K
Sbjct: 521 GLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ------------LRLNKKWD 113
+ L ++Q+E I D F+ P T++ +N Q + + + D
Sbjct: 267 VEDALGYIQQE-----IADGFE---PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P V + + + GQ ++A+ +++D C+P T+ L+ A C LE+A
Sbjct: 319 PDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ R++ G+ P +N I+ L K G+P A+ +F+ MK C P TY +I+
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K AL L +M S C + TY +++ ++ EEAEE+F+Q+ GI +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+N L+ +A+ LI++M G +P+ +YN ++ Y + G
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ C T+ T +L+ YC G +E A ++ G P + YN++++GL + +
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ M ++ P TY +++N K + A + N+M C P+I T+
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ A EEA ++ Q+ G+ PDVY +N L+ A RL M + G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 314 CEPDRASYNIMVD 326
C PD +YN ++D
Sbjct: 422 CTPDEVTYNTLID 434
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ +S C P E TY L+ C G L KA + ++M G P S + YN+ IDGL K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M + T+ +I+ K K A +L N+M S +PN T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y +++ + ++G ++A +I E + G E DV Y L+ A +++ M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 312 M-GCEPDRASYNIMVDAYGR 330
+ G P +YN ++ + R
Sbjct: 594 IKGMRPTPKAYNPVLQSLFR 613
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
DLI +Q + D +V +++L+ + S K E Y E+ P T+
Sbjct: 130 DLILNQLQPLFGIQADTVVYNHLLNVLV-----EGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
L+KA C + + A + EM G+ P + + + G ++ G+ + A+ + RM
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
C + T ++IN Y K + AL + + +P+ TY VN +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 278 AEEIFEQLQGAGIEPDVYAYN----------ALMEAYRLISRM-HMGCEPDRASYNIMVD 326
A ++ + + G +PDV+ YN L EA ++++M GC PD ++N ++
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 327 A 327
A
Sbjct: 365 A 365
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 13/213 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + Y +++ G L+ + + EMR+ G V +S++D AV++
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 212 F--QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
Q Q T Y ++N+ + SK + +++EM + KP++ T+ L+ A
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
R A + E++ G+ PD + LM+ + R+ +RM MGC +
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ N++++ Y + G E Y E++ P
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ C ++ A + +M GL P+ + YNS + K G+ +KA +I + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +IN KA ++ +ALK+ MR +P Y ++ + R
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+A +F ++ G PD Y + +R + R G P + +++ M++ + + E
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIV---FRGLCR---GGGPIKEAFDFMLEMVDKGFIPE 671
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L YC G ++KA + M G V Y + I+GL K G Q A+++
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +P+ + Y ++ + + AL LF EM P+ TY + R
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648
Query: 272 -EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G +EA + ++ G P+ ++ L E
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 19/263 (7%)
Query: 81 TIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEF 140
+++D SL H DD + ++R + P +C ILL A ++ + F
Sbjct: 134 SVFDTLLSLLADHGLLDDAVRALARVR--QLRVPPNTRTCNHILLRLARNRQGGLVRRLF 191
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+L P T+ +++ C G L +A A+F M+ G P V YNS IDG
Sbjct: 192 EHLP------APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G ++ + M++ C TY +IN + K A F EM+ N+
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
T + V+AF +EGL EA ++F Q++ G+ P+ + Y +L+ +A L+ M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365
Query: 311 -HMGCEPDRASYNIMVDAYGRAG 332
H G P+ +Y +MVD + G
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEG 388
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 94/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ ++ E E+ S C TY L+ + G +EKA + F EM++ G
Sbjct: 240 LIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V ++++D K G ++A+++F +M+ P+ TYT +++ KA + A+
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 359
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +EM PN+ TYT +V+ +EG A+++ ++ AG++ + Y L+ +
Sbjct: 360 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGH 419
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
++A+ ++ L ++A + ++ +P E TY L+ C +G L+ A + EM GL
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P+ V Y +DGL K G A ++ M+R + + YT +I+ + S AL
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALD 430
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
L NEM++ + ++ Y L+ + +EA+ + ++ G+ P+ Y +M+A+
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFF 490
Query: 305 ------RLISRMH----MGCEPDRASYNIMVDAYGRAG 332
++ +H G +P+ +Y ++D +AG
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAG 528
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T + + A+C GL+ +A +F +MR G+ P+ Y S +DG K G A+ + M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TYT+M++ K K +A + + M K N YT L++
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E A ++ +++ G+E DV Y L+ EA L+ +M G P+ Y +
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTI 485
Query: 325 VDAYGRAG 332
+DA+ +AG
Sbjct: 486 MDAFFKAG 493
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ A+ +G +A A+ ++ GL P+ V Y + IDGL K G+ +A+
Sbjct: 477 PNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISH 536
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M+ P+ + YT +I+ + K A+ L NEM + YT+L++ +
Sbjct: 537 FDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMK 596
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRM-HMGCEPDRAS 320
+G + A + ++ G++ D+Y Y N + EA ++S M G PD+ +
Sbjct: 597 QGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTA 656
Query: 321 YNIMVDAYGRAG 332
YN ++ Y + G
Sbjct: 657 YNCLIRKYQKLG 668
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
DS P TY L+ C +G + +A + F +MR+ GL P+ VY + IDG K G+
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KAV + M YT +I+ + K A L +M + ++ YT +
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFI 626
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+ F + +EA + ++ G GI PD AYN L+ Y+ + M
Sbjct: 627 SGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 66/264 (25%)
Query: 139 EFTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAEAVFR 178
EFTY L+D C +P TY +++ C G + A+ V
Sbjct: 339 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLS 398
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--------------------- 217
M + G+ + ++Y + I G N ++A+++ MK
Sbjct: 399 LMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQ 458
Query: 218 -------------DC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
DC +P+T YT +++ + KA K A+ L +++ +PN+ TY
Sbjct: 459 KLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYC 518
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------- 312
AL++ + G EA F++++ G++P+V Y L++ + L +H+
Sbjct: 519 ALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578
Query: 313 GCEPDRASYNIMVDAYGRAGLHEG 336
G D+ Y ++D + + G +G
Sbjct: 579 GMSLDKVVYTSLIDGHMKQGDLQG 602
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
V+++ + L G AV R+++ P+T T ++ + + + +LF
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFE-- 192
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
H PN+ T+ +++ ++G EA +F +++ G PDV YN+L++ Y
Sbjct: 193 --HLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250
Query: 305 ----RLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
L+S M GC D +YN +++ + + G E SY
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSY 291
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY L+ Y + L++A VF EM++ G P V Y + ID K G
Sbjct: 402 QMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAG 461
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ +++RM+ P T TY+++IN GKA A LF EM H C PN+ TY
Sbjct: 462 FIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYN 521
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHM 312
++ A+ E A +++ +Q AG +PD Y+ +MEA +
Sbjct: 522 IMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQK 581
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 582 NWVPDEPVYGLLVDLWGKAG 601
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YG + K+A + E+ + C P TY L+ + +G ++ A ++++ M++ G
Sbjct: 418 LIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAG 477
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K GN A +F M C P+ TY +MI L KA MAL
Sbjct: 478 LSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMAL 537
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL+++M++ +P+ TY+ ++ A G EEAE +F ++Q PD Y L++ +
Sbjct: 538 KLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLW 597
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+ ++ G P+ + N ++ A+ R LH +Y+LV+
Sbjct: 598 GKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLR--LHRLPDAYNLVQ 646
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + ++ ++M +D CQP+ TY +I+ YG A+
Sbjct: 369 RQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYL 428
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL +FNEM+ C+P+ TY L++ A+ G + A +++++Q AG+ PD + Y+ +
Sbjct: 429 KEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVI 488
Query: 301 ME----------AYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
+ A+ L M GC P+ +YNIM+ + AG
Sbjct: 489 INCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGF 548
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V ++ H
Sbjct: 549 QPDKVTYSIVMEALGH 564
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + + E+++ C+P TY +++ + E A ++ +M+
Sbjct: 487 VIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNA 546
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M++ P Y L+++L+GKA A
Sbjct: 547 GFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKA 606
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M + PN+ T +L++AF R +A + + + G+ P + Y L+
Sbjct: 607 SEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLL 664
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 18/144 (12%)
Query: 204 NPQKAVEIFQRMKRDCCQP----STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+P A+ F ++R QP TYT M+ + G+A + KL +M C+PN+
Sbjct: 356 DPSVALGFFDWLRR---QPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNV 412
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
TY L++ + +EA +F ++Q G EPD Y L++ A + R
Sbjct: 413 VTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKR 472
Query: 310 MH-MGCEPDRASYNIMVDAYGRAG 332
M G PD +Y+++++ G+AG
Sbjct: 473 MQEAGLSPDTFTYSVIINCLGKAG 496
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++ ++ P + TY+++++A G LE+AE+VF EM++ P VY +D K
Sbjct: 540 YHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGK 599
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN +KA E +Q M P+ T +++ + + + A L M + +P++ T
Sbjct: 600 AGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQT 659
Query: 262 YTALVNAFAREGLCEEAE 279
YT L++ C EA+
Sbjct: 660 YTLLLSC------CTEAQ 671
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++EA G ++AE ++E+ +P E Y LL+ + +G +EKA ++ M
Sbjct: 557 IVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNA 616
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ NS + L+ A + Q M +PS +TYTL+++
Sbjct: 617 GLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLS 665
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A G KS H + + L+ R P TY L +C + +A + R+M + G
Sbjct: 169 LLDALG-KSRHASKAASLVRALERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESG 227
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-----DCCQPSTETYTLMINLYGKASK 239
+ P+ YN + G + G Q A F +MK+ + C+P +YT +I+ G A +
Sbjct: 228 VTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQ 287
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF+EM C P++ TY AL+ ++G E+A +F+ + P+V Y
Sbjct: 288 LDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTV 347
Query: 300 LM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
L+ A +L+ RM GCEP +YN+++ R EG+ +L
Sbjct: 348 LIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLI----RYSFEEGEIEKAL 397
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P +Y ++ ++G L+KA +F EM K G PS YN+ I + K GN +
Sbjct: 265 DESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVE 324
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV +F M R P+ TYT++I K A+KL M+ C+P + TY L+
Sbjct: 325 DAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLI 384
Query: 267 NAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEA 303
EG E+A +FE++ +G P+ YN ++ A
Sbjct: 385 RYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISA 422
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I G KA + E+ C P+ TY L++ C G +E A VF +M +
Sbjct: 278 IIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKD 337
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I GL G +A+++ +RMK + C+P +TY ++I + + AL
Sbjct: 338 YMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKAL 397
Query: 245 KLFNEM-RSHKCKPNICTYTALVNA-FAR---EGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
LF M + C PN TY +++A F R E + A + E ++ G P + N
Sbjct: 398 CLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVE-RGYLPRRFMLNR 456
Query: 300 LMEAYRL 306
++ L
Sbjct: 457 VLNGLML 463
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + + +KA + E++ + P +YA+L+ YC G + +A ++ EM +
Sbjct: 470 ILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRK 529
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ V N+ I G + G+ KA E +M + P + TY +IN + K A
Sbjct: 530 GIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKA 589
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L N+M + +P++ TY ++N F R+G +EAE I ++ GI+PD Y L+
Sbjct: 590 FFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649
Query: 304 Y 304
Y
Sbjct: 650 Y 650
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ +K L A + E+++ +P T+ L+ +C G + KA ++F M +
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN IDG K +KA E++ M P+ +Y +++N Y A
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L++EM KP + T ++ + R G +A+E ++ G+ PD YN L+
Sbjct: 521 RLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A+ LI++M G +PD +YN++++ + R G
Sbjct: 581 VKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQG 619
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ + +LI Y + + +A ++L+ C Y +L C LL A A+F
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFD 419
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM + G+ P + + I G K GN KA+ +F M + +P TY ++I+ + K +
Sbjct: 420 EMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTT 479
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ A +L+NEM S K PN +Y LVN + G EA +++++ GI+P + N
Sbjct: 480 EMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCN 539
Query: 299 ALMEAY--------------RLISRMHMGCEPDRASYNIMVDAY 328
+++ Y ++IS G PD +YN +++ +
Sbjct: 540 TVIKGYCRSGDLSKADEFLGKMISE---GVGPDSITYNTLINGF 580
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + ++L P +++ L+ +G L++A FR+M+ GL P V+Y I
Sbjct: 308 EAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILI 367
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+G + G +A+EI +M C Y ++N K A LF+EM
Sbjct: 368 NGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVV 427
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE- 315
P+ CT+T L++ +EG +A +F + I+PD+ YN L++ + + M E
Sbjct: 428 PDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANEL 487
Query: 316 ----------PDRASYNIMVDAYGRAGL 333
P+ SY I+V+ Y G
Sbjct: 488 WNEMISRKIFPNHISYAILVNGYCNLGF 515
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ AYC GLL +A V M GL P+ YN+ I+GL K G +A +F M
Sbjct: 222 TYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM 281
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P T TY ++ + + A +F++M P++ ++++L+ +R G
Sbjct: 282 LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHL 341
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
++A F ++ +G+ PD Y L+ EA + +M GC D +YN +
Sbjct: 342 DQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTI 401
Query: 325 VDA 327
++
Sbjct: 402 LNG 404
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AY ++ L +A F + + + + PT TY ++ C G +A+ VF EM
Sbjct: 226 LINAYCREGLLGEA-FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSI 284
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P YN+ + + N +A +IF M P +++ +I + + A
Sbjct: 285 GLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQA 344
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L F +M++ P+ YT L+N + R G+ EA EI +++ G DV AYN ++
Sbjct: 345 LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNG 404
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A L M G PD ++ ++ + + G
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEG 444
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
+ S C + LL+++Y + L + F+ +R+ G S NS + GL+K G
Sbjct: 107 MSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWV 166
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A E++ + R + + T +M+N K K +M +I TY L
Sbjct: 167 DLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTL 226
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGC 314
+NA+ REGL EA E+ + G G++P ++ YNA++ R + +G
Sbjct: 227 INAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGL 286
Query: 315 EPDRASYNIMV 325
PD +YN ++
Sbjct: 287 SPDTTTYNTLL 297
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ Y +A + E++ PT T ++K YC SG L KA+ +M
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE 564
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P ++ YN+ I+G +KG KA + +M+ QP TY +++N + + + A
Sbjct: 565 GVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEA 624
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ +M P+ TYT L+N + + +EA +++ G PD
Sbjct: 625 ELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +++ A C ++ + +M + G+ V YN+ I+ + G +A E+ M
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSM 246
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P+ TY +IN K + A +FNEM S P+ TY L+ R
Sbjct: 247 SGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNF 306
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
EA++IF + G+ PD+ ++++L+ +A M G PD Y I+
Sbjct: 307 LEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL 366
Query: 325 VDAYGRAGL 333
++ Y R G+
Sbjct: 367 INGYCRNGM 375
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +K KA + ++ +P TY++L+ ++C G +E A EM K G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS I G + GN +K + Q+M++D P T+ +I+ Y K A
Sbjct: 503 NLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAF 562
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+FN M +P+ TY ++N F+ +G ++A +F+ + +GIEPD Y Y +L+
Sbjct: 563 NVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGH 622
Query: 302 -------EAYRLISRM-HMGCEPD 317
+A++L M H G PD
Sbjct: 623 VTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + K+A Y E+ P +++ L+ + G ++ A A REM+
Sbjct: 267 ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V+Y I G + G+ +A+ + M C P TY ++N K + A
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
KL NEM P++CT+T L++ + R+G E A ++F+ L + PDV YN+L++
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
A L MH P+ +Y+I++D++ G
Sbjct: 447 MCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+L T + ++ RC+ P T+ +L+ A +G ++ A A+ M GL P V
Sbjct: 169 KTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIV 228
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YNS + GL K KA E+F+ M + P ++ ++I + + + A+K + EM
Sbjct: 229 TYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEM 288
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
+ P++ +++ L+ F+R G + A +++G G+ PD Y ++
Sbjct: 289 QHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSM 348
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA R+ M GC PD +YN +++
Sbjct: 349 SEALRVRDEMVGFGCLPDVVTYNTLLNG 376
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E+ + P T+ L+ YC G E A +F + + L P V YNS ID
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G+ + G+ KA E++ M P+ TY+++I+ + + + A +EM P
Sbjct: 446 GMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP 505
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---- 313
NI TY +++ + R G ++ ++ ++++ + PD+ +N L+ Y MH
Sbjct: 506 NIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 314 -------CEPDRASYNIMVDAYGRAG 332
PD +YN++++ + G
Sbjct: 566 NIMEKEMVRPDAVTYNMIINGFSEQG 591
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 89 LPPTHATWDDLINVSVQ----LRLNKKWDPI----VLMSCVSI-LLIEAYGQKSLHKKAE 139
L P T++ LI+ + + N+ WD + +L + ++ +LI+++ +K + A
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA- 491
Query: 140 FTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F +L E++ +P TY ++K YC SG ++K + ++MR+ + P + +N+ I G
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+K N A +F M+++ +P TY ++IN + + A ++F M +P+
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPD 611
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
TY +L+N G ++A ++ +++ G PD
Sbjct: 612 RYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C+P TY LL C L AE + EM + G+ P + + I G + G
Sbjct: 357 EMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQG 416
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N + A+++F + R +P TY +I+ + A +L+++M + + PN TY+
Sbjct: 417 NFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYS 476
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM- 312
L+++ +G E+A +++ G P++ YN++++ Y + + +M
Sbjct: 477 ILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD 536
Query: 313 GCEPDRASYNIMVDAY 328
PD ++N ++ Y
Sbjct: 537 NVFPDLITFNTLIHGY 552
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 11/224 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI Y ++ + A + LL R P TY L+ C G L KA ++ +
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDD 462
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + P+ + Y+ ID + G + A M + P+ TY +I Y ++
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGN 522
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ +MR P++ T+ L++ + +E A +F ++ + PD YN
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNM 582
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
++ + M G EPDR +Y +++ + AG
Sbjct: 583 IINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA+ + + P ++ +L+ +C G +++A ++EM+ + P V ++ I
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ G A + MK P YT++I + +A AL++ +EM C
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL 364
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------R 305
P++ TY L+N ++ +AE++ +++ G+ PD+ + L+ Y
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + PD +YN ++D R G
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKG 451
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +++ +YC + + A+ V EM K + P V +N ID + G+ A+ + M
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P TY ++ K + A ++F M P++ ++ L+ F R G
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
+EA + ++++Q + PDV +++ L+ + M +G PD Y ++
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338
Query: 325 VDAYGRAG 332
+ + RAG
Sbjct: 339 IGGFCRAG 346
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LLI Y Q ++A + LLD R +P + ALL +G A+ +R +
Sbjct: 92 LLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALL-AVLSRAGWPHLAQEAYRLVLS 150
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+A N + K A + M++ C P T+ ++I+ +A
Sbjct: 151 SDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDA 210
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A+ L + M + KP I TY +++ + ++A+E+F + + PDV ++N L+
Sbjct: 211 AIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIG 270
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA + M H PD S++ ++ + R G + +Y
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL S P + LL++ Y S +A FR + + +P A N+ + L + G
Sbjct: 78 LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGW 137
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P A E ++ + + + T +M++ Y K + A + +EM P++ T+
Sbjct: 138 PHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNV 197
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMH 311
L++A R G + A + + + G++P + YN+++ E +R + +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+ PD S+NI++ + R G
Sbjct: 258 VA--PDVRSFNILIGGFCRVG 276
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H +E ++ C E T+ +L+ C +GL+ A VF +M +Y P V Y+S
Sbjct: 228 HDASELIA-QMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSS 286
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
++G + G + A+++F+ M C+P +Y ++ +A++ A +L EM
Sbjct: 287 LLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKD 343
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--- 311
C PN T+ L+N+ ++GL + A E+ EQ+ G PD++ YNAL+ + R+
Sbjct: 344 CPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDAL 403
Query: 312 -----MGCEPDRASYNIMVDAYGRA 331
M C+PD SYN + RA
Sbjct: 404 KLLSTMSCKPDAISYNSTLKGLCRA 428
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 103/194 (53%), Gaps = 15/194 (7%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+RC P E T+A ++++C +GLL++A + +M +YG P V+Y++ I+G + G+ +
Sbjct: 36 NRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQ 95
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+++ M C+P+T Y + A + +L EM C PN T++ L++
Sbjct: 96 ALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLIS 152
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPD 317
+ + L + A E+ EQ++ G EPD YN ++ +A RL++ M C+PD
Sbjct: 153 SLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLN--SMVCKPD 210
Query: 318 RASYNIMVDAYGRA 331
+N ++ + RA
Sbjct: 211 ALGFNAVLKGFCRA 224
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 46/233 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P E T+++L+ + C + L++ A V +M KYG P V YN I+ L + G
Sbjct: 134 EMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG 193
Query: 204 NPQKAV--------------------------------EIFQRMKRDCCQPSTETYTLMI 231
A+ E+ +M RD C T+ ++I
Sbjct: 194 RVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILI 253
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
++ + A ++F +M ++C P+I TY++L+N F+ +GL E A ++F + +
Sbjct: 254 DMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CK 310
Query: 292 PDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
PD+++YNA++ +A LI+ M C P+ ++NI++++ + GL
Sbjct: 311 PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGL 363
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Q L A + ++ RC P TY+ LL + GL+E A +FR M
Sbjct: 251 ILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM--- 307
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P YN+ + GL + + A E+ M C P+ T+ ++IN + A
Sbjct: 308 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 367
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+++ +M ++ P+I TY AL+N F+ +G ++A ++ + +PD +YN+ +
Sbjct: 368 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKG 424
Query: 302 --------EAYRLISRM-HMGCEPDRASY 321
+A L++ M C P+ ++
Sbjct: 425 LCRAERWQDAEELVAEMLRNKCTPNEVTF 453
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 19/223 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
++++ + + K+AE + LLD + P + Y +++ Y +G EKA VF M
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+P S V YNS L+ K V +I+ +M+R QP +Y L+I YG+A +
Sbjct: 274 VGKGVPQSTVTYNS----LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 329
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL +F EM +P Y L++AFA G+ E+A+ +F+ ++ I PD+++Y
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 389
Query: 300 LMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRA 331
++ AY + R+ + G EP+ +Y ++ Y +A
Sbjct: 390 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 432
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++LI AYG+ AE L P +Y L+++Y G AEA+FR M+
Sbjct: 143 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---KRDCCQPSTETYTLMINLYGKASK 239
G PSA+ Y + ++G ++A E+F+ + K+ +P + Y +MI +Y KA
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K+F+ M + TY +L++ E +E +I++Q+Q + I+PDV +Y
Sbjct: 263 YEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
L++AY R + G P +YNI++DA+ +G+ E
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 366
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 96/178 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG+ ++A + E+LD+ PT Y +LL A+ +SG++E+A+ VF+ MR+
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y + + + + + A + F+R+K D +P+ TY +I Y KA+
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++++ +MR K N T +++A R A +++++ G+ PD A N L+
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ S P +YALL+KAY + E+A +VF EM G+ P+ YN
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD P +YT M++ Y AS A K F ++
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+PNI TY L+ +A+ E+ E++E+++ +GI+ + +M+A
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E + +L+ AY G AE V + K G P+ + Y + ++ +GG A IF
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---CKPNICTYTALVNAF 269
+RM+ +PS TY +++ + + K A ++F + K KP+ Y ++ +
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---AYRLISRMH-----MGCEPDRASY 321
+ G E+A ++F + G G+ YN+LM +Y+ +S+++ +PD SY
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSY 317
Query: 322 NIMVDAYGRAGLHEGKCS 339
+++ AYGRA E S
Sbjct: 318 ALLIKAYGRARREEEALS 335
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P TY+ L+ +CM L++A+ +F M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ I G K + +E+F+ M + +T TYT +I+ + +A + A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+F +M S P+I TY+ L++ G E A +FE LQ + +EPD+Y YN ++E
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G +P+ +Y M+ + R GL E
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 17/196 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +++ C G ++ A ++ ++M + + P V+YN+ ID L N A+
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 210 EIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+F M +P+ TY +I YG+ S A +L ++M K PN+ T++AL+
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD---ASRLLSDMIERKINPNVVTFSALI 333
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCE 315
+AF +EG EAE++++++ I+PD++ Y++L+ + RL HM C
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 316 PDRASYNIMVDAYGRA 331
P+ +YN ++ + +A
Sbjct: 394 PNVVTYNTLIKGFCKA 409
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 27/280 (9%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
NTI DA + +D +N+ ++ NK P V+ I + YG+ S A
Sbjct: 260 NTIIDAL----CNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWS---DAS 311
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
++++ + P T++ L+ A+ G L +AE ++ EM K + P Y+S I+G
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+A +F+ M C P+ TY +I + KA + ++LF EM N
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRL 306
TYT L++ F + C+ A+ +F+Q+ G+ PD+ Y+ L++ +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAGLHEGK----CSYSL 342
+ R M EPD +YNIM++ +AG E CS SL
Sbjct: 492 LQRSKM--EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + + + A+ VF++M G+ P + Y+ +DGL G + A+ +F+ +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P TY +MI KA K LF + KPN+ TYT +++ F R+GL
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EEA+ +F +++ G PD YN L+ A+
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAH 581
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T LL +C + A ++ +M + G P + +N+ I GL + +AV +
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM CQP TY +++N K +AL L +M K +P + Y +++A
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+A +F ++ GI P+V YN+L+ +A RL+S M P+ +
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 329 FSALIDAFVKEG 340
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 14/189 (7%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ +C L A AV +M K G P V NS ++G G AV + +M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
QP + T+ +I+ + +++ A+ L + M C+P++ TY +VN + G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A + ++++ IEP V YN ++ +A L + M + G P+ +YN +
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 325 VDA---YGR 330
+ YGR
Sbjct: 298 IRCLCNYGR 306
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL KK E +E P Y ++ A C + A +F EM G+ P+ V Y
Sbjct: 242 SLLKKMEQGKIE-------PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
NS I L G A + M P+ T++ +I+ + K K A KL++EM
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM 312
P+I TY++L+N F +EA+ +FE + P+V YN L++ + R+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 313 GCE 315
G E
Sbjct: 415 GME 417
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + Q A+ + +++ +P TY++LL C +G +E A VF +++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN I+G+ K G + ++F + +P+ TYT M++ + + A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
LF EM+ P+ TY L+ A R+G + E+ +++
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A +F +M K PS V ++ + + K + + ++M+ + TY++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + S+ +AL + +M +P+I T +L+N F +A + Q+ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 290 IEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+PD + +N L+ EA L+ RM + GC+PD +Y I+V+ + G
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ +C GL E+A+A+FREM++ G P + YN+ I L+ G+ + E+
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 212 FQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
+ M+ T L+ N+ G+ KSF+ +
Sbjct: 594 IREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKM 628
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F YL+ S+ P TY ++++ C +G +E +F + G+ P+ V Y + + G
Sbjct: 489 FEYLQ--RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ G ++A +F+ MK + P + TY +I + + + +L EMRS
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 125/291 (42%), Gaps = 50/291 (17%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
DSL + W+ I S + +D +V C + LI+ + +AE + L
Sbjct: 234 DSLFKAGSAWESFIYQSQMIVCGVSFDLVV---CTT--LIDGLFKAGKSDEAEAMFCTLA 288
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
CIP TY ++ YC G ++ AE++ R+M K + P+ V Y+S I+G K G
Sbjct: 289 KLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLD 348
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV I ++M P+ Y +I+ + KA K A+ L+NEM+ + + N A +
Sbjct: 349 VAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFI 408
Query: 267 NAFAR-------EGLCE----------------------------EAEEIFEQLQGAGIE 291
N R EGLC+ A + E++ GI+
Sbjct: 409 NNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIK 468
Query: 292 PDVYAYNALMEAYRLISRM----------HMGCEPDRASYNIMVDAYGRAG 332
DV AYN L+ + + +G PDRA+YN M++AY + G
Sbjct: 469 FDVVAYNVLINGLLRLGKYDAESVYSGIRELGLAPDRATYNTMINAYCKQG 519
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY ++ +A Y E++ +P TY+ ++ C G+L +A+A+ REM K G
Sbjct: 162 LISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMG 221
Query: 185 LPPSAVVY-----------------------------------NSYIDGLLKGGNPQKAV 209
+ P+ VVY + IDGL K G +A
Sbjct: 222 VNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAE 281
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F + + C P+ TYT MI+ Y K A L +M + PN+ TY++++N +
Sbjct: 282 AMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGY 341
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++G+ + A I +++ I P+ Y Y L++ +
Sbjct: 342 TKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGH 376
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 46/241 (19%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y + + P TY ++ AYC G LE A ++ EM+ + + P+++ N +
Sbjct: 489 AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVG 548
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL----------- 246
GL K G ++A+++ M P+ + ++N K ++ L++
Sbjct: 549 GLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKA 608
Query: 247 ------------------------FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
N M + TY AL++ + E+A +
Sbjct: 609 NREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATY 668
Query: 283 EQLQGAGIEPDVYAYN----------ALMEAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
Q+ G+ P + YN + +AY ++S+M G +PD + YN ++ +G+
Sbjct: 669 TQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKI 728
Query: 332 G 332
G
Sbjct: 729 G 729
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + S +KA TY ++L+ P TY LLL +GL+ KA + +M+ G
Sbjct: 651 LIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSG 710
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P A +YN+ I G K GN ++A++ + M P T TY ++I + K K A
Sbjct: 711 LDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQAR 770
Query: 245 KLFNEMRSHKCKPNICTYTALV------------NAFAREGLCEEAEEIFEQLQGAGIEP 292
+L NEM+ + PN TY L+ + +++ EA +F ++ G P
Sbjct: 771 ELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVP 830
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + S +EKA A + +M G+ P YN + GLL G KA EI +M
Sbjct: 647 TYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKM 706
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P Y +I+ +GK A+K + EM + P TY L+ FA+ G
Sbjct: 707 KDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKM 766
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS 320
++A E+ ++Q + P+ Y+ L+ + +S+ E DR S
Sbjct: 767 DQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQP---ELDRIS 808
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+ Y L+ C G+ ++A V M K G+ V YN+ I G K + +KA+ + +
Sbjct: 611 EVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQ 670
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + P TY L++ A A ++ ++M+ P+ Y L++ + G
Sbjct: 671 MLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGN 730
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNI 323
+EA + + ++ G+ P YN L+E + + +M E P+ ++Y+I
Sbjct: 731 KKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDI 790
Query: 324 MV 325
++
Sbjct: 791 LI 792
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 27/286 (9%)
Query: 89 LPPTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
L P AT++ +IN +++L K ++ S +L+ + ++A
Sbjct: 501 LAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAI 560
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY---GLPPSAVVYNSYI 196
E+L P + LL A E+A+ + + ++ GL + VYNS I
Sbjct: 561 DVLNEMLLWGICPNVTIHRALLNA---CSKCERADTILQMHKRLVGMGLKANREVYNSLI 617
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
L G ++A + M ++ T TY +I+ + K+S AL + +M +
Sbjct: 618 TVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVS 677
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P I TY L+ GL +A EI +++ +G++PD YN L+ EA +
Sbjct: 678 PGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKF 737
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
M G P ++YN++++ + + G + + L E+ V+ P
Sbjct: 738 YCEMVTKGLVPKTSTYNVLIEDFAKVGKMD-QARELLNEMQVRRVP 782
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 22/227 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + L + Y E+L +P T+ +L+ A+C G L A + R +
Sbjct: 17 LIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVD--- 73
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINL-------YGK 236
+ V YN+ I G + G + M K+D S L+ YG+
Sbjct: 74 IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGE 133
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ + ++ + +PN+ TYT L++A+ ++ EA ++E++ G PDV
Sbjct: 134 WVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVT 193
Query: 297 YNA----------LMEAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
Y++ L EA L+ M MG P+ Y I+VD+ +AG
Sbjct: 194 YSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG 240
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 19/200 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREM--------RKYGLPPSAVVYNSYIDGLLKGGNPQK 207
T +L+K +C G ++ E V + L P+ V Y + I K +
Sbjct: 115 TCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSE 174
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ +++ M D P TY+ +IN K A L EM PN Y LV+
Sbjct: 175 ALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVD 234
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEP 316
+ + G E+ Q+ G+ D+ L++ + + C P
Sbjct: 235 SLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIP 294
Query: 317 DRASYNIMVDAYGRAGLHEG 336
+ +Y M+D Y + G +G
Sbjct: 295 NNITYTAMIDGYCKLGDMDG 314
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 12/151 (7%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
DS P Y L+ + G ++A + EM GL P YN I+ K G
Sbjct: 708 DSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMD 767
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMI----NL--------YGKASKSFMALKLFNEMRSHK 254
+A E+ M+ P++ TY ++I NL K + A LF EM
Sbjct: 768 QARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKG 827
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
P T + + FAR G+ +A+ + + +
Sbjct: 828 FVPCENTLACISSTFARPGMVVDAKHMLKDM 858
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K++ K E + ++SR P TY++LL+ + + L K V+ EM G P V
Sbjct: 184 KNVRKAQEI--FDKMNSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVT 241
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y +D L K G ++AV + Q M CQP+T Y+++++ YG + A+ F +M
Sbjct: 242 YGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDME 301
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
P+I Y ALV+AF + E A + ++G GI + +N ++
Sbjct: 302 KDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDD 361
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
EAY++ RM C+PD +Y +M+ + C VE+++K
Sbjct: 362 EAYKVFRRMIKCCQPDCDTYTMMIKMF---------CENDKVEMALK 399
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 12/188 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T+ ++++ Y + +++A F M KYG+ P+ +NS + L K N +KA EIF +
Sbjct: 136 ETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDK 195
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M P +TY++++ +G+A ++++EM C+P+I TY +V++ + G
Sbjct: 196 MNSR-FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGR 254
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
EEA + + + G +P Y Y+ L+ Y + R+ G PD YN
Sbjct: 255 VEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNA 314
Query: 324 MVDAYGRA 331
+V A+ +A
Sbjct: 315 LVSAFCKA 322
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG + + A T+L++ +P Y L+ A+C + E A V +M +
Sbjct: 279 VLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGH 338
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ ++ +N ++ L+ G +A ++F+RM + CCQP +TYT+MI ++ + K MA
Sbjct: 339 GITTNSRTWNIILNHLISLGRDDEAYKVFRRMIK-CCQPDCDTYTMMIKMFCENDKVEMA 397
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
LK++ MR + P++ T++ L+N + +A + E + GI P
Sbjct: 398 LKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRP 446
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
R ++ G + Y++ + L K Q ++ M+R+ + ET+ +++ Y +A
Sbjct: 90 RRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGA-VNVETFGIIMRKYARA 148
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
K A+ FN M + PN+ + +L+ A + +A+EIF+++ + PD Y
Sbjct: 149 QKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMN-SRFSPDAKTY 207
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ L+E + + S M GCEPD +Y IMVD+ + G E
Sbjct: 208 SILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVE 256
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++C G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGDLETAFEY 333
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L LN+ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++ ++ Y +
Sbjct: 328 ETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M P TY +I YG K + A L +EM KP+ TYT L++
Sbjct: 264 YKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG E A E + + I D AY AL+ +A +++ M +G + +
Sbjct: 322 CKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEI 381
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 382 GTYTMIINEFCKKG 395
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 35/155 (22%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRD---------------CCQPSTE--------------------T 226
G+ + A E + M ++ CQ T
Sbjct: 324 EGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGT 383
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
YT++IN + K + KL EM+ P++ T
Sbjct: 384 YTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L+ PT TY LL G +E AE +F EM YG P+ +YN ++G
Sbjct: 869 YYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRL 928
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN +K E+FQ M P ++YT++I A + +L F ++ +P++ T
Sbjct: 929 AGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLIT 988
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-M 310
Y L++ R G EEA +F ++ +GI P++Y YN+L+ EA ++ +
Sbjct: 989 YNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELL 1048
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G +P+ +YN ++ Y +G
Sbjct: 1049 KNGWKPNVFTYNALIGGYSVSG 1070
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A C G +++A VF +M++ G+ P YNS I G LK A+E+F M
Sbjct: 359 YTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMN 418
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ TY L IN YGK+ +S A+K + M+S P++ A++ + A+ G
Sbjct: 419 IHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLG 478
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A+ +F +L+ G+ PD Y ++ EA ++ S M C PD + N ++
Sbjct: 479 MAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLI 538
Query: 326 DAYGRAG 332
D +AG
Sbjct: 539 DTLYKAG 545
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 11/226 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++L AE + E+ C P E TY L+L A S +E V +EM G
Sbjct: 782 LICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKG 841
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN+ I GL+K +A++++ ++ + P+ TY +++ K K A
Sbjct: 842 YESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAE 901
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF+EM + CKPN Y L+N + G E+ E+F+ + GI PD+ +Y L+ A
Sbjct: 902 DLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGAL 961
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCS 339
R++ +G EPD +YN+++ GR+G E S
Sbjct: 962 CTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVS 1007
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE + E+LD C P Y +LL Y ++G EK +F+ M G+ P Y
Sbjct: 898 EDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVL 957
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I L G ++ F+++ +P TY L+I+ G++ + A+ LFN+M
Sbjct: 958 IGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGI 1017
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL--------I 307
PN+ TY +L+ +EG EA +++E+L G +P+V+ YNAL+ Y +
Sbjct: 1018 APNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFA 1077
Query: 308 SRMHM---GCEPDRASY 321
S M GC P+ ++Y
Sbjct: 1078 SYGQMIVGGCPPNSSTY 1094
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+G++ + + + E+ D P +Y + ++ +G E+A + ++M
Sbjct: 222 VLMLAFGKRDV-ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDE 280
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V I L G A ++F +MK +P TY +++ G S
Sbjct: 281 GCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSV 340
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++++N M++ N+ YTA+V+A + G +EA ++F+Q++ GIEP Y+YN+L+
Sbjct: 341 IEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISG 400
Query: 304 YRLISRM--------HM---GCEPDRASYNIMVDAYGRAG 332
+ R+ HM G P+ +Y + ++ YG++G
Sbjct: 401 FLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSG 440
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L I YG+ KA Y EL+ S+ I P +L + SG L A+ VF E++
Sbjct: 430 VLFINYYGKSGESLKAIKRY-ELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELK 488
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P + Y I K N +A+++F M C P +I+ KA +
Sbjct: 489 SIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGN 548
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A K+F+E++ P CTY L+ REG +E + E++ P++ YN ++
Sbjct: 549 EAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVL 608
Query: 302 E----------AYRLISRMHM-GCEPDRASYN 322
+ A ++ M M GC PD +SYN
Sbjct: 609 DCLCKNGEVNYALGMLYNMTMKGCMPDLSSYN 640
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ Y +K + ++D P +Y +L+ A C +G L + + FR++ +
Sbjct: 921 ILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTEL 980
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + YN I GL + G ++AV +F M++ P+ TY +I GK K+ A
Sbjct: 981 GLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEA 1040
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
K++ E+ + KPN+ TY AL+ ++ G + A + Q+ G P+ Y L
Sbjct: 1041 GKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ L++ AE +F EM++ G P YN +D + K + +++ + M
Sbjct: 778 SYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEM 837
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +I+ K+ + A+ L+ ++ S P CTY L++ ++G
Sbjct: 838 HCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKI 897
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
E+AE++F+++ G +P+ YN L+ YRL CE PD SY ++
Sbjct: 898 EDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVL 957
Query: 325 VDAYGRAGLHEGKCSY--SLVELSVK 348
+ A AG SY L EL ++
Sbjct: 958 IGALCTAGRLNDSLSYFRQLTELGLE 983
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 31/304 (10%)
Query: 55 VDGIFPVLSPTAQQILRFVQREVDSNTIWDAFD----SLPPTHATWDDLINVSVQLR--- 107
DGI P + + +L F +R+V++ +W + + P ++ I V Q
Sbjct: 210 TDGIVPSVRTYSVLMLAFGKRDVET-VVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFE 268
Query: 108 -----LNKKWD----PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYA 158
L K D P V+ + V I ++ G+ S A+ + ++ S P TY
Sbjct: 269 EAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVS---DAKDVFWKMKASDQKPDRVTYI 325
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
LL +G ++ M+ G + V Y + +D L + G +A ++F +MK+
Sbjct: 326 TLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQK 385
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+P +Y +I+ + KA + AL+LFN M H PN TY +N + + G +A
Sbjct: 386 GIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKA 445
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDA 327
+ +E ++ GI PDV A NA++ + R+ M G PD +Y +M+
Sbjct: 446 IKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKC 505
Query: 328 YGRA 331
+A
Sbjct: 506 CSKA 509
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L + Y SG KA + M+ G+ P V N+ + L K G A +
Sbjct: 424 PNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRV 483
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K P TYT+MI KAS + A+K+F+EM +C P++ +L++ +
Sbjct: 484 FHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYK 543
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC-EPDRAS 320
G EA +IF +L+ ++P YN L+ E L+ M+ P+ +
Sbjct: 544 AGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLIT 603
Query: 321 YNIMVDAYGRAG 332
YN ++D + G
Sbjct: 604 YNTVLDCLCKNG 615
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ + ++ M G L A M++ G+ ++ YN I L+K G ++A+E+++ M
Sbjct: 149 TFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVM 208
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D PS TY++++ +GK + L EM H KPN+ +YT + + G
Sbjct: 209 ATDGIVPSVRTYSVLMLAFGKRDVETVVW-LLREMEDHGVKPNVYSYTICIRVLGQAGRF 267
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGCE-PDRASYNIM 324
EEA +I ++++ G +PDV L++ A + +M + PDR +Y +
Sbjct: 268 EEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITL 327
Query: 325 VDAYGRAG 332
+D G G
Sbjct: 328 LDKCGDNG 335
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + EL P TY +++K + ++A VF EM + P + NS ID
Sbjct: 480 AKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLID 539
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L K G +A +IF +K P+ TY ++ G+ K + L EM S+ P
Sbjct: 540 TLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPP 599
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLI 307
N+ TY +++ + G A + + G PD+ +YN L EA+R+
Sbjct: 600 NLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIF 659
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAGL 333
+M PD + ++ ++ + GL
Sbjct: 660 CQMKKVLAPDYTTLCTILPSFVKNGL 685
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 104/225 (46%), Gaps = 14/225 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + S +A + E++++RC+P L+ +G +A +F E+++
Sbjct: 501 MMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEM 560
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN+ + GL + G ++ + + + M + P+ TY +++ K + A
Sbjct: 561 NLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYA 620
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV--------- 294
L + M C P++ +Y ++ +E EA IF Q++ + PD
Sbjct: 621 LGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPS 679
Query: 295 YAYNALM-EAYRLISR--MHMGCEPDRASYN-IMVDAYGRAGLHE 335
+ N LM EA + + G + DR+S++ +M RAG+ +
Sbjct: 680 FVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEK 724
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL+ SG LE+A ++F +M K G+ P+ YNS I L K G +A ++
Sbjct: 984 PDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKM 1043
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ + ++ +P+ TY +I Y + + A + +M C PN TY L N
Sbjct: 1044 YEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQL 1101
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 98/258 (37%), Gaps = 46/258 (17%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C L+ G++ K+ E+ + P TY +L C +G + A +
Sbjct: 567 CTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYN 626
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY----- 234
M G P YN+ + GL+K +A IF +MK+ T T++ +
Sbjct: 627 MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLM 686
Query: 235 ---------------GKASKSFM------ALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
KA +S LK +S + NI L++ F
Sbjct: 687 NEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSP 746
Query: 274 LCE---------EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L EA E+ ++ + G+ +YNAL+ A L S M +G
Sbjct: 747 LIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLG 806
Query: 314 CEPDRASYNIMVDAYGRA 331
C+PD +YN+++DA G++
Sbjct: 807 CDPDEFTYNLILDAMGKS 824
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 10/143 (6%)
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G + ++F M+R + + T+ + G A M+ N TY
Sbjct: 126 GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTY 185
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR---------LISRMH-M 312
L+ + G EA E+++ + GI P V Y+ LM A+ L+ M
Sbjct: 186 NGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREMEDH 245
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G +P+ SY I + G+AG E
Sbjct: 246 GVKPNVYSYTICIRVLGQAGRFE 268
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 204 NPQKAVEIFQRMKRDCCQP----STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+P +A+++F+ + + QP +TE+ M+ L + ++F+ M+ K N+
Sbjct: 91 DPAEALQLFKSVAQ---QPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANV 147
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRL 306
T+ + + EG A ++ AGI + Y YN L ME Y++
Sbjct: 148 GTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKV 207
Query: 307 ISRMHMGCEPDRASYNIMVDAYGR 330
++ G P +Y++++ A+G+
Sbjct: 208 MAT--DGIVPSVRTYSVLMLAFGK 229
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI G+ ++A + ++ S P TY L+ G +A ++ E+ K
Sbjct: 991 LLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKN 1050
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
G P+ YN+ I G G+ A + +M C P++ TY + N
Sbjct: 1051 GWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPN 1099
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+ A+C G +++ + VF M K G+ P+ V YNS +DG KA I
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + P ++Y++MIN + K K A+ LF EM P++ TY++L++ ++
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G A ++ +Q+ G+ P++ YN++++A L+++ G +PD ++
Sbjct: 413 SGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 321 YNIMVDAYGRAG 332
Y+I++ ++G
Sbjct: 473 YSILIKGLCQSG 484
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + Q L A + ++L +P T+ L K C+ G +++A ++
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + Y + I GL K G + A+++ QR+ + QP+ Y +I+ K A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF+EM S P++ TY+AL++ F G ++A ++F ++ I+PDVY +N L+ A
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA 304
Query: 304 Y---------RLISRMHM--GCEPDRASYNIMVDAY 328
+ + + M M G +P+ +YN ++D Y
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y++++ +C ++A +F+EM + + P V Y+S IDGL K G A+++
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M P+ TY +++ K + A+ L + + +P+I TY+ L+ +
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G E+A ++FE L G DVYAY ++ EA L+S+M GC PD +
Sbjct: 483 SGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Query: 321 YNIMV 325
Y I++
Sbjct: 543 YEIII 547
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ C G A + + + + P+ V+YN+ ID + K +A ++F M
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P TY+ +I+ + K A+ LFN+M KP++ T+ LVNAF ++G
Sbjct: 252 VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
+E + +F+ + GI+P+ YN+LM+ Y L+ ++ G PD SY+IM
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371
Query: 325 VDAY 328
++ +
Sbjct: 372 INGF 375
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 16/218 (7%)
Query: 137 KAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A L+ +D + P Y ++ + C L+ +A +F EM G+ P V Y++
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G G + A+++F +M + +P T+ +++N + K K +F+ M
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
KPN TY +L++ + +A+ IF + G+ PD+ +Y+ ++ EA
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
L MH PD +Y+ ++D ++ G+ SY+L
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKS----GRISYAL 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I++ + L +A + E++ P TY+ L+ +C+ G L+ A +F +M
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P +N ++ K G ++ +F M + +P+ TY +++ Y + A
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+FN M P+I +Y+ ++N F + +EA +F+++ I PDV Y++L++
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 303 --------AYRLISRMH-MGCEPDRASYNIMVDA 327
A +L+ +MH G P+ +YN ++DA
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNICTYNSILDA 444
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + +A + E+ IP TY+ L+ SG + A + +M
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+PP+ YNS +D L K KA+ + + K QP TY+++I ++ K A
Sbjct: 430 GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDA 489
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+F ++ ++ YT ++ F EGL EA + +++ G PD Y ++
Sbjct: 490 RKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+K C SG LE A VF ++ G Y I G G +A+ +
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALAL 527
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+M+ + C P +TY ++I K ++ MA KL EM
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A ++F + + P A +N + L+K + + + Q+M+ +P+ +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + A +F ++ P+ T+T L +G ++A +++ G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 290 IEPDVYAYNALME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
D +Y L+ A L+ R+ +P+ YN ++D+ + L
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+L+ SR C P ++ L+ A SG + A+ E+R+ G+ P + YN+ I
Sbjct: 277 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 336
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N ++AV+++ M CQP TY MI++YG+ S A +LF ++ S P+
Sbjct: 337 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 396
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
TY +L+ AFAREG ++ +EI E + G D YN ++ A++L S
Sbjct: 397 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 456
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGL 333
M + G PD +Y +++D+ G+A +
Sbjct: 457 MKLSGRSPDAVTYTVLIDSLGKANM 481
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++S ++A Y +++ RC P TY ++ Y G+ +A +F+++ G
Sbjct: 332 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + + GN K EI + M + TY +I++YGK + +A
Sbjct: 392 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+++M+ P+ TYT L+++ + + +EA E+ ++ A ++P + ++AL+ Y
Sbjct: 452 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGY 511
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGR 330
+ + G +PD +Y++M+D R
Sbjct: 512 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 548
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEAYG+ L +KAE L + + L+ AY SG E+A A+F M + G
Sbjct: 785 VIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDG 844
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ N + L+ G + + Q ++ + S + TLM++ + A F
Sbjct: 845 PSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVK 904
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K++ M++ P + Y ++ A+ + E + +++ A +PD+ +N+++
Sbjct: 905 KIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLY 964
Query: 302 ----------EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
+ Y+LI G +PD +YN ++ Y R
Sbjct: 965 TGIGDFKKTGQVYQLIQ--EAGLKPDEDTYNTLILMYCR 1001
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KK Y + ++ P EDTY L+ YC E+ ++ EMR+ GL P Y S
Sbjct: 971 KKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 1030
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I K ++A E+F+ + C+ Y +M+ ++ + A KL M+
Sbjct: 1031 ISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGV 1090
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------- 304
+P I T L+ +++ G EEAE++ + L+ G+ Y+++++AY
Sbjct: 1091 EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQ 1150
Query: 305 RLISRMHMGCEPDRASYNIMVDA 327
+L+ G EPD + V A
Sbjct: 1151 KLMEMKKDGLEPDHRIWTCFVRA 1173
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK--SFMALKLFN 248
VYN+ + + G K E+ M+ C+P ++ +IN K+ + +A++L N
Sbjct: 256 VYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLN 315
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
E+R +P+I TY L++A +RE EEA +++ + +PD++ YNA++ Y
Sbjct: 316 EVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCG 375
Query: 305 ------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
RL + G PD +YN ++ A+ R G
Sbjct: 376 MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREG 410
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y +++ + EA+ EM P ++NS + G+ +K ++
Sbjct: 917 PTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQV 976
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+Q ++ +P +TY +I +Y + + L L +EMR +P + TY +L++AF +
Sbjct: 977 YQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGK 1036
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRM-HMGCEPDRAS 320
+ E+AEE+FE L + D Y+ +M+ +R L+ M G EP A+
Sbjct: 1037 LQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIAT 1096
Query: 321 YNIMVDAYGRAGLHE 335
++++ +Y +G E
Sbjct: 1097 MHLLMVSYSGSGQPE 1111
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG++ H A Y ++ S P TY +L+ + + ++++A V EM
Sbjct: 437 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAX 496
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +++ I G K G +A E F M R +P Y++M+++ + ++S A+
Sbjct: 497 VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAM 556
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG-AGIEPDV--------- 294
KL+ EM H KP+ Y ++ +E E+ ++ + ++ G+ V
Sbjct: 557 KLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGE 616
Query: 295 ---YAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
+A N L A + GCE DR + ++ +YG +G H
Sbjct: 617 CFDHAANMLRLA------ISQGCELDRENLLSILGSYGSSGRH 653
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA-VEIFQRMKRDCCQPSTETY 227
L +A +F +MR YG+ PS +Y S + K G P+ A I Q ++ +
Sbjct: 723 LFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIH 782
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T +I YGK A L +R + + AL++A+A G E A IF +
Sbjct: 783 TGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMR 842
Query: 288 AGIEPDVYAYNALMEA----------YRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
G P V + N LM+A Y +I + MG + ++S +M+DA+ AG
Sbjct: 843 DGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAG 898
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + H KAE + ++ PT T LL+ +Y SG E+AE V ++
Sbjct: 1064 IMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE 1123
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GLP S + Y+S ID LK G+ A++ MK+D +P +T + + + A
Sbjct: 1124 GLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEA 1183
Query: 244 LKLFNEMR 251
+ L +R
Sbjct: 1184 IVLLKALR 1191
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ + ++AE + LL C Y +++K + SG KAE + M++ G
Sbjct: 1030 LISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAG 1089
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + G P++A ++ +K + ST Y+ +I+ Y K +A+
Sbjct: 1090 VEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAI 1149
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ EM+ +P+ +T V A + EA + + L+ G +
Sbjct: 1150 QKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFD 1196
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 206 QKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN-ICTYT 263
Q+A+E+++ + R P+ ++++ GKA++ +A+++F R+ N + Y
Sbjct: 201 QRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIF--ARAEAAXGNTVQVYN 258
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------- 312
A++ +AR G + +E+ + ++ G EPD+ ++N L+ A +++ + +
Sbjct: 259 AMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVR 318
Query: 313 --GCEPDRASYNIMVDAYGR 330
G +PD +YN ++ A R
Sbjct: 319 RSGIQPDIITYNTLISACSR 338
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 19/223 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
++++ + + K+AE + LLD + P + Y +++ Y +G EKA VF M
Sbjct: 157 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 216
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+P S V YNS L+ K V +I+ +M+R QP +Y L+I YG+A +
Sbjct: 217 VGKGVPQSTVTYNS----LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 272
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL +F EM +P Y L++AFA G+ E+A+ +F+ ++ I PD+++Y
Sbjct: 273 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 332
Query: 300 LMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRA 331
++ AY + R+ + G EP+ +Y ++ Y +A
Sbjct: 333 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 375
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++LI AYG+ AE L P +Y L+++Y G AEA+FR M+
Sbjct: 86 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 145
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---KRDCCQPSTETYTLMINLYGKASK 239
G PSA+ Y + ++G ++A E+F+ + K+ +P + Y +MI +Y KA
Sbjct: 146 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 205
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K+F+ M + TY +L++ E +E +I++Q+Q + I+PDV +Y
Sbjct: 206 YEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYAL 262
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
L++AY R + G P +YNI++DA+ +G+ E
Sbjct: 263 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 309
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 96/178 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG+ ++A + E+LD+ PT Y +LL A+ +SG++E+A+ VF+ MR+
Sbjct: 262 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 321
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y + + + + + A + F+R+K D +P+ TY +I Y KA+
Sbjct: 322 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 381
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++++ +MR K N T +++A R A +++++ G+ PD A N L+
Sbjct: 382 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 439
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ S P +YALL+KAY + E+A +VF EM G+ P+ YN
Sbjct: 238 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 297
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD P +YT M++ Y AS A K F ++
Sbjct: 298 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 357
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+PNI TY L+ +A+ E+ E++E+++ +GI+ + +M+A
Sbjct: 358 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 406
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E + +L+ AY G AE V + K G P+ + Y + ++ +GG A IF
Sbjct: 81 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 140
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---CKPNICTYTALVNAF 269
+RM+ +PS TY +++ + + K A ++F + K KP+ Y ++ +
Sbjct: 141 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 200
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---AYRLISRMH-----MGCEPDRASY 321
+ G E+A ++F + G G+ YN+LM +Y+ +S+++ +PD SY
Sbjct: 201 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSY 260
Query: 322 NIMVDAYGRAGLHEGKCS 339
+++ AYGRA E S
Sbjct: 261 ALLIKAYGRARREEEALS 278
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I+A + KAE ++ + P TY ++ Y G L++A +FR+M+
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR 364
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ V+ NS++ L K G ++A EIF M +P +Y + L+G AS+ + A
Sbjct: 365 GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTL--LHGYASEGWFA 422
Query: 244 --LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ LFN M+S+ + + L++A+A+ G+ ++A IF ++Q G+ PDV Y+ ++
Sbjct: 423 DMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 302 EAYRLISRMH-----------MGCEPDRASYNIMVDAY 328
A+ + R+ G +P+ A Y+ ++ +
Sbjct: 483 SAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGF 520
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++ + G KA ++F EM + G+ P V YN ID L K KA
Sbjct: 261 CSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAE 320
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M + QP T TY MI+ Y + A K+F +M+S PNI + + +
Sbjct: 321 LVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASL 380
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHM-GCEPDR 318
+ G +EA EIF+ + G +PD+ +Y L+ Y L + M G D
Sbjct: 381 CKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADC 440
Query: 319 ASYNIMVDAYGRAGL 333
+NI++ AY + G+
Sbjct: 441 RVFNILIHAYAKRGM 455
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG--LPPSAVVYNSYIDGLLKGGNPQK 207
C+P +Y+++LK C + + ++A +F+ M K G P+ V YN+ I G K G K
Sbjct: 224 CVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGK 283
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A +F M R +P TY L+I+ KA A + +M ++ +P+ TY +++
Sbjct: 284 ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIH 343
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEP 316
+A G +EA ++F +++ G+ P++ N+ + EA + M G +P
Sbjct: 344 GYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKP 403
Query: 317 DRASYNIMVDAYGRAG 332
D SY ++ Y G
Sbjct: 404 DIVSYCTLLHGYASEG 419
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ + A + E+ P TY+ ++ A+ G L A F +M
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P+ VY+S I G G KA E+ M + +P + +IN K +
Sbjct: 505 GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +F+ + +P++ T+T+L++ + G ++A +I + ++ G+E D+ Y+ L++
Sbjct: 565 AHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLD 624
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
Y R++ G +P+ +Y IM+ RAG
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 156 TYALLLKAYCMSGLLEKA-EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
T + LLK C + E+A + M + G P+ Y+ + GL Q+A+++FQ
Sbjct: 194 TASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQM 253
Query: 215 MKRD--CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M ++ C P+ Y +I+ + K ++ A LF+EM KP++ TY +++A +
Sbjct: 254 MAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
++AE + Q+ G +PD YN ++ Y + R+
Sbjct: 314 RAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRL 351
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 7/195 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVE 210
P Y +++ +CM G L KA+ + EM G+P P V +NS I+ L K G A +
Sbjct: 508 PNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHD 567
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF + +P T+T +I+ Y K A K+ + M + +I TY+ L++ +
Sbjct: 568 IFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYF 627
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYN----ALMEAYRLISRMHMGCEPDRASYNIMVD 326
+ G + +F ++Q G++P+ Y L A R ++ E + + V
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS 687
Query: 327 AYG--RAGLHEGKCS 339
YG GL C+
Sbjct: 688 IYGIILGGLCRNNCA 702
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ YC+ G ++KA + M G+ V Y++ +DG K G + +
Sbjct: 579 PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTL 638
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R +P+T TY +M+ +A ++ A K F+EM + Y ++ R
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
+EA +F++L ++ + N ++ A + R G P+ ++
Sbjct: 699 NNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758
Query: 321 YNIMV 325
Y +M+
Sbjct: 759 YGVMI 763
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL Y G +F M+ G+ V+N I K G A+ I
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLI 462
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M++ P TY+ +I+ + + + A++ FN+M + +PN Y +++ F
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCM 522
Query: 272 EGLCEEAEEIFEQLQGAGI-EPDVYAYNA----------LMEAYRLISRM-HMGCEPDRA 319
G +A+E+ ++ GI PD+ +N+ +M+A+ + + +G PD
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVI 582
Query: 320 SYNIMVDAYGRAG 332
++ ++D Y G
Sbjct: 583 TFTSLIDGYCLVG 595
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 98/239 (41%), Gaps = 11/239 (4%)
Query: 75 REVDSNTIWDAFDSLP--PTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI-------- 123
R +D++ I+D + P T+ LI+ + +++K + + M V +
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ Y + + E+ P TY ++L +G A F EM +
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + +Y + GL + +A+ +FQ++ + S MIN K + A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+LF + + PN TY ++ ++G E+A +F ++ +GI P N ++
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIR 799
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+N K+ +L + +I A + ++A+ + + S +P E TY +++
Sbjct: 715 MNVKFSITILNT-----MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKD 769
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G +E A +F M K G+ P + + N I LL+ G KA ++ T
Sbjct: 770 GAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTT 829
Query: 228 TLMINLYGKASKSFMALKLF 247
+LM++L+ + K +KL
Sbjct: 830 SLMLSLFSRKGKYHEDMKLL 849
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 82/196 (41%), Gaps = 27/196 (13%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN--------PQKAVEIFQRMKRDCCQP 222
+ A +F E+ + P N ++ L + + P A+ +F R+ R+ P
Sbjct: 91 DDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGP 150
Query: 223 -----STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ TY+++++ +A + + L LF + K + T + L+ EE
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210
Query: 278 AEEIF-EQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCEPDRASYNI 323
A + ++ G P+V++Y+ +++ ++++++ C P+ +YN
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270
Query: 324 MVDAYGRAGLHEGKCS 339
++ + + G CS
Sbjct: 271 VIHGFFKEGETGKACS 286
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/181 (18%), Positives = 72/181 (39%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+++S T Y ++L C + ++A +F+++ + S + N+ I+ + K
Sbjct: 674 FHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYK 733
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F + P+ TY +MI K A +F+ M P
Sbjct: 734 VQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRL 793
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASY 321
++ +G +A ++ G I + + ++ + + H + A Y
Sbjct: 794 LNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKY 853
Query: 322 N 322
N
Sbjct: 854 N 854
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 22/214 (10%)
Query: 134 LHKKAEFTY-LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L K EF LEL D C P TY ++ C G A + ++M + G P
Sbjct: 171 LCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPD 230
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V Y++ ID L K +A++IF MK P+ +YT +I S+ A + N
Sbjct: 231 VVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLN 290
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL-- 306
EM S P+I T++ L++ F +EG EA+ + + + G+EP+V YN+LM Y L
Sbjct: 291 EMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQM 350
Query: 307 ------------ISRMHMGCEPDRASYNIMVDAY 328
I+R GC+PD SY+I+++ Y
Sbjct: 351 EVVEARKLFDVMITR---GCKPDVFSYSILINGY 381
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL K+ E L P T +L+ +C+ ++ +V ++ K GL P+ + +
Sbjct: 112 SLSKQMELAGLS-------PNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITF 164
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ I+GL K G +A+E+F M CQP TYT +IN K ++ A L +M
Sbjct: 165 TTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE 224
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
C+P++ TY+ L+++ ++ L EA +IF ++ GI P V +Y +L+ E
Sbjct: 225 VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKE 284
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A +++ M + PD ++++++D + + G
Sbjct: 285 ASAMLNEMTSLNIMPDIVTFSLLIDIFCKEG 315
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ S K+A E+ +P T++LL+ +C G + +A+ V + M + G
Sbjct: 272 LIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMG 331
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YNS + G +A ++F M C+P +Y+++IN Y + A
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAK 391
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+LFNEM PN +YT L++AF + G EA E+F+ + G PD+ Y+ L+E
Sbjct: 392 QLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451
Query: 303 --------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
A+RL M +P+ Y I++D+ ++G
Sbjct: 452 CKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y +A+ + E++ P +Y L+ A+C G L +A +F++M
Sbjct: 376 ILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTN 435
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ ++G K G KA +F+ M+ +P+ YT++I+ K+ A
Sbjct: 436 GYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHA 495
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF+E+ H +P++ YT ++N +EGL +EA E F +++ G P+ ++YN ++
Sbjct: 496 RKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRG 555
Query: 304 Y 304
+
Sbjct: 556 F 556
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y++L+ YCM +++A+ +F EM GL P+ V Y + I + G ++A
Sbjct: 367 CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAR 426
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F+ M + P TY++++ + K A +LF M+ KPN+ YT L+++
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
+ G A ++F +L G++PDV Y ++ EA +M GC P+
Sbjct: 487 CKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546
Query: 319 ASYNIMVDAY 328
SYN+++ +
Sbjct: 547 FSYNVIIRGF 556
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ + C L+ +A +F M+ G+ P+ V Y S I GL ++A
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEAS 286
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M P T++L+I+++ K A + M +PN+ TY +L++ +
Sbjct: 287 AMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY 346
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDR 318
+ + EA ++F+ + G +PDV++Y+ L+ Y ++ R +H G P+
Sbjct: 347 SLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406
Query: 319 ASYNIMVDAYGRAG 332
SY ++ A+ + G
Sbjct: 407 VSYTTLIHAFCQLG 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT +Y L++ C ++A A+ EM + P V ++ ID K GN +A +
Sbjct: 264 PTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGV 323
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P+ TY +++ Y + A KLF+ M + CKP++ +Y+ L+N +
Sbjct: 324 LKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCM 383
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
+EA+++F ++ G+ P+ +Y L+ A+ L MH G PD +
Sbjct: 384 VKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCT 443
Query: 321 YNIMVDAYGRAG 332
Y+++++ + + G
Sbjct: 444 YSVLLEGFCKQG 455
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ Q ++A + ++ + +P TY++LL+ +C G L KA +FR M+
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V+Y ID + K GN A ++F + QP + YT +IN K AL
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ F +M C PN +Y ++ F + A ++ +++ G D
Sbjct: 532 EAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C +L+E + ++ KA + + + P Y +L+ + C SG L A +F E
Sbjct: 442 CTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSE 501
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ +GL P +Y + I+GL K G +A+E F++M+ D C P+ +Y ++I + +
Sbjct: 502 LFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKD 561
Query: 240 SFMALKLFNEMR 251
A++L EMR
Sbjct: 562 ESRAVQLIGEMR 573
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S C P TY ++ +C SG +++A +F EM + G+ P+ + +N IDG K GN +
Sbjct: 243 SDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAE 302
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++++M C T+T +I+ Y +A + LK +N M++ P + TY L+N
Sbjct: 303 AEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLIN 362
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEP 316
A +E EA + Q++ + I P + YN +++ + + G C+P
Sbjct: 363 ALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDP 422
Query: 317 DRASYNIMV 325
D+ ++ I++
Sbjct: 423 DKVTFTILI 431
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q +H+ A + + E L + P T+ +L++ C G +++A VF++M +G P V
Sbjct: 156 QNQVHE-AIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVV 214
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
YN+ I+GL K Q+ E+F+ ++ R C P TYT +I+ + K+ K A LF E
Sbjct: 215 TYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEE 274
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
M +PN+ T+ L++ F + G EAE ++ ++ DV + +L++ Y
Sbjct: 275 MMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGY 329
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + K+A + E++ S P T+ +L+ + G + +AEA++R+M +
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V + S IDG + G ++ + MK P+ TY ++IN K ++ A
Sbjct: 315 CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEAR 374
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++++ P Y +++ F + G +E I ++++ +PD + L+
Sbjct: 375 DFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGH 434
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
EA + +RM C PD + N ++ +AG+
Sbjct: 435 CVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGM 474
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TYA+L+ A C L +A +++ + P +YN IDG K GN + I
Sbjct: 352 PTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVI 411
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ C P T+T++I + + F A+ +FN M + +C P+ T +L++ +
Sbjct: 412 LKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLK 471
Query: 272 EGLCEEAEEI 281
G+ EA I
Sbjct: 472 AGMPNEAYRI 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+ + Q H + + +P L+ + + + + E++
Sbjct: 78 LLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGK 137
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ ++ VYN+ + L+K +A+ +F+ P T T+ ++I + A
Sbjct: 138 EVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRA 197
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG-AGIEPDVYAYNALM- 301
++F +M S C P++ TY L+N + + E+F+++Q + PD+ Y +++
Sbjct: 198 FEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIIS 257
Query: 302 ---------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAG 332
EA L M G +P+ ++N+++D +G+ G
Sbjct: 258 GFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIG 298
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 11/158 (6%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
YN + L + G+ +F M D P ++ ++ +AS M KL E++
Sbjct: 76 YNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQ 135
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME--------- 302
+ + N Y L++ ++ EA +F++ PD + +N L+
Sbjct: 136 GKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVD 195
Query: 303 -AYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKC 338
A+ + M GC PD +YN +++ +A + C
Sbjct: 196 RAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGC 233
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGL 199
L+L+ SR C P ++ L+ A SG + A+ E+R+ G+ P + YN+ I
Sbjct: 245 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 304
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ N ++AV+++ M CQP TY MI++YG+ S A +LF ++ S P+
Sbjct: 305 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 364
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
TY +L+ AFAREG ++ +EI E + G D YN ++ A++L S
Sbjct: 365 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 424
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGL 333
M + G PD +Y +++D+ G+A +
Sbjct: 425 MKLSGRSPDAVTYTVLIDSLGKANM 449
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++S ++A Y +++ RC P TY ++ Y G+ +A +F+++ G
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YNS + + GN K EI + M + TY +I++YGK + +A
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+++M+ P+ TYT L+++ + + +EA E+ ++ A ++P + ++AL+ Y
Sbjct: 420 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGY 479
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGR 330
+ + G +PD +Y++M+D R
Sbjct: 480 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 516
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KK Y + ++ P EDTY L+ YC E+ ++ EMR+ GL P Y S
Sbjct: 939 KKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSL 998
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I K ++A E+F+ + C+ Y +M+ ++ + A KL M+
Sbjct: 999 ISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGV 1058
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------- 304
+P I T L+ +++ G EEAE++ + L+ G+ Y+++++AY
Sbjct: 1059 EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQ 1118
Query: 305 RLISRMHMGCEPDRASYNIMVDA 327
+L+ G EPD + V A
Sbjct: 1119 KLMEMKKDGLEPDHRIWTCFVRA 1141
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IEAYG+ L +KAE L + + L+ AY SG E+A A+F M + G
Sbjct: 753 VIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDG 812
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ N + L+ G + + Q ++ + S + TLM++ + A F
Sbjct: 813 PSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVK 872
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K++ M++ P + Y ++ A+ + E + +++ A +PD+ +N+++
Sbjct: 873 KIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLY 932
Query: 302 ----------EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
+ Y+LI G +PD +YN ++ Y R
Sbjct: 933 TGIGDFKKTGQVYQLIQ--EAGLKPDEDTYNTLILMYCR 969
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK--SFMALKLFN 248
VYN+ + + G K E+ M+ C+P ++ +IN K+ + +A++L N
Sbjct: 224 VYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLN 283
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
E+R +P+I TY L++A +RE EEA +++ + +PD++ YNA++ Y
Sbjct: 284 EVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCG 343
Query: 305 ------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
RL + G PD +YN ++ A+ R G
Sbjct: 344 MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREG 378
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y +++ + EA+ EM P ++NS + G+ +K ++
Sbjct: 885 PTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQV 944
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+Q ++ +P +TY +I +Y + + L L +EMR +P + TY +L++AF +
Sbjct: 945 YQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGK 1004
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRM-HMGCEPDRAS 320
+ E+AEE+FE L + D Y+ +M+ +R L+ M G EP A+
Sbjct: 1005 LQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIAT 1064
Query: 321 YNIMVDAYGRAGLHE 335
++++ +Y +G E
Sbjct: 1065 MHLLMVSYSGSGQPE 1079
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG++ H A Y ++ S P TY +L+ + + ++++A V EM
Sbjct: 405 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAR 464
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +++ I G K G +A E F M R +P Y++M+++ + ++S A+
Sbjct: 465 VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAM 524
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG-AGIEPDV--------- 294
KL+ EM H KP+ Y ++ +E E+ ++ + ++ G+ V
Sbjct: 525 KLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGE 584
Query: 295 ---YAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
+A N L A + GCE DR + ++ +YG +G H
Sbjct: 585 CFDHAANMLRLA------ISQGCELDRENLLSILGSYGSSGRH 621
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
A G++ +A + +E+ +R P + +LK Y G +K V++ +++ GL P
Sbjct: 898 AKGKRVRDVEAMVSEMEV--ARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKP 955
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
YN+ I + P++ + + M+R +P +TY +I+ +GK A +LF
Sbjct: 956 DEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELF 1015
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
+ S +CK + Y ++ F G +AE++ ++ AG+EP + + LM
Sbjct: 1016 EGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGS 1075
Query: 302 ----EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLH 334
EA +++ + + G Y+ ++DAY + G H
Sbjct: 1076 GQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDH 1113
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA-VEIFQRMKRDCCQPSTETY 227
L +A +F +MR YG+ PS +Y S + K G P+ A I Q ++ +
Sbjct: 691 LFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIH 750
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T +I YGK A L +R + + AL++A+A G E A IF +
Sbjct: 751 TGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMR 810
Query: 288 AGIEPDVYAYNALMEA----------YRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
G P V + N LM+A Y +I + MG + ++S +M+DA+ AG
Sbjct: 811 DGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAG 866
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + H KAE + ++ PT T LL+ +Y SG E+AE V ++
Sbjct: 1032 IMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE 1091
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GLP S + Y+S ID LK G+ A++ MK+D +P +T + + + A
Sbjct: 1092 GLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEA 1151
Query: 244 LKLFNEMR 251
+ L +R
Sbjct: 1152 IVLLKALR 1159
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+G+ + ++AE + LL C Y +++K + SG KAE + M++ G
Sbjct: 998 LISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAG 1057
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + + G P++A ++ +K + ST Y+ +I+ Y K +A+
Sbjct: 1058 VEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAI 1117
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ EM+ +P+ +T V A + EA + + L+ G +
Sbjct: 1118 QKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFD 1164
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 206 QKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN-ICTYT 263
Q+A+E+++ + R P+ ++++ GKA++ +A+++F R+ N + Y
Sbjct: 169 QRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIF--ARAEAASGNTVQVYN 226
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------- 312
A++ +AR G + +E+ + ++ G EPD+ ++N L+ A +++ + +
Sbjct: 227 AMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVR 286
Query: 313 --GCEPDRASYNIMVDAYGR 330
G +PD +YN ++ A R
Sbjct: 287 RSGIQPDIITYNTLISACSR 306
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 91/162 (56%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++ + PT TY +++ C G + A ++F +M+K GL P V YN+ IDG K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++V +F+ MK C+P TY +IN + K A + F EM+ KPN+ +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
Y+ L++A +EG+ + A + F + G+ P+ + Y++L++A
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA 281
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ L ++ + E+ C P TY L+ ++C + +A FREM+
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y++ ID L K G Q A++ F M R P+ TY+ +I+ KA A
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAF 292
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +EM NI TYT L++ EG+ EAEE+F + AG+ P++ AY AL+ +
Sbjct: 293 MLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGH 352
Query: 305 RLISRMHMGCE 315
+ M E
Sbjct: 353 IKVRSMDKAME 363
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + L G+LE A F M K+ + P A N+++ L K G +
Sbjct: 58 CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSR 117
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ F+ M P+ TY +MI K A LF +M+ P+I TY L++ +
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDR 318
+ GL +E+ +FE+++ G EPDV YNAL+ ++ M E P+
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237
Query: 319 ASYNIMVDAYGRAGLHE 335
SY+ ++DA + G+ +
Sbjct: 238 ISYSTLIDALCKEGMMQ 254
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 37/262 (14%)
Query: 82 IWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
+W + P +D L +V V+L + +EA GQ
Sbjct: 51 LWTTRNVCVPGFGVFDALFSVLVELGM-----------------LEAAGQ---------C 84
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+L + R +P + L +G + + FR+M G+ P+ YN I + K
Sbjct: 85 FLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCK 144
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A +F++MK+ P TY +I+ YGK ++ LF EM+ C+P++ T
Sbjct: 145 EGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVIT 204
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--------- 312
Y AL+N+F + A E F +++ ++P+V +Y+ L++A M M
Sbjct: 205 YNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT 264
Query: 313 --GCEPDRASYNIMVDAYGRAG 332
G P+ +Y+ ++DA +AG
Sbjct: 265 RVGLLPNEFTYSSLIDANCKAG 286
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A ++ + + A ++++ +P E TY+ L+ A C +G L +A + EM +
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + +DGL + G +A E+F+ M + P+ + YT +I+ + K A+
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LFNEMR KP+I + +V E EE + I +++ +GI + Y LM+AY
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
L+ M +G E ++ ++D + GL
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGL 462
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ AY +G +A + EMR G + V + + IDGL K G Q+A+ F RM
Sbjct: 415 YTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMP 474
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP+ YT +I+ K + A KLF+EM+ P+ YTA+++ + G +
Sbjct: 475 DHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQ 534
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM 301
EA + ++ GIE D+YAY +L+
Sbjct: 535 EALNMRNKMMEMGIELDLYAYTSLV 559
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
+S+ K E + E+ + P + ++ C LE+ + + EM++ G+ + V+
Sbjct: 356 RSMDKAMEL-FNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVI 414
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y + +D K GN +A+ + + M+ + + T+ +I+ K A+ F M
Sbjct: 415 YTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMP 474
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
H +PN+ YTAL++ + +A+++F+++Q + PD AY A++
Sbjct: 475 DHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQ 534
Query: 302 EAYRLISR-MHMGCEPDRASYNIMVDAYGRAG 332
EA + ++ M MG E D +Y +V + G
Sbjct: 535 EALNMRNKMMEMGIELDLYAYTSLVWGLSQCG 566
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K + + EF + E+ D P +Y+ L+ A C G+++ A F +M + GL P+
Sbjct: 216 KGMLRAFEF-FREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFT 274
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y+S ID K GN +A + M ++ + TYT +++ + A +LF M
Sbjct: 275 YSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMG 334
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
PN+ YTAL++ + ++A E+F +++ I+PD+ + ++
Sbjct: 335 KAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE 394
Query: 302 EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
E +++ M G + Y ++DAY +AG
Sbjct: 395 ECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ ++ + +AE + + + P Y L+ + ++KA +F EMR+
Sbjct: 313 LLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD 372
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P +++ + + GL ++ I MK + YT +++ Y KA A+
Sbjct: 373 IKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAI 432
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L EMR + + T+ AL++ + GL +EA F ++ ++P+V Y AL+
Sbjct: 433 NLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGL 492
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+A +L M PD+ +Y M+D + G
Sbjct: 493 CKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHG 531
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + +A E+ D T T+ L+ C GL+++A F M +
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD 477
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ VY + IDGL K A ++F M+ P YT MI+ K AL
Sbjct: 478 LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEAL 537
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ N+M + ++ YT+LV ++ G ++A + ++ G GI PD
Sbjct: 538 NMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ ++ L ++A + + + D P Y L+ C + + A+ +F EM+
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + Y + IDG LK GN Q+A+ + +M + YT ++ + + A
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQAR 572
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
K EM P+ T L+ G +EA E+ +L G+
Sbjct: 573 KFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R+ C P + + ++ + A + F M + P + A ++ ++ G +
Sbjct: 55 RNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGD 114
Query: 277 EAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPDRASYNIMV 325
+ + F + GAGI P V+ YN ++ A L +M MG PD +YN ++
Sbjct: 115 LSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLI 174
Query: 326 DAYGRAGL 333
D YG+ GL
Sbjct: 175 DGYGKIGL 182
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +L+ YC G +A+++ +E+ K G P+ Y+ I+ K ++A
Sbjct: 155 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 214
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F +M C P+ T+ +I + KA A+KLF EM CK I TY L+++
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 274
Query: 270 ARE-GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHM-GCEPDRA 319
++ G A ++F +L+GAG+ P + YN+L++ + RL+ MH GC+PD
Sbjct: 275 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVI 334
Query: 320 SYNIMVDAYGRAGLHEGKCSYSLVE 344
+YN ++ G CS + VE
Sbjct: 335 TYNCLIS---------GLCSANRVE 350
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H +A + E+L P TY +L++ +C G + +A +VF +M+ GL P+A N+
Sbjct: 6 HDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 65
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ GL + G A+++F+ M+ P++ ++ +++ + A + A++ F EM++
Sbjct: 66 LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASG 122
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR----- 309
+P++ +Y L++A + G EA +F + PD+ YN LM+ Y I +
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQ 179
Query: 310 ------MHMGCEPDRASYNIMVDAY 328
+ G EP+ +Y+I+++ Y
Sbjct: 180 SLMKEILKAGYEPNVFTYSIIINCY 204
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 17/223 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + +A + ++ S +P T LL C G + A +FREM+
Sbjct: 30 VLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAG 89
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P++ +N + G G +A+E F+ MK +P E+Y ++++ + + A
Sbjct: 90 PFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEA 146
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF+ M C P+I TY L++ + + G EA+ + +++ AG EP+V+ Y+ ++
Sbjct: 147 HALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINC 203
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
EA+ + +M C P+ ++N ++ + +AG+ E
Sbjct: 204 YCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 246
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y + +A+ E+L + P TY++++ YC +E+A VF +M +
Sbjct: 164 VLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 223
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFM 242
P+AV +N+ I G K G + A+++F M++ C+ + TY TL+ +L K +
Sbjct: 224 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 283
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+ LFN++ P I TY +L+ F+ + + + G +PDV YN L+
Sbjct: 284 AVDLFNKLEGAGLTPTIVTYNSLIQGFSERA--NDGLRLLCHMHAEGCKPDVITYNCLIS 341
Query: 303 AYRLISRMH--------MGCEPDRASYNIMV 325
+R+ M C P+ ++N ++
Sbjct: 342 GLCSANRVEDAQRLFNGMACAPNVTTFNFLI 372
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I Y + ++A ++++++S C+P T+ L+ +C +G+LE A +F EM K
Sbjct: 199 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 258
Query: 184 GLPPSAVVYNSYIDGLLKG-GNPQKAVEIFQR---------------------------- 214
G + V YN+ ID L K G AV++F +
Sbjct: 259 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGL 318
Query: 215 -----MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
M + C+P TY +I+ A++ A +LFN M C PN+ T+ L+
Sbjct: 319 RLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGL 375
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
+ EEA I +++ PD+ +N ++ A+ MH
Sbjct: 376 CAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMH 413
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A K AL+LF E+ + PN TY L+ F + G +A +F ++ +G+ P+
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 297 YNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
N L+ A +L M G P AS+NI++ + AG
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG 109
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 16/239 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ ++A + P TY L+ A SG + A ++ EMR G
Sbjct: 212 LIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAG 271
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ YN+ I K G+ + ++ +++M + C+ S TY+ +I+ K+ + +AL
Sbjct: 272 HALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLAL 331
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F+E C+PN+ T+ +L+ A A+ E+A E+FE +Q G PDV Y AL+ AY
Sbjct: 332 RFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAY 391
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYPA 352
+ + GC+PD YN ++D G C++ + +V H A
Sbjct: 392 ERGGKWQLALQAFQAMQAKGCKPDSIVYNAIIDTLWDTG-----CAWPQRQAAVLHRRA 445
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L+ Y G E+A V R M+ G+ P YN+ + G Q A++
Sbjct: 203 VPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQ 262
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+++ M+ +T +Y +I+ + KA L + +M C+ ++ TY++L++A
Sbjct: 263 LYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACE 322
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ G + A F++ P+V +N+L+ +A L M GC PD
Sbjct: 323 KSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVV 382
Query: 320 SYNIMVDAYGRAG 332
+Y ++ AY R G
Sbjct: 383 TYTALISAYERGG 395
Score = 77.8 bits (190), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L+ G L+ A V+ +M++ G+ P+ V YN+ ID K G ++A+++ +RM
Sbjct: 173 THSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRM 232
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P T TY ++ + + AL+L+ EMR+ N +Y AL++A ++ G
Sbjct: 233 KFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGDL 292
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA------YRLISR-----MHMGCEPDRASYNIM 324
+ + + Q+ G E V Y++L+ A ++L R + C P+ ++N +
Sbjct: 293 PQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFNSL 352
Query: 325 VDA 327
+ A
Sbjct: 353 ITA 355
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY + + LE+A + +M++ G+ + +++ ++ +K G + A+++++ M
Sbjct: 138 TYTAAISICVSAQQLERALELSADMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVWEDM 197
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+RD P+ TY +I++YGK + AL++ M+ +P TY L+ A G
Sbjct: 198 QRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQW 257
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCEPDRASYN 322
+ A +++E+++ AG + +YNAL+ A YR + + GCE +Y+
Sbjct: 258 QTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQM--VQQGCERSVITYS 315
Query: 323 IMVDAYGRAG 332
++ A ++G
Sbjct: 316 SLISACEKSG 325
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+EL D C P TY ++ C G A + ++M + G P+ V Y++ ID
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K +A++IF MK P TY +I S+ A L NEMRS P+
Sbjct: 248 HRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR--------- 309
I T+ LV+ +EG EA+ + + + G+EPDV Y++LM Y L S
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367
Query: 310 --MHMGCEPDRASYNIMVDAY 328
+ GC+PD SYNI+++ Y
Sbjct: 368 AMITKGCKPDVFSYNILINGY 388
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 15/217 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y +S +A + ++ C P +Y +L+ YC +++A+ +F EM G
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ I GL + G+ ++A +F+ M + P+ TY+++++ + K A
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
+LF M+S KPN+ Y L++A + G +A ++F +L G++P+ Y +
Sbjct: 469 RLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGL 528
Query: 301 ---------MEAYRLISRMHMGCEPDRASYNIMVDAY 328
+EA+R + GC PD SYN+++ +
Sbjct: 529 CKEGLLDEALEAFRNME--EDGCPPDEISYNVIIRGF 563
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SL K+ E L P T ++L+ + ++ A +V ++ K GL P+ V +
Sbjct: 119 SLTKQMELAGLS-------PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTF 171
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ I+ L K G +A+E+F M C+P TYT +IN K ++ A L +M
Sbjct: 172 TTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE 231
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
C+PN+ TY+ ++++ ++ EA +IF ++ GI PD++ YN+L+ E
Sbjct: 232 AGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKE 291
Query: 303 AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
A L++ M + PD ++N++VD + G
Sbjct: 292 ASALLNEMRSLNIMPDIVTFNVLVDTICKEG 322
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 14/236 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ S K+A E+ +P T+ +L+ C G + +A+ V + M + G
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y+S + G +A ++F M C+P +Y ++IN Y K + A
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+LFNEM PN +Y L++ + G EA +F+ + G P+++ Y+ L++
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458
Query: 303 --------AYRLISRMHMG-CEPDRASYNIMVDAYGRAG-LHEGKCSYSLVELSVK 348
A+RL M +P+ YNI++DA ++G L + + +S EL VK
Sbjct: 459 CKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFS--ELFVK 512
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L++ C ++A A+ EMR + P V +N +D + K G +A +
Sbjct: 271 PDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGV 330
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P TY+ ++ Y S+ A KLF+ M + CKP++ +Y L+N + +
Sbjct: 331 LKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCK 390
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
+EA+++F ++ G+ P+ +YN L+ EA L MH G P+ +
Sbjct: 391 VKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450
Query: 321 YNIMVDAYGRAG 332
Y+I++D + + G
Sbjct: 451 YSILLDGFCKQG 462
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + +A+ + E++ P +Y L+ C G L +A +F+ M
Sbjct: 383 ILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTN 442
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ Y+ +DG K G KA +F+ M+ +P+ Y ++I+ K+ A
Sbjct: 443 GNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDA 502
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KLF+E+ +PN YT ++N +EGL +EA E F ++ G PD +YN ++
Sbjct: 503 RKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562
Query: 304 Y 304
+
Sbjct: 563 F 563
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY++LL +C G KA +FR M+ P+ V+YN ID + K GN + A +
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARK 504
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F + QP+ + YT +IN K AL+ F M C P+ +Y ++ F
Sbjct: 505 LFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFL 564
Query: 271 REGLCEEAEEIFEQLQGAGIEPDV 294
A ++ +++ G DV
Sbjct: 565 HHKDESRAVQLIGEMRDKGFIADV 588
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ + ++ KA + + + P Y +L+ A C SG L A +F E+
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+A +Y + I+GL K G +A+E F+ M+ D C P +Y ++I + A
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572
Query: 244 LKLFNEMR 251
++L EMR
Sbjct: 573 VQLIGEMR 580
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 19/223 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
++++ + + K+AE + LLD + P + Y +++ Y +G EKA VF M
Sbjct: 221 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 280
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+P S V YNS L+ K V +I+ +M+R QP +Y L+I YG+A +
Sbjct: 281 VGKGVPQSTVTYNS----LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 336
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL +F EM +P Y L++AFA G+ E+A+ +F+ ++ I PD+++Y
Sbjct: 337 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 396
Query: 300 LMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRA 331
++ AY + R+ + G EP+ +Y ++ Y +A
Sbjct: 397 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 439
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++LI AYG+ AE L P +Y L+++Y G AEA+FR M+
Sbjct: 150 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---KRDCCQPSTETYTLMINLYGKASK 239
G PSA+ Y + ++G ++A E+F+ + K+ +P + Y +MI +Y KA
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 269
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K+F+ M + TY +L++ E +E +I++Q+Q + I+PDV +Y
Sbjct: 270 YEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
L++AY R + G P +YNI++DA+ +G+ E
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 373
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 96/178 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG+ ++A + E+LD+ PT Y +LL A+ +SG++E+A+ VF+ MR+
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y + + + + + A + F+R+K D +P+ TY +I Y KA+
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++++ +MR K N T +++A R A +++++ G+ PD A N L+
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ S P +YALL+KAY + E+A +VF EM G+ P+ YN
Sbjct: 302 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD P +YT M++ Y AS A K F ++
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+PNI TY L+ +A+ E+ E++E+++ +GI+ + +M+A
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E + +L+ AY G AE V + K G P+ + Y + ++ +GG A IF
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---CKPNICTYTALVNAF 269
+RM+ +PS TY +++ + + K A ++F + K KP+ Y ++ +
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---AYRLISRMH-----MGCEPDRASY 321
+ G E+A ++F + G G+ YN+LM +Y+ +S+++ +PD SY
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSY 324
Query: 322 NIMVDAYGRAGLHEGKCS 339
+++ AYGRA E S
Sbjct: 325 ALLIKAYGRARREEEALS 342
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +Y + + E+ IP TY L+ +C SG L A+ +F+EM
Sbjct: 419 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 478
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+PPS V Y +DGL G KA+EIF++M++ Y ++I+ ASK A
Sbjct: 479 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 538
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF + KP++ TY ++ ++G EA+ +F +++ G PD + YN L+ A
Sbjct: 539 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 598
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVD 326
+ LI M + G D ++ +++D
Sbjct: 599 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ IP T++ L+ + G L +A+ ++ EM G+ P + YNS IDG K
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F M C+P TY+++IN Y KA + ++LF E+ S PN TY
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LV F + G A+E+F+++ G+ P V Y L++
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY +L C SG A +FR+M + + S V Y+ ID L K G+ A+ +
Sbjct: 237 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 296
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ + TY+ +I K K+ EM P++ T++AL++ F +
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG EA+E++ ++ GI PD YN+L++ + + +H GCEPD +
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416
Query: 321 YNIMVDAYGRA 331
Y+I++++Y +A
Sbjct: 417 YSILINSYCKA 427
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +++ +A + ++ C P TY++L+ +YC + ++ +FRE+ G
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + YN+ + G + G A E+FQ M PS TY ++++ + AL
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F +M+ + I Y +++ ++A +F L G++PDV YN ++
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 564
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAY-GRAGL 333
EA L +M GC PD +YNI++ A+ G +GL
Sbjct: 565 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 605
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y++++ + C G + A ++F EM G+ V Y+S I GL G ++ + M
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T++ +I+++ K K A +L+NEM + P+ TY +L++ F +E
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRASYNIMV 325
EA ++F+ + G EPD+ Y+ L+ +Y R+ M + G P+ +YN +V
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456
Query: 326 DAYGRAG 332
+ ++G
Sbjct: 457 LGFCQSG 463
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ C G + + REM + P V +++ ID +K G +A E++ M
Sbjct: 311 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P T TY +I+ + K + A ++F+ M S C+P+I TY+ L+N++ +
Sbjct: 371 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 430
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
++ +F ++ G+ P+ YN L+ + ++SR G P +Y
Sbjct: 431 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR---GVPPSVVTY 487
Query: 322 NIMVDA 327
I++D
Sbjct: 488 GILLDG 493
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ L+ +C+ G + +A A+ M + P V ++ I+GL G +A+ +
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM QP TY ++N K+ S +AL LF +M K ++ Y+ ++++ +
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+G ++A +F +++ GI+ DV Y++L+ + +++ M PD +
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 346
Query: 321 YNIMVDAYGRAG-LHEGKCSYS 341
++ ++D + + G L E K Y+
Sbjct: 347 FSALIDVFVKEGKLLEAKELYN 368
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ L D P TY +++ C G L +A+ +FR+M++ G P YN I L
Sbjct: 542 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 601
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG--KASKSFMAL 244
G +VE+ + MK + T ++I++ + KSF+ +
Sbjct: 602 GSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDM 646
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+ +C + A ++ +M + G P V YN+ ID L K A++
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDF 212
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ + R +P+ TYT ++N + + A +L +M K PN+ TY+AL++AF +
Sbjct: 213 FKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVK 272
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
G EA+EIFE++ I+PD+ Y++L+ L R+ GC PD S
Sbjct: 273 NGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVS 332
Query: 321 YNIMVDAYGRA 331
YN +++ + +A
Sbjct: 333 YNTLINGFCKA 343
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P TY+ LL A+ +G + +A+ +F EM + + P V Y+S I+GL
Sbjct: 250 DMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F M C P +Y +IN + KA + +KLF +M N TY
Sbjct: 310 RIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYN 369
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L+ F + G ++A+E F Q+ G+ PD++ YN L+
Sbjct: 370 TLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ + +A+ + E++ P TY+ L+ C+ +++A +F M G
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I+G K + +++F++M + +T TY +I + + A
Sbjct: 326 CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQ 385
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+ F++M S P+I TY L+ GL E+A IFE +Q + ++ D+ Y +++
Sbjct: 386 EFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGL-HEGKCSYS 341
A+ L + + G +PD +Y M+ GL HE + Y+
Sbjct: 446 CKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYT 494
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ + C + + A F+E+ + G+ P+ V Y + ++GL G A +
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + P+ TY+ +++ + K K A ++F EM P+I TY++L+N
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+EA ++F+ + G PDV +YN L+ + +L +M G + +
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367
Query: 321 YNIMVDAYGRAG 332
YN ++ + + G
Sbjct: 368 YNTLIQGFFQVG 379
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 9/212 (4%)
Query: 88 SLPPTHATWDDLIN-VSVQLRL---NKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKA 138
S+ P T+ LIN + + R+ N+ +D +V C + LI + + +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ ++ + TY L++ + G ++KA+ F +M +G+ P YN + G
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G +KA+ IF+ M++ TYT +I K K A LF + KP+
Sbjct: 410 LCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I TYT +++ +GL E E ++ +++ G+
Sbjct: 470 IVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L A +FREM K PS V +N + ++K + + ++M+ + T+ +
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + +AL + +M +P+ T +LVN F R +A + +++ G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 290 IEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
PD+ AYNA++++ R++ G P+ +Y +V+ +G
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG 239
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T++ L+K Y + G + + ++R M G+ P+ VVYN+ ++GL GN +AV
Sbjct: 313 CRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAV 372
Query: 210 EIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ RM++DC C+P+ TY+ +++ + KA A +++N+M + +PN+ YT++V+
Sbjct: 373 DVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDV 432
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPD 317
+ + ++A + + + G P V +N ++ A R++ +M GC PD
Sbjct: 433 LCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPD 492
Query: 318 RASYNIMVDA 327
+YN ++D
Sbjct: 493 TRTYNELLDG 502
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P TY+ L+ + +G L+ A V+ +M G+ P+ VVY S +D L K
Sbjct: 381 DCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFD 440
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + M D C P+ T+ I + A+++ ++M+ + C P+ TY L+
Sbjct: 441 QAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELL 500
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCE 315
+ +EA E+ +L+ +E ++ YN +M + +++ RM + G +
Sbjct: 501 DGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVK 560
Query: 316 PDRASYNIMVDAYGRAG 332
PD + N+++ AY + G
Sbjct: 561 PDAITVNVVIYAYSKLG 577
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++IE G+ S + ++ R ++D++ +L +Y SGL ++A +F ++++
Sbjct: 78 VMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEF 137
Query: 184 GLPPSAVVYNSYIDGLL-KGGNPQKAV-EIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P+ +YN +D LL + GN + +++ M+ + +P+ TY +++ K K
Sbjct: 138 GCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLD 197
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A KL EM C P+ +YT +V A +G EEA E+ + G+ V NAL+
Sbjct: 198 GACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV---VSVCNALI 254
Query: 302 ----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
E + L+ M G +P+ SY+ ++ G
Sbjct: 255 CGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVG 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 88/186 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + + A + ++++ P Y ++ C + + ++A + M G
Sbjct: 394 LVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDG 453
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ V +N++I GL GG A+ + +M+R C P T TY +++ ++ A
Sbjct: 454 CPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEAC 513
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L E+ K + N+ TY ++ F+ G E ++ ++ G++PD N ++ AY
Sbjct: 514 ELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAY 573
Query: 305 RLISRM 310
+ ++
Sbjct: 574 SKLGKV 579
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E+ C+P +Y ++ A C G +E+A V R++G V N+ I GL +
Sbjct: 204 VEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREV---ARRFGAEGVVSVCNALICGLCRE 260
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G + + M + P+ +Y+ +I+ + +AL + +M C+PN+ T+
Sbjct: 261 GRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTF 320
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM 312
++L+ + G E ++ + G+ P+V YN L+ EA + RM
Sbjct: 321 SSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEK 380
Query: 313 G--CEPDRASYNIMVDAYGRAGLHEG 336
C P+ +Y+ +V + +AG +G
Sbjct: 381 DCFCRPNVTTYSTLVHGFVKAGDLQG 406
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 113/254 (44%), Gaps = 23/254 (9%)
Query: 95 TWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE 154
W+ ++N V + + +V S V +L + S+ +A + C PT
Sbjct: 410 VWNKMVNCGV------RPNVVVYTSMVDVLC-----KNSMFDQAYRLIDNMATDGCPPTV 458
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
T+ +K C G + A V +M++YG P YN +DGL ++A E+ +
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
++ + + TY ++ + K L++ M + KP+ T ++ A+++ G
Sbjct: 519 LEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGK 578
Query: 275 CEEAEEIFEQLQ-GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
A + +++ G + PD+ A+ +L+ EA +++M + G P+ A+++
Sbjct: 579 VRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWD 638
Query: 323 IMVDAYGRAGLHEG 336
++V + + H G
Sbjct: 639 VLVRGFFKKLGHMG 652
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ + Y+ I+ L + I +MK + S +++ ++N Y + ALK+F
Sbjct: 72 TPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMF 131
Query: 248 NEMRSHKCKPNICTYTALVNAFARE--GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
++ CKP + Y L++A E ++E ++G G+EP+V+ YN L++A
Sbjct: 132 YRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALC 191
Query: 305 ----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
L+ GC PD SY +V A G
Sbjct: 192 KNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDG 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY ++++ + L+ + +M+ +P S + ++ G +A+++F
Sbjct: 72 TPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMF 131
Query: 213 QRMKRDCCQPSTETYTLMIN-LYGKASKSF-MALKLFNEMRSHKCKPNICTYTALVNAFA 270
R+K C+P+ + Y +++ L G++ F M ++ MR +PN+ TY L+ A
Sbjct: 132 YRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALC 191
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G + A ++ ++ G PD +Y ++ A
Sbjct: 192 KNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAA 224
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA--VVYNSYI-DGLLKGGNPQKAVE 210
+D Y+LLLK S L + R PPS+ +++ S++ L + N A++
Sbjct: 4 KDGYSLLLKHRKPSSL-----PLVLATRPLNPPPSSASLLHESHVAHALRREPNVLYALQ 58
Query: 211 IFQRMKRDCCQPSTE-TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
FQ + T TY +MI G+ S+ + ++M+ + + ++ ++N++
Sbjct: 59 HFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSY 118
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS--RMHM-----------GCEP 316
GL + A ++F +++ G +P V YN L++A S + HM G EP
Sbjct: 119 KNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEP 178
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVELS 346
+ +YN+++ A + G +G C LVE+S
Sbjct: 179 NVFTYNVLLKALCKNGKLDGACKL-LVEMS 207
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic; AltName: Full=Protein PROTON GRADIENT
REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 12/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI + + + A+ +L++ + CIP TY LL AY SG +++ +++EM +
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFM 242
+ + +N I GL+K GN A++++ + D P+ TY +I+ K+ + +
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +LF M + C+PN Y L+N F + G + A +F+++ G+ PD+ Y+ L++
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRA 331
++ R+ G PD YN++++ G++
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 4/211 (1%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD +++ L ++ + P +C LI+ + +A+ + +LD C P
Sbjct: 872 DDALDLYYDLMSDRDFSPT---ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +L+ + +G + A A+F+ M K G+ P Y+ +D L G + + F+ +K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFAREGLC 275
P Y L+IN GK+ + AL LFNEM++ + P++ TY +L+ G+
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
EEA +I+ ++Q AG+EP+V+ +NAL+ Y L
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 135 HKKAEFTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAE 174
HK TY+ LLD +P T+ +L+ A C +G +A
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
MR G+ P+ YN+ I GLL+ A+E+F M+ +P+ TY + I+ Y
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GK+ S AL+ F +M++ PNI A + + A+ G EA++IF L+ G+ PD
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 295 YAYNALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGRA 331
YN +M EA +L+S M GCEPD N +++ +A
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 136 KKAEFTYL-ELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
K E Y+ +L+ R I + +TY + K+ + G L++A R+MR++G +A YN
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I LLK +A+E+++RM + +PS +TY+ ++ GK + L EM +
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------- 304
KPN+ T+T + R G EA EI +++ G PDV Y L++A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 305 -RLISRMHMG-CEPDRASYNIMVDAY 328
+ +M G +PDR +Y ++D +
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRF 338
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY + + Y SG A F +M+ G+ P+ V N+ + L K G ++A +I
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K P + TY +M+ Y K + A+KL +EM + C+P++ +L+N +
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+EA ++F +++ ++P V YN L+ EA L M GC P+ +
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 321 YNIMVD 326
+N + D
Sbjct: 611 FNTLFD 616
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 12/230 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
I+ I+ YG+ A T+ ++ P L + +G +A+ +F ++
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +V YN + K G +A+++ M + C+P +IN KA +
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A K+F M+ K KP + TY L+ + G +EA E+FE + G P+ +N L +
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG-LHEGKCSY 340
L M MGC PD +YN ++ + G + E C +
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+++ C + A +F + K G+ P YN I GLL+ + A ++F ++K
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
C P TY +++ YGK+ K +L+ EM +H+C+ N T+ +++ + G ++A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 279 EEIFEQLQGA-GIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVD 326
+++ L P Y L++ R++ GC P+ A YNI+++
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 327 AYGRAGLHEGKCS 339
+G+AG + C+
Sbjct: 935 GFGKAGEADAACA 947
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 33/280 (11%)
Query: 79 SNTIWDAFDSLPPTHATWDDLINVSVQLRLN---KKWD----PIVLMSCVSILLIEAYGQ 131
+N W+ A D+ ++ S +L N + D PI+ SC G
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN---NVSGA 768
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
++L +K FT D P TY LL+ + ++E A+ VF +++ G P
Sbjct: 769 RTLFEK--FTK----DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
YN +D K G + E+++ M C+ +T T+ ++I+ KA AL L+ ++
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 252 SHK-CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
S + P CTY L++ ++ G EA+++FE + G P+ YN L+ +
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 305 ----RLISRM-HMGCEPDRASYNIMVDA---YGRA--GLH 334
L RM G PD +Y+++VD GR GLH
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +G+ A + ++ P TY++L+ CM G +++ F+E+++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFM 242
GL P V YN I+GL K ++A+ +F MK P TY +I G A
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A K++NE++ +PN+ T+ AL+ ++ G E A +++ + G P+ Y L
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++++ C P L+ + +++A +F M++ L P+ V YN+ + GL K G
Sbjct: 528 EMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q+A+E+F+ M + C P+T T+ + + K + +ALK+ +M C P++ TY
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 264 ALVNAFAREGLCEEAEEIFEQLQG---------AGIEPDVYAYNALMEAYRLISRMHMGC 314
++ + G +EA F Q++ + P V + + +AY++I+ C
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 315 EPDRAS 320
A+
Sbjct: 708 ADQPAN 713
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ + ++ +G + +A + + M G P V Y ID L A E+
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++MK +P TY +++ + + ++EM P++ T+T LV+A +
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G EA + + ++ GI P+++ YN L+ +A L M +G +P +
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 321 YNIMVDAYGRAG 332
Y + +D YG++G
Sbjct: 436 YIVFIDYYGKSG 447
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L+I G+ ++A + E+ SR I P TY L+ ++G++E+A ++ E+++
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ +N+ I G G P+ A ++Q M P+T TY + N
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 50/257 (19%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ G+ ++A + ++ C P T+ L C + + A + +M G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ I GL+K G ++A+ F +MK+ P T ++ KAS A
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 245 KLF-NEMRSHKCKPNICTYTALVNAFARE----------------GLCEEAEEI------ 281
K+ N + + +P + L+ + E G+C + + I
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 282 --------------FEQL-QGAGIEPDVYAYN----ALMEAYRL-------ISRMHMGCE 315
FE+ + G++P + YN L+EA + + GC
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 316 PDRASYNIMVDAYGRAG 332
PD A+YN ++DAYG++G
Sbjct: 818 PDVATYNFLLDAYGKSG 834
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++ + + + PT TY LL +G +++A +F M + G PP+ + +N+ D L K
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+++ +M C P TY +I K + A+ F++M+ P+ T
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVT 679
Query: 262 YTALVNAFAREGLCEEAEEIF 282
L+ + L E+A +I
Sbjct: 680 LCTLLPGVVKASLIEDAYKII 700
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLL 200
+ EL +S P Y L++ S LE+A +F EM+ G+ P YNS I L
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G ++A +I+ ++R +P+ T+ +I Y + K A ++ M + PN
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 261 TYTALVN 267
TY L N
Sbjct: 1104 TYEQLPN 1110
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY LL+ A M A AV EM+K G P YN I+G K GN +KA+E+F
Sbjct: 253 TVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVF 312
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ M + + + TYT +I ++ + + +LFN +P++ Y AL+N+
Sbjct: 313 EEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG 372
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASY 321
G E A EI +++ I PD YN LM + L+ R+ G +PD SY
Sbjct: 373 GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSY 432
Query: 322 NIMVDAYGRAG 332
N ++ Y G
Sbjct: 433 NTLISGYSMKG 443
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 47/224 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDG------------ 198
P + TYA L+ +C G +E A VF EM G + PSAV+YN+ I G
Sbjct: 181 PDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQ 240
Query: 199 -----------------------LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
L A + + M+++ P TY ++IN Y
Sbjct: 241 YREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYC 300
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K AL++F EM + TYT+L+ F+R+G +E + +F GI PDV
Sbjct: 301 KEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVV 360
Query: 296 AYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAY 328
YNAL+ AY +++ M PD +YN ++ +
Sbjct: 361 MYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGF 404
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLK 201
LELL P TY ++ +C G ++ A V REMR + G+ P Y + I G K
Sbjct: 136 LELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCK 195
Query: 202 GGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G + AV++F M + PS Y +I Y K +AL+ +M +
Sbjct: 196 IGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVA 255
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY L++A + +A + E++Q G PDV+ YN L+ Y
Sbjct: 256 TYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGY 299
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ ++C G +E+A + EM K +PP + YN+ + G G +A +
Sbjct: 357 PDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTL 416
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + QP +Y +I+ Y AL++ +EM P + TY AL+ +
Sbjct: 417 IDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCK 476
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
++AE + +++ GI PD Y +L+E
Sbjct: 477 IRQGDDAENLMKEMVAKGITPDDSTYISLIE 507
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
D L NV+V+ K P V+M LI ++ ++A E+ R P + T
Sbjct: 344 DRLFNVAVK----KGIRPDVVMYNA---LINSHCTGGDMERAYEIMAEMEKKRIPPDDMT 396
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L++ +C+ G L++A + EM K G+ P V YN+ I G G+ + A+ + M
Sbjct: 397 YNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMM 456
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ TY +I K + A L EM + P+ TY +L+ EGL
Sbjct: 457 DKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI-----EGLTT 511
Query: 277 EAEEI 281
E E +
Sbjct: 512 EDERM 516
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A A+F ++ + LP +N + L G P +A+E+ ++M R P+ TY +I
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155
Query: 233 LYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-I 290
+ + AL++ EMR P+ TY L++ + + G E+A ++F+++ G +
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215
Query: 291 EPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDA 327
P YNAL+ Y + ++ + G A+YN+++ A
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE + E++ +P Y L+ +C G + A F EM + P + Y + I
Sbjct: 757 EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 816
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G + G+ +A ++F M +P T+T ++N Y KA A ++ N M C
Sbjct: 817 SGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS 876
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN+ TYT L++ +EG + A E+ ++ G++P+++ YN+++ EA +L
Sbjct: 877 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 936
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ G D +Y ++DAY ++G
Sbjct: 937 VGEFEAAGLNADTVTYTTLMDAYCKSG 963
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + K A + ++ + C P TY L+ C G L+ A + EM K G
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YNS ++GL K GN ++AV++ + T TYT +++ Y K+ + A
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM +P I T+ L+N F G+ E+ E++ + GI P+ +N L++ Y
Sbjct: 970 EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY 1029
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRA 331
+ + + G EPD +Y +V + A
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNA 1067
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V L++ + ++ + A + E+ P TY ++ +C G + +A +F
Sbjct: 774 TIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 833
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM GL P + + ++G K G+ + A + M + C P+ TYT +I+ K
Sbjct: 834 EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A +L +EM +PNI TY ++VN + G EEA ++ + + AG+ D Y
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953
Query: 299 ALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
LM+AY L + G +P ++N++++ + G+ E
Sbjct: 954 TLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ ++ YC G L+K + +M++ GL P++ Y S I L + +A E
Sbjct: 702 PDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEA 761
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P T YT +++ + K A K F EM S P++ TYTA+++ F +
Sbjct: 762 FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 821
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EA ++F ++ G+EPD+ + LM +A+R+ + M GC P+ +
Sbjct: 822 IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT 881
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 882 YTTLIDGLCKEG 893
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + Q +A + E+L P T+ L+ YC +G ++ A V M + G
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDGL K G+ A E+ M + QP+ TY ++N K+ A+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL E + + TYT L++A+ + G ++A+EI ++ G G++P + +N LM +
Sbjct: 935 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAY 328
+L++ M G P+ ++N +V Y
Sbjct: 995 CLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY 1029
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +++ C G + +A + M G P + Y++ I+G + G K ++ ++M
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ +P++ TY +I L + K A + F+EM P+ YT LV+ F + G
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
A + F ++ I PDV Y A++ EA +L M G EPD ++ +
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850
Query: 325 VDAYGRAG 332
++ Y +AG
Sbjct: 851 MNGYCKAG 858
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + KA+ E+L PT T+ +L+ +C+ G+LE E + M G
Sbjct: 955 LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A +N + N + A I++ M +P +TY ++ + A A
Sbjct: 1015 IAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAW 1074
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
LF EM+ ++ TY+ L+ F + EA EIF+Q++ G+ D
Sbjct: 1075 FLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD 1123
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ AYC SG ++KA+ + EM GL P+ V +N ++G G + ++ M
Sbjct: 951 TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T+ ++ Y + A ++ +M S +P+ TY LV
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+EA +F++++G G V Y+ L++ +
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 11/171 (6%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A VFRE + G+ + YN I + + G +A + M+ P +Y+ +IN
Sbjct: 653 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y + + KL +M+ KPN TY +++ R EAEE F ++ G GI P
Sbjct: 713 GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772
Query: 293 DVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
D Y L++ + + MH PD +Y ++ + + G
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 823
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ-KAVEIFQR 214
+ + + G+L +A VF +M YGL S N Y+ L K N A+ +F+
Sbjct: 600 VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+ +Y ++I+ + + A L M P++ +Y+ ++N + R G
Sbjct: 660 FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNI 323
++ ++ E+++ G++P+ Y Y +++ EA S M G PD Y
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779
Query: 324 MVDAYGRAG 332
+VD + + G
Sbjct: 780 LVDGFCKRG 788
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 11/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++K + G E+A +F EM + G+ PS V YNS++ L + G A+ +
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P+ TY L++ + K A KL +M H CK Y L+ +
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGK 303
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G +E E + +++ ++PDV YN L+ +AY+++ +M + GC+P+ A+
Sbjct: 304 TGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAAT 363
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y +M+D Y AG +G L HYP
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHYP 394
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 141 TYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
T L L +R I +T + L++ Y + L+EK +F +M + + +N ++ L
Sbjct: 102 TILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTL 161
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ KA EIFQ+ +P++ +Y +MI + K A LF+EM +P++
Sbjct: 162 VDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSV 221
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-------- 311
TY + + R+G + A +F+ + G P+ Y LME + I +
Sbjct: 222 VTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFD 281
Query: 312 ---MGCEPDRASYNIMVDAYGRAG 332
GC+ +Y +++ G+ G
Sbjct: 282 MEFHGCKLRPVNYGVLMTHLGKTG 305
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TYALL++ +C G ++A+ + +M +G V Y + L K GN + +
Sbjct: 254 PNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESL 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
MK+ +P TY +++N K K A K+ +M+ C PN TY +++ +
Sbjct: 314 LNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCN 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + A +I + +G P + + +L+
Sbjct: 374 AGDFDGAMKILNAMLMSGHYPHLKTFASLV 403
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+E + +K+A+ ++ C Y +L+ +G +++ E++ EM+K
Sbjct: 261 LLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P V YN ++ L K G A ++ +M+ C P+ TY +MI+ Y A A
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGA 380
Query: 244 LKLFNEMRSHKCKPNICTYTALV 266
+K+ N M P++ T+ +LV
Sbjct: 381 MKILNAMLMSGHYPHLKTFASLV 403
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 69/146 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y+ L+ S E E + +R + + ++ + I K +K +E+F +M
Sbjct: 83 SYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQM 142
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C + +++ +++N + A ++F + +PN +Y ++ + ++G
Sbjct: 143 PSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGW 202
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
E+A +F+++ G++P V YN+ +
Sbjct: 203 EQACNLFDEMLEKGVQPSVVTYNSFL 228
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A A+F + G Y+S I L + + I ++ + + + +I
Sbjct: 64 EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
YGKA ++LF++M S C + ++ L+N +A EIF+Q
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFR 183
Query: 292 PDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
P+ +YN +++ + L M G +P +YN + R G
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKG 235
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +++ YC +G + A + M G P + S + GLLKG N V
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYV 416
Query: 210 -EIFQRMKRDCCQPSTETYTLMI 231
+ + M++ + ET+ ++I
Sbjct: 417 CFVLEEMEKRQLRFDAETWRILI 439
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/147 (18%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+P +A+ +F+ + +Y+ +I ++ + + +R+ + N +
Sbjct: 61 DPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFV 120
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-M 312
AL+ + + L E+ E+F Q+ + ++N L+ +A + + + M
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEM 180
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCS 339
P+ SYNIM+ + + G E C+
Sbjct: 181 DFRPNSVSYNIMIKGWIKKGGWEQACN 207
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + + +A + EL + +PT +Y L+ C SG + + + EM
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PP V YN ID L K G +A+ + M + +P+ TY M++ Y + +A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+FN M +P+I Y L+N + + + +EA +F++++ + PD+ +YN+L++
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 304 YRLISRM-HM----------GCEPDRASYNIMVDAY 328
+ R+ H+ G PD +YNI++DA+
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E Y + +A + ++ P Y +L+ YC + ++++A +F+E+
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YNS IDGL G ++ M P TY ++I+ K + AL
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ M KPNI TY A+++ + A++IF ++ +G+EPD+ YN L+
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L M H PD ASYN ++D G
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T+ +L+ A C G + +A+ V M K G P V YN+ ++G N +A E+
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RM + +P Y ++I+ Y K A+ LF E+ + P I +Y +L++
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G +++ +++ G+ PDV YN L++A L+ M G +P+ +
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Query: 321 YNIMVDAY 328
YN M+D Y
Sbjct: 443 YNAMMDGY 450
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L++ YC + +A +F M K GL P + YN IDG K +A+ +
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ + P+ +Y +I+ + + KL +EM P++ TY L++A +
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
EG EA + + G++P++ YNA+M+ Y L + +++ G EPD +
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477
Query: 321 YNIMVDAY 328
YN++++ Y
Sbjct: 478 YNVLINGY 485
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + K A E+ S P Y+ L+ C G + A + ++ + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ AV YNS IDG G Q+ ++ +M R+ P T+ ++I+ K + A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M KP+I TY AL+ + EA E+F ++ G+EPDV YN L++ Y
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 305 ---RLISRMHM--------GCEPDRASYNIMVDAYGRAG 332
+++ + P ASYN ++D +G
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 14/227 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI Y +S H F+ L +L S P T+ ++ +C++G++ KA + +
Sbjct: 95 ILINCYFHQS-HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G Y + I+GL K G + A+ + Q M++ QP+ Y+ +I+ K
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-- 300
AL L +++ + TY +L++ G +E ++ ++ ++PD Y +N L
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 301 --------MEAYRLISRM-HMGCEPDRASYNIMVDAY-GRAGLHEGK 337
+EA +++ M G +PD +YN +++ Y R +HE +
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y ++ A+ + ++ S P Y +L+ YC + ++++A +F+EMR
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P YNS IDGL G E+ M P TY ++++ + K A+
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565
Query: 245 KLFNEMRS----------------------------------HKCKPNICTYTALVNAFA 270
LF ++ H C PN+ TYT L+NA
Sbjct: 566 SLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++G EA + +++ PD + ++
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 144 ELLDSRC----IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD C P TY +LL A+C + +KA ++FR++ + G+ P ++ +D L
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL 589
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
KG + A + + + C P+ +TYT++IN K A+ L ++M + P+
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
T+ ++ + ++AE++ E++ G+
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A F M + PP V++ + +++ G+ A+ +F +++ PS T+T+
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN Y S + A L + +PN+ T+ ++N F G+ +A + + L G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 290 IEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
D + Y L+ A L+ M +P+ Y+ ++D + G
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 46/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + LL A G A ++F +++ G+ PS + I+ + A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 212 FQRMKRDCCQPSTETYTLMIN----------------------------LYG-------K 236
+ + QP+ T+ +IN YG K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ AL L EM +PN+ Y+AL++ ++G +A + Q+ GI D
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 297 YNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
YN+L+ E +L+++M +PD ++NI++DA + G
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K AE LL C P TY +L+ A C G +A + +M PP A+ +
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
I LL+ KA ++ + M ++ N++ AS F ++ F
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNVFFPASSGFQSVTEF 707
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+NK + P V++ + L+ + K++ K + +E+L+S P Y ++ +C
Sbjct: 95 VNKGYTPDVIL--CTKLIKGFFNFKNIEKASRV--MEILESHTEPDVFAYNAVISGFCKV 150
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
+E A V M+ G P V YN I L A+++ ++ D C P+ TY
Sbjct: 151 NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T++I A+KL EM + P++ TY A++ +EG+ E A E+ L
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 270
Query: 288 AGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G +PDV +YN L+ A+ +L++ M GCEP++ +Y+I++ + R G
Sbjct: 271 KGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 326
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+LL C+PT TY +L++A + G + +A + EM GL P YN+ I G+ K G
Sbjct: 197 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A E+ + C+P +Y +++ + K KL EM S C+PN TY+
Sbjct: 257 MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+++ R G +EA + + + + PD Y+Y+ L+ A R+ +
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD +YN ++ A + G
Sbjct: 377 GCLPDIVNYNTILAALCKNG 396
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 153 TEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T DTY+ L+ A C G L+ A + M G P V YN+ + L K GN +A+E
Sbjct: 344 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 403
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF +++ C P+ +Y MI+ AL + M S P+ TY +L++
Sbjct: 404 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLC 463
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
R+GL EEA + + ++ +G P V +YN ++ +A + + M GC P+
Sbjct: 464 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 523
Query: 320 SYNIMVDAYGRAG 332
+Y ++++ G AG
Sbjct: 524 TYILLIEGIGFAG 536
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I ++ + ++A L C P +Y +LL+A+ G ++ E + EM G
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y+ I L + G +A+ + + M P T +Y +I+ K + +A+
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + M S+ C P+I Y ++ A + G +A EIF +L+G G P+V +YN ++ A
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ + + G +PD +YN ++ R GL E
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVE 469
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K + +EKA V E+ + P YN+ I G K + A ++ RMK
Sbjct: 109 LIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG 167
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P TY +MI K +ALK+ +++ C P + TYT L+ A EG EA
Sbjct: 168 FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 227
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
++ E++ G+ PD+Y YNA++ A LI+ + GC+PD SYNI++
Sbjct: 228 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILL--- 284
Query: 329 GRAGLHEGK 337
RA L++GK
Sbjct: 285 -RAFLNQGK 292
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+ + + E E+ C P + TY++L+ + C G +++A +V + M +
Sbjct: 282 ILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 341
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P Y+ I L K G A+ I M + C P Y ++ K + A
Sbjct: 342 ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA 401
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L++FN++R C PN+ +Y +++A G A + + G++PD YN+L+
Sbjct: 402 LEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISC 461
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMV 325
EA L+ M G P SYNI++
Sbjct: 462 LCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ C GL+E+A + +M + G P+ + YN + GL K A+ +
Sbjct: 450 PDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGM 509
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
F M C+P+ TY L+I G A A++L N + S
Sbjct: 510 FAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ A G +A + M G+ P + YNS I L + G ++A+
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M++ +P+ +Y +++ K + A+ +F EM C+PN TY L+
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Query: 270 AREGLCEEAEEIFEQL 285
G EA E+ L
Sbjct: 533 GFAGWRTEAMELANSL 548
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A + +EM G
Sbjct: 305 LLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G+ QKA + + M+ +P Y +MI+ +GK + A+
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAM 424
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
F+ MR + +P++ T+ L++A + G + A E+FE+++ + P YN ++
Sbjct: 425 DAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLL 484
Query: 302 -EAYR------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
E R ++S M G P+ +Y +VD YGR+G
Sbjct: 485 GEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG 523
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F MR+ + P V +N+
Sbjct: 386 QKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTL 445
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A+E+F+ M+ C P T TY +MINL G+ + + +EM+
Sbjct: 446 IDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGL 505
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY
Sbjct: 506 VPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + H +A + E+ +S C P TY +++ E EA+ EM++ G
Sbjct: 445 LIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQG 504
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y + +D + G ++A++ + MK D +PS Y ++N Y + + AL
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 564
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M++ + +I +L+NAF + EA + + ++ G+ PDV Y LM+A
Sbjct: 565 NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKAL 624
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDA 327
+ + + GC PDR + ++ A
Sbjct: 625 IRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSA 658
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM+
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS 398
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A++ F RM+ + +P T+ +I+ + K + A
Sbjct: 399 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRA 458
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++LF EMR C P TY ++N + E E + +++ G+ P++ Y L++
Sbjct: 459 MELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDV 518
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
Y R G +P Y+ +V+AY + GL
Sbjct: 519 YGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A G +AE +LE L P Y LLK Y G L+ AE V EM +
Sbjct: 269 LISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQC 328
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G K+
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM++ +P+ Y +++ F + A + F++++ IEPDV +N L
Sbjct: 389 FAVLR---EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTL 445
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++A+ L M C P +YNIM++ G EG
Sbjct: 446 IDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEG 492
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC----CQPSTETYTLMINLYG 235
+R++ P Y+ + LL +P A + +R+ D +P ++ +I+ +
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAA-LLERLLGDLRESRLEPDAPLFSDLISAFA 239
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDV 294
+A+ AL+L ++ P TAL++A G EAE +F + AG I+P
Sbjct: 240 RAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 295 YAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I + G PD A+Y+++VDAY RAG
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +Y + + E+ IP TY L+ +C SG L A+ +F+EM
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+PPS V Y +DGL G KA+EIF++M++ Y ++I+ ASK A
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF + KP++ TY ++ ++G EA+ +F +++ G PD + YN L+ A
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVD 326
+ LI M + G D ++ +++D
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ IP T++ L+ + G L +A+ ++ EM G+ P + YNS IDG K
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F M C+P TY+++IN Y KA + ++LF E+ S PN TY
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LV F + G A+E+F+++ G+ P V Y L++
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY +L C SG A +FR+M + + S V Y+ ID L K G+ A+ +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ + TY+ +I K K+ EM P++ T++AL++ F +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG EA+E++ ++ GI PD YN+L++ + + +H GCEPD +
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 321 YNIMVDAYGRA 331
Y+I++++Y +A
Sbjct: 388 YSILINSYCKA 398
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +++ +A + ++ C P TY++L+ +YC + ++ +FRE+ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + YN+ + G + G A E+FQ M PS TY ++++ + AL
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F +M+ + I Y +++ ++A +F L G++PDV YN ++
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAY-GRAGL 333
EA L +M GC PD +YNI++ A+ G +GL
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 576
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y++++ + C G + A ++F EM G+ V Y+S I GL G ++ + M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T++ +I+++ K K A +L+NEM + P+ TY +L++ F +E
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRASYNIMV 325
EA ++F+ + G EPD+ Y+ L+ +Y R+ M + G P+ +YN +V
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 326 DAYGRAG 332
+ ++G
Sbjct: 428 LGFCQSG 434
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ C G + + REM + P V +++ ID +K G +A E++ M
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P T TY +I+ + K + A ++F+ M S C+P+I TY+ L+N++ +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
++ +F ++ G+ P+ YN L+ + ++SR G P +Y
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR---GVPPSVVTY 458
Query: 322 NIMVDAYGRAG 332
I++D G
Sbjct: 459 GILLDGLCDNG 469
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ L+ +C+ G + +A A+ M + P V ++ I+GL G +A+ +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM QP TY ++N K+ S +AL LF +M K ++ Y+ ++++ +
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+G ++A +F +++ GI+ DV Y++L+ + +++ M PD +
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 321 YNIMVDAYGRAG-LHEGKCSYS 341
++ ++D + + G L E K Y+
Sbjct: 318 FSALIDVFVKEGKLLEAKELYN 339
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ L D P TY +++ C G L +A+ +FR+M++ G P YN I L
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG--KASKSFMAL 244
G +VE+ + MK + T ++I++ + KSF+ +
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDM 617
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + + +A + EL + +PT +Y L+ C SG + + + EM
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PP V YN ID L K G +A+ + M + +P+ TY M++ Y + +A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+FN M +P+I Y L+N + + + +EA +F++++ + PD+ +YN+L++
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 304 YRLISRM-HM----------GCEPDRASYNIMVDAY 328
+ R+ H+ G PD +YNI++DA+
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E Y + +A + ++ P Y +L+ YC + ++++A +F+E+
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ YNS IDGL G ++ M P TY ++I+ K + AL
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ M KPNI TY A+++ + A++IF ++ +G+EPD+ YN L+
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L M H PD ASYN ++D G
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T+ +L+ A C G + +A+ V M K G P V YN+ ++G N +A E+
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RM + +P Y ++I+ Y K A+ LF E+ + P I +Y +L++
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G +++ +++ G+ PDV YN L++A L+ M G +P+ +
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Query: 321 YNIMVDAY 328
YN M+D Y
Sbjct: 443 YNAMMDGY 450
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L++ YC + +A +F M K GL P + YN IDG K +A+ +
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ + P+ +Y +I+ + + KL +EM P++ TY L++A +
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
EG EA + + G++P++ YNA+M+ Y L + +++ G EPD +
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477
Query: 321 YNIMVDAY 328
YN++++ Y
Sbjct: 478 YNVLINGY 485
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ A C G + +A V M K G+ P+ V YN+ +DG N A +I
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RM + +P Y ++IN Y K A+ LF EMR P+I +Y +L++
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISR--------------- 309
G +E+ +++ +G PDV YN L++A+ + IS
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTN 582
Query: 310 ------------------------MHMGCEPDRASYNIMVDAYGRAG 332
MH GC P+ +Y I+++A + G
Sbjct: 583 HAIVDNLCKGEKLKMAEDALKHLLMH-GCSPNVQTYTILINALCKDG 628
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + K A E+ S P Y+ L+ C G + A + ++ + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ AV YNS IDG G Q+ ++ +M R+ P T+ ++I+ K + A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M KP+I TY AL+ + EA E+F ++ G+EPDV YN L++ Y
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 305 ---RLISRMHM--------GCEPDRASYNIMVDAYGRAG 332
+++ + P ASYN ++D +G
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 14/227 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI Y +S H F+ L +L S P T+ ++ +C++G++ KA + +
Sbjct: 95 ILINCYFHQS-HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G Y + I+GL K G + A+ + Q M++ QP+ Y+ +I+ K
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-- 300
AL L +++ + TY +L++ G +E ++ ++ ++PD Y +N L
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 301 --------MEAYRLISRM-HMGCEPDRASYNIMVDAY-GRAGLHEGK 337
+EA +++ M G +PD +YN +++ Y R +HE +
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y ++ A+ + ++ S P Y +L+ YC + ++++A +F+EMR
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P YNS IDGL G E+ M P TY ++++ + K A+
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565
Query: 245 KLFNEMRS----------------------------------HKCKPNICTYTALVNAFA 270
LF ++ H C PN+ TYT L+NA
Sbjct: 566 SLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++G EA + +++ PD + ++
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 144 ELLDSRC----IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD C P TY +LL A+C + +KA ++FR++ + G+ P ++ +D L
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL 589
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
KG + A + + + C P+ +TYT++IN K A+ L ++M + P+
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
T+ ++ + ++AE++ E++ G+
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A F M + PP V++ + +++ G+ A+ +F +++ PS T+T+
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN Y S + A L + +PN+ T+ ++N F G+ +A + + L G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 290 IEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
D + Y L+ A L+ M +P+ Y+ ++D + G
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 46/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + LL A G A ++F +++ G+ PS + I+ + A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 212 FQRMKRDCCQPSTETYTLMIN----------------------------LYG-------K 236
+ + QP+ T+ +IN YG K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ AL L EM +PN+ Y+AL++ ++G +A + Q+ GI D
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 297 YNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
YN+L+ E +L+++M +PD ++NI++DA + G
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K AE LL C P TY +L+ A C G +A + +M PP A+ +
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 196 IDGLLKGGNPQKAVEIFQRM 215
I LL+ KA ++ + M
Sbjct: 656 IGVLLQRNETDKAEKLREEM 675
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 13/204 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA+ + + P TY +L+ +C S ++++A +F+EM + + P V Y+S
Sbjct: 569 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSL 628
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPS-TETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+DGL K G ++ M RD QP+ TY +I+ K A+ LFN+M+
Sbjct: 629 VDGLCKSGRISYVWDLIDEM-RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
+PN T+T L++ + G ++A+E+F+ L G DVY YN ++ EA
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747
Query: 305 RLISRM-HMGCEPDRASYNIMVDA 327
++S+M GC P+ +++I+++A
Sbjct: 748 TMLSKMEENGCIPNAVTFDIIINA 771
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 19/254 (7%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKW---DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL 145
LPP+ DD +++SV ++ K+ D + L + + L ++ +++LH + +L
Sbjct: 35 LPPSIQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALH-----FHDKL 89
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L + +YA L+ C G A R++ P+ +YN+ ID L K
Sbjct: 90 LAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLV 149
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+A +F M + TY+ +I + K AL L N M PN+CTY L
Sbjct: 150 SEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNIL 209
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGC 314
V+A +EG +EA+ + + A ++ +V Y+ LM+ Y L+ + MG
Sbjct: 210 VDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 269
Query: 315 EPDRASYNIMVDAY 328
PD SYNIM++ +
Sbjct: 270 TPDVHSYNIMINGF 283
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + + +A + E+ +P TY+ L+ C SG + + EMR
Sbjct: 592 ILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDR 651
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + YNS IDGL K G+ KA+ +F +MK +P+T T+T++++ K + A
Sbjct: 652 GQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 711
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F ++ + ++ Y ++ ++GL EEA + +++ G P+ ++ ++ A
Sbjct: 712 QEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINA 771
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T +L+ +C G + +V ++ K G PPS V N+ I GL G +KA+
Sbjct: 340 PDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHF 399
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ Q + +Y +IN K + A+KL ++ KPN+ Y+ +++A +
Sbjct: 400 HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 459
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
L EA +F ++ GI DV Y+ L+ EA L++ M + PD +
Sbjct: 460 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRT 519
Query: 321 YNIMVDAYGRAG 332
Y I+VDA G+ G
Sbjct: 520 YTILVDALGKEG 531
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ K KKA + +LL + +YA L+ C G A + R++
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ +Y++ ID L K +A +F M TY+ +I + K A+
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L NEM P++ TYT LV+A +EG +EA+ + + A ++PDV+ YN LM Y
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRAGL 333
L+ + MG PD +Y I+++ + ++ +
Sbjct: 563 LLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKM 602
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ +C+ G L++A + EM + P Y +D L K G ++A + M
Sbjct: 484 TYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM 543
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C +P TY ++N Y + A +FN M P++ TYT L+N F + +
Sbjct: 544 LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMV 603
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGCEP-DRASYNIM 324
+EA +F+++ + PD Y++L++ + LI M +P D +YN +
Sbjct: 604 DEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSL 663
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 664 IDGLCKNG 671
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ A G +++A++V M K + P YN+ ++G L +KA +
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P TYT++IN + K+ AL LF EM P+ TY++LV+ +
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRAS 320
G ++ ++++ G DV YN+L++ A L ++M G P+ +
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694
Query: 321 YNIMVDAYGRAG 332
+ I++D + G
Sbjct: 695 FTILLDGLCKGG 706
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C +G L+KA A+F +M+ G+ P+ + +DGL KGG + A E+FQ +
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
Y +MI YG + + AL + ++M + C PN T+ ++NA ++
Sbjct: 719 LTKGYHLDVYIYNVMI--YGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKD 776
Query: 274 LCEEAEEIFEQLQGAGI 290
++AE++ Q+ G+
Sbjct: 777 ENDKAEKLLRQMIARGL 793
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T L+K C+ G ++KA ++ G + V Y + I+G+ K G+ + A+++
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++ +P+ E Y+ +I+ K A LF+EM ++ TY+ L+ F
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 494
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC-EPDRAS 320
G +EA + ++ I PDV Y L+ EA +++ M C +PD +
Sbjct: 495 VGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFT 554
Query: 321 YNIMVDAY 328
YN +++ Y
Sbjct: 555 YNTLMNGY 562
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ A C G +++A++V M K + + + Y++ +DG +KA +
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P +Y +MIN + K + AL LF EM + P I + ++++FA+
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAK 319
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
A + +L+ GI+PD++ N L+ + HMG
Sbjct: 320 MKHYSTAVSLSHRLELKGIQPDLFTLNILINCF-----CHMG 356
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ +C+ G L++A + M + P+ YN +D L K G ++A + M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C + + TY+ +++ Y + A +FN M P++ +Y ++N F +
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIM 324
++A +F+++ + P + +N +++++ L R+ + G +PD + NI+
Sbjct: 290 DKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNIL 348
Query: 325 VDAYGRAG 332
++ + G
Sbjct: 349 INCFCHMG 356
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 21/250 (8%)
Query: 99 LINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE-DTY 157
L+NV V K +P V C +L++A ++ K+A+ + L ++ C+ + TY
Sbjct: 190 LLNVMVL----KTINPNV---CTYNILVDALCKEGKVKEAK-SVLAVMLKACVKSNVITY 241
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+ L+ Y + ++KA+ VF M G+ P YN I+G K KA+ +F+ M
Sbjct: 242 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMIL 301
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
P + + +++ + K A+ L + + +P++ T L+N F G
Sbjct: 302 SRFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVD 326
+ ++ G P N L++ L + + G + ++ SY +++
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420
Query: 327 AYGRAGLHEG 336
+ G G
Sbjct: 421 GVCKIGDTRG 430
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + KA + ++ D P T+ +LL C G L+ A+ VF+++ G
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+YN I G K G ++A+ + +M+ + C P+ T+ ++IN K ++ A
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAE 782
Query: 245 KLFNEM 250
KL +M
Sbjct: 783 KLLRQM 788
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA+ + + P +Y +++ +C ++KA +F+EM PP + +N
Sbjct: 255 KKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKI 313
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D K + AV + R++ QP T ++IN + + + ++
Sbjct: 314 LDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGY 373
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
P+ T L+ +G ++A ++L G + + +Y L+ A +
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
L+ ++ +P+ Y+ ++DA C Y LV
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDAL---------CKYQLV 463
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++C G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN ++T L++ ++G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI+ M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGDLETAFEY 333
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L LN+ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P ++ L+ +C G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C +G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+ +
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVS 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKNGDLKQAQDLINE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 99/184 (53%), Gaps = 11/184 (5%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+L++ C +G +A + ++ + G+ ++YN+ L + +++++MK D
Sbjct: 255 MLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDG 314
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P TY ++I+ +G+A K + A+K+F E+ + CKP+I +Y +L+N + G +EA
Sbjct: 315 PLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAH 374
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAY 328
F ++Q G+ PDV Y+ L+E + ++ M GC P+ +YNI++D
Sbjct: 375 IRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCL 434
Query: 329 GRAG 332
R+G
Sbjct: 435 ERSG 438
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +L+ ++ +G + +A +F E+ P + YNS I+ L K G+ +A
Sbjct: 316 LPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHI 375
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F+ M+ P TY+ +I +GK K MA +LF+EM + C PNI TY L++
Sbjct: 376 RFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLE 435
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EA +++ +L+ G+ PD Y+ L
Sbjct: 436 RSGRTAEAVDLYAKLKQQGLTPDSITYSVL 465
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++AY S + V+ EM++ G +N +D L K +A ++F+ M
Sbjct: 44 TYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDM 103
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+P TYT+MI + G+ K +L LF EM + C PN+ Y ++ A A +
Sbjct: 104 KKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMV 163
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ +F ++ P+ + Y+ ++ ++H
Sbjct: 164 DKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLH 199
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 43/252 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + +A + ++ C P E TY ++++ G L+++ A+F EM
Sbjct: 82 MLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNK 141
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG-------- 235
G P+ + YN+ I L K + +F +M C+P+ TY++++ L
Sbjct: 142 GCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKL 201
Query: 236 ----KASKSFM--------------------ALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ S+ +M A +LF M S+ + + +++ +
Sbjct: 202 DKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLCN 261
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRMHM-GCEPDRAS 320
G EA ++ ++ GI D YN + A Y L +M + G PD +
Sbjct: 262 AGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFT 321
Query: 321 YNIMVDAYGRAG 332
YNI++ ++GRAG
Sbjct: 322 YNILISSFGRAG 333
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
E E + K+ L + Y + L+ + ++ MKR + ++
Sbjct: 24 EDLERCIGLIEKWDLKMNGYTYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNML 83
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
++ K K A K+F +M+ C+P+ TYT ++ R G +E+ +FE++ G
Sbjct: 84 LDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGC 143
Query: 291 EPDVYAYNALMEAY---RLISR--------MHMGCEPDRASYNIMVDAYGRAG-LHEGKC 338
P++ AYN +++A R++ + M C P+ +Y++++ G LH+
Sbjct: 144 SPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKLD- 202
Query: 339 SYSLVELSVKH 349
+VELS K+
Sbjct: 203 --KVVELSRKY 211
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 74/142 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ +A + EL +S C P +Y L+ +G L++A FREM++
Sbjct: 324 ILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEK 383
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F M + C P+ TY ++++ ++ ++ A
Sbjct: 384 GLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEA 443
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +++ P+ TY+ L
Sbjct: 444 VDLYAKLKQQGLTPDSITYSVL 465
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C+P T+ ++ YC +G LE A AV+ +M G+ P+ V YN I+G K G+
Sbjct: 318 DGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLG 377
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AVE++Q+M R C P T++ +I+ Y + + AL+++++M H+ +PN+ T++ ++
Sbjct: 378 SAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIII 437
Query: 267 NAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEAY---------RLISR--MHMGC 314
++ ++ +EA + +L I P + YN +++ LI + GC
Sbjct: 438 HSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGC 497
Query: 315 EPDRASYNIMVDAY 328
PD+ +Y I++ Y
Sbjct: 498 RPDKYTYTILIIGY 511
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + A Y +++ S +P TY +L+ Y G L A V+++M +
Sbjct: 331 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 390
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP V ++S IDG + G A+ I+ M + QP+ T++++I+ K ++S A+
Sbjct: 391 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 450
Query: 245 KLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L NE+ P Y +++ + G +EA I + ++ G PD Y Y L+
Sbjct: 451 CLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 510
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGL 333
Y + SR+ GC PD + N + +AG+
Sbjct: 511 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 551
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 157 YALLLKAYCMSGLLEKAEAVF-REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y L+ + G + A+F R ++ P +N I G+ + G QKA+E+ +RM
Sbjct: 221 YNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM 280
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGL 274
C P T T+ ++++ + ++ ++ + R C PN+ T+T++++ + + G
Sbjct: 281 NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGK 340
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHMGCEPDRASY 321
E+A ++ + +GI P+ YN L+ E Y+ ++R+ C PD ++
Sbjct: 341 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR--CPPDVVTF 398
Query: 322 NIMVDAYGRAG 332
+ ++D Y R G
Sbjct: 399 SSLIDGYCRCG 409
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A Y ++ RC P T++ L+ YC G L+ A ++ +M ++
Sbjct: 365 VLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQH 424
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFM 242
+ P+ ++ I L K +A+ + + R P Y +I++ K K
Sbjct: 425 RIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 484
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A + M C+P+ TYT L+ + + EA F ++ AG PD N +
Sbjct: 485 ANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 544
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L+ + + LL+ + + + ++G A YN + L+ G V +
Sbjct: 181 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 240
Query: 212 FQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F+R +D P ++ ++I + + AL+L M C P+ T+ +V+
Sbjct: 241 FERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLC 300
Query: 271 REGLCEEAEEIFEQLQGAGI-EPDVYAYNALMEAY----RLISRMHM-------GCEPDR 318
R E+ +LQ G+ P+V + +++ Y +L M + G P+
Sbjct: 301 RTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNT 360
Query: 319 ASYNIMVDAYGRAG 332
+YN++++ YG+ G
Sbjct: 361 VTYNVLINGYGKVG 374
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 131/263 (49%), Gaps = 17/263 (6%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSI-LLIEAYGQKSLHK-----KAEF 140
+ + P T+ ++N+ V K D IV +S I I AY ++L K +A
Sbjct: 330 NDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISKKYINKQIYAYFVRTLSKVGHASEAHR 389
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ + + +D +L++ C +G + +A + ++ + G+ ++YN+ L
Sbjct: 390 LFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALG 449
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ +++++MK+D P TY ++I+ +G+A + +A+K F E+ + CKP++
Sbjct: 450 RLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVI 509
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE----- 315
+Y +L+N + G +EA F+++Q G+ PDV Y+ L+E + ++ M C
Sbjct: 510 SYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM 569
Query: 316 ------PDRASYNIMVDAYGRAG 332
P+ +YNI++D R+G
Sbjct: 570 LAEECTPNLITYNILLDCLERSG 592
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ ++ +G ++ A F E+ P + YNS I+ L K G+ +A F+ M
Sbjct: 475 TYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEM 534
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P TY+ +I +GK K MA +LF+EM + +C PN+ TY L++ R G
Sbjct: 535 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRT 594
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNAL 300
EA +++ +L+ G+ PD Y L
Sbjct: 595 AEAVDLYAKLKQQGLTPDSITYAVL 619
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+AY + A V+ +M ++G YN +D L K + ++F+ M
Sbjct: 199 TYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLDALAKD-EKVCSYKVFEDM 257
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR C+P TYT+MI + GK+SK+ AL LF M + C PN+ Y ++ A A+ +
Sbjct: 258 KRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMV 317
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
++A +F ++ I+P+ + Y+ ++
Sbjct: 318 DKAVLLFSKMVENDIQPNEFTYSVIL 343
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 43/226 (19%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++++ S ++A A+F+ M G P+ + YN+ I+ L KG KAV
Sbjct: 262 CEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAV 321
Query: 210 EIFQRMKRDCCQPSTETYTLMINLY---GK---------ASKSFM--------------- 242
+F +M + QP+ TY++++NL GK SK ++
Sbjct: 322 LLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISKKYINKQIYAYFVRTLSKV 381
Query: 243 -----ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A +LF M + K + +++ + G EA ++ ++ GI D Y
Sbjct: 382 GHASEAHRLFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMY 441
Query: 298 NALMEA---YRLISRMH--------MGCEPDRASYNIMVDAYGRAG 332
N + A + IS +H G PD +YNI++ ++GRAG
Sbjct: 442 NTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAG 487
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 72/142 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ A + EL +S C P +Y L+ +G +++A F+EM++
Sbjct: 478 ILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEK 537
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F M + C P+ TY ++++ ++ ++ A
Sbjct: 538 GLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEA 597
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +++ P+ TY L
Sbjct: 598 VDLYAKLKQQGLTPDSITYAVL 619
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 189 AVVYNSYIDGLLKGGNPQK---AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
+ YN L K NP + A + M R + S T +++ +G +
Sbjct: 127 SFTYNRLFLILSKSTNPARFDQARSLLHDMDRRAVRGSISTVNILVGFFGAGEDLERCVS 186
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-- 303
L ++ + N TY L+ A+ R A ++ + G D++ YN L++A
Sbjct: 187 L---VKKWDLRLNAYTYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLDALA 243
Query: 304 -------YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y++ M CEPD +Y IM+ G++
Sbjct: 244 KDEKVCSYKVFEDMKRRHCEPDVFTYTIMIRMTGKSS 280
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 14/192 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ ++ C +G L A +F EM P+A+ YNS I G + G+ +A+ +
Sbjct: 253 PDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRL 309
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M D C P TYT +++ + K + A +LF +M ++K P++ T+T+LV+
Sbjct: 310 LGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCG 369
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRAS 320
EG E+A E+ E++ G P +Y YN +++ Y L++ G P+ +
Sbjct: 370 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVT 429
Query: 321 YNIMVDAYGRAG 332
YNI+V RAG
Sbjct: 430 YNILVAGCCRAG 441
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 50/232 (21%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS--------- 194
E++ +R +P T +++++ C+ ++ A + EM G+ +A+ Y++
Sbjct: 174 EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 233
Query: 195 ---------------------------YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
IDGL K G + AV+IF+ M C P+ TY
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITY 290
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I Y +A A++L +M C P++ TYT L++AF + G ++A E+F+Q+
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350
Query: 288 AGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAY 328
+ PDV + +L++ RM GC P +YN +VD Y
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 107 RLNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
RL D MSC LI Y + +A +++D C P TY L+
Sbjct: 270 RLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLM 329
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
A+C G L+ A +F++M L P V + S +DGL G + A+E+ + + R C
Sbjct: 330 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 389
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P+ TY +++ Y K+++ A +L + RS PN TY LV R G ++A +
Sbjct: 390 PTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 449
Query: 282 FEQL--QGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAY 328
+QL +G V Y +++A R + G P A++ +V A
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509
Query: 329 GRAGLHEGKCSYSLVELSVK--HYPA 352
+A H+ + ++ L+E +K H P
Sbjct: 510 CKA--HQPQQAHELLEEMIKYGHTPG 533
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 103/222 (46%), Gaps = 13/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ + A + +++ ++ P T+ L+ C G +E A + E+ + G
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ YN +DG K +KA E+ + P+T TY +++ +A ++ AL
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447
Query: 245 KLFNEMRSH--KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+ +++ S C ++ Y +++A R+G ++A + +E++ G P + ++
Sbjct: 448 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 507
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+A+ L+ M G P + + +V AY RAG+
Sbjct: 508 ALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 549
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +++ C +G L A V+R+M PP + Y + GL K G + AV++ Q M
Sbjct: 118 HNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMV 176
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T T+++ + A +L EM N TY+ALV+ + CE
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK---CE 233
Query: 277 EAEEIFEQLQGA----GIEPDVYAYNALMEAYRLISRM--------HMGCEPDRASYNIM 324
+E L G G PD+ Y+ +++ R+ M C P +YN +
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSL 293
Query: 325 VDAYGRAG 332
+ Y RAG
Sbjct: 294 IGGYCRAG 301
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 140 FTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
YL+ L+S C + YA++L A C G + A + EM + G P+A + + +
Sbjct: 447 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 506
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
L K PQ+A E+ + M + P T +++ Y +A A +L +E+R
Sbjct: 507 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 3/167 (1%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEK-AEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+LD+ T+A++L+ S L + E+R GL P V N+ + L
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+ +F +M T TY +I+ KA A+ L +M+S P +
Sbjct: 61 DTTTAMALFDKMAELGAVNHT-TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
++ R G A ++ Q+ A PD Y L+ R+
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRL 165
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%)
Query: 107 RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
+LN + P + ++++A + A Y E++ +P T+A ++ A C
Sbjct: 452 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 511
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ ++A + EM KYG P ++ + + G QKA E+ ++
Sbjct: 512 AHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKY 183
++ +YGQ+ + K E + + ++ T++ ++ A+ +G ++KA F +
Sbjct: 212 MVHSYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAAT 271
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS + + + L G + + +MKR +PST Y +IN +GKA
Sbjct: 272 GGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSM 331
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ F MR ++ TY L++ +A+ G EAE+ + ++ G++P +Y +LM+A
Sbjct: 332 MDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDA 391
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
Y RLISRM G PD +N+++D YGR G E
Sbjct: 392 YTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPE 434
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 23/236 (9%)
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P+ L V +L++ YG+ ++ ++ + P TY +L+ A+ +G L +
Sbjct: 95 PVPL--AVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRM 152
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR---DCCQPSTETYTLM 230
+ +MR+ GL P+ VVY S I L K G+ F M+R D +P+ TY M
Sbjct: 153 WQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAM 212
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNIC----TYTALVNAFAREGLCEEAEEIFEQLQ 286
++ YG+ L MR+ P + T++A+V A++R G ++A E F+ +
Sbjct: 213 VHSYGQQQMMDKMEALVERMRAD---PGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIA 269
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
G +P ++A+ A++ E R + +M +G +P A YN +++A+G+A
Sbjct: 270 ATGGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKA 325
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P V++ + G + G+ Q+ ++ + M+ +P TYT++I+ +GKA +
Sbjct: 95 PVPLAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQ 154
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ---GAGIEPDVYAYNALME 302
+ +MR +PN+ YT+++ + G E F ++Q G G+EP+ YNA++
Sbjct: 155 AWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVH 214
Query: 303 AY----------RLISRMHM--GCEPDRASYNIMVDAYGRAG 332
+Y L+ RM G D +++ +V A+ RAG
Sbjct: 215 SYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAG 256
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ Y ++ A+ + + F+ MR+ G+ YN+ ID K G +A +
Sbjct: 310 PSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKF 369
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MKR+ QP+ T +++ Y +A + L+L + M+ P+ + L++ + R
Sbjct: 370 YVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGR 429
Query: 272 EGLCEEAEEIF-EQLQGAGIEPDVYAYNALMEAY 304
G EEAE++ ++ GI + + +++EA+
Sbjct: 430 MGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAW 463
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +AE Y+ + PT T A L+ AY + EK + M+K G
Sbjct: 353 LIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEG 412
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIF-QRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VV+N ID + G P++A ++ MK T +T +I + + A
Sbjct: 413 RAPDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKA 472
Query: 244 LKLFNEMRS-HKCKPNICTYTALVN 267
+ + M + + KP+I T T L++
Sbjct: 473 EEWLHRMNTDYATKPDIKTLTTLLS 497
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
Query: 143 LELLDS------RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ELL+S +C P TY ++ +Y + G +E +AVF M G+ P+ V YN+ +
Sbjct: 315 IELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALL 374
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G A+ IF+ +K++ +P +YT ++N YG++ + A + F EMR + C+
Sbjct: 375 GAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCR 434
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
PNI +Y AL++A+ G+ +EA + +++ GI PDV + + L+ A
Sbjct: 435 PNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTA 481
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 52/262 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + S +A + E+ + RC P D Y L+ A+ +G A + +M +
Sbjct: 160 MMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRA 219
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---- 239
+PPS YN+ I+ GN +KA+E+ ++M R+ P T+ ++++ + S+
Sbjct: 220 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKA 279
Query: 240 ---------------SFM----------------ALKLFNEMRSHK--CKPNICTYTALV 266
+F A++L N MR + C P++ TYT+++
Sbjct: 280 IAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIM 339
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-MHM------------G 313
+++ G E+ + +F+ + G++P++ +YNAL+ AY SR MH G
Sbjct: 340 HSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAY--ASRGMHADALGIFKLLKQNG 397
Query: 314 CEPDRASYNIMVDAYGRAGLHE 335
PD SY +++AYGR+G E
Sbjct: 398 LRPDVVSYTTLLNAYGRSGQPE 419
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++L A+ KA A F M+ + P N I L+K G +A+E+
Sbjct: 258 PDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIEL 317
Query: 212 FQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
M KR C P TYT +++ Y K +F+ M + KPNI +Y AL+ A+
Sbjct: 318 LNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAY 377
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDR 318
A G+ +A IF+ L+ G+ PDV +Y L+ AY M C P+
Sbjct: 378 ASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNI 437
Query: 319 ASYNIMVDAYGRAGL 333
SYN ++DAYG AG+
Sbjct: 438 VSYNALIDAYGSAGM 452
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL AY G+ A +F+ +++ GL P V Y + ++ + G P+KA E
Sbjct: 365 PNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREA 424
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+++ C+P+ +Y +I+ YG A A+ L +EM P++ + + L+ A R
Sbjct: 425 FKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGR 484
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNA-------------LMEAYRLISRMHMGCEPDR 318
+ + I E + GI+ ++ YN+ +E Y ++ M PD
Sbjct: 485 CRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVM--MASNVNPDA 542
Query: 319 ASYNIMVDAYGRAG 332
+YNI++ + G
Sbjct: 543 VTYNILISGLCKVG 556
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 88 SLPPTHATWDDLINV-------SVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLH 135
++PP+ T++++IN L L KK P ++ + ++ A+ S +
Sbjct: 220 AIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNI---VLSAFKNGSQY 276
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV-----FREMRKYGLPPSAV 190
KA Y E++ I DT+ L + +C+ + EA+ RE R PP V
Sbjct: 277 SKA-IAYFEMMKGANI-APDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQ-CPPDVV 333
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y S + G + +F M + +P+ +Y ++ Y AL +F +
Sbjct: 334 TYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLL 393
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------ 304
+ + +P++ +YT L+NA+ R G E+A E F++++ P++ +YNAL++AY
Sbjct: 394 KQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMF 453
Query: 305 -RLISRMHM----GCEPDRASYNIMVDAYGR 330
IS +H G PD S + ++ A GR
Sbjct: 454 KEAISLLHEMEKDGIPPDVVSISTLLTACGR 484
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H F +++ ++ C D Y ++++ + +++A +F EM+++ P A +YNS
Sbjct: 137 HAVHVFRWMKNQENYC-ARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNS 195
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I + G + A+ I M R PS TY +IN G A AL+L +M +
Sbjct: 196 LIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNG 255
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
P++ T+ +++AF +A FE ++GA I PD + N ++ EA
Sbjct: 256 VGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAI 315
Query: 305 RLISRM---HMGCEPDRASYNIMVDAY 328
L++ M C PD +Y ++ +Y
Sbjct: 316 ELLNSMREKRTQCPPDVVTYTSIMHSY 342
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG + K+A E+ P + + LL A + K + + + G
Sbjct: 443 LIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRG 502
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V YNS I L G+ KA+E++ M P TY ++I+ K K +L
Sbjct: 503 IKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESL 562
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K F +M + Y++L+ ++ ++G EAE F ++ +G PDV Y A++EAY
Sbjct: 563 KFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAY 622
Query: 305 R----------LISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
L M +PD + +++A R HE
Sbjct: 623 NDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHE 664
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + +H A + L + P +Y LL AY SG EKA F+EMRK
Sbjct: 373 LLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNS 432
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ ID G ++A+ + M++D P + + ++ G+ +
Sbjct: 433 CRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKID 492
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ +S K NI Y + + ++ G +A E++ + + + PD YN L+
Sbjct: 493 TILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILI 549
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 35/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +Y ++ +AE T+ + +S C+P TY +++AY G A +F+EM
Sbjct: 583 LICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNT 642
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------------- 227
+ P A++ +S ++ L +G ++ +++ + MK C + + Y
Sbjct: 643 VQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTAS 702
Query: 228 ----------------TL--MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
TL ++ GK K+ +KLF +M S + TYT L+
Sbjct: 703 EIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNL 762
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + E+ + ++ AG+ P +Y Y ++
Sbjct: 763 LAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVL 794
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+ KA Y ++ S P TY +L+ C G ++ F +M +P + VY+S
Sbjct: 523 YGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSS 582
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I +K G +A F MK C P TYT MI Y A LF EM +
Sbjct: 583 LICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNT 642
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+P+ ++L+ A R E ++ E ++ I + AY
Sbjct: 643 VQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAY 685
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ------------LRLNKKWD 113
+ L ++Q+E I D F+ P T++ +N Q + + + D
Sbjct: 267 VEDALGYIQQE-----IADGFE---PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P V + + + GQ ++A+ +++D C+P T+ L+ A C LE+A
Sbjct: 319 PDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ R++ G+ P +N I+ L K G+P A+ +F+ MK C P TY +I+
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K AL L +M S C + TY +++ ++ EEAEE+F+Q+ GI +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+N L+ +A+ LI++M G +P+ +YN ++ Y + G
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQG 545
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ C T+ T +L+ YC G +E A ++ G P + YN++++GL + +
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ M ++ P TY +++N K + A + N+M C P+I T+
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
L+ A EEA ++ Q+ G+ PDVY +N L+ A RL M + G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 314 CEPDRASYNIMVD 326
C PD +YN ++D
Sbjct: 422 CTPDEVTYNTLID 434
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ +S C P E TY L+ C G L KA + ++M G P S + YN+ IDGL K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F +M + T+ +I+ K K A L N+M S +PN T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNIT 533
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y +++ + ++G ++A +I E + G E DV Y L+ A +++ M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 312 M-GCEPDRASYNIMVDAYGR 330
+ G P +YN ++ + R
Sbjct: 594 IKGMRPTPKAYNPVLQSLFR 613
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
DLI +Q + D +V +++L+ + S K E Y E+ P T+
Sbjct: 130 DLILNQLQPLFGIQADTVVYNHLLNVLV-----EGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
L+KA C + + A + EM G+ P + + + G ++ G+ + A+ + RM
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
C + T ++IN Y K + AL + + +P+ TY VN +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 278 AEEIFEQLQGAGIEPDVYAYN----------ALMEAYRLISRM-HMGCEPDRASYNIMVD 326
A ++ + + G +PDV+ YN L EA ++++M GC PD ++N ++
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 327 A 327
A
Sbjct: 365 A 365
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 13/213 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + Y +++ G L+ + + EMR+ G V +S++D AV++
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 212 F--QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
Q Q T Y ++N+ + SK + +++EM + KP++ T+ L+ A
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
R A + E++ G+ PD + LM+ + R+ +RM MGC +
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ N++++ Y + G E Y E++ P
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ C ++ A + +M GL P+ + YNS + K G+ +KA +I + M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +IN KA ++ +ALK+ MR +P Y ++ + R
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+A +F ++ G PD Y + +R + R G P + +++ M++ + + E
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIV---FRGLCR---GGGPIKEAFDFMLEMVDKGFIPE 671
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L YC G ++KA + M G V Y + I+GL K G Q A+++
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +P+ + Y ++ + + AL LF EM P+ TY + R
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648
Query: 272 -EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G +EA + ++ G P+ ++ L E
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMH 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P TY+++IN K SK A KLF+EM PN T+T L++ + G +
Sbjct: 205 ASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YNAL+ +A+ LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 158 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVY 213
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P V YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 274 LSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM + GL P++V + + IDG K G A+EI
Sbjct: 210 PDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEI 269
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 270 YKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCK 329
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG + A E + + I D AY AL+ +A +++ M +G +PD +
Sbjct: 330 EGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRT 389
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 390 YTMIINEFCKKG 401
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 144 ELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD + P TY ++ YC SG L +A +F EM+ GL P + VY + +DG
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC---- 255
+ + ++A+ IF K+ C ST + +IN K K+ + ++ N +
Sbjct: 743 CRLNDVERAITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR------ 309
KPN TY +++ +EG E A+E+F Q+Q A + P V Y +L+ Y + R
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 310 -----MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+ G EPD Y+++++A+ L EG + +LV
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAF----LKEGMTTKALV 896
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 10/223 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y +K +A Y ++D + TY +L+ + ++ AE +FREMR G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y I+G K GN QKA IF M + P+ Y +++ + ++ + A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L +EM PN TY +++ + + G EA +F++++ G+ PD + Y L++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 303 --------AYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGK 337
A + GC A +N +++ + G E K
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + S A+ E+ + +P + L+ YC G + +A + +R M G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ A Y ++GL K A EIF+ M+ P +Y ++IN + K A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
+F+EM PN+ Y L+ F R G E+A+E+ +++ G+ P+ Y
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 298 ---NALMEAYRLISRMHM-GCEPDRASYNIMVDA 327
L EA+RL M + G PD Y +VD
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S C P Y L+K + + A V +EM++ G+ P YNS I GL K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN--ICT 261
+A M + +P+ TY I+ Y +AS+ A K EMR PN +CT
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 262 ---------------------------------YTALVNAFAREGLCEEAEEIFEQLQGA 288
YT L+N + ++AEEIF +++G
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 289 GIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGK 337
GI PDV++Y L+ + + M G P+ YN+++ + R+G E K
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE-K 680
Query: 338 CSYSLVELSVK 348
L E+SVK
Sbjct: 681 AKELLDEMSVK 691
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C + L+I K + + F +E++++ P TY + Y + A+ +E
Sbjct: 489 CYNSLIIGLSKAKRMDEARSF-LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
MR+ G+ P+ V+ I+ K G +A ++ M +TYT+++N K K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A ++F EMR P++ +Y L+N F++ G ++A IF+++ G+ P+V YN
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ +A L+ M + G P+ +Y ++D Y ++G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
++ + +KA+ + ++ S IP YA L++ YC + + + EM+K + S
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y + + G+ G+ A I + M C+P+ YT +I + + S+ A+++ EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ P+I Y +L+ ++ +EA ++ G++P+ + Y A + Y
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY +++ C G LE A+ +F +M+ L P+ + Y S ++G K G + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-----CKPNICTYTALV 266
F +P Y+++IN + K + AL L ++M + CK +I T AL+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ FA+ G E AE++ E + PD
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y ++ ++ +E+ + + TY ++K C SG L+ A + +EM G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V+Y + I L+ A+ + + MK P Y +I KA + A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EM + KPN TY A ++ + A++ ++++ G+ P+ L+ Y
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 305 RLISRMHMGCEPDRASYNIMVD 326
++ C ++Y MVD
Sbjct: 568 CKKGKVIEAC----SAYRSMVD 585
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 156 TYALLLKAYCMSG-------LLEKAEAVFR--------------EMRKYGLPPSAVVYNS 194
TY +L+ A+C +G +L K E FR M GL P Y+
Sbjct: 223 TYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDV 282
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDGL K + A + M TY+L+I+ K + A L +EM SH
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC 314
Y + ++EG+ E+A+ +F+ + +G+ P AY +L+E Y + G
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 315 E--PDRASYNIMVDAYGRAGLHEGKCS 339
E + NI++ Y + +G CS
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCS 429
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + ++ ++ +PT TY LL Y G + VF E G+ P ++Y+ I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 198 GLLKGGNPQKAVEIFQRM-----KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
LK G KA+ + +M D C+ S T +++ + K + +A K+ M
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943
Query: 253 HKCKPNICTYTALVN 267
+ P+ T L+N
Sbjct: 944 LQYIPDSATVIELIN 958
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 19/231 (8%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
DP VL S L+ A +K L +A+ + + S P Y L+ A+C +G L+K
Sbjct: 209 DPAVLAS-----LLGALSKKRLAGEAQALF-DSYKSVFPPDVVLYTTLVHAWCRAGCLDK 262
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
AE VF EM++ G+ P+ Y S ID + + G +A E+ +M C P+T T+ ++
Sbjct: 263 AEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIMR 322
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC--EEAEEIFEQLQGAGI 290
+ KA +S L++ N+MR C P+I TY L+ +G + A ++ ++ G
Sbjct: 323 AHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGC 382
Query: 291 EPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGR 330
PD + +N +++ A RL RM + C+P+ +YN+++ + +
Sbjct: 383 IPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNK 433
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMI 231
A + EMR+ +P S+ V + I ++ G +A E+F+RM+ P ++
Sbjct: 158 ARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLL 217
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
K + A LF+ +S P++ YT LV+A+ R G ++AE++F ++Q AGI
Sbjct: 218 GALSKKRLAGEAQALFDSYKS-VFPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIM 276
Query: 292 PDVYAYNALMEA-YR----------LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
P+VY Y ++++A YR L M GC P+ A++N ++ A+ +AG E
Sbjct: 277 PNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSE 331
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGL--LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
C P TY L++ +C G L+ A V +M G P +N + +L GN +
Sbjct: 345 CDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEA 404
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A +++RM+ C+P+ TY L++ L+ K M L++ +M + +PN+ TY AL+
Sbjct: 405 ARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIE 464
Query: 268 AFAREGLCEEAEEIF-EQLQGAGIEPDVYAYNALMEAYR 305
+F G A E ++ ++P Y+ ++ R
Sbjct: 465 SFCGRGNWRRAHATLREMVEEKSLKPTKPVYDMVLMLLR 503
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y MI+L K +A L +EMR + A++ + R G+ EA E+F +++
Sbjct: 142 YAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRME 201
Query: 287 --GAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
GAG+ PD +L+ EA L PD Y +V A+ RAG
Sbjct: 202 EYGAGV-PDPAVLASLLGALSKKRLAGEAQALFDSYKSVFPPDVVLYTTLVHAWCRAG 258
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 14/192 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ ++ C +G L A +F EM P+A+ YNS I G + G+ +A+ +
Sbjct: 212 PDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRL 268
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M D C P TYT +++ + K + A +LF +M ++K P++ T+T+LV+
Sbjct: 269 LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCG 328
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRAS 320
EG E+A E+ E++ G P +Y YN +++ Y L++ G P+ +
Sbjct: 329 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVT 388
Query: 321 YNIMVDAYGRAG 332
YNI+V RAG
Sbjct: 389 YNILVAGCCRAG 400
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +R +P T +++++ C+ ++ A + EM G+ +A+ Y++ +DGL K
Sbjct: 64 EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 123
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+AV + + M C P+ TY +I + +A + A +M + C P+I TYT
Sbjct: 124 RLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYT 183
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HMGCE 315
AL+ F + E+ ++ G PD+ Y+ +++ R+ M C
Sbjct: 184 ALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 243
Query: 316 PDRASYNIMVDAYGRAG 332
P +YN ++ Y RAG
Sbjct: 244 PTAITYNSLIGGYCRAG 260
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 22/266 (8%)
Query: 107 RLNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
RL D MSC LI Y + +A +++D +C P TY L+
Sbjct: 229 RLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLM 288
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
A+C G L+ A +F++M L P V + S +DGL G + A+E+ + + R C
Sbjct: 289 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 348
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P+ TY +++ Y KA++ A +L + RS PN TY LV R G ++A +
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 408
Query: 282 FEQL--QGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAY 328
+QL +G V Y +++A R + G P A++ +V A
Sbjct: 409 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468
Query: 329 GRAGLHEGKCSYSLVELSVK--HYPA 352
+A H+ + ++ L+E +K H P
Sbjct: 469 CKA--HQPQQAHELLEEMIKYGHTPG 492
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 33/282 (11%)
Query: 82 IWDAFD-----SLPPTHATWDDLI-------NVSVQLRL-----NKKWDPIVLMSCVSIL 124
+ DA D S PT T++ LI ++ +RL + K P V+
Sbjct: 230 LRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV---TYTT 286
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ + A + +++ ++ P T+ L+ C G +E A + E+ + G
Sbjct: 287 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ YN +DG K +KA E+ + P+T TY +++ +A ++ AL
Sbjct: 347 CPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 406
Query: 245 KLFNEMRSH--KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+ +++ S C ++ Y +++A R+G ++A + +E++ G P + ++
Sbjct: 407 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 466
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+A+ L+ M G P + + +V AY RAG+
Sbjct: 467 ALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 508
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 12/183 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +++ C +G L A V+R+M PP + Y + GL K + AV++ Q M
Sbjct: 8 HNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T T+++ + A +L EM N TY+ALV+ + +
Sbjct: 67 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH--------MGCEPDRASYNIMV 325
EA + E + G P V YN+++ + R + H GC PD +Y ++
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186
Query: 326 DAY 328
+
Sbjct: 187 GGF 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 62 LSPTAQQILRFVQREVDSNTIWDAFDSL--------PPTHATWDDLINVSVQLRLNKKWD 113
LSP V + DA + L PPT T++ +++ + +K +
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371
Query: 114 PIV--------LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLK 162
+V + + V+ ++ A ++ YL+ L+S C + YA++L
Sbjct: 372 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 431
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
A C G + A + EM + G P+A + + + L K PQ+A E+ + M + P
Sbjct: 432 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 491
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMR 251
T +++ Y +A A +L +E+R
Sbjct: 492 GPGTCDAVVSAYCRAGMIQKADELASELR 520
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 13/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ IEA ++AE + +++ C P TY +++ +C G + A V R M K
Sbjct: 343 MFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA 402
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ +Y +DG +K ++A+E++QR+ +D PST TY +IN K K A
Sbjct: 403 AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEA 462
Query: 244 LKLFNEM--RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L+L EM R + +P+I TY+ +++ + G+ E A ++ ++ G+ PD + Y +L+
Sbjct: 463 LELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLI 522
Query: 302 E----------AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+ A L+ M G PD +Y +V R+
Sbjct: 523 QTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 563
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
DTY+ ++ Y G +EKA AV EM P + Y +I+ L G ++A ++F+
Sbjct: 304 DTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET 363
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M C+P TY ++I+ + K A + M KPN YT +++ F +
Sbjct: 364 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 423
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDRASY 321
EEA E+++++ GI P YN + +E R + R EP +Y
Sbjct: 424 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 483
Query: 322 NIMVDAYGRAGLHE 335
++++ G+ G+ E
Sbjct: 484 SMIIHGLGKVGMEE 497
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 13/274 (4%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAY 129
L F Q + + +F+ L A DD V+ LR K + ++L
Sbjct: 116 LGFFQSSISEPNV-SSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALC 174
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
++ L K + + + ++C PT TY +L+ C + +E+A VF EM + G P
Sbjct: 175 ARRDLDKAVSY-FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDI 233
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+ Y+S IDGL K G +A ++ M P+ YT ++ K + A+K E
Sbjct: 234 IAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 293
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
MR + +P + TY+ +V + G E+A + E++ PD +Y +EA I R
Sbjct: 294 MRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 353
Query: 310 -----------MHMGCEPDRASYNIMVDAYGRAG 332
+ GC+PD +Y I++D + + G
Sbjct: 354 REEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 387
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y ++ C G +++A +EMR+ L P Y+ + G + G +KA +
Sbjct: 266 PTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAV 325
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C P T +YT+ I + A K+F M CKP++ TY +++ F +
Sbjct: 326 MEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCK 385
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
EG A + + A ++P+ Y Y +M+ + SR+ E P +
Sbjct: 386 EGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVT 445
Query: 321 YNIMVDA 327
YN +++A
Sbjct: 446 YNTVINA 452
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +AE Y E++ P TY+ L+ +CM L++A+ +F M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y++ I G K ++ +E+F+ M + +T TYT +I+ + +A A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+F +M S PNI TY L++ + G +A +FE LQ + +EPD+Y YN ++E
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 303 --------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+ L + + G P+ +YN M+ + R G E
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 23/266 (8%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
NTI D + DD +N+ ++ NK P V I + YG+ S A
Sbjct: 262 NTIIDGL----CKYKHMDDALNLFTEMD-NKGIRPDVFTYSSLISCLCNYGRWS---DAS 313
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
++++ + P T++ L+ A+ G L +AE ++ EM K + P Y+S I+G
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+A +F+ M C P+ TY+ +I + KA + ++LF EM N
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRL 306
TYT L++ F + C+ A+ +F+Q+ G+ P++ YN L++ +
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
+ R M EPD +YNIM++ +AG
Sbjct: 494 LQRSTM--EPDIYTYNIMIEGMCKAG 517
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 113/215 (52%), Gaps = 20/215 (9%)
Query: 134 LHKKA-EFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
LH KA E L +++ C P TY ++ C G ++ A ++ ++M K + V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLF 247
+YN+ IDGL K + A+ +F M +P TY+ +I+ YG+ S A +L
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD---ASRLL 316
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
++M K PN+ T++AL++AF +EG EAE++++++ I+PD++ Y++L+ +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 305 -RLISRMHM-------GCEPDRASYNIMVDAYGRA 331
RL HM C P+ +Y+ ++ + +A
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + + + A+ VF++M G+ P+ + YN +DGL K G KA+ +F+ +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R +P TY +MI KA K +LF + PN+ Y +++ F R+G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EEA+ + ++++ G P+ YN L+ A
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + LL YC S + A A+ +M + G P + + I GL +AV +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M + CQP TY ++N K +AL L +M K + ++ Y +++ +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F ++ GI PDV+ Y++L+ +A RL+S M P+ +
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 321 YNIMVDAYGRAG 332
++ ++DA+ + G
Sbjct: 331 FSALIDAFVKEG 342
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++ + +C L A AV +M K G P V +S ++G AV + +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+P T T+T +I+ L+ KAS+ A+ L ++M C+P++ TY +VN +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASE---AVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G + A + ++++ IE DV YN ++ +A L + M + G PD +Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 322 NIMVDA---YGR 330
+ ++ YGR
Sbjct: 297 SSLISCLCNYGR 308
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + Q A+ + +++ P TY +LL C +G L KA VF +++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN I+G+ K G + E+F + P+ Y MI+ + + A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
L +M+ PN TY L+ A R+G E + E+ ++++ G D
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A +F +M K PS V +N + + K + + + ++M+ TY++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
IN + + S+ +AL + +M +P+I T ++L+N + +A + +Q+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+PD + + L+ EA L+ +M GC+PD +Y +V+ + G
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ SR P+ + LL A E ++ +M+ G+ Y+ +I+ +
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ + +M + +P T + ++N Y + + A+ L ++M KP+ T+T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG 313
L++ EA + +Q+ G +PD+ Y ++ A L+ +M G
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 314 -CEPDRASYNIMVDA 327
E D YN ++D
Sbjct: 253 KIEADVVIYNTIIDG 267
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ + KA + L S P TY ++++ C +G +E +F +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ + YN+ I G + G+ ++A + ++MK D P++ TY +I + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 244 LKLFNEMRS 252
+L EMRS
Sbjct: 593 AELIKEMRS 601
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ +C G E+A+++ ++M++ G P++ YN+ I L+ G+ + + E+
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 212 FQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
+ M+ T L+ N+ G+ KSF+ +
Sbjct: 596 IKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 630
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K++ K E + +++R P TY++LL+ + + L K V+ +M G P V
Sbjct: 189 KNVRKAQEI--FDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVT 246
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y +D L K G ++AV + Q M CQP+T Y+++++ YG + A+ F +M
Sbjct: 247 YGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDME 306
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
P++ Y AL+ AF + E A + + +QG GI P+ +N ++
Sbjct: 307 KDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDD 366
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
EAYR+ M C+PD +Y +M+ + C +E+++K
Sbjct: 367 EAYRVFRSMIKRCKPDSDTYTMMIKMF---------CENDKIEMALK 404
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ +T+ ++++ Y + L++A F M KYG+ + +NS + L K N +KA E
Sbjct: 137 VANVETFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQE 196
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF +M + P +TY++++ +G+A +++++M + C+P+I TY +V+A
Sbjct: 197 IFDKMN-NRFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALC 255
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRA 319
+ G EEA + + + G +P + Y+ L+ Y + R+ G PD
Sbjct: 256 KTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVV 315
Query: 320 SYNIMVDAY 328
YN ++ A+
Sbjct: 316 VYNALITAF 324
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG + A +L++ +P Y L+ A+C E A V +M+ +
Sbjct: 284 ILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGH 343
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P++ +N ++ L+ G +A +F+ M + C +P ++TYT+MI ++ + K MA
Sbjct: 344 GISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKRC-KPDSDTYTMMIKMFCENDKIEMA 402
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
LK++ MR + P++ T++ L+N +G +A + E + GI P
Sbjct: 403 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRP 451
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y++ + L K Q ++ M+++ + ET+ +++ Y +A K A+ FN M
Sbjct: 109 YHTVVTSLAKIRQYQLMWDVVAIMRKEGV-ANVETFGIIMRKYARAQKLDEAVYTFNVME 167
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-RLISRM 310
+ N+ + +L++A + +A+EIF+++ PD Y+ L+E + R S
Sbjct: 168 KYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPSLP 226
Query: 311 HM----------GCEPDRASYNIMVDAYGRAG-LHEGKC 338
M GC+PD +Y IMVDA + G + E C
Sbjct: 227 KMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVC 265
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P DTY +++K +C + +E A V++ MR PS ++ I+GL G +A
Sbjct: 378 RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQA 437
Query: 209 VEIFQRMKRDCCQPSTETY 227
+ + M +P T+
Sbjct: 438 CVLLEDMIEKGIRPPGSTF 456
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 144 ELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD + P TY ++ YC SG L +A +F EM+ GL P + VY + +DG
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC---- 255
+ + ++A+ IF K+ C ST + +IN K K+ + ++ N +
Sbjct: 743 CRLNDVERAITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR------ 309
KPN TY +++ +EG E A+E+F Q+Q A + P V Y +L+ Y + R
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 310 -----MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+ G EPD Y+++++A+ L EG + +LV
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAF----LKEGMTTKALV 896
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 10/223 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y +K +A Y ++D + TY +L+ + ++ AE +FREMR G
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y I+G K GN QKA IF M + P+ Y +++ + ++ + A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L +EM PN TY +++ + + G EA +F++++ G+ PD + Y L++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 303 --------AYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGK 337
A + GC A +N +++ + G E K
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S C P Y L+K + + A V +EM++ G+ P YNS I GL K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN--ICT 261
+A M + +P+ TY I+ Y +AS+ A K EMR PN +CT
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 262 ---------------------------------YTALVNAFAREGLCEEAEEIFEQLQGA 288
YT L+N + ++AEEIF +++G
Sbjct: 562 GLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 289 GIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGK 337
GI PDV++Y L+ + + M G P+ YN+++ + R+G E K
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE-K 680
Query: 338 CSYSLVELSVK 348
L E+SVK
Sbjct: 681 AKELLDEMSVK 691
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + S A+ E+ + +P + L+ YC + +A + +R M G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG 587
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ A Y ++GL K A EIF+ M+ P +Y ++IN + K A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
+F+EM PN+ Y L+ F R G E+A+E+ +++ G+ P+ Y
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 298 ---NALMEAYRLISRMHM-GCEPDRASYNIMVDA 327
L EA+RL M + G PD Y +VD
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
++ + +KA+ + ++ S IP YA L++ YC + + + EM+K + S
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y + + G+ G+ A I + M C+P+ YT +I + + S+ A+++ EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ P+I Y +L+ ++ +EA ++ G++P+ + Y A + Y
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY +++ C G LE A+ +F +M+ L P+ + Y S ++G K G + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-----CKPNICTYTALV 266
F +P Y+++IN + K + AL L ++M + CK +I T AL+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ FA+ G E AE++ E + PD
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y ++ ++ +E+ + + TY ++K C SG L+ A + +EM G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V+Y + I L+ A+ + + MK P Y +I KA + A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EM + KPN TY A ++ + A++ ++++ G+ P+ L+ Y
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 305 RLISRMHMGCEPDRASYNIMVD 326
++ C ++Y MVD
Sbjct: 568 CKKEKVIEAC----SAYRSMVD 585
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 156 TYALLLKAYCMSG-------LLEKAEAVFR--------------EMRKYGLPPSAVVYNS 194
TY +L+ A+C +G +L K E FR M GL P Y+
Sbjct: 223 TYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDV 282
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDGL K + A + M TY+L+I+ K + A L +EM SH
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC 314
Y + ++EG+ E+A+ +F+ + +G+ P AY +L+E Y + G
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 315 E--PDRASYNIMVDAYGRAGLHEGKCS 339
E + NI++ Y + +G CS
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCS 429
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + ++ ++ +PT TY LL Y G + VF E G+ P ++Y+ I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 198 GLLKGGNPQKAVEIFQRM-----KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
LK G KA+ + +M D C+ S T +++ + K + +A K+ M
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943
Query: 253 HKCKPNICTYTALVN 267
+ P+ T L+N
Sbjct: 944 LQYIPDSATVIELIN 958
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Query: 144 ELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
ELLD + P TY ++ YC SG L +A +F EM+ GL P + VY + +DG
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC---- 255
+ + ++A+ IF K+ C ST + +IN K K+ + ++ N +
Sbjct: 743 CRLNDVERAITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR------ 309
KPN TY +++ +EG E A+E+F Q+Q A + P V Y +L+ Y + R
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 310 -----MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+ G EPD Y+++++A+ L EG + +LV
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAF----LKEGMTTKALV 896
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 10/223 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y +K +A Y ++D + TY +L+ + ++ AE +FREMR G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y I+G K GN QKA IF M + P+ Y +++ + ++ + A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L +EM PN TY +++ + + G EA +F++++ G+ PD + Y L++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 303 --------AYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGK 337
A + GC A +N +++ + G E K
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + S A+ E+ + +P + L+ YC G + +A + +R M G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ A Y ++GL K A EIF+ M+ P +Y ++IN + K A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
+F+EM PN+ Y L+ F R G E+A+E+ +++ G+ P+ Y
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 298 ---NALMEAYRLISRMHM-GCEPDRASYNIMVDA 327
L EA+RL M + G PD Y +VD
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ S C P Y L+K + + A V +EM++ G+ P YNS I GL K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN--ICT 261
+A M + +P+ TY I+ Y +AS+ A K EMR PN +CT
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 262 ---------------------------------YTALVNAFAREGLCEEAEEIFEQLQGA 288
YT L+N + ++AEEIF +++G
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 289 GIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHEGK 337
GI PDV++Y L+ + + M G P+ YN+++ + R+G E K
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE-K 680
Query: 338 CSYSLVELSVK 348
L E+SVK
Sbjct: 681 AKELLDEMSVK 691
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C + L+I K + + F +E++++ P TY + Y + A+ +E
Sbjct: 489 CYNSLIIGLSKAKRMDEARSF-LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
MR+ G+ P+ V+ I+ K G +A ++ M +TYT+++N K K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A ++F EMR P++ +Y L+N F++ G ++A IF+++ G+ P+V YN
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ +A L+ M + G P+ +Y ++D Y ++G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
++ + +KA+ + ++ S IP YA L++ YC + + + EM+K + S
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y + + G+ G+ A I + M C+P+ YT +I + + S+ A+++ EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ P+I Y +L+ ++ +EA ++ G++P+ + Y A + Y
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY +++ C G LE A+ +F +M+ L P+ + Y S ++G K G + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-----CKPNICTYTALV 266
F +P Y+++IN + K + AL L ++M + CK +I T AL+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ FA+ G E AE++ E + PD
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y ++ ++ +E+ + + TY ++K C SG L+ A + +EM G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V+Y + I L+ A+ + + MK P Y +I KA + A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EM + KPN TY A ++ + A++ ++++ G+ P+ L+ Y
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 305 RLISRMHMGCEPDRASYNIMVD 326
++ C ++Y MVD
Sbjct: 568 CKKGKVIEAC----SAYRSMVD 585
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 156 TYALLLKAYCMSG-------LLEKAEAVFR--------------EMRKYGLPPSAVVYNS 194
TY +L+ A+C +G +L K E FR M GL P Y+
Sbjct: 223 TYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDV 282
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDGL K + A + M TY+L+I+ K + A L +EM SH
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC 314
Y + ++EG+ E+A+ +F+ + +G+ P AY +L+E Y + G
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 315 E--PDRASYNIMVDAYGRAGLHEGKCS 339
E + NI++ Y + +G CS
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCS 429
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + ++ ++ +PT TY LL Y G + VF E G+ P ++Y+ I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 198 GLLKGGNPQKAVEIFQRM-----KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
LK G KA+ + +M D C+ S T +++ + K + +A K+ M
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943
Query: 253 HKCKPNICTYTALVN 267
+ P+ T L+N
Sbjct: 944 LQYIPDSATVIELIN 958
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 11/224 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++ A+ + +KA + E+ P + +Y L+ YC GLL A + MR
Sbjct: 221 MVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAK 280
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V +NS IDG K G +A ++F MK P+T TY +IN + + S M
Sbjct: 281 GVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMG 340
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+L+ EM + K +I TY AL+ +EG ++A + ++L + P+ ++AL+
Sbjct: 341 RRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISG 400
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
A++L M +GC P+ ++N++V A+ + EG
Sbjct: 401 QCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEG 444
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ A T+L++ +PT ++ L + ++ A A ++EMR+ + P+ N
Sbjct: 163 RNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMV 222
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K G +KAV++F+ M+ P+ +Y +I Y + A+KL N MR+
Sbjct: 223 MRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGV 282
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--- 312
+ N+ T+ +L++ F +EG EA ++F +++ + P+ YN L+ + + M
Sbjct: 283 EANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRR 342
Query: 313 --------GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
G + D +YN ++ + G K +Y + EL
Sbjct: 343 LYEEMSRNGVKADILTYNALILGLCKEG-KTKKAAYMVKEL 382
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C + + L K A F +M+ YG P+ N+Y+ LL A+
Sbjct: 142 CDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIAL 201
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ M+R P+ T +++ + K+ K A+++F EM S PN +Y L+ +
Sbjct: 202 AFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGY 261
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
R+GL A ++ ++ G+E +V +N+L+ EA ++ S M + P+
Sbjct: 262 CRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNT 321
Query: 319 ASYNIMVDAYGRAG 332
+YN +++ + + G
Sbjct: 322 ITYNTLINGHSQMG 335
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ +G+ ++ +A E+ D+ C P TY L Y +G L++ AV M G
Sbjct: 327 MLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKG 386
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ Y + ID K G A+ +F MK C P+ TY ++ + GK S++ +
Sbjct: 387 VMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVI 446
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ EM+ + C PN T+ ++ + EG ++ +++ G EPD +N L+ AY
Sbjct: 447 KVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAY 506
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ M G P +YN +++A R G
Sbjct: 507 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRG 545
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 128/269 (47%), Gaps = 29/269 (10%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSL 134
L PT T++ +++V ++ + WD I+ + +C ++ I A G++ +
Sbjct: 246 LDPTLVTYNVMLDVYG--KMGRSWDRILELLDEMRSKGLELDEFTCSTV--ISACGREGM 301
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A EL + P TY +L+ + +G+ +A ++ +EM PP +V YN
Sbjct: 302 LDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNE 361
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
++ G + + + M P+ TYT +I+ YGKA + AL+LF+ M+
Sbjct: 362 LAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLG 421
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AY 304
C PN+ TY +++ ++ E+ ++ +++ G P+ +N ++
Sbjct: 422 CAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVN 481
Query: 305 RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+++ M + G EPD+ ++N ++ AY R G
Sbjct: 482 KVLREMKNCGFEPDKDTFNTLISAYARCG 510
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 45/333 (13%)
Query: 18 GFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREV 77
GF DK+ +FN + RCGS YG G P ++ T +L + R
Sbjct: 491 GFEPDKD----TFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVT-TYNALLNALARRG 545
Query: 78 DSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
D W A +S+ +Q K + P LL+ Y + K
Sbjct: 546 D----WKAAESV--------------IQDMRTKGFKP---NENSYSLLLHCYSKAGNVKG 584
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGL----LEKAEAVFREMRKYGLPPSAVVYN 193
E E+ D P+ +LL+ ++ L E F +++KYG P VV N
Sbjct: 585 IEKVEKEIYDGHVFPS----WILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVIN 640
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S + + KA E+ + QP+ TY +++LY + + + A ++ +++
Sbjct: 641 SMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNS 700
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
+P++ +Y ++ F R+GL +EA + ++ GI+P + YN + EA
Sbjct: 701 GPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEA 760
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+I M C P +Y I+VD Y +AG +E
Sbjct: 761 NEVIRFMIEHNCRPSELTYKILVDGYCKAGKYE 793
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 19/280 (6%)
Query: 36 SRKRCGSLRGKGWKYGSGFVDGIFPVLSPTA--QQILRFVQREVDSNTIWDAFDSLPPTH 93
+RK L+ G+K G+ + + V + L ++ D+N PP
Sbjct: 305 ARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNC--------PPDS 356
Query: 94 ATWDDLINVSVQLR-LNKKWDPIVLMSCVSIL--------LIEAYGQKSLHKKAEFTYLE 144
T+++L V+ L++ I M+ ++ +I+AYG+ A +
Sbjct: 357 VTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSL 416
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ D C P TY +L E V EM+ G P+ +N+ + + G
Sbjct: 417 MKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGK 476
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++ + MK +P +T+ +I+ Y + + K++ EM P + TY A
Sbjct: 477 HNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNA 536
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L+NA AR G + AE + + ++ G +P+ +Y+ L+ Y
Sbjct: 537 LLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCY 576
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ Y G KAE V + ++ G P V YN+ I G + G Q+A+ +
Sbjct: 669 PNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGV 728
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M QP+ TY ++ Y A ++ M H C+P+ TY LV+ + +
Sbjct: 729 LSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCK 788
Query: 272 EGLCEEAEEIFEQLQGAGIEPD 293
G EEA + +++ I D
Sbjct: 789 AGKYEEAMDFVSKIKELDISFD 810
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 107/287 (37%), Gaps = 81/287 (28%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS- 188
G+KS + E+ + C P T+ +L G V REM+ G P
Sbjct: 437 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDK 496
Query: 189 ----------------------------------AVVYNSYIDGLLKGGNPQKAVEIFQR 214
YN+ ++ L + G+ + A + Q
Sbjct: 497 DTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQD 556
Query: 215 MKRDCCQPSTETYTLMINLYGKASK------------------SFMALKL---------- 246
M+ +P+ +Y+L+++ Y KA S++ L+
Sbjct: 557 MRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRH 616
Query: 247 -------FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
F++++ + KP++ ++++ FAR + +A E+ + G++P+++ YN
Sbjct: 617 LRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNC 676
Query: 300 LMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
LM+ Y L + G EPD SYN ++ + R GL +
Sbjct: 677 LMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQ 723
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 27/156 (17%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ KY L A Y + + + G ++A+++F +MK P+ TY +M+++YGK +
Sbjct: 208 VEKYSLDVRA--YTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGR 265
Query: 240 SF-MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
S+ L+L +EMRS + + T + +++A REG+ +EA + +L+ G +P YN
Sbjct: 266 SWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYN 325
Query: 299 ALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
+ M+ +G+AG++
Sbjct: 326 S------------------------MLQVFGKAGIY 337
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 27/164 (16%)
Query: 192 YNSYIDGLLKGGNPQKAVEIF----------QRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ S + L GN ++A+ +F Q ++ D + LM+ + G+ S+
Sbjct: 143 FPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLD-----NQVVELMVRILGRESQHS 197
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+A KLF+ + K ++ YT +++++AR G + A ++F +++ G++P + YN ++
Sbjct: 198 IASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVML 257
Query: 302 EAY-----------RLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
+ Y L+ M G E D + + ++ A GR G+
Sbjct: 258 DVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGM 301
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 91 PTHATWDDLINVSVQLR---LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
P+ D+++ + L+ + K+WD + + + + EA Q H
Sbjct: 205 PSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG----------- 253
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
C P YA ++ C G E A + M YGL P+ V YN+ + GL ++
Sbjct: 254 --CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEE 311
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ M ++ C T+ ++++ + + ++L +M H C P++ TYT ++N
Sbjct: 312 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 371
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
F +EGL +EA + + + G +P+ +Y ++ +A LIS M GC P
Sbjct: 372 GFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP 431
Query: 317 DRASYNIMVDAYGRAGLHE 335
+ ++N +++ + GL E
Sbjct: 432 NPVTFNTLINFMCKKGLAE 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + A+ + M + G
Sbjct: 369 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 428
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V +N+ I+ + K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 429 CLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 488
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ +A +REG ++ ++F+ +Q A + D YNA++
Sbjct: 489 ELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSL 548
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y I++ GL
Sbjct: 549 CKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGL 588
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E+ C + T+ +L+ +C +GL+++ + +M ++G P + Y +
Sbjct: 310 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 369
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ +A + A +L + M C
Sbjct: 370 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC 429
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 430 LPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 489
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ M A R G
Sbjct: 490 LLNVMINKGITPNTIIYSSMASALSREG 517
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C+P T+ L+ C GL E+A + ++M G P + Y++ IDGL K G
Sbjct: 424 MIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 483
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE--------------- 249
++A+E+ M P+T Y+ M + + ++ +++F+
Sbjct: 484 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 543
Query: 250 --------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M S+ C PN TYT L+ A EGL EA+++ +L
Sbjct: 544 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 22/216 (10%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
T L+ + R C T ++L+A C G A + + G + N +
Sbjct: 128 LTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSA 187
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK----------SFMALKLFN 248
+ + G + VE+ +++ C+P +Y ++ A + + +
Sbjct: 188 ICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALS 247
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------- 301
+M H C P++ Y +++ ++G E A +I ++ G++P+V YN ++
Sbjct: 248 QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAE 307
Query: 302 ---EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
EA L++ M C D ++NI+VD + + GL
Sbjct: 308 RWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++++ C GL+ A V EM G + + + ++ +GG + AV
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q + C + L+++ + ++L ++ S C+P+I +Y A++
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
++ EE+ + ++ + +S+M GC PD Y ++D +
Sbjct: 226 AKRWDDVEELMVE---------------MVRVHEALSQMPEHGCTPDLRMYATIIDGICK 270
Query: 331 AGLHE 335
G HE
Sbjct: 271 DGHHE 275
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ G+ ++A +++ P Y+ + A G +K +F ++
Sbjct: 474 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 533
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-- 242
+ A +YN+ I L K +A++ F M + C P+ TYT++I G AS+ +
Sbjct: 534 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIR--GLASEGLVRE 591
Query: 243 ALKLFNEMRSHK 254
A L +E+ S +
Sbjct: 592 AQDLLSELCSRR 603
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 88 SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
++PP+ +T+++LIN A G K+A ++ D
Sbjct: 215 AIPPSRSTYNNLIN--------------------------ACGSSGNWKEALNVCKKMTD 248
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ P T+ ++L A+ KA + F ++ + P +N I L+K K
Sbjct: 249 NGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDK 308
Query: 208 AVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
AV+IF M K+ C P T+T MI+LY FN M + KPNI +Y AL
Sbjct: 309 AVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNAL 368
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHM 312
+ A+A G+ EA ++F +++ G PDV +Y +L+ AY ++I R ++
Sbjct: 369 LGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNL 428
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
+P+ SYN ++DAYG GL E
Sbjct: 429 --KPNIVSYNALIDAYGSNGLLE 449
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F ++ S C P T+ ++ Y + G +E EA F M GL P+ V YN+ +
Sbjct: 313 FNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAY 372
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G +A+++F +K++ +P +YT ++N YG++ K A ++F ++ + KPNI
Sbjct: 373 AARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNI 432
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+Y AL++A+ GL E+A EI +++ I P+V + L+ A
Sbjct: 433 VSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAA 476
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 48/256 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +A + E+ RC P +TY L+ A+ +G A + +M +
Sbjct: 155 MMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 214
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEI-------------------------------- 211
+PPS YN+ I+ GN ++A+ +
Sbjct: 215 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKA 274
Query: 212 ---FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICTYTALV 266
F+ +K +P T T+ ++I+ K + A+ +FN M+ K C P++ T+T+++
Sbjct: 275 LSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMI 334
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCE 315
+ ++ G E E F + G++P++ +YNAL+ AY ++ + + G
Sbjct: 335 HLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR 394
Query: 316 PDRASYNIMVDAYGRA 331
PD SY +++AYGR+
Sbjct: 395 PDVVSYTSLLNAYGRS 410
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y LL AY G+ +A VF E+++ G P V Y S ++ + PQKA EI
Sbjct: 360 PNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREI 419
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ +KR+ +P+ +Y +I+ YG A+++ EM K PN+ + L+ A R
Sbjct: 420 FKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGR 479
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G + + + + GI+ + AYN+ + +Y
Sbjct: 480 CGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSY 512
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG L + A E+ + P + LL A G K + V G
Sbjct: 438 LIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRG 497
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V YNS I + G KA++++ M++ + + TYT++I+ K SK AL
Sbjct: 498 IKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEAL 557
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFARE----GLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
EM K + Y++++ A++++ G EAE F ++ G PDV Y A+
Sbjct: 558 SFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAM 617
Query: 301 MEAY 304
++AY
Sbjct: 618 LDAY 621
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H F++++ + C T D Y ++++ + ++A +F EM+K P A YN+
Sbjct: 132 HCNLVFSWMKNQKNYCART-DIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNA 190
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I+ + G + A+ I M R PS TY +IN G + AL + +M +
Sbjct: 191 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 250
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------------- 301
P++ T+ ++ AF +A FE ++G I PD +N ++
Sbjct: 251 VGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAV 310
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + + C PD ++ M+ Y G
Sbjct: 311 DIFNSMKEKKSECHPDVVTFTSMIHLYSVCG 341
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 50/257 (19%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + + +A + E+ + P +Y LL AY S +KA +F+ +++
Sbjct: 368 LLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNN 427
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS--------------------- 223
L P+ V YN+ ID G + A+EI + M++D P+
Sbjct: 428 LKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 487
Query: 224 --------------TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
T Y I Y + A+ L+N MR K K + TYT L++
Sbjct: 488 TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGC 547
Query: 270 AREGLCEEAEEIFEQLQGAGI--EPDVY------------AYNALMEAYRLISRMH-MGC 314
+ EA E++ + +VY A ++EA + M +GC
Sbjct: 548 CKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGC 607
Query: 315 EPDRASYNIMVDAYGRA 331
PD +Y M+DAY A
Sbjct: 608 SPDVVTYTAMLDAYNAA 624
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 196 IDGLLKGGNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I L + G+ + +F MK ++ C T+ Y +MI L+ + +++ A LF EM+
Sbjct: 121 IRELTQRGSIEHCNLVFSWMKNQKNYC-ARTDIYNMMIRLHARHNRTDQARGLFFEMQKC 179
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
+CKP+ TY AL+NA R G A I + + A I P YN L+ EA
Sbjct: 180 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 239
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ +M G PD ++NIM+ A+ + SY
Sbjct: 240 LNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSY 277
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG----GNPQKAVEI 211
TY +L+ C +A + EM LP S VY+S I K G +A
Sbjct: 539 TYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAEST 598
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK C P TYT M++ Y A K LF EM + K + AL+ AF +
Sbjct: 599 FNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNK 658
Query: 272 EG 273
G
Sbjct: 659 GG 660
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE T+ + C P TY +L AY + EK A+F EM + + + + +
Sbjct: 594 EAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALM 653
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
KGG P + + + Q M+ S + M++ G A+ + M
Sbjct: 654 RAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPV 713
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ +N+ + G E ++F ++ +G E + Y+ L++
Sbjct: 714 ISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLK 759
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 21/234 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A G KS H + + L+ R P TY L +C +A + R+M + G
Sbjct: 176 LLDALG-KSRHASKAASLVRALERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESG 234
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-----DCCQPSTETYTLMINLYGKASK 239
+ P+ YN + G + G Q A F +MK+ + C+P +YT +I+ G A +
Sbjct: 235 IAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQ 294
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF+EM C P I TY AL+ ++G E+A +F+ + P+V Y
Sbjct: 295 LDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTV 354
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
L+ A +L+ RM + GCEP +YN+++ R EG+ +L
Sbjct: 355 LIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLI----RYSFEEGEMDKAL 404
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P +Y ++ ++G L+KA +F EM K G PP+ YN+ I + K GN +
Sbjct: 272 DENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVE 331
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV +F M R P+ TYT++I K A+KL M++ C+P + TY L+
Sbjct: 332 DAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLI 391
Query: 267 NAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEA 303
EG ++A +FE++ +G P+ YN ++ A
Sbjct: 392 RYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVISA 429
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I G KA + E+ C PT TY L++ C G +E A VF +M +
Sbjct: 285 IIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKD 344
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I GL G +A+++ +RMK + C+P +TY ++I + + AL
Sbjct: 345 YIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKAL 404
Query: 245 KLFNEM-RSHKCKPNICTYTALVNA-FAR---EGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
LF M + +C PN TY +++A F R E + A + E ++ G P + N
Sbjct: 405 HLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVE-RGYLPRRFMLNR 463
Query: 300 LMEAYRL 306
++ L
Sbjct: 464 VLNGLML 470
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+LL C PT TY +L++A + G +++A + EM GL P YN+ I G+ K G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A E+ + ++ +P +Y +++ K KL +M S KC PN+ TY+
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L+ R+G EEA + + ++ G+ PD Y+Y+ L+ A+ R+ +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD +YN ++ + G
Sbjct: 398 GCLPDIVNYNTVLATLCKNG 417
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E+L+ P Y L+ +C ++ A V MR P V YN I L
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G A+++ ++ D CQP+ TYT++I ALKL +EM S KP++ TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM 312
++ +EG+ + A E+ L+ G EPDV +YN L+ E +L+++M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 313 -GCEPDRASYNIMVDAYGRAG 332
C+P+ +Y+I++ R G
Sbjct: 327 EKCDPNVVTYSILITTLCRDG 347
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 16/189 (8%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K + + KA V + K+G P YN+ I+G K A + RM+
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P T TY +MI K +ALK+ N++ S C+P + TYT L+ A EG +EA
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAY 328
++ +++ G++PD++ YN ++ A+ ++ + + G EPD SYNI++
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILL--- 305
Query: 329 GRAGLHEGK 337
RA L++GK
Sbjct: 306 -RALLNQGK 313
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A + ++ E ++ +C P TY++L+ C G +E+A + + M++
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P A Y+ I + G A+E + M D C P Y ++ K K+ A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L++F ++ C PN +Y + +A G A + ++ GI+PD YN+++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 302 --------EAYRLISRMHMGCE--PDRASYNIMVDAYGRA 331
EA+ L+ M CE P +YNI++ + +A
Sbjct: 483 LCREGMVDEAFELLVDMR-SCEFHPSVVTYNIVLLGFCKA 521
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +LL+A G E+ E + +M P+ V Y+ I L + G ++A+ +
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MK P +Y +I + + + +A++ M S C P+I Y ++ +
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRMHMGCEPDRAS 320
G ++A EIF +L G P+ +YN + A + ++ M G +PD +
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 321 YNIMVDAYGRAGL 333
YN M+ R G+
Sbjct: 476 YNSMISCLCREGM 488
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 142 YLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+LE ++ C+P Y +L C +G ++A +F ++ + G P++ YN+ L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G+ +A+ + M + P TY MI+ + A +L +MRS + P++
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
TY ++ F + E+A + E + G G P+ Y L+E
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y + A SG +A + EM G+ P + YNS I L + G +A
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M+ PS TY +++ + KA + A+ + M + C+PN TYT L+
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 270 AREGLCEEAEEIFEQL 285
G EA E+ L
Sbjct: 554 GFAGYRAEAMELANDL 569
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A LE++ + P E TY ++ C G++++A + +MR PS V YN +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
G K + A+ + + M + C+P+ TYT++I G A A++L N++
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + +++VF +RK+GL PS V +N+ ++G ++ G+ K + M
Sbjct: 139 FNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI+ M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGSCKDG 325
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C +++A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M P TY +I YG K + A L NEM KP+ TYT L++
Sbjct: 264 YKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGS 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
++G E A E +++ I D AY AL+ +A +++ M +G +PD
Sbjct: 322 CKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDS 381
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 382 GTYTMIINEFCKKG 395
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 11/237 (4%)
Query: 79 SNTIWDAFD--SLPPTHATWDDLINVSV-QLRLNKKWDPIVLMSCVSI--------LLIE 127
S +++DA L P+ +++ L+N + Q L+K + M + +LI
Sbjct: 155 SQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
++S +A + E+LD +P T+ L+ +C +G ++ A ++++M L P
Sbjct: 215 GLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSP 274
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ YN+ I GL K G+ ++A + M +P TYT +I+ K A +
Sbjct: 275 DLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYR 334
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
M + + YTAL++ +EG +AE++ ++ G++PD Y ++ +
Sbjct: 335 KRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEF 391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM + + YT +I+ + +S A K+ EM S KP+ T
Sbjct: 324 DGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 416
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ +K A+ E+LD P YA L+ + G L++A+ +F+ + +
Sbjct: 458 VLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEK 517
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V YN I G K G A+ +M+R P T++ +I+ Y K
Sbjct: 518 GLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAV 577
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LK+F M CKPN+ TYT+L+N + R+G + AE++F ++ G++P V Y+ L+ +
Sbjct: 578 LKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGS 637
Query: 304 Y-------RLISRMHM----GCEPDRASYNIMVDAY 328
+ + +S + C P+ A+++ +V+ +
Sbjct: 638 FCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGF 673
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y +K + A + +L IPT T+ L+ +C G+ E + + EM+ G
Sbjct: 249 LIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + +YN+ ID K G KA + + M +CC+P TY +IN + + A
Sbjct: 309 LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAE 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL + PN TYT LV+ + ++G +A + ++ +G+E D+ +Y AL+
Sbjct: 369 KLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGL 428
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ M+ G PD YN++++ + G
Sbjct: 429 VVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKG 467
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++K + SG+++ A +MR+ P +++ IDG +K N ++IF M
Sbjct: 526 YNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMV 585
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ C+P+ TYT +IN Y + ++ MA KLF+ MRSH KP++ TY+ L+ +F +E
Sbjct: 586 KQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLG 645
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYN 322
+A FE + P+ A++ L+ + + EP+ N
Sbjct: 646 KAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHEN 691
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ YC G KA EM GL + Y + I GL+ G A+ I
Sbjct: 381 PNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI 440
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM P Y +++N K K MA + EM P+ Y LV+ F R
Sbjct: 441 RDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIR 500
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMGCE-PDRAS 320
G +EA+++F+ + G++P V YN +++ + I +M PD +
Sbjct: 501 HGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFT 560
Query: 321 YNIMVDAY 328
++ ++D Y
Sbjct: 561 FSTIIDGY 568
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
++L++SR C+P Y L+ YC G +E A +F++++ G P+ + S ++G
Sbjct: 228 IKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNG 287
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K G + + MK + + Y +I+ K A EM + C+P+
Sbjct: 288 FCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPD 347
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLI 307
+ TY L+N F G EEAE++ EQ G+ P+ Y L+ Y LI
Sbjct: 348 LVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLI 407
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAG 332
G E D SY ++ AG
Sbjct: 408 EMSTSGLEVDMISYGALIHGLVVAG 432
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++++K C+ G +E + G P+ V YN+ IDG K G + A ++F+++
Sbjct: 210 TTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKL 269
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P+ +T+ ++N + K L EM+ N+ Y +++A + G
Sbjct: 270 KMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFD 329
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIM 324
+A++ +++ EPD+ YN L+ EA +L+ + + G P++ +Y +
Sbjct: 330 IKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPL 389
Query: 325 VDAYGRAGLHEGKCSYSLVELSV 347
V Y + G + Y L+E+S
Sbjct: 390 VHGYCKQGEYTKATDY-LIEMST 411
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 51/245 (20%)
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYID 197
EFT E+ IPT + + +L AY GL++KA V+ + K + PS NS ++
Sbjct: 118 EFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLN 177
Query: 198 GLLKGGNPQKAVEIFQRM-KRD-----C-------------------------------- 219
L+K + A +++ M RD C
Sbjct: 178 LLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGK 237
Query: 220 -CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
C P+ Y +I+ Y K + A KLF +++ P + T+ +LVN F + G+ E
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEA-YRL---------ISRMHMG-CEPDRASYNIMVDA 327
+ + +++ G+ +V YN +++A Y+L + M CEPD +YN +++
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357
Query: 328 YGRAG 332
+ G
Sbjct: 358 FCSRG 362
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 31/227 (13%)
Query: 140 FTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
FTY LLD+ C +P TY+ ++ Y +G L++A +F E
Sbjct: 213 FTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE 272
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ + V YN+ + K G ++A+ + + M+ + TY ++ YGK K
Sbjct: 273 MKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 332
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
++F EM++ + PN+ TY+ L++ +++ GL +EA E+F + + AG++ DV Y+A
Sbjct: 333 YEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSA 392
Query: 300 LMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L++A L G P+ +YN ++DA+GR+G+ E
Sbjct: 393 LIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVE 439
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY------GLPPSAVVYNSYIDGL 199
DS P TY ++ A G+ +A +F EM + G+ YN+ +D +
Sbjct: 163 DSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAV 222
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
KGG A +I M R P+ TY+ +I+ Y KA + AL LFNEM+ +
Sbjct: 223 CKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR 282
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA------YRLISRM--H 311
+Y L++ +A+ G EEA + ++++ +GI+ D YNAL+ Y + R+
Sbjct: 283 VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEE 342
Query: 312 MGCE---PDRASYNIMVDAYGRAGLHE 335
M E P+ +Y+ ++D Y + GL++
Sbjct: 343 MKAERIFPNLLTYSTLIDVYSKGGLYQ 369
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 50/262 (19%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG++ +++ + + E+ R P TY+ L+ Y GL ++A VFRE +K G
Sbjct: 323 LLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 382
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK-------- 236
L V+Y++ ID L K G + AV M ++ +P+ TY +I+ +G+
Sbjct: 383 LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDAT 442
Query: 237 --------------------ASKSFMA-------------LKLFNEMRSHKCKPNICTYT 263
A K+ A L +F++M KPN+ T++
Sbjct: 443 ESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFS 502
Query: 264 ALVNAFAREGLCEEAEEIFEQL-----QGAGIEPDV---YAYNALMEAYRLISRM-HMGC 314
A++NA +R E+A + E+L Q G+ + Y N ++A L + M
Sbjct: 503 AILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYGDNVWVQAQSLFDEVKQMDS 562
Query: 315 EPDRASYNIMVDAYGRAGLHEG 336
A YN + D G G
Sbjct: 563 STASAFYNALTDMLWHFGQRRG 584
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL Y G E+ + VF EM+ + P+ + Y++ ID KGG Q+A+E+F+
Sbjct: 319 TYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREF 378
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ + Y+ +I+ K A+ +EM +PN+ TY ++++AF R G+
Sbjct: 379 KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIV 438
Query: 276 EEAEE 280
E+A E
Sbjct: 439 EDATE 443
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ K TY E+LD R P TY ++ A C + ++KA V M K G
Sbjct: 18 VINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 77
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YNS + G G P++A+ ++M+ D +P TY +++ K + A
Sbjct: 78 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 137
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F+ M KP+I TY L+ +A +G E + + + GI P+ Y ++ L+
Sbjct: 138 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 197
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA + S+M G P+ +Y ++D ++G E Y
Sbjct: 198 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 244
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y+ ++ + G L+K + + EM + P+ V YNS I L K KA+
Sbjct: 8 CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAM 67
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M + P TY +++ + + + A+ +MRS +P++ TY +L++
Sbjct: 68 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 127
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA +IF+ + G++PD+ Y L++ Y + MH G P+
Sbjct: 128 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 187
Query: 319 ASYNIMVDAYGR 330
++I+V AY +
Sbjct: 188 YVFSILVCAYAK 199
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 49/265 (18%)
Query: 77 VDSNTIWDAF---DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKS 133
V +T+ + F L T++T++++ L+K+ P V+ +I A +
Sbjct: 13 VSYSTVINGFFKEGDLDKTYSTYNEM--------LDKRISPNVVTYNS---IIAALCKAQ 61
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
KA ++ S +P TY ++ +C SG ++A ++MR G+ P V YN
Sbjct: 62 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 121
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-------------------------- 227
S +D L K G +A +IF M + +P TY
Sbjct: 122 SLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 181
Query: 228 ---------TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
++++ Y K K A+ +F++MR PN TY +++ + G E+A
Sbjct: 182 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDA 241
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEA 303
FEQ+ G+ PD YN+L+ +
Sbjct: 242 MLYFEQMIDEGLRPDSIVYNSLIHS 266
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY +E+A VF +MR+ GL P+AV Y + ID L K G + A+
Sbjct: 185 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 244
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + +P + Y +I+ K A +LF EM + + +++++ +
Sbjct: 245 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 304
Query: 272 EGLCEEAEEIFEQLQGAGIEPDV 294
EG E+ ++F+ + G++PD+
Sbjct: 305 EGRVIESVKLFDLMVRIGVKPDI 327
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ AY ++ ++A + ++ P TY ++ C SG +E A F +M
Sbjct: 192 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 251
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFM 242
GL P ++VYNS I L +KA E+F M R C ST + +I+ + K +
Sbjct: 252 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL-STIFFNSIIDSHCKEGRVIE 310
Query: 243 ALKLFNEMRSHKCKPNICT 261
++KLF+ M KP+I T
Sbjct: 311 SVKLFDLMVRIGVKPDIIT 329
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 60 PVLSPTAQQILRFVQREVDSNTIWDAFDSLP-PTHATWDDLIN-VSVQLRLNKKWDPIVL 117
P + T IL + RE S W F+ LP P T++ +I+ + + L + +
Sbjct: 160 PPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLAR 219
Query: 118 MSCVSIL--------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
M + LI+ YG+ ++ E E+ C P TY L+ +C G
Sbjct: 220 MKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGR 279
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+E+A + F EM++ G+ + V +++++D K G ++A+++F +M+ +P+ TYT
Sbjct: 280 MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTC 339
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+++ KA + AL L NEM N+ TYT LV+ +EG EAE++F ++ AG
Sbjct: 340 LVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399
Query: 290 IEPDVYAYNALMEAY 304
I + Y L+ +
Sbjct: 400 IRANELLYTTLIHGH 414
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
++A+ + + ++A + ++ P E TY L+ C +G L+ A + EM + G+
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGV 365
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + V Y +DGL K G +A ++F+ M+R + + YT +I+ + S AL
Sbjct: 366 PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALS 425
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
L +EM+ + ++ Y AL+ +EA+ + ++ G++P+ Y +M
Sbjct: 426 LLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACF 485
Query: 302 ------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAG 332
EA L+ + M G P+ +Y +VD +AG
Sbjct: 486 KARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAG 523
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
GLL+ A +R+ +PP+ N + L + + + A +F+++ P+ T+
Sbjct: 142 GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTF 197
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+MI+ K A L M++ C P++ TY +L++ + + G EE E++ +++G
Sbjct: 198 NIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRG 257
Query: 288 AGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
G PDV YNAL+ + RM G + +++ VDA+ + G+
Sbjct: 258 CGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGM 314
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C G + +AE VFR M + G+ + ++Y + I G N ++A+ + M
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM 430
Query: 216 K---------------------------------RDCC--QPSTETYTLMINLYGKASKS 240
K D C +P+ YT +++ KA K
Sbjct: 431 KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKE 490
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ L +M +PNI TY ALV+ + G +EA F ++ G+EP+V AY AL
Sbjct: 491 SEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTAL 550
Query: 301 MEA 303
++
Sbjct: 551 VDG 553
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ + A+C +G++ +A +F +MR G+ P+ V Y +DG K G A+ + M
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TYT++++ K K A +F M + N YT L++
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E A + +++ G+E DV Y AL+ EA L+++M G +P+ Y +
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480
Query: 325 VDAYGRA 331
+DA +A
Sbjct: 481 MDACFKA 487
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ C L++A+++ +M + GL P+ V+Y + +D K +A+ + Q+M
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ TY +++ KA A+ FN+M +PN+ YTALV+ + G +
Sbjct: 502 DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLD 561
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--MGCEPDRASYNIMVDAYGRAGLH 334
+A + +++ G+ D +LM+ + + + + + +D YG
Sbjct: 562 KAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621
Query: 335 EGKCSYSLVE 344
G C+ ++++
Sbjct: 622 WGFCNLNMIQ 631
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++DS P TY L+ C +G +++A + F +M GL P+ Y + +DGL K G
Sbjct: 499 KMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNG 558
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KAV + M T +++ + K A L +M + + ++ YT
Sbjct: 559 RLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYT 618
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
V F + +EA E+ ++ GI PD YN L+ + + M
Sbjct: 619 CFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNM 665
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A A+ ++M G P+ V Y + +DGL K G+ +A+ F +M +P+ + YT ++
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ K + A+ L +EM + T+L++ ++G ++A + ++ +G++
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQ 611
Query: 292 PDVYAY----------NALMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
D+Y Y N + EA ++S M G PD YN +++ + G
Sbjct: 612 LDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLG 663
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ LP V ++ + L G AV R++ P+T T ++ + S
Sbjct: 123 RRSALPS---VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSS 179
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+A +LF ++ + PN+ T+ +++ +EG EA + +++ G PDV YN+L
Sbjct: 180 ELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSL 235
Query: 301 MEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
++ Y +L+ M GC PD +YN +V+ + + G E SY
Sbjct: 236 IDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSY 286
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C +G L+KA + EM G+ VV S +DG LK GN Q A +
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFAL 601
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M Q YT + + + A ++ +EM + P+ Y L+N +
Sbjct: 602 KAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQK 661
Query: 272 EGLCEEAEEIFEQLQ 286
G EEA + +++
Sbjct: 662 LGNMEEAAILQNEME 676
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 36/301 (11%)
Query: 47 GWK-YGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ 105
WK Y S DG+ P + I+ + + W F+ + W
Sbjct: 267 AWKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWG-------- 318
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY 164
+ + ++ CV LL EA Q + KK + S I Y L+ AY
Sbjct: 319 ---KEAFGALIKSFCVEGLLSEALIIQSEMEKKG-------ISSNAI----VYNTLMDAY 364
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C S +E+AE +F EM+ G+ P+AV +N + + P+ + MK +P+
Sbjct: 365 CKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNA 424
Query: 225 ETYTLMINLYGKASK-SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+YT +I+ YG+ K S MA F +M+ KP +YTA+++A++ G E+A +FE
Sbjct: 425 NSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFE 484
Query: 284 QLQGAGIEPDVYAYNALMEAYRLIS-----------RMHMGCEPDRASYNIMVDAYGRAG 332
+ GI+P + Y L++A+R + M + + ++NI+VD + + G
Sbjct: 485 NMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQG 544
Query: 333 L 333
L
Sbjct: 545 L 545
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AYG QK + A +L++ PT +Y ++ AY +SG EKA AVF M +
Sbjct: 430 LISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIRE 489
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS Y + +D + G+ + ++I++ M + + + T+ ++++ + K A
Sbjct: 490 GIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEA 549
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +E +P + TY L+NA+AR GL ++ ++++ + PD Y+ ++ A
Sbjct: 550 RDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALRLRPDSITYSTVIYA 609
Query: 304 Y 304
+
Sbjct: 610 F 610
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 25/183 (13%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
++ + L+K++C+ GLL +A + EM K G+ +A+VYN+ +D K ++A +F
Sbjct: 319 KEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFV 378
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
MK +P+ T+ +++ Y + + + L EM+ KPN +YT L++A+ R+
Sbjct: 379 EMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQK 438
Query: 274 -LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + A + F +++ GI+P ++Y A M+ AY +G
Sbjct: 439 KMSDMAADAFLKMKKVGIKPTSHSYTA------------------------MIHAYSVSG 474
Query: 333 LHE 335
HE
Sbjct: 475 WHE 477
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 47/225 (20%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T Y L + + +K +FR + + VYN+ I GLL G + A +++
Sbjct: 212 TPKVYTTLFPLLGRARMGDKLMVLFRNLPSSKEFRNVRVYNAAISGLLYDGRYKDAWKVY 271
Query: 213 QRMKRDCCQPSTETYTLMI-----------------------------NLYGKASKSF-- 241
+ M+ D P T ++MI +G KSF
Sbjct: 272 ESMETDGVLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALIKSFCV 331
Query: 242 -----MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
AL + +EM N Y L++A+ + EEAE +F +++ GI+P
Sbjct: 332 EGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVT 391
Query: 297 YNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGR 330
+N LM AY L++ M G +P+ SY ++ AYGR
Sbjct: 392 FNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGR 436
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 29/221 (13%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVE 210
P + +L+K +C +G + A V EM++ G+ P+++ Y++ +D L ++AVE
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 211 IFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M ++ P T+ +MIN + +A + A K+ + M+ + C PN+ Y+AL+N F
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDR 318
+ G +EA++ F++++ G++ D Y LM EA +L+ M C D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 319 ASYNI----------------MVDAYGRAGLHEGKCSYSLV 343
+YN+ M+D +G G+H K SY ++
Sbjct: 374 LTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +++ +C +G +E+A+ + M+K G P+ Y++ ++G K G Q+A +
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K+ + T YT ++N + + ++ A+KL EM++ +C+ + TY ++ +
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG EEA ++ +Q G+ + +Y ++ +A + +S M G P A+
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 321 YNIMVDAYGRAGLHE 335
+N +V +G E
Sbjct: 446 WNELVVRLCESGYTE 460
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKA 208
C E + L++ + S L +K +F ++ + PS ++ ++ L+ G +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLS 179
Query: 209 VEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALV 266
++ K + QP+T + +++ + K A + EM RS PN TY+ L+
Sbjct: 180 RKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 267 NAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEAY----------RLISRMHM-GC 314
+ +EA E+FE + GI PD +N ++ + +++ M GC
Sbjct: 240 DCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC 299
Query: 315 EPDRASYNIMVDAYGRAG-LHEGKCSYSLVE 344
P+ +Y+ +++ + + G + E K ++ V+
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 61/147 (41%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ +C +G ++A + EM+ + YN + GL G ++A+++ +
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWG 400
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ + +Y +++N + A+K + M P+ T+ LV G E
Sbjct: 401 SEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTE 460
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G+ P ++ A++E+
Sbjct: 461 IGVRVLIGFLRIGLIPGPKSWGAVVES 487
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y +L+ YC +++A ++F EMR + V+Y+S IDGL K G A E
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE 420
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F + D P+ TY ++I+ + K M ++LF M P + TY L+N +
Sbjct: 421 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 480
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEP-DRA 319
+ EA + +Q + PD YN+L +A+ L MH+G P D A
Sbjct: 481 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 540
Query: 320 SYNIMVDAYGRA 331
+YN+++DA+ +A
Sbjct: 541 TYNVLLDAFCKA 552
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P T+ +L+ A+C G + +A+ +F M K G P V +N+ I G G
Sbjct: 284 EMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHG 343
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +A ++F + P +YT++I Y K + A+ LFNEMR +I Y+
Sbjct: 344 NVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYS 403
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------- 315
+L++ + G A E+F + G P+V YN L++A+ I + MG E
Sbjct: 404 SLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGK 463
Query: 316 ---PDRASYNIMVDAYGRA 331
P +YNI+++ Y ++
Sbjct: 464 GLTPTVLTYNILINGYCKS 482
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T ++K C++G ++KA + G+ V Y + I+GL K G A ++
Sbjct: 152 PNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQL 211
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M+ +P+ Y ++I+ + K + A L+ ++ P+I TYT+L+ F R
Sbjct: 212 LQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCR 271
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
G E +++ ++ I P+VY +N L++A+ ++I M G +PD +
Sbjct: 272 TGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVT 331
Query: 321 YNIMVDAYGRAG 332
+N ++ + G
Sbjct: 332 FNTLISGHCLHG 343
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T ++ + YC G + A +V + K G P+ + + + GL G QKA++
Sbjct: 117 PSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDF 176
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ Y +IN K +S A +L EM KPNI Y ++++F +
Sbjct: 177 HDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCK 236
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+ L +A +++ ++ GI+PD+ Y +L+ + +L+ M + P+ +
Sbjct: 237 DELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYT 296
Query: 321 YNIMVDAYGRAG 332
+N+++DA+ R G
Sbjct: 297 FNVLIDAFCRKG 308
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 17/195 (8%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LLD C Y L+ C G A + +EM + P+ V+YN ID K
Sbjct: 186 LLDEVC------YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDEL 239
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
KA +++ ++ P TYT +I + + + +L EM + PN+ T+
Sbjct: 240 TCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNV 299
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMG 313
L++AF R+G EA+ +F + G +PD+ +N L +EA +L + G
Sbjct: 300 LIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG 359
Query: 314 CEPDRASYNIMVDAY 328
PD SY I++ Y
Sbjct: 360 ILPDVWSYTILIIGY 374
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 75/175 (42%), Gaps = 11/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A +F + PS + +N+ I ++K + A+ + ++M PS T ++
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
IN Y + A + + +PN T T ++ G ++A + + + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 290 IEPDVYAYNAL----------MEAYRLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
+ D Y L ++A++L+ M +P+ YN+++D++ + L
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDEL 239
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 15/235 (6%)
Query: 110 KKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSG 168
K + P V+ + I G+ L K + ELL D+ C PT TY +L++AY + G
Sbjct: 73 KGFSPDVVTHNIMIGTFCGKGKIDLALKV---FEELLKDNNCKPTLITYTILIEAYILEG 129
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+++A + EM GL P YN GL K G +A E + + C+P TY
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+++ K K +E+ S C+PN+ TY+ L+++ R+G EE+ + + ++
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249
Query: 289 GIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
G+ PD Y Y+ L+ A+ ++ M E PD +YN ++ A + G
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNG 304
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 17/190 (8%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K + S ++KA V + K+G P YN+ I G K + A + RMKR
Sbjct: 16 LIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG 74
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNE-MRSHKCKPNICTYTALVNAFAREGLCEEA 278
P T+ +MI + K +ALK+F E ++ + CKP + TYT L+ A+ EG +EA
Sbjct: 75 FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEA 134
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDA 327
++ +++ G+EPD + YN + A+ + ++ GC+PD +YNI++
Sbjct: 135 LKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILL-- 192
Query: 328 YGRAGLHEGK 337
RA L++GK
Sbjct: 193 --RALLNQGK 200
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ A+C G L+ A M G P V YN+ + L K GN AVEI
Sbjct: 253 PDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEI 312
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F ++ C P+ +Y M++ + + AL + ++M S P++ TY +L++ R
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----EAYR-------LISRMHMGCEPDRAS 320
+G+ +EA + + +P++ +Y ++ +A+R L + + GC+P+ +
Sbjct: 373 DGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETT 432
Query: 321 YNIMVDAYGRAG 332
Y ++++ G +G
Sbjct: 433 YTLLIEGIGFSG 444
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F ++ L+SR C P TY +LL+A G ++ E E+ G P+ V Y+ I
Sbjct: 170 FEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISS 229
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L + G +++V + + MK P Y +I + + K MA++ + M P+
Sbjct: 230 LCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPD 289
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------YR---LIS 308
I Y ++ A + G + A EIF +L G P+V +YN ++ A YR +IS
Sbjct: 290 IVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMIS 349
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGL 333
+M G +PD +YN ++ R G+
Sbjct: 350 QMLSKGIDPDVITYNSLISCLCRDGM 375
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ C P TY++L+ + C G +E++ + + M++ GL P A Y+ I + G
Sbjct: 210 EIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG 269
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E M D P Y ++ K A+++F ++ C PN+ +Y
Sbjct: 270 KLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYN 329
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
+++A G A + Q+ GI+PDV YN+L+ EA L++ M G
Sbjct: 330 TMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSG 389
Query: 314 -CEPDRASYNIMV 325
+P+ SY ++
Sbjct: 390 RFQPNIVSYKTVL 402
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y ++ A C +G + A +F ++ + G PP+ YN+ + L G+ +A+
Sbjct: 287 LPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALG 346
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ +M P TY +I+ + A+ L +M S + +PNI +Y ++
Sbjct: 347 MISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLC 406
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ ++A E+ + G +P+ Y L+E
Sbjct: 407 KAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG 439
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y +L A SG +A + +M G+ P + YNS I L + G +A+
Sbjct: 321 CPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAI 380
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M QP+ +Y ++ KA + A+++ M + C+PN TYT L+
Sbjct: 381 GLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
G +A E+ L Y NA+ E
Sbjct: 441 GFSGSRTQAMELANSL---------YIMNAISE 464
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L P TY L+ C G++++A + +M P+ V Y + + GL K
Sbjct: 350 QMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAH 409
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
A+E+ M + CQP+ TYTL+I G + A++L N +
Sbjct: 410 RIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 12/189 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY ++ C G A + R+M + + P+ V+Y++ IDGL K G A
Sbjct: 211 PNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHN 270
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
++ M+ P TY MI+ + + + A +L EM K PN+ TY+AL+NA+
Sbjct: 271 LYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYV 330
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRA 319
+E EAEE+++++ GI P+ YN++++ + RL + HM GC PD
Sbjct: 331 KERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF 390
Query: 320 SYNIMVDAY 328
++N ++D Y
Sbjct: 391 TFNTLIDGY 399
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y+ ++ G A ++ EM++ G+ P YN IDG G +A +
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL 306
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M P+ TY+ +IN Y K K F A +L++EM PN TY ++++ F +
Sbjct: 307 LQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCK 366
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+ + AE +F + G PDV+ +N L++ Y R+ G E D +
Sbjct: 367 QNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTT 426
Query: 321 YNIMVDAYGRAG 332
YN ++ + G
Sbjct: 427 YNTLIHGFCLVG 438
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 125 LIEAY-GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y G K + E + E+ ++ + TY L+ +C+ G L A + ++M
Sbjct: 395 LIDGYCGAKRIDDGTELLH-EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISS 453
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-----------DCCQPSTETYTLMIN 232
G+ P V N+ +DGL G + A+E+F+ M++ + +P +TY ++I+
Sbjct: 454 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
K A +L+ EM PN TY++++N ++ +EA ++F+ + P
Sbjct: 514 GLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 573
Query: 293 DVYAYNALMEAY----RLISRMHMGCE-------PDRASYNIMVDAYGRAGLHEGKCSYS 341
DV +N L+ Y R+ + + CE D +Y ++ + + G G
Sbjct: 574 DVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIF 633
Query: 342 LVELSVKHYP 351
+S YP
Sbjct: 634 QEMISSGVYP 643
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 18/190 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ LL C+ + +A +F +M + P+ V + + ++GL + G +AV +
Sbjct: 145 PDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVAL 200
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR--SHKCKPNICTYTALVNAF 269
RM D QP+ TY +++ K + AL L +M SH KPN+ Y+A+++
Sbjct: 201 LDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSH-IKPNVVIYSAIIDGL 259
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
++G +A ++ ++Q GI PD++ YN ++ EA RL+ M P+
Sbjct: 260 WKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNV 319
Query: 319 ASYNIMVDAY 328
+Y+ +++AY
Sbjct: 320 VTYSALINAY 329
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 104 VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA 163
+Q L +K +P V+ LI AY ++ +AE Y E+L IP TY ++
Sbjct: 307 LQEMLERKINPNVVTYSA---LINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+C L+ AE +F M G P +N+ IDG E+ M
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
T TY +I+ + AL L +M S P+I T L++ G ++A E+F+
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483
Query: 284 QLQGA-----------GIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASY 321
+Q + G+EPDV YN L +EA L M H G P+ +Y
Sbjct: 484 AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543
Query: 322 NIMVDA 327
+ M++
Sbjct: 544 SSMING 549
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + H A Y E+ + P TY ++ +C SG +A+ + +EM +
Sbjct: 255 IIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V Y++ I+ +K +A E++ M P+T TY MI+ + K ++ A
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAE 374
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M + C P++ T+ L++ + ++ E+ ++ G+ D YN L+ +
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF 434
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
L+ ++ G PD + N ++D
Sbjct: 435 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 468
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ G +AE +++EM G+ P+ + Y+S I+GL K +A ++
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P T+ +++ Y KA + L+LF EM + TY L++ F +
Sbjct: 563 FDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRK 622
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G A +IF+++ +G+ PD +++
Sbjct: 623 VGNINGALDIFQEMISSGVYPDTITIRSML 652
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
LE A +F +M + PS + +N + +++ P + ++Q+M+R ++ +
Sbjct: 58 LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I + SK AL F ++ +P++ T++ L++ E EA ++F Q+
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
P+V + LM EA L+ RM G +P++ +Y +VD + G
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +AE Y E+ +P TY+ ++ C L++A +F M
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P V +N+ + G K G +E+F M R TY +I+ + K A
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
L +F EM S P+ T +++ + + A + E LQ
Sbjct: 630 LDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 13/225 (5%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDS--RCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
+ILL +K + E ++ D RC P +Y++++ + G ++K +F E
Sbjct: 165 TILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLE 224
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M G+PP V Y + IDGL K +A +FQ+M + +P+ TY +I+ Y K
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+++ EM + KP+ TY +L+N + G C EA F+ + GI+P V Y
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344
Query: 300 LMEAYRL---ISRMHM--------GCEPDRASYNIMVDAYGRAGL 333
L+ Y +S MH G PD +NI AY + G+
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A F + ++ P TY +L+ Y G L + + M + GL P ++N +
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIF 380
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
K G KA++IF +M++ P+ Y +I+ K + A FN+M +
Sbjct: 381 FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGV 440
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
PNI + +LV E AEE+ ++ GI P+ +N L ME R
Sbjct: 441 TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR 500
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
LI M H+G PD SY ++ Y G
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTG 528
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y +AE + ++ PTE TY LL YC + ++ A +FREM + G
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + GL + +A E++ M + TY +++N K++ A
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 639
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
K+F + S + NI T+T ++ A + G E+A ++F + G+ P+V Y
Sbjct: 640 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 699
Query: 298 ---NALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELS 346
+L E L S M G P+ M++A R LH G S + LS
Sbjct: 700 IEEGSLEEFDSLFSAMEKNGTAPNSQ----MLNALVRRLLHRGDISRAGAYLS 748
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ +C G LE A F + K G + N + GL G +A+++
Sbjct: 88 PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147
Query: 212 -FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTALVN 267
QRM C P T +YT+++ ++ AL+L + M +C PN+ +Y+ ++N
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISR--------MHMGCEP 316
F EG ++ +F ++ GI PDV Y +++ +L R + G +P
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267
Query: 317 DRASYNIMVDAYGRAG 332
+ +YN ++ Y G
Sbjct: 268 NNYTYNCLIHGYLSIG 283
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI Y K + ++L+L+ ++ P + + AY G+++KA +F +MR+
Sbjct: 344 ILIHGYATKGALSEMH-SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 402
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+GL P+ V Y + ID L K G A F +M + P+ + ++ K
Sbjct: 403 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 462
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +L EM PN + L+ G E + + ++ G+ PD ++Y L+
Sbjct: 463 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 522
Query: 303 AYRLISR-----------MHMGCEPDRASYNIMVDAYGRA 331
Y L R + +G P +YN ++ Y A
Sbjct: 523 GYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 562
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 35/204 (17%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+LE++D P TY ++ C + L ++AE VF++M G P+ YN I G L
Sbjct: 222 FLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLS 281
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++ V++ + M +P TY ++N K + A F+ M KP + T
Sbjct: 282 IGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVST 341
Query: 262 YTALVN-----------------------------------AFAREGLCEEAEEIFEQLQ 286
Y L++ A+A+ G+ ++A +IF +++
Sbjct: 342 YGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR 401
Query: 287 GAGIEPDVYAYNALMEAYRLISRM 310
G+ P+V Y AL++A + R+
Sbjct: 402 QHGLSPNVVNYGALIDALCKLGRV 425
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ AY + + KA + ++ P Y L+ A C G ++ AE F +M
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 438
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P+ VV+NS + GL ++A E +++ + + C + TL+ NL +
Sbjct: 439 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC-NVGRVME 497
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+L + M +P+ +YT L++ + G +EAE++F+ + G+ P YN L+
Sbjct: 498 GRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 557
Query: 303 AYRLISR-----------MHMGCEPDRASYNIMV 325
Y SR + G P +YN ++
Sbjct: 558 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ YC++G ++AE VF M GL P+ V YN+ + G A +
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M R P TY +++ + + A +L+ M + K +I TY ++N +
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+EA ++F+ L G++ ++ + ++ A
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 663
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E+LD P + L+ C G + + + M G+ P A Y
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 520
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G G +A ++F M P+ TY +++ Y AS+ A LF EM
Sbjct: 521 ISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 580
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P + TY +++ + EA+E++ + +G + D+Y YN ++ EA++
Sbjct: 581 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFK 640
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ + G + + ++ IM+ A + G E
Sbjct: 641 MFQSLCSKGLQLNIITFTIMIGALLKGGRKE 671
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + AE + ++++ P + L+ C E+AE + EM G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+AV +N+ I L G + + M+ +P +YT +I+ Y ++ A
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F+ M S P TY L++ + ++A +F ++ G+ P V YN ++
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594
Query: 302 -------EAYRL-ISRMHMGCEPDRASYNIMVDA 327
EA L ++ ++ G + D +YNI+++
Sbjct: 595 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 71/193 (36%), Gaps = 49/193 (25%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG---GN 204
+RC+ E A +A S L+ A +F E+ + P S +N + + +
Sbjct: 10 ARCLELERIIAE--RARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSA 67
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ AV F RM R+C S K PN+CTY+
Sbjct: 68 SELAVSHFNRMVREC--------------------------------SDKVAPNLCTYSI 95
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRM-HM 312
L+ F R G E F + G D A N L++ L+ RM +
Sbjct: 96 LIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPEL 155
Query: 313 GCEPDRASYNIMV 325
GC PD SY I++
Sbjct: 156 GCMPDTVSYTILL 168
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K+ H K + + +R + T TY++L+ + G EKA +F+ M + G P +
Sbjct: 194 KTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLA 253
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
YN+ + L KGG +A IF M +P TY++ I+ Y A AL++ ++MR
Sbjct: 254 YNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMR 313
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
+ PN+ TY ++ + EEA + +++ G+ PD ++YNA+
Sbjct: 314 RYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVN 373
Query: 302 EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
A RL+ RM C PDR +YN+++ R G
Sbjct: 374 RAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIG 405
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A + +A+ + ++L R P TY++ + +YC + ++ A V +MR+Y
Sbjct: 257 LLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYN 316
Query: 185 LPPSAVVYNSYIDGLLK-----------------GGNP------------------QKAV 209
+ P+ YN I L K G P +A+
Sbjct: 317 ILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAI 376
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ RM++D C P TY +++ L + + K++ M K P++ TY+ +++ F
Sbjct: 377 RLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGF 436
Query: 270 ARE-GLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
++ G EEA + FE + GI P V L
Sbjct: 437 CKKKGKLEEACKYFEMMIDEGIPPYVTTVEML 468
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 12/229 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +G +KA + +L+ C Y LL+A C G +++A+ +F +M
Sbjct: 221 ILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSK 280
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P A Y+ +I + Q A+ + +M+R P+ TY +I K A
Sbjct: 281 RVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEA 340
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +EM S +P+ +Y A+ A + +++ PD + YN +++
Sbjct: 341 YLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKL 400
Query: 304 YRLISRM--------HMGCE---PDRASYNIMVDAY-GRAGLHEGKCSY 340
I R +MG + P ++Y++M+ + + G E C Y
Sbjct: 401 LIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKY 449
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + +KA + +++ S P TY L C G ++ A + EM G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + YNS ++GL K GN ++AV++ + M+ P T T+T +++ Y K + A
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L EM +P + T+ L+N F G+ E+ E + + GI P+ YN+LM+ Y
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRA 331
+ + M G PD +YNI++ + +A
Sbjct: 336 CIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKA 373
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E+++ +P Y L+ +C G ++ A +F EM K + P + Y + I
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL + G +A ++F +M +P TYT +I+ Y K+ + A L N+M P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ TYTAL + + G + A E+ ++ G G++ ++ YN+L+ +A +L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243
Query: 308 SRMHM-GCEPDRASYNIMVDAYGRAG 332
M + G PD ++ ++DAY + G
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTG 269
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
IV + V LI+ + + + A + E+ R +P Y ++ C G + +A+
Sbjct: 76 IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD 135
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
VF +M G+ P V Y + IDG K G +KA + +M + P+ TYT + +
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A +L +EM + NICTY +LVN + G +A ++ E+++ AG+ PD
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255
Query: 295 YAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ LM+AY L+ M G +P ++N++++ + +G+ E
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ ++ YC+ G L+K + +EM+ GL P+ YNS I L K G A +
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P T YT +I+ + K A KLF+EM + P+ YTA++ R
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G EA+++F ++ G+EPD Y L++ A+ L ++M G P+ +
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 321 YNIMVDAYGRAG 332
Y + D + G
Sbjct: 188 YTALADGLCKLG 199
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G P V Y++ I+G GG QK +++ Q M+ +P+ TY +I L K+ K
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A ++ EM + P+ YT L++ F + G + A ++F++++ I PD AY A
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 300 ----------LMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+MEA ++ ++M G EPD +Y ++D Y ++G E
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEME 167
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + KA E+LD PT T+ +L+ +CMSG+LE E + M + G
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS + N + EI++ M P + TY ++I + KA A
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAW 380
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L EM +Y +++ F ++ EA E+FE+++ G+ D YN ++
Sbjct: 381 FLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVD 438
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 12/195 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ AYC +G + KA + REM GL P+ + +N ++G G + +
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P+T TY ++ Y + +++ M + P+ TY L+ +
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
+EA + +++ G +YN+++ EA L M G D
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEI 432
Query: 321 YNIMVD-AYGRAGLH 334
YN+ VD +YG +
Sbjct: 433 YNLFVDISYGEGNME 447
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 5/202 (2%)
Query: 85 AFDSLPPTHATWDDLINVSVQLR--LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTY 142
F +L + +++ LR L++ P V+ V L+ + + + E
Sbjct: 257 TFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV---LMNGFCMSGMLEDGERLL 313
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+L+ +P TY L+K YC+ + +++ M G+ P + YN I G K
Sbjct: 314 AWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKA 373
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
N ++A + + M + +Y +I + K K A +LF EMR + Y
Sbjct: 374 RNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIY 433
Query: 263 TALVNAFAREGLCEEAEEIFEQ 284
V+ EG E A E+ ++
Sbjct: 434 NLFVDISYGEGNMETALELCDE 455
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ +K A+ +E+L A L+ + G L++A+ +F
Sbjct: 455 VLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAK 514
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V YN+ I G K G A+ QRMK P TY+ +I+ Y K + A
Sbjct: 515 GMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNA 574
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LKLF +M KCKPN+ TYT+L+N F R G AE+ FE+++ +G++P+V Y L+
Sbjct: 575 LKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGC 634
Query: 304 YRLISRMHMGCE-----------PDRASYNIMVDA 327
+ ++ C P+ ++N +++
Sbjct: 635 FCKEGKISKACSFFELMLLNRCIPNDVTFNYLING 669
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y ++ ++A + EL +PT +TY +++ C + + + EM++ G
Sbjct: 246 LVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERG 305
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + VYNS +D +K G + + + + + C+P TY +I+ + K A
Sbjct: 306 VDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAE 365
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
+L PN +YT L++ + ++G C A ++F + G D+ AY AL+
Sbjct: 366 ELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGL 425
Query: 304 -------YRLISRMHM---GCEPDRASYNIMVDAYGRAG 332
L R M G PD YN++++ + G
Sbjct: 426 VAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKG 464
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +Y L+ YC G +A +F M + G P V Y + + GL+ G A+ +
Sbjct: 378 PNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTV 437
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M P Y +++N K + A L EM + LV+ F R
Sbjct: 438 RDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIR 497
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDRAS 320
G +EA+++FE G++P V YNA+++ Y + RM G PD +
Sbjct: 498 HGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFT 557
Query: 321 YNIMVDAY 328
Y+ ++D Y
Sbjct: 558 YSTIIDGY 565
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 155 DTYA--LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
D Y+ ++++ C +E+ + + G P+ V YN+ +DG K G+ ++A +F
Sbjct: 204 DNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLF 263
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ +K P+TETY +MIN K L EM+ N+ Y ++V+A +
Sbjct: 264 KELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKH 323
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASY 321
G E + + G EPD+ YN L+ EA L+ + G P++ SY
Sbjct: 324 GCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSY 383
Query: 322 NIMVDAYGRAGLHEGKC 338
++ Y + +GKC
Sbjct: 384 TPLIHVYCK----QGKC 396
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 125 LIEAY-GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+ Y Q LH + + +++ +C P TY L+ +C +G +AE F EMR
Sbjct: 561 IIDGYVKQNDLHNALKL-FGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSS 619
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN---------LY 234
GL P+ V Y I K G KA F+ M + C P+ T+ +IN +
Sbjct: 620 GLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVS 679
Query: 235 GKASKSF-----MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
KA++S + + F M S + + Y +++ + A ++ +++ G G
Sbjct: 680 NKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKG 739
Query: 290 IEPDVYAYNALM 301
I PD ++ AL+
Sbjct: 740 IFPDPVSFAALV 751
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + + A + D P E TY+ ++ Y L A +F +M K
Sbjct: 526 MIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQK 585
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y S I+G + G+ +A + F+ M+ +P+ TYT++I + K K A
Sbjct: 586 CKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKAC 645
Query: 245 KLFNEMRSHKCKPNICTYTALVNAF-----------AREGLCEEAE---EIFEQLQGAGI 290
F M ++C PN T+ L+N A E L +A + F + G
Sbjct: 646 SFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGW 705
Query: 291 EPDVYAYNALM 301
E V AYN+++
Sbjct: 706 EQRVAAYNSVL 716
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ +P + Y +L+ C G L A+ + EM L A V + +DG ++ G
Sbjct: 440 KMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHG 499
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F+ P Y MI Y K AL M+ P+ TY+
Sbjct: 500 KLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYS 559
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-M 312
+++ + ++ A ++F Q+ +P+V Y +L+ + + M
Sbjct: 560 TIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSS 619
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSY 340
G +P+ +Y I++ + + G CS+
Sbjct: 620 GLKPNVVTYTILIGCFCKEGKISKACSF 647
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFR---EMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
PT + + ++ AY SGL+ +A ++ ++ Y P + N+ ++ L++ + A
Sbjct: 132 PTREALSFVVGAYVDSGLVNRALELYHIAYDIHNY--LPDVIACNALLNALIQQKKVEIA 189
Query: 209 VEIFQRM-KRDCCQPSTETYTLMINLYG--KASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++++ M KRD C + Y++ I + G K K KL N+ C PNI Y L
Sbjct: 190 RKVYEEMVKRDGCW---DNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTL 246
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGC 314
V+ + + G E A +F++L+ G P Y ++ L+ G
Sbjct: 247 VDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGV 306
Query: 315 EPDRASYNIMVDAYGRAG 332
+ + YN +VDA + G
Sbjct: 307 DVNVQVYNSIVDAQIKHG 324
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN-EMRSHKCKPNICTYTALVNAF 269
+ + MK P+ E + ++ Y + AL+L++ H P++ AL+NA
Sbjct: 121 LLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNAL 180
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS-RMHMGCEPDR 318
++ E A +++E++ D Y+ ++ E +LI+ R GC P+
Sbjct: 181 IQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNI 240
Query: 319 ASYNIMVDAYGRAG 332
YN +VD Y + G
Sbjct: 241 VFYNTLVDGYWKRG 254
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG--LLKGGNPQKAV 209
P T+ +L+ +C +++ + VF M K G+ P V YNS +DG L+K N K+
Sbjct: 145 PDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKS- 203
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
IF M + P +Y ++IN + K K A+ LFNEM PN+ TY +L++
Sbjct: 204 -IFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 262
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
++ G A ++ +Q+ G+ P++ YN++++A LI++ G +P
Sbjct: 263 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 322
Query: 319 ASYNIMVDAYGRAG 332
+Y I++D + G
Sbjct: 323 YTYTILIDGLCKGG 336
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ C G A + + + + +AV+YN+ I G+ K + A +++ M
Sbjct: 44 SYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM 103
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TY+ +I+ + K A+ LFN++ KP+ T+ LV+ F ++
Sbjct: 104 VSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKM 163
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
+E + +F + GI PDV YN+L++ YRL+ ++ G PD SYNI+
Sbjct: 164 KEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNIL 223
Query: 325 VDAY 328
++ +
Sbjct: 224 INGF 227
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+K C+ G + +A ++ G V Y + I GL K G + A+++
Sbjct: 5 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
QR+ Q + Y +I YG + A L++EM S PN+ TY+AL++ F
Sbjct: 65 LQRVDGKLVQLNAVMYNTVI--YGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 122
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---------RLISRMHM--GCEPDR 318
G ++A ++F ++ I+PD Y +N L++ + + + M M G PD
Sbjct: 123 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDV 182
Query: 319 ASYNIMVDAY 328
+YN +VD Y
Sbjct: 183 VTYNSLVDGY 192
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E++ P TY+ L+ + + G L+ A +F ++ + P +N +DG K
Sbjct: 100 YSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK 159
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++ +F M + P TY +++ Y + A +FN M P+I +
Sbjct: 160 DRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRS 219
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y L+N F + ++A +F ++ I P+V YN+L++ A +L+ +MH
Sbjct: 220 YNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMH 279
Query: 312 -MGCEPDRASYNIMVDA 327
G P+ +YN ++DA
Sbjct: 280 DRGVPPNILTYNSIIDA 296
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ + + K+ + + ++ IP TY L+ Y + + A+++F M +
Sbjct: 152 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQG 211
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN I+G K KA+ +F M P+ TY +I+ K+ + A
Sbjct: 212 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 271
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+L ++M PNI TY ++++A + ++A + + + GI+P +Y Y L++
Sbjct: 272 LQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 331
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 137 KAEFTYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A L+ +D + + Y ++ C + A ++ EM G+ P+ V Y++
Sbjct: 59 RAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 118
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G G + A+++F ++ + +P T+ ++++ + K K +F M
Sbjct: 119 ISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 178
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P++ TY +LV+ + A+ IF + G+ PD+ +YN L+ +A
Sbjct: 179 IPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 238
Query: 306 LISRMHMGCE---PDRASYNIMVDAYGRAGLHEGKCSYSL 342
L + MH C+ P+ +YN ++D ++ G+ SY+L
Sbjct: 239 LFNEMH--CKNIIPNVVTYNSLIDGLSKS----GRISYAL 272
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ +C ++KA +F EM + P+ V YNS IDGL K G A+++
Sbjct: 215 PDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQL 274
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M P+ TY +I+ K + A+ L + + +P++ TYT L++ +
Sbjct: 275 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 334
Query: 272 EGLCEEAEEIFEQL 285
G ++A IFE L
Sbjct: 335 GGRLKDARNIFEDL 348
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + KA + E+ IP TY L+ SG + A + +M
Sbjct: 222 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 281
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+PP+ + YNS ID L K KA+ + + K QPS TYT++I+ K + A
Sbjct: 282 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341
Query: 244 LKLFNEM 250
+F ++
Sbjct: 342 RNIFEDL 348
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ +G+ ++ +A E+ D+ C P TY L+ AY +G ++ AV M G
Sbjct: 349 MLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKG 408
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ Y + I+ K G+ KA+E+F +MK C P+ TY ++ L GK S+S +
Sbjct: 409 VMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMI 468
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ +M+ + C P+ T+ ++ +G + ++ +++ G EPD +N L+ AY
Sbjct: 469 KILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAY 528
Query: 305 RL------ISRMH-----MGCEPDRASYNIMVDAYGRAG 332
+++M+ G P +YN +++A R G
Sbjct: 529 GRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRG 567
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 29/269 (10%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLM--------------SCVSILLIEAYGQKSL 134
L PT T++ +++V ++ + W I+ + +C ++ I A G++ +
Sbjct: 268 LDPTLVTYNVMLDVYG--KMGRAWSMILELLDEMRSKGLEFDEFTCTTV--ISACGREGI 323
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A + +L + P TY +L+ + +G+ +A + +EM P A+ YN
Sbjct: 324 LDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNE 383
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ ++ G + + M P+ TYT +IN YGKA + AL++F +M+
Sbjct: 384 LVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELG 443
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA------YRLIS 308
C PN+CTY ++ + E+ +I ++ G PD +N ++ + +S
Sbjct: 444 CVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVS 503
Query: 309 RM-----HMGCEPDRASYNIMVDAYGRAG 332
++ + G EPD+ ++N ++ AYGR G
Sbjct: 504 QVLREMKNCGFEPDKETFNTLISAYGRCG 532
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 85/147 (57%), Gaps = 12/147 (8%)
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEMRSHKCKPNI 259
+ G ++A+EIF++MK P+ TY +M+++YGK +++ M L+L +EMRS + +
Sbjct: 249 RTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDE 308
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
T T +++A REG+ +EA F+ L+ G +P YN+++ EA ++
Sbjct: 309 FTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKE 368
Query: 310 MH-MGCEPDRASYNIMVDAYGRAGLHE 335
M CEPD +YN +V AY RAG H+
Sbjct: 369 MEDNNCEPDAITYNELVAAYVRAGFHD 395
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY-------------- 164
+C ++L AY + +K+A + ++ ++ PT TY ++L Y
Sbjct: 239 ACTTVL--HAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELL 296
Query: 165 --------------CMS--------GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
C + G+L++A F +++ G P YNS + K
Sbjct: 297 DEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKA 356
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G +A+ I + M+ + C+P TY ++ Y +A + + M S PN TY
Sbjct: 357 GVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITY 416
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM 312
T ++NA+ + G ++A E+F Q++ G P+V YN ++ + +++ M +
Sbjct: 417 TTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKL 476
Query: 313 -GCEPDRASYNIMVDAYGRAG 332
GC PDR ++N M+ G G
Sbjct: 477 NGCPPDRITWNTMLAVCGEKG 497
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 135/333 (40%), Gaps = 45/333 (13%)
Query: 18 GFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREV 77
GF DK +FN + RCGS YG G P +
Sbjct: 513 GFEPDK----ETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCI--------------- 553
Query: 78 DSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
T ++A + W +V + +R K + P LL+ Y + +
Sbjct: 554 ---TTYNALLNALARRGNWKAAESVVLDMR-KKGFKP---NETSYSLLLHCYSKAGNVRG 606
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGL----LEKAEAVFREMRKYGLPPSAVVYN 193
E +E+ D P+ +LL+ ++ L+ E F +++ G VV N
Sbjct: 607 LEKVEMEIYDGHVFPS----WMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVIN 662
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S + ++ +KA E+ + QP+ TY +I+LY + + A ++ ++++
Sbjct: 663 SMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNS 722
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
P++ +Y ++ F ++GL +EA I ++ G++P +N M EA
Sbjct: 723 GISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEA 782
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+I M GC P+ +Y I++D Y +A H+
Sbjct: 783 DEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHK 815
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 19/280 (6%)
Query: 36 SRKRCGSLRGKGWKYGSGFVDGIFPVLSPTA--QQILRFVQREVDSNTIWDAFDSLPPTH 93
+R+ L+ G+K G+ + + V + L ++ D+N DA
Sbjct: 327 ARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAI------- 379
Query: 94 ATWDDLINVSVQLRLNKKWDPIV-LMSCVSIL--------LIEAYGQKSLHKKAEFTYLE 144
T+++L+ V+ + + ++ M+ ++ +I AYG+ KA + +
Sbjct: 380 -TYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQ 438
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ + C+P TY +L E + +M+ G PP + +N+ + + G
Sbjct: 439 MKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGK 498
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ ++ + MK +P ET+ +I+ YG+ K++ EM + P I TY A
Sbjct: 499 QKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNA 558
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L+NA AR G + AE + ++ G +P+ +Y+ L+ Y
Sbjct: 559 LLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCY 598
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 122/284 (42%), Gaps = 52/284 (18%)
Query: 97 DDLINVSVQLRLNK-KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
+D+I + ++LN D I + +++ G+K K E+ + P ++
Sbjct: 465 EDMIKILCDMKLNGCPPDRITWNTMLAVC-----GEKGKQKFVSQVLREMKNCGFEPDKE 519
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ L+ AY G ++ EM G P YN+ ++ L + GN + A + M
Sbjct: 520 TFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDM 579
Query: 216 KRDCCQPSTETYTLMINLYGKASK------------------SFMALKL----------- 246
++ +P+ +Y+L+++ Y KA S+M L+
Sbjct: 580 RKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQL 639
Query: 247 ------FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F++++++ K ++ ++++ F R E+A E+ + + +G++P++ YN+L
Sbjct: 640 KGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSL 699
Query: 301 MEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGL 333
++ Y + + G PD SYN ++ + + GL
Sbjct: 700 IDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGL 743
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K D +V+ S +S+ + +K+ H+ + ++ L P TY L+ Y G
Sbjct: 655 KLDMVVINSMLSMFVRNQKLEKA-HEMLDVIHVSGLQ----PNLVTYNSLIDLYARVGDC 709
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
KAE + ++++ G+ P V YN+ I G K G Q+A+ I M + QP T+
Sbjct: 710 WKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTF 769
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
++ Y A ++ M H C PN TY +++ + + +EA + +++ I
Sbjct: 770 MSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDI 829
Query: 291 EPDVYAYNALMEAYR 305
D + L R
Sbjct: 830 SFDDQSLKKLASCIR 844
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 194 SYIDGLLKG----GNPQKAVEIFQ----RMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
S I GLLKG GN ++A +F+ + + ++ M+ + G+ S+ +A K
Sbjct: 164 SDITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASK 223
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
LF+ + + ++ T +++A+AR G + A EIFE+++ G++P + YN +++ Y
Sbjct: 224 LFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYG 283
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
L+ M G E D + ++ A GR G+
Sbjct: 284 KMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGI 323
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ ++ GL++KA +F EM P + YNS I+ L K G+ +A +
Sbjct: 215 PDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHML 274
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY+++I +GK++K MA LF+EM + C PNI TY L++ R
Sbjct: 275 FKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLER 334
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
G EA +++E L+ G+ PD Y+ L RL SR
Sbjct: 335 HGKTREAHKLYETLKQQGLAPDSITYSIL---ERLESR 369
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 92 THATWDDLINVSVQL-RLNKKWDPIV--LMSCVSILLIEAYGQKSLHKKAEFTYLELLDS 148
T++ D++ QL RLN+ D L V L++A + +A + + S
Sbjct: 82 TYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVKALCKSGHASEAHSVFCRMWSS 141
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
D + +L+A C + +A + M + G+ +YN L K
Sbjct: 142 HEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFM 201
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ +MK + P TY +MI+ +G+ A +LF EM CKP++ TY +++N
Sbjct: 202 SSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINC 261
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
+ G +EA +F+ +Q G +PDV+ Y+ L+E + +++ M GC P+
Sbjct: 262 LGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPN 321
Query: 318 RASYNIMVDAYGRAG 332
+YNI++D R G
Sbjct: 322 IVTYNILLDCLERHG 336
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 45/259 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL----------------------- 161
+IEA G+ + KA F ++++S C P + TY+++L
Sbjct: 51 VIEALGKNKMVDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHL 110
Query: 162 ---------KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
KA C SG +A +VF M + S ++ L +A+++
Sbjct: 111 NRSVYSYLVKALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLL 170
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASK-SFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M Y ++ + GK + SFM+ L+++M+++ P++ TY ++++F R
Sbjct: 171 HMMPEKGITTDVGMYNIIFSALGKLKQVSFMS-SLYDKMKANGVAPDVFTYNIMISSFGR 229
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
GL ++A E+FE++ + +PDV YN+++ EA+ L M G +PD +
Sbjct: 230 VGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFT 289
Query: 321 YNIMVDAYGRAGLHEGKCS 339
Y+I+++ +G++ + CS
Sbjct: 290 YSILIECFGKSNKVDMACS 308
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I ++G+ L KA + E+ DS C P TY ++ +G L++A +F++M++
Sbjct: 222 IMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEK 281
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ I+ K A +F M C P+ TY ++++ + K+ A
Sbjct: 282 GYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKTREA 341
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
KL+ ++ P+ TY+ L
Sbjct: 342 HKLYETLKQQGLAPDSITYSIL 363
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ C P TY +L++ +G K + EM G + + YN+ I+ L K K
Sbjct: 4 NNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDK 63
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ + +M CQP+ TY++M+++ + ++ + H N Y+ LV
Sbjct: 64 AIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGH---LNRSVYSYLVK 120
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----GCEP 316
A + G EA +F ++ + + D A+ +++EA I +HM G
Sbjct: 121 ALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITT 180
Query: 317 DRASYNIMVDAYGR 330
D YNI+ A G+
Sbjct: 181 DVGMYNIIFSALGK 194
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK++ C P TYT++I + GKA K+ + EM S C N+ Y ++ A + +
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEP--------DRASYNIMVD 326
++A + ++ + +P+ + Y+ +++ ++H E +R+ Y+ +V
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVK 120
Query: 327 AYGRAG 332
A ++G
Sbjct: 121 ALCKSG 126
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 61/116 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I G+ +A + ++ + P TY++L++ + S ++ A ++F EM G
Sbjct: 258 MINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQG 317
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P+ V YN +D L + G ++A ++++ +K+ P + TY+++ L ++ ++
Sbjct: 318 CVPNIVTYNILLDCLERHGKTREAHKLYETLKQQGLAPDSITYSILERLESRSQRT 373
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 10/161 (6%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ P A Y I K G K V + M C + Y +I GK
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY-- 297
A+ + ++M C+PN TY+ +++ A G EI + G + VY+Y
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGH-LNRSVYSYLV 119
Query: 298 NAL------MEAYRLISRMHMGCEP-DRASYNIMVDAYGRA 331
AL EA+ + RM E DR ++ M++A A
Sbjct: 120 KALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNA 160
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY ++ A C + ++KA V M K G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YNS + G G P++A+ ++M+ D +P TY+L+++ K + A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI PD Y ++ L+ AY
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G P+ +Y ++ ++G E Y
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ + G +KA + + EM G+ P V YNS I L K KA+E+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P TY +++ Y + + A+ +MRS +P++ TY+ L++ +
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDRAS 320
G C EA +IF+ + G++P++ Y L++ Y + MH G PD
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 321 YNIMVDAYGRAG 332
++I++ AY G
Sbjct: 374 FSILICAYANQG 385
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY + +A + ++ P TY ++ C SG +E A F +M
Sbjct: 376 ILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +VYNS I GL ++A E I + + R C +T + +I+ + K +
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIE 494
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF M KPN+ TY L+N + G +EA ++ + G++P+ Y+ L+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
Y ISRM G PD +YNI++ GL + + + + EL V+
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ-----GLFQTRRTAAAKELYVR 606
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ A + +++D P Y L+ C E+AE + EM G+ + + +NS
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G ++ ++F+ M R +P+ TY +IN Y A K A+KL + M S
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
KPN TY+ L+N + + E+A +F++++ +G+ PD+ YN +++ A
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 306 LISRM-HMGCEPDRASYNIMV 325
L R+ G + + ++YNI++
Sbjct: 603 LYVRITESGTQIELSTYNIIL 623
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 107/211 (50%), Gaps = 11/211 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE LE+LD + ++ ++C G + ++E +F M + G+ P+ + YN+
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G G +A+++ M +P+T TY+ +IN Y K S+ AL LF EM S
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+I TY ++ + A+E++ ++ +G + ++ YN ++ +A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ + M + + ++NIM+DA + G ++
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY G +++A VF +MR+ GL P+AV Y + I L K G + A+
Sbjct: 369 PDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P Y +I+ +K A +L EM N + +++++ +
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++FE + G++P+V YN L+ Y L +M +G +P+ +
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 321 YNIMVDAY 328
Y+ +++ Y
Sbjct: 549 YSTLINGY 556
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSYIDGLLKGGNPQ 206
CIP +Y +LLK C ++A + M R G PP V Y + I+G K G+
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA + M P TY +I KA A+++ N M + P+ TY +++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCE 315
+ + G +EA ++++ G+EPDV Y+ L MEA ++ M G +
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 316 PDRASYNIMVDAYGRAG 332
P+ +Y ++ Y G
Sbjct: 334 PEITTYGTLLQGYATKG 350
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+LL+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P ++++I Y K A+ +F++MR PN TY A++ +
Sbjct: 359 LDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G E+A FEQ+ G+ P YN+L+
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 29/302 (9%)
Query: 67 QQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWDPIVLMSCVS 122
+ IL + R + NTI+ F+S+ +H +I + +R+ K + I +
Sbjct: 462 ELILEMLDRGICLNTIF--FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT--- 516
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI Y +A ++ P TY+ L+ YC +E A +F+EM
Sbjct: 517 --LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P + YN + GL + A E++ R+ Q TY ++++ K +
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL++F + K T+ +++A + G +EA+++F G+ P+ + Y + E
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSV---K 348
+S GC D N +V R L G+ + + LS+ K
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV----RELLQRGEITRAGTYLSMIDEK 750
Query: 349 HY 350
H+
Sbjct: 751 HF 752
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + A + +LL S P+ Y L+ CM+ + A +F +M +
Sbjct: 15 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 74
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PPS V YN ID K G ++A ++ ++M D P TY +++ K+S+ A
Sbjct: 75 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 134
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L LFNEM C PN ++ ++ ++ ++A ++F +++ I PD ++Y L+
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMV 325
EAY+L RM G P +YN+++
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + +A + +LDS P+ TY +++ C++ L++A +F+ MR
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS +N ID K G +A + +RM D P TY+ +I+ ++ A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M +CKP + T L++ + G +EA E+ + + +G PDV YN L+
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
+ L+S M G P+ +Y +V +A
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ +C PT T L+ C +G +++A V M G P V YN+ + G + G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A E+ M P+ TYT +++ KA++ A +F +M+S C PN+ TYT
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL+ F G + ++F ++ AGI PD Y L
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 146 LDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++++ IP + +Y +L+ +G L +A +F+ M G+ PSAV YN I G+
Sbjct: 176 MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A+E+F+ M+ C+PS T+ ++I+ + K K A +L M P++ TY+
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ ++A + E + +P V N L+ EA ++ M G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 314 CEPDRASYNIMVDAYGRAGLHE 335
PD +YN +V + RAG E
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTE 377
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A+ ++ +A + D +P TY+ L+ C ++ A + +M K
Sbjct: 260 ILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ V N+ I GL K G ++A E+ M P TY +++ + +A ++ A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L ++M + PN+ TYTALV+ + EA +F Q++ +G P+++ Y AL+
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ +L M G PD Y + ++G
Sbjct: 440 FCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ T+ +L+ A+C G L++A + + M G P V Y++ I GL A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M + C+P+ T +I+ KA + A ++ + M S P++ TY LV+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
R G E A E+ + G+ P+V Y AL+ EA + ++M GC P+
Sbjct: 371 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 430
Query: 319 ASYNIMVDAYGRAGLHEG 336
+Y ++ + AG +G
Sbjct: 431 FTYTALILGFCSAGQVDG 448
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+A ++ + ++A ++++ +P TY ++ C S +E+A +F EM +
Sbjct: 85 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ +N+ I GL + +A ++F M+ P + +Y ++I+ KA K A
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
KLF M P+ TY +++ +EA E+F+ ++ G P + +N L+
Sbjct: 205 YKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMV 325
EA+RL+ RM G PD +Y+ ++
Sbjct: 265 HCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ +G L A +F+++ G+ PS V Y S I GL + A E+
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M R C PS TY +MI+ K A L +M P++ TY +++ +
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
EEA +F +++ G P+ ++N ++ S++ C+ PD S
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187
Query: 321 YNIMVDAYGRAG 332
Y I++D +AG
Sbjct: 188 YGILIDGLAKAG 199
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + + P + Y IDGL K G A +FQ++ PST YT +I+ A+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +LF +M C P+ TY +++A + G+ EEA ++ +++ G PDV YN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 300 LM----------EAYRLISRMH-MGCEPDRASYNIMV 325
+M EA L + M +GC P+R S+N ++
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 157
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + K+A ++ S P TY L+ +C +G E+A + +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + + GL K +A +F +MK C P+ TYT +I + A + L
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF----EQLQGAGIEPDVY--AYN 298
KLF EM P+ Y L + G A EI E L+ +VY A +
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510
Query: 299 ALMEAYRL 306
L+EA ++
Sbjct: 511 GLLEAGKM 518
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M P+ +Y L++ A+ G +A +F++L +G+ P AY +L+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 302 --EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+A L + M+ GC P +YN+M+DA + G+ E C + H P
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP 113
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 13/240 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Q K A + ++ C P Y +LL C SG LE+A +F EM+ +
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS 215
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ +D + K ++ ++F+ M+ P+ T++ +I+ + + AL
Sbjct: 216 CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 275
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F M CKPN TYT L++ R +A E+FE++ A I PD AYN+L+
Sbjct: 276 EVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 335
Query: 302 -------EAYRLISRMH--MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYPA 352
EA +L M G +P ++N ++D + + G G+ + + E+ K A
Sbjct: 336 CKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG-KLGRANELVAEMGTKGLAA 394
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 100/191 (52%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ Y+ L++A + ++ A ++F EM + G P +++ I GL + G + A E
Sbjct: 113 PSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASER 172
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + CQP+ Y ++++ + + A LF EM+SH C P++ TY L++A +
Sbjct: 173 FKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK 232
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI-SRMHMGCEPDRAS 320
EE ++FE ++ AG P+V ++ L+ +A + S + GC+P++ +
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292
Query: 321 YNIMVDAYGRA 331
Y ++ RA
Sbjct: 293 YTTLISGLCRA 303
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + C P + +++ + S +EKA V++ M + G P V Y+ I GL K G
Sbjct: 35 EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIG 94
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++++I M PS + Y+ ++ KA + A LF+EM P+ +
Sbjct: 95 KLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFY 154
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-M 312
L+ + G ++A E F+Q+ G +P+V YN L+ +A L + M
Sbjct: 155 ELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSH 214
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKC 338
C PD +YN ++DA +A E C
Sbjct: 215 SCSPDVVTYNTLLDAVCKARRVEEGC 240
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ + + + +KA Y +++S P +Y +L+ G L+++ + EM G
Sbjct: 51 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRG 110
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS Y+S + L K A +F M R P + +I +A K A
Sbjct: 111 QTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDAS 170
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F +M H C+PN+ Y L++ G E+A +F +++ PDV YN L++A
Sbjct: 171 ERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAV 230
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
R+ GC+ P+ +++ ++ R G
Sbjct: 231 CKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG 269
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 143 LELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLL 200
E + CIP + Y L+ YC G +++AE ++REM GL P+ V +N+ IDG
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G +A E+ M + TY ++I +A+K AL+++ +MR K +
Sbjct: 373 KLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
+ + V + G ++A +FE + +G P+ + L E+ + R+
Sbjct: 433 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 483
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
MR N+ TY++++ + +E EE+ ++ E++ AG PDV+A+N +M+ + +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 310 M--------HM---GCEPDRASYNIMVDAYGRAG 332
M HM G +PD SY+I++ + G
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIG 94
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
MR + + Y+S I L+K P+++ ++ + M C P + ++ + +++
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +++ M KP+ +Y L++ A+ G +E+ +I ++ G P + AY++
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 300 LMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
L+ A R+ D AS + D R G H
Sbjct: 121 LVRALAKARRV------DHASS--LFDEMIRGGHH 147
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 27/216 (12%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + +P TY+ ++ C + +E A +F+EM+ G+ P Y ID K G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A M RD C+P+ TYT +I+ Y KA K +A +LF M + C PN+ TYT
Sbjct: 539 IIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYT 598
Query: 264 ALVNAFAREGLCEEAEEIFEQLQG----------------AGIEPDVYAYNALM------ 301
AL++ + + G E+A +I+ +++G +P+V Y AL+
Sbjct: 599 ALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKA 658
Query: 302 ----EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A L+ M + GCEP+ Y+ ++D + +A
Sbjct: 659 HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + + K+A E++ C PT TY L+ AY + + A +F M
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC----------------QPSTETY 227
G P+ + Y + IDG K GN +KA +I+ RM+ D +P+ TY
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A L M C+PN Y AL++ F + +EA+E+F ++
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P+VY Y++L+ E
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AY+L+ M GC+P+ +Y M+D +G+AG
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ +C + L++A+ VF +M ++G P+ Y+S ID L K +
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 735
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT MI+ K +K+ A KL M CKPN+ TYTA+++ F
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 795
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDR- 318
+ G ++ E+F ++ G P+ Y L+ EAY L+ M P
Sbjct: 796 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855
Query: 319 ASYNIMVDAYGR 330
+SY +++ Y R
Sbjct: 856 SSYCKVIEGYKR 867
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 112 WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLE 171
+D ++ C + L EA Q+ HK E Y P TY+ L+ L+
Sbjct: 683 YDALIDGFCKAAKLDEA--QEVFHKMVEHGY--------NPNVYTYSSLIDRLFKDKRLD 732
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
V +M + P+ V+Y IDGL K +A ++ M+ C+P+ TYT MI
Sbjct: 733 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ +GKA K L+LF EM S C PN TYT L+N G +EA + E+++
Sbjct: 793 DGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWP 852
Query: 292 PDVYAYNALMEAYR--------LISRMHM-GCEPDRASYNIMVDAYGRAG 332
V +Y ++E Y+ L+ + G P Y +++D + +AG
Sbjct: 853 KHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAG 902
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + ++ A + M G P+ +VY++ IDG K +A E+
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M P+ TY+ +I+ K + + LK+ ++M + C PNI YT +++ ++
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+EA ++ ++ G +P+V Y A+++ + L M GC P+ +
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y ++++ G H + L E+ ++P
Sbjct: 823 YTVLINHCCATG-HLDEAYALLEEMKQTYWP 852
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLL------EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
C P Y +L+ + C G L E AE + EM G + V S+ L G
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+KA ++ M + P T TY+ +I AS+ A LF EM+ P++ TYT
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L++ F++ G+ ++A +++ G EP V Y L+ AY ++ +
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKC 338
GC P+ +Y ++D Y ++G E C
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKAC 614
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + + + + C G EKA V EM G P Y+ I
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + A +F+ MK P TYT++I+ + KA A +EM C+P
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
+ TYT L++A+ + A E+FE + G P+V Y AL++ Y + C+
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 615
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 14/204 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY L++ + + L+ A+ V REM + GL + L K G ++A+ +
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL 298
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ K D P+T Y MI+ +AS A+ N MRS C PN+ TY L+
Sbjct: 299 IE--KEDFV-PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRAS 320
+ + I + G P +N+L+ AY+L+ +M C+P
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVE 344
YNI++ + G G ++ L E
Sbjct: 416 YNILIGSICSGGELPGPVTFELAE 439
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 81/235 (34%), Gaps = 52/235 (22%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y ++ C + E+A MR P+ Y + G L +
Sbjct: 305 VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKR 364
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I M + C PS + +++ Y K+ A KL +M +CKP Y L+ +
Sbjct: 365 ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424
Query: 271 REG------------------------------------LC-----EEAEEIFEQLQGAG 289
G LC E+A ++ ++ G G
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484
Query: 290 IEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
PD Y+ ++ A+ L M G PD +Y I++D + +AG+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ +G+ K + E+ C P TY +L+ C +G L++A A+ EM++
Sbjct: 791 MIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY 850
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y I+G + ++ + + ++++ P Y ++I+ + KA + +AL
Sbjct: 851 WPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908
Query: 245 KLFNEM----RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+L E+ S K N+ YT+L+ +F+ A E+F + G+ PD+ + L
Sbjct: 909 ELHKEVISASMSMAAKKNL--YTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHL 966
Query: 301 M 301
+
Sbjct: 967 L 967
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
PT + L+ + G L+ A+AV +M YG+ P YNS I G K G A+E
Sbjct: 345 PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALE 404
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + M+ C+P+ +YT++++ + K K A L NEM + KPN + L++AF
Sbjct: 405 VLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFC 464
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRMHMGCEPDRA 319
+E EA EIF ++ G +PDVY +N+L+ + L + G +
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 524
Query: 320 SYNIMVDAYGRAG 332
+YN +++A+ R G
Sbjct: 525 TYNTLINAFLRRG 537
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
TH DD V + + P V C LI Y +K L A ++ + C
Sbjct: 359 THGRLDDAKAVLSDMVTSYGIVPDV---CTYNSLIYGYWKKGLVGLALEVLRDMRNKGCK 415
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ +C G +++A + EM GL P+ V +N I K +AVEI
Sbjct: 416 PNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 475
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M R C+P T+ +I+ + + AL L +M S N TY L+NAF R
Sbjct: 476 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G +EA ++ ++ G D YN+L+ +A L +M G P S
Sbjct: 536 RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595
Query: 321 YNIMVDAYGRAGLHE 335
NI+++ R+G+ E
Sbjct: 596 CNILINGLCRSGMVE 610
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A + +++ + TY L+ A+ G +++A + EM G + YNS
Sbjct: 505 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSL 564
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I GL + G KA +F++M RD PS+ + ++IN ++ A++ EM
Sbjct: 565 IKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGS 624
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
P+I T+ +L+N R G E+ +F +LQ GI PD YN LM
Sbjct: 625 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 43/252 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E + HK A + ++L + PT T+ +++KA C ++ A +V R+M K+
Sbjct: 181 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKH 240
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P++V+Y + I L K +A+++ + M C P ET+ +I K + A
Sbjct: 241 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 300
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF--------------------- 282
K+ N M P+ TY L+N + G + A+++F
Sbjct: 301 AKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTH 360
Query: 283 -----------EQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
+ + GI PDV YN+L+ Y L + GC+P+ S
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420
Query: 321 YNIMVDAYGRAG 332
Y I+VD + + G
Sbjct: 421 YTILVDGFCKLG 432
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 11/225 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ +A + E+ C P T+ L+ C ++ A + R+M G
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V YN+ I+ L+ G ++A ++ M TY +I +A + A
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKAR 578
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
LF +M P+ + L+N R G+ EEA E +++ G PD+ +N+L+
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 638
Query: 303 --AYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGKC 338
A R+ + M G PD +YN ++ + G C
Sbjct: 639 CRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC 683
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 8/236 (3%)
Query: 105 QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS-RCIPTEDTYALLLKA 163
+L + K + IV + I ++ Y + + LE+ + C PT +Y ++L+
Sbjct: 126 RLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 185
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+ A VF +M +PP+ + + L A+ + + M + C P+
Sbjct: 186 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPN 245
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+ Y +I+ K ++ AL+L EM C P+ T+ ++ + EA ++
Sbjct: 246 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 305
Query: 284 QLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------PDRASYNIMVDAYGRAG 332
++ G PD Y LM I R+ + P +N ++ + G
Sbjct: 306 RMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHG 361
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C +G +E +FR+++ G+PP V YN+ + L KGG A +
Sbjct: 626 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLL 685
Query: 212 FQRMKRDCCQPSTETYTLMI 231
D P+ T+++++
Sbjct: 686 LDEGIEDGFVPNDRTWSILL 705
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+LE+ C P TY L+ C G +++A+ +F EM + P+ V Y S I+GL
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
N +A+ + MK +P+ TY+ +++ K +S A++LF M + C+PN+ T
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM--------- 312
YT L+ +E +EA E+ +++ G++PD Y ++ + IS+
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 313 --GCEPDRASYNIMV 325
G P+R ++NI V
Sbjct: 360 LGGITPNRLTWNIHV 374
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 29/290 (10%)
Query: 65 TAQQILRFVQREVDSNTIWDAFDSLPPTHA---TWDDLINVSVQLRL---NK---KWDPI 115
T Q+++ ++ E D FDS +A D + LRL NK D I
Sbjct: 15 TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74
Query: 116 VLM---SCV---SILLIEAYGQKSLHKKAEF--TYLELLDSRCIPTEDTYALLLKAYCMS 167
V M +CV ILL G +H+ + + ++ D C P++ Y +L
Sbjct: 75 VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEE 134
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG-GNPQKAVEIFQRMKRDCCQPSTET 226
L A ++ MR+ GLPP+ N I L + G ++IF M + C P + T
Sbjct: 135 NQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYT 194
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +I+ + + A KLF EM C P + TYT+L+N +EA E+++
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 287 GAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRASYNIMV 325
GIEP+V+ Y++LM+ R + M + GC P+ +Y ++
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + E+++ C PT TY L+ C S +++A EM+ G+ P+ Y+S +
Sbjct: 210 EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM 269
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K G +A+E+F+ M C+P+ TYT +I K K A++L + M K
Sbjct: 270 DGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEP 316
P+ Y +++ F EA +++ GI P+ +N ++ + R P
Sbjct: 330 PDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP 389
Query: 317 DRA 319
RA
Sbjct: 390 SRA 392
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 200 LKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L N KA E + RMK + C S + + YG+ + F +L++F++M+ C P+
Sbjct: 61 LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLI 307
Y ++ E A + ++ ++ G+ P V + N L++A ++
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAG 332
M GC+PD +Y ++ R G
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFG 206
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 27/216 (12%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + +P TY+ ++ C + +E A +F+EM+ G+ P Y ID K G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A M RD C+P+ TYT +I+ Y KA K +A +LF M + C PN+ TYT
Sbjct: 539 IIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYT 598
Query: 264 ALVNAFAREGLCEEAEEIFEQLQG----------------AGIEPDVYAYNALM------ 301
AL++ + + G E+A +I+ +++G +P+V Y AL+
Sbjct: 599 ALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKA 658
Query: 302 ----EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A L+ M + GCEP+ Y+ ++D + +A
Sbjct: 659 HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + + K+A E++ C PT TY L+ AY + + A +F M
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC----------------QPSTETY 227
G P+ + Y + IDG K GN +KA +I+ RM+ D +P+ TY
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ KA K A L M C+PN Y AL++ F + +EA+E+F ++
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708
Query: 288 AGIEPDVYAYNALM---------------------------------------------E 302
G P+VY Y++L+ E
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AY+L+ M GC+P+ +Y M+D +G+AG
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ +C + L++A+ VF +M + G P+ Y+S ID L K +
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVL 735
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ +M + C P+ YT MI+ K +K+ A KL M CKPN+ TYTA+++ F
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 795
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDR- 318
+ G ++ E+F ++ G P+ Y L+ EAY L+ M P
Sbjct: 796 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855
Query: 319 ASYNIMVDAYGR 330
+SY +++ Y R
Sbjct: 856 SSYCKVIEGYKR 867
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + + +A+ + ++++ P TY+ L+ L+ V +M +
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V+Y IDGL K +A ++ M+ C+P+ TYT MI+ +GKA K L
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF EM S C PN TYT L+N G +EA + E+++ V +Y ++E Y
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY 865
Query: 305 R--------LISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ L+ + G P Y +++D + +AG
Sbjct: 866 KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAG 902
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C + ++ A + M G P+ +VY++ IDG K +A E+
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M P+ TY+ +I+ K + + LK+ ++M + C PNI YT +++ ++
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+EA ++ ++ G +P+V Y A+++ + L M GC P+ +
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y ++++ G H + L E+ ++P
Sbjct: 823 YTVLINHCCATG-HLDEAYALLEEMKQTYWP 852
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLL------EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
C P Y +L+ + C G L E AE + EM G + V S+ L G
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+KA ++ M + P T TY+ +I AS+ A LF EM+ P++ TYT
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM----------- 312
L++ F++ G+ ++A +++ G EP V Y L+ AY ++ +
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKC 338
GC P+ +Y ++D Y ++G E C
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKAC 614
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + + + + C G EKA V EM G P Y+ I
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + A +F+ MK P TYT++I+ + KA A +EM C+P
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
+ TYT L++A+ + A E+FE + G P+V Y AL++ Y + C+
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 615
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 14/204 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY L++ + + L+ A+ V REM + GL + L K G ++A+ +
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL 298
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ K D P+T Y MI+ +AS A+ N MRS C PN+ TY L+
Sbjct: 299 IE--KEDFV-PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRAS 320
+ + I + G P +N+L+ AY+L+ +M C+P
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVE 344
YNI++ + G G ++ L E
Sbjct: 416 YNILIGSICSGGELPGPVTFELAE 439
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 81/235 (34%), Gaps = 52/235 (22%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y ++ C + E+A MR P+ Y + G L +
Sbjct: 305 VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKR 364
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I M + C PS + +++ Y K+ A KL +M +CKP Y L+ +
Sbjct: 365 ILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424
Query: 271 REG------------------------------------LC-----EEAEEIFEQLQGAG 289
G LC E+A ++ ++ G G
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484
Query: 290 IEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
PD Y+ ++ A+ L M G PD +Y I++D + +AG+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ +G+ K + E+ C P TY +L+ C +G L++A A+ EM++
Sbjct: 791 MIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY 850
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y I+G + ++ + + ++++ P+ Y ++I+ + KA + +AL
Sbjct: 851 WPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVAL 908
Query: 245 KLFNEM----RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+L E+ S K N+ YT+L+ +F+ + A E+F + G+ PD+ + L
Sbjct: 909 ELHKEVISASMSMTAKKNL--YTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHL 966
Query: 301 M 301
+
Sbjct: 967 L 967
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A+ + AE +LD P T+ ++ C +G +E A VF EM + G
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG 250
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V YN+ + G K G +A+ +F M + P T+T +I++ KA A+
Sbjct: 251 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAV 310
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +MR + N T+TAL++ F ++G ++A ++ I+P V YNAL+ Y
Sbjct: 311 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGY 370
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAY 328
++ RM G +PD +Y+ ++ AY
Sbjct: 371 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + +A + E+ +P T+ L+ C +G LE A + R+MR+ G
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG 320
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + V + + IDG K G A+ + M++ +PS Y +IN Y + A
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAR 380
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +EM + KP++ TY+ +++A+ + A E+ +Q+ G+ PD Y++L+
Sbjct: 381 ELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 440
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A+ L M +G +PD +Y ++D + + G
Sbjct: 441 CEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 479
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L P TY +L++A C G ++A ++ R+MR G P+ V YN+ + + G
Sbjct: 141 MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 200
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A + M +P+ T+ M+N KA K A K+F+EM P+ +Y
Sbjct: 201 VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNT 260
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
LV + + G EA +F ++ GI PDV + +L+ A L+ +M G
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG 320
Query: 314 CEPDRASYNIMVDAYGRAG 332
+ + ++ ++D + + G
Sbjct: 321 LQMNEVTFTALIDGFCKKG 339
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A + R P+ Y L+ YCM G +++A + EM G
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ I K + A E+ Q+M P TY+ +I + + + A
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
LF M +P+ TYT+L++ +EG E A + +++ AG+ PDV Y+ L
Sbjct: 451 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510
Query: 301 ------MEAYRLISRMH 311
MEA +L+ +++
Sbjct: 511 SKSARAMEAQQLLFKLY 527
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L A F M G+ P+ YN I L G+ ++A+ I + M+ C P+ TY
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 190
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
++ + +A + A +L M KPN+ T+ ++VN + G E+A ++F+++ G
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG 250
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ PD +YN L+ EA + + M G PD ++ ++ +AG
Sbjct: 251 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAG 304
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L+ +P TY+ L++ C L A +F+ M K GL P Y S IDG K G
Sbjct: 420 QMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 479
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA----LKLFNE---------- 249
N ++A+ + +M + P TY+++IN K++++ A KL++E
Sbjct: 480 NVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYD 539
Query: 250 MRSHKC-KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
H C K + + AL+ F +GL EA+++++ + D Y+ L+ +
Sbjct: 540 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGH 595
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 75/201 (37%), Gaps = 50/201 (24%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ +C G +E+A ++ +M K G+ P V Y+ I+GL K +A ++
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522
Query: 212 FQRMKRD--------------CCQPST--------------------------------- 224
++ + CC+ +
Sbjct: 523 LFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 582
Query: 225 ---ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
Y+++I+ + +A AL +M PN + +L+ G+ EA+++
Sbjct: 583 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQV 642
Query: 282 FEQLQGAGIEPDVYAYNALME 302
+QL D A AL++
Sbjct: 643 IQQLLNCCSLADAEASKALID 663
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 109 NKKWDPIVLMSCV------SIL-LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
N K+D LM C S+L L++ + K L +A+ Y +LD Y++L+
Sbjct: 535 NTKYD--ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI 592
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C +G + KA + ++M + G P++ S I GL + G +A ++ Q++ C
Sbjct: 593 HGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSL 652
Query: 222 PSTETYTLMINL 233
E +I+L
Sbjct: 653 ADAEASKALIDL 664
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P++ Y A++ A + L A F+ + G+ P+VY YN L+ EA +
Sbjct: 114 PSVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAGLHEG 336
+ M GC P+ +YN +V A+ RAG +G
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 203
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK----YGL--PPSAV 190
KA + + C P TY L+K C +G + A + +EM YG+ P +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y+ ID L K +A ++F+ MK P+ +YT +I+ + K A +LFNEM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+ +PN+ T+ L++ +EG EA+++ E + GI P++ YN+L+E + L+ +
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363
Query: 311 H-----------MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+ GCEPD Y ++++ Y C S VE ++K Y
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGY---------CKTSKVEEAMKLY 405
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y++++ A C ++A +F EM+ G+ P+ + Y S I G GG ++A +
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRL 299
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M QP+ T+ ++I++ K K A L M PN+ TY +L+ F
Sbjct: 300 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRAS 320
G A E+F + G EPDV Y L+ Y S+ + +G PD +
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419
Query: 321 YNIMVDAYGRAG 332
Y ++ + G
Sbjct: 420 YGALLTGLFQGG 431
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 30/267 (11%)
Query: 101 NVSVQLRLNKK-----------WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR 149
N+S+ L+L+++ + P+V+ + +I+A + +A + E+
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSI---IIDALCKDRREDEARDLFEEMKVQG 272
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
PT +Y L+ +C G E+A+ +F EM G+ P+ V +N ID L K G +A
Sbjct: 273 MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 332
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ + M + P+ TY +I + A +LF M S C+P++ YT L+N +
Sbjct: 333 DLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGY 392
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
+ EEA +++ + G PDV Y AL+ +A +L M + G D
Sbjct: 393 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 452
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVEL 345
Y I ++ GL + C + +EL
Sbjct: 453 YIYGIFLN-----GLCKNGCLFEAMEL 474
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + S ++A Y +L P TY LL G + A+ +F M+ Y
Sbjct: 387 VLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVY 446
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+P +Y +++GL K G +A+E+F ++K + E + +I+ KA K A
Sbjct: 447 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 506
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF ++ + +P++ TY +++ F R G +A +F++++ G PD Y L+
Sbjct: 507 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 566
Query: 304 Y-------RLISRMHMGCEPD 317
+ +++ +HM + D
Sbjct: 567 FFESKKLEKVVELLHMMVQRD 587
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +LL C + + AV + + G P V Y + I GL KA +F RM
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC------KPNICTYTALVNAF 269
++ C P+ TY ++ + +ALKL EM + KP + +Y+ +++A
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
++ +EA ++FE+++ G+ P V +Y +L+ EA RL + M + G +P+
Sbjct: 253 CKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNV 312
Query: 319 ASYNIMVDAYGRAG 332
++N+++D + G
Sbjct: 313 VTFNVLIDVLCKEG 326
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R +P TY L++ +C+ G L A +F M G P + Y I+G K
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 394
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A++++ M + +P +TY ++ + K A KLF M+ + ++
Sbjct: 395 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 454
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
Y +N + G EA E+F +L+ I+ D+ +N L++ A+ L ++
Sbjct: 455 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 514
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
+PD +YNIM+ + R G
Sbjct: 515 QEELQPDVVTYNIMIHEFCRGG 536
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + L C +G L +A +F +++ Y + +N IDGL K G + A E+F+++
Sbjct: 455 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 514
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
++ QP TY +MI+ + + + A LF +M + C P+ TY L+ F E
Sbjct: 515 QEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLE 574
Query: 277 EAEEIFEQLQGAGIEPDV 294
+ E+ + + DV
Sbjct: 575 KVVELLHMMVQRDVSLDV 592
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 13/145 (8%)
Query: 201 KGGN--PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K GN +A + F M P ++T +++ K L+N+MR P+
Sbjct: 71 KTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPD 130
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
CT L+N E + + G PD+ Y L+ +A L +
Sbjct: 131 CCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFT 190
Query: 309 RMH-MGCEPDRASYNIMVDAYGRAG 332
RM +GC P+ +Y ++ R G
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTG 215
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY ++ A C + ++KA V M K G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YNS + G G P++A+ ++M+ D +P TY+L+++ K + A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI PD Y ++ L+ AY
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G P+ +Y ++ ++G E Y
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ + G +KA + + EM G+ P V YNS I L K KA+E+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P TY +++ Y + + A+ +MRS +P++ TY+ L++ +
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDRAS 320
G C EA +IF+ + G++P++ Y L++ Y + MH G PD
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 321 YNIMVDAYGRAG 332
++I++ AY + G
Sbjct: 374 FSILICAYAKQG 385
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 18/237 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG +E A F +M
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +VYNS I GL ++A E I + + R C +T + +I+ + K +
Sbjct: 436 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIE 494
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF M KPN+ TY L+N + G +EA ++ + G++P+ Y+ L+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
Y ISRM G PD +YNI++ GL + + + + EL V+
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ-----GLFQTRRTAAAKELYVR 606
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ A + +++D P Y L+ C E+AE + EM G+ + + +NS
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G ++ ++F+ M R +P+ TY +IN Y A K A+KL + M S
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
KPN TY+ L+N + + E+A +F++++ +G+ PD+ YN +++ A
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 306 LISRM-HMGCEPDRASYNIMV 325
L R+ G + + ++YNI++
Sbjct: 603 LYVRITESGTQIELSTYNIIL 623
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY G +++A VF +MR+ GL P+AV Y + I L K G + A+
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P Y +I+ +K A +L EM N + +++++ +
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++FE + G++P+V YN L+ Y L +M +G +P+ +
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 321 YNIMVDAY 328
Y+ +++ Y
Sbjct: 549 YSTLINGY 556
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 107/211 (50%), Gaps = 11/211 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE LE+LD + ++ ++C G + ++E +F M + G+ P+ + YN+
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G G +A+++ M +P+T TY+ +IN Y K S+ AL LF EM S
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+I TY ++ + A+E++ ++ +G + ++ YN ++ +A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ + M + + ++NIM+DA + G ++
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSYIDGLLKGGNPQ 206
CIP +Y +LLK C ++A + M R G PP V Y + I+G K G+
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA + M P TY +I KA A+++ N M + P+ TY +++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCE 315
+ + G +EA ++++ G+EPDV Y+ L MEA ++ M G +
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 316 PDRASYNIMVDAYGRAG 332
P+ +Y ++ Y G
Sbjct: 334 PEITTYGTLLQGYATKG 350
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+LL+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P ++++I Y K K A+ +F++MR PN TY A++ +
Sbjct: 359 LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G E+A FEQ+ G+ P YN+L+
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 29/302 (9%)
Query: 67 QQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWDPIVLMSCVS 122
+ IL + R + NTI+ F+S+ +H +I + +R+ K + I +
Sbjct: 462 ELILEMLDRGICLNTIF--FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT--- 516
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI Y +A ++ P TY+ L+ YC +E A +F+EM
Sbjct: 517 --LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P + YN + GL + A E++ R+ Q TY ++++ K +
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL++F + K T+ +++A + G +EA+++F G+ P+ + Y + E
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSV---K 348
+S GC D N +V R L G+ + + LS+ K
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV----RELLQRGEITRAGTYLSMIDEK 750
Query: 349 HY 350
H+
Sbjct: 751 HF 752
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++LD P TY ++ A + ++KA V M K G P+ + +NS + G G
Sbjct: 228 QMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSG 287
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
P A+ +F+RM RD +P TY ++ K +S A K+F+ M KPN TY
Sbjct: 288 KPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYG 347
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRM-HM 312
L++ +A EG + + + + GI+PD Y +N L+ Y L S+M
Sbjct: 348 TLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQ 407
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y I++DA G
Sbjct: 408 GLNPDTVTYGIVMDALCMVG 427
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE +E++ P + LL C G++ +A+ +F M + + + YN+ I
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLI 525
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG G +A ++ + M D +P+ TY MIN Y K + A LF +M S
Sbjct: 526 DGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN 585
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P I TY+ ++ + A+E++ + +GI+ D+ YN ++ +A R+
Sbjct: 586 PGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRI 645
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+++ + ++NIM+DA + G H+
Sbjct: 646 FQNLYLIDFHLENRTFNIMIDALLKGGRHD 675
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM-----RKYGLPPSAVVYNSYIDGLLKGGN 204
C P +Y +LLK C ++A + M + G PP V YN+ I+GLL+ G
Sbjct: 158 CTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGR 217
Query: 205 P-QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +F +M P TY +I+ KA A + M + PN T+
Sbjct: 218 QLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHN 277
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HM 312
+L++ + G +A +F+++ G+EPDV+ YN L MEA ++ M
Sbjct: 278 SLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ A+Y ++ Y G
Sbjct: 338 GHKPNSATYGTLLHGYATEG 357
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 87/186 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A + KA + ++ + +P T+ LL YC SG A VF+ M + G
Sbjct: 244 IISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDG 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ + L K G +A +IF M + +P++ TY +++ Y
Sbjct: 304 VEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMH 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L + M + +P+ + L+ + + G ++A +F +++ G+ PD Y +M+A
Sbjct: 364 HLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423
Query: 305 RLISRM 310
++ ++
Sbjct: 424 CMVGKV 429
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ Y G ++ A +F +MR+ GL P V Y +D L G A+
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F R+ + P + +I+ K A +L EM PN + L+N +
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
EG+ A+ IF+ + ++ DV YN L++ Y +L+ M + G +P+ +
Sbjct: 496 EGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVT 555
Query: 321 YNIMVDAYGRAG 332
YN M++ Y + G
Sbjct: 556 YNTMINGYCKNG 567
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
L+ P + L+ C +KAE + EM G+ P+ + +N+ ++ L K G
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A IF M R Q TY +I+ Y K A KL M KPN TY
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHM 312
++N + + G E+A +F Q+ G+ P + Y+ +++ R +
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKS 617
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCS 339
G + D +YNI++ GL + C+
Sbjct: 618 GIKFDIGTYNIIL-----LGLCQNNCT 639
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY ++ YC +G +E A ++FR+M G+ P V Y++ + GL + A E+
Sbjct: 551 PNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKEL 610
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + + TY +++ + + + AL++F + T+ +++A +
Sbjct: 611 YLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLK 670
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G +EA+++F L G+ P+V Y +M++
Sbjct: 671 GGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 702
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 102/189 (53%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y +L++ C +G +A + ++ + + V+YN+ + L K +++++
Sbjct: 467 DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 526
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P +Y ++I+ +G+A + A+K+F E+ + CKP+I ++ +L+N + G
Sbjct: 527 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 586
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F++++ G+ PDV Y+ L+E + ++ M GC P+ +YNI
Sbjct: 587 IDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 646
Query: 324 MVDAYGRAG 332
++D R+G
Sbjct: 647 LLDCLERSG 655
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 152 PTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P+ D +Y +L+ ++ +G +E+A +F E+ P + +NS I+ L K G+ +A
Sbjct: 532 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAH 591
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M+ + P TY+ +I +GK K MA +LF+EM + C PNI TY L++
Sbjct: 592 MRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCL 651
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EA +++ +L+ G+ PD Y L
Sbjct: 652 ERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 682
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 109/259 (42%), Gaps = 45/259 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF------- 177
+I+A + K F + +++++ C P T++++L G L + + V
Sbjct: 368 MIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFM 427
Query: 178 ---------REMRKYGLPPSAV------------------VYNSYIDGLLKGGNPQKAVE 210
R + K G A Y S ++ L G +A++
Sbjct: 428 NKSIYAYLVRTLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALD 487
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++ T Y +++ GK K+ L+ +M+ P+I +Y L+++F
Sbjct: 488 LLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFG 547
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
R G EEA +IFE+L+ + +PD+ ++N+L+ EA+ M G PD
Sbjct: 548 RAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVV 607
Query: 320 SYNIMVDAYGRAGLHEGKC 338
+Y+ +++ +G+ E C
Sbjct: 608 TYSTLIECFGKTDKVEMAC 626
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ ++A + EL +S C P ++ L+ +G +++A F+EMR+
Sbjct: 541 ILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREE 600
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F M + C P+ TY ++++ ++ ++ A
Sbjct: 601 GLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEA 660
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +++ P+ TY L
Sbjct: 661 VDLYAKLKQQGLTPDSITYAVL 682
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 34/190 (17%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG------------ 203
TY LL+A+ S KA V+ E+R+ G YN +D L K
Sbjct: 227 TYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKLTWNLLLVCLQ 286
Query: 204 --------------------NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ +F+ MKR C+P TYT+MI + GK K+ +
Sbjct: 287 IAELLDCLTVALDNDKIISVEVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADES 346
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LF EM PN+ Y ++ A A + ++ +F ++ P+ + ++ ++
Sbjct: 347 LTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNV 406
Query: 304 YRLISRMHMG 313
L++ +G
Sbjct: 407 --LVAEGQLG 414
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 53/265 (20%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKA 173
L+ C+++ L K + + + Y+ D + C P E TY ++++ G +++
Sbjct: 290 LLDCLTVAL---DNDKIISVEVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADES 346
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+F+EM + G P+ + YN+ I L K + +F +M + C+P+ T+++++N+
Sbjct: 347 LTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNV 406
Query: 234 -----------------------------------YGKASKSFMALKLFNEMRSHKCKPN 258
G AS++ L L + H + +
Sbjct: 407 LVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLLHLQYDWSFHD-EGD 465
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLIS 308
Y +++ + G EA ++ ++ I D YN ++ A + L
Sbjct: 466 RDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYE 525
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAG 332
+M G PD SYNI++ ++GRAG
Sbjct: 526 KMKQDGPSPDIFSYNILISSFGRAG 550
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A+ +M + G+ S N I G+ GG F +K+ Q + TY
Sbjct: 174 LDLIRAILDDMERCGVRGSISTINILI-GIFGGG--ADVERCFDLVKKWDLQMNCYTYKC 230
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG--------LCEEAEEI 281
++ + +++ S A +++ E+R K +I Y L++A A++ +C + E+
Sbjct: 231 LLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKLTWNLLLVCLQIAEL 290
Query: 282 FEQLQGAGIEPDVYA--YNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ L A + + + + ++ + R H CEPD +Y IM+ G+ G
Sbjct: 291 LDCLTVALDNDKIISVEVDQVYMVFKDMKRKH--CEPDEYTYTIMIRMTGKIG 341
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 102/189 (53%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y +L++ C +G +A + ++ + + V+YN+ + L K +++++
Sbjct: 403 DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 462
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P +Y ++I+ +G+A + A+K+F E+ + CKP+I ++ +L+N + G
Sbjct: 463 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 522
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F++++ G+ PDV Y+ L+E + ++ M GC P+ +YNI
Sbjct: 523 IDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 582
Query: 324 MVDAYGRAG 332
++D R+G
Sbjct: 583 LLDCLERSG 591
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 152 PTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P+ D +Y +L+ ++ +G +E+A +F E+ P + +NS I+ L K G+ +A
Sbjct: 468 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAH 527
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M+ + P TY+ +I +GK K MA +LF+EM + C PNI TY L++
Sbjct: 528 MRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCL 587
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EA +++ +L+ G+ PD Y L
Sbjct: 588 ERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 618
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 13/190 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+A+ S KA V+ E+R+ G YN +D L K + +F+ M
Sbjct: 227 TYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDM 286
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR C+P TYT+MI + GK K+ +L LF EM PN+ Y ++ A A +
Sbjct: 287 KRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMV 346
Query: 276 EEAEEIFEQL----QGAGIEPDVYAY--------NALMEAYRLISRM-HMGCEPDRASYN 322
++ +F ++ + +YAY EA+RL M E DR +Y
Sbjct: 347 DKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYM 406
Query: 323 IMVDAYGRAG 332
M+++ AG
Sbjct: 407 SMLESLCDAG 416
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 13/227 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLD--SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+I+A + K F + +++ S + YA L++ G +A +F M
Sbjct: 336 MIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWS 395
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ Y S ++ L G +A+++ ++ T Y +++ GK K+
Sbjct: 396 FHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSD 455
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
L+ +M+ P+I +Y L+++F R G EEA +IFE+L+ + +PD+ ++N+L+
Sbjct: 456 LHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLIN 515
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
EA+ M G PD +Y+ +++ +G+ E C
Sbjct: 516 CLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMAC 562
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 13/222 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + + + ++ C P E TY ++++ G +++ +F+EM +
Sbjct: 265 MLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEK 324
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP--STETYTLMINLYGKASKSF 241
G P+ + YN+ I L K + +F +M + + Y ++ K +
Sbjct: 325 GYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHAS 384
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +LF M S + + Y +++ + G EA ++ ++ I D YN ++
Sbjct: 385 EAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVL 444
Query: 302 EA----------YRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
A + L +M G PD SYNI++ ++GRAG
Sbjct: 445 SALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAG 486
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ ++A + EL +S C P ++ L+ +G +++A F+EMR+
Sbjct: 477 ILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREE 536
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F M + C P+ TY ++++ ++ ++ A
Sbjct: 537 GLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEA 596
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +++ P+ TY L
Sbjct: 597 VDLYAKLKQQGLTPDSITYAVL 618
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 65/131 (49%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
E F ++K+ L + Y + L+ N KA E++ ++R + Y ++++
Sbjct: 209 VERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLD 268
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
K +K +F +M+ C+P+ TYT ++ + G +E+ +F+++ G P
Sbjct: 269 ALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTP 328
Query: 293 DVYAYNALMEA 303
++ AYN +++A
Sbjct: 329 NLIAYNTMIQA 339
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A + E+ + P TY+ L++ + + +E A +F EM G
Sbjct: 513 LINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEG 572
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
P+ V YN +D L + G +AV+++ ++K+ P + TY ++ L
Sbjct: 573 CSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERL 621
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ S P E TY+LL+ AY +G E A V +EM G
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ V++ + G QK+ ++ + M+ P Y +MI+ +GK + AL
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHAL 451
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+ MR +P+ T+ L++ + G +AEE+FE +Q +G P YN ++ ++
Sbjct: 452 ATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF 511
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
L+ +M G + +Y +VD YG++G
Sbjct: 512 GEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSG 550
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ +Y + +K+ E+ +S P Y +++ + L+ A A F MR G
Sbjct: 402 ILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEG 461
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P AV +N+ ID K G+ KA E+F+ M+ C P T TY +MIN +G+ +
Sbjct: 462 VQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVK 521
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +M+S N+ TYT LV+ + + G ++A E E ++ G++P YNAL+ AY
Sbjct: 522 TLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAY 581
Query: 305 --RLISRMHM---------GCEPDRASYNIMVDAYG 329
R +S + G +P N +++A+G
Sbjct: 582 AQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFG 617
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T ++ A +G E+AEA+F E+++ GL P YN+ + G +K G+ + A I
Sbjct: 289 PKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESI 348
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+R P TY+L+I+ Y A + A + EM + +PN ++ ++ ++
Sbjct: 349 VSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRD 408
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
G +++ ++ +++ +G+ PD + YN +++ + RM M G +PD +
Sbjct: 409 RGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVT 468
Query: 321 YNIMVDAYGRAGLH 334
+N ++D + ++G H
Sbjct: 469 WNTLIDCHCKSGHH 482
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AY + A E+ S P ++ +L +Y G +K+ V REMR
Sbjct: 366 LLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS 425
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A+ F RM+ + QP T+ +I+ + K+ A
Sbjct: 426 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 485
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF M+ C P TY ++N+F + E+ + + ++Q G+ +V Y L++
Sbjct: 486 EELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDI 545
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
Y R +G +P YN +++AY + GL E
Sbjct: 546 YGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSE 588
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 17/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ +I A G ++AE + EL + +P Y LLK Y +G L+ AE++ EM +
Sbjct: 295 VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 354
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASK 239
G P Y+ ID G + A + + M+ +P++ ++ ++ Y GK K
Sbjct: 355 SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQK 414
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
SF L+ EMR+ P+ Y +++ F + + A F++++ G++PD +N
Sbjct: 415 SFQVLR---EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNT 471
Query: 300 LME----------AYRLISRMH-MGCEPDRASYNIMVDAYG 329
L++ A L M GC P +YNIM++++G
Sbjct: 472 LIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFG 512
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + H KAE + + +S C P TY +++ ++ E + + +M+ G
Sbjct: 472 LIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQG 531
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + V Y + +D + G + A+E + MK +PS+ Y +IN Y + S A+
Sbjct: 532 LLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAI 591
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F MR+ KP++ +L+NAF + EA + + ++ ++PDV Y LM+A
Sbjct: 592 NAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKAL 651
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDA 327
+ + GC PDR + ++ A
Sbjct: 652 IRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSA 685
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL R T TY L+ A + LEKA + MR+ G P V Y+ I L +
Sbjct: 175 LLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNK 234
Query: 205 PQKAV--EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++ +I+ ++ D + + +I + K+ A+ ++ + P T
Sbjct: 235 SDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATL 294
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM 312
A++ A G EEAE IFE+L+ G+ P AYNAL++ Y ++S M
Sbjct: 295 VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 354
Query: 313 -GCEPDRASYNIMVDAYGRAGLHE 335
G PD +Y++++DAY AG E
Sbjct: 355 SGFSPDEHTYSLLIDAYANAGRWE 378
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ + SG + +A + ++ GL P + I L G ++A IF+ +K
Sbjct: 262 IIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGG 321
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P T Y ++ Y K A + +EM P+ TY+ L++A+A G E A
Sbjct: 322 LMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESAR 381
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAY 328
+ ++++ +G+ P+ Y ++ ++ +YR L + G PDR YN+M+D +
Sbjct: 382 IVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTF 441
Query: 329 GR 330
G+
Sbjct: 442 GK 443
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 9/233 (3%)
Query: 86 FDSLPPTHATWDDLINVSVQLRLNKKWDPIV-------LMSCVSI--LLIEAYGQKSLHK 136
+ + P TW+ LI+ + + K + + C + ++I ++G++ +
Sbjct: 459 MEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWE 518
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ ++ + TY L+ Y SG + A M+ GL PS+ +YN+ I
Sbjct: 519 DVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALI 578
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ + G ++A+ F+ M+ D +PS +IN +G+ + A + M+ + K
Sbjct: 579 NAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLK 638
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
P++ TYT L+ A R ++ ++E++ +G PD A L A R + R
Sbjct: 639 PDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSALRYMER 691
>gi|357116934|ref|XP_003560231.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Brachypodium distachyon]
Length = 922
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 117/222 (52%), Gaps = 15/222 (6%)
Query: 125 LIEAYGQKSLHKKAE--FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+I+A+ ++ L ++AE F Y + + E Y +++KAY ++ ++ ++ M++
Sbjct: 452 IIDAFAERCLWEEAEHVFHYARGVGGKRDIVE--YNVMVKAYGLAKRYDRVTSLLENMKE 509
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P YNS I GG PQ+A ++ ++MK +PS ETY+ +I Y + +
Sbjct: 510 SGISPDECTYNSLIQMFSAGGFPQRANKLLRKMKETGLKPSCETYSAIIRTYSHSFLASE 569
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+ L+NEM++ +PN+ Y L++ FA G E+A ++ +GI P+ +L++
Sbjct: 570 AIDLYNEMKASDVEPNVVVYGLLIDMFAETGQVEKALHYSNLMEESGITPNHIVLTSLIK 629
Query: 303 AYR----------LISRM-HMGCEPDRASYNIMVDAYGRAGL 333
AY L +RM +M PD + N M++ Y + GL
Sbjct: 630 AYSKVNCWKEAQGLYARMGNMDGGPDTIASNSMLNLYAKLGL 671
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 88/181 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++AYG + + + +S P E TY L++ + G ++A + R+M++
Sbjct: 486 VMVKAYGLAKRYDRVTSLLENMKESGISPDECTYNSLIQMFSAGGFPQRANKLLRKMKET 545
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS Y++ I +A++++ MK +P+ Y L+I+++ + + A
Sbjct: 546 GLKPSCETYSAIIRTYSHSFLASEAIDLYNEMKASDVEPNVVVYGLLIDMFAETGQVEKA 605
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L N M PN T+L+ A+++ +EA+ ++ ++ PD A N+++
Sbjct: 606 LHYSNLMEESGITPNHIVLTSLIKAYSKVNCWKEAQGLYARMGNMDGGPDTIASNSMLNL 665
Query: 304 Y 304
Y
Sbjct: 666 Y 666
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 45/209 (21%)
Query: 141 TYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
T+L ++ D PT Y L A +GL +++ + MR G+ P V N+++ L
Sbjct: 144 TWLRMVRDDALTPTNPAYTALADALAKAGLAQESLLLLLHMRAQGVAPDEVSMNTFVRIL 203
Query: 200 LKGGNPQKAVEIF--------------------------QRMKRDCCQ-------PS--- 223
G A+ +F Q + D C PS
Sbjct: 204 KDDGRYSDALALFNNWCDGRFDVEFLHLDYTTVSCHGQMQFLLADLCHDKLDSAGPSGVE 263
Query: 224 --------TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
TY +I LYGKA + A+++F +M ++ P+I T+ ++N F G
Sbjct: 264 EVPRKPKLVVTYNTLIALYGKAGRLKDAMEMFVDMLVYQVVPDIYTFNTMINVFGLHGRM 323
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E AE + + G+ PD+ YN +M +
Sbjct: 324 EVAEALLANMVIRGVTPDIKTYNVMMTVF 352
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ ++ + ++AE E++ S +++K Y G L+KA VF E
Sbjct: 382 VVLQVLCERKMVREAEDVIEEIMQSGTCVLGQFLPVVMKMYIDQGFLDKAH-VFFERHFR 440
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L S+ + + ID + ++A +F + + Y +M+ YG A +
Sbjct: 441 ALEVSSKIVAAIIDAFAERCLWEEAEHVFHYARGVGGKRDIVEYNVMVKAYGLAKRYDRV 500
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L M+ P+ CTY +L+ F+ G + A ++ +++ G++P Y+A++
Sbjct: 501 TSLLENMKESGISPDECTYNSLIQMFSAGGFPQRANKLLRKMKETGLKPSCETYSAIIRT 560
Query: 302 --------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGLHEGKCSYS 341
EA L + M EP+ Y +++D + G E YS
Sbjct: 561 YSHSFLASEAIDLYNEMKASDVEPNVVVYGLLIDMFAETGQVEKALHYS 609
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 109 NKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
N K I C LI+ + ++A ++ ++ P+ +TY+ +++ Y S
Sbjct: 506 NMKESGISPDECTYNSLIQMFSAGGFPQRANKLLRKMKETGLKPSCETYSAIIRTYSHSF 565
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
L +A ++ EM+ + P+ VVY ID + G +KA+ M+ P+ T
Sbjct: 566 LASEAIDLYNEMKASDVEPNVVVYGLLIDMFAETGQVEKALHYSNLMEESGITPNHIVLT 625
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I Y K + A L+ M + P+ +++N +A+ GL EA+ IF+ L+
Sbjct: 626 SLIKAYSKVNCWKEAQGLYARMGNMDGGPDTIASNSMLNLYAKLGLVIEAKAIFDNLRRN 685
Query: 289 GIEPDVYAYNALMEAY 304
+ D +Y +M Y
Sbjct: 686 N-QADHVSYITMMFLY 700
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 100/254 (39%), Gaps = 45/254 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YG+ K A ++++L + +P T+ ++ + + G +E AEA+ M G
Sbjct: 278 LIALYGKAGRLKDAMEMFVDMLVYQVVPDIYTFNTMINVFGLHGRMEVAEALLANMVIRG 337
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN + G+ + ++ + ++ R +Y +++ + + A
Sbjct: 338 VTPDIKTYNVMMTVFASMGDVEGVLKYYHQIGRTGLCADVVSYRVVLQVLCERKMVREAE 397
Query: 245 KLFNE-MRSHKC--------------------KPNIC-------------TYTALVNAFA 270
+ E M+S C K ++ A+++AFA
Sbjct: 398 DVIEEIMQSGTCVLGQFLPVVMKMYIDQGFLDKAHVFFERHFRALEVSSKIVAAIIDAFA 457
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRA 319
L EEAE +F +G G + D+ YN +++AY L R G PD
Sbjct: 458 ERCLWEEAEHVFHYARGVGGKRDIVEYNVMVKAYGLAKRYDRVTSLLENMKESGISPDEC 517
Query: 320 SYNIMVDAYGRAGL 333
+YN ++ + G
Sbjct: 518 TYNSLIQMFSAGGF 531
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P V YN+ I K G + A+E+F M P T+ MIN++G + +A
Sbjct: 269 PKLVVTYNTLIALYGKAGRLKDAMEMFVDMLVYQVVPDIYTFNTMINVFGLHGRMEVAEA 328
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L M P+I TY ++ FA G E + + Q+ G+ DV +Y +++
Sbjct: 329 LLANMVIRGVTPDIKTYNVMMTVFASMGDVEGVLKYYHQIGRTGLCADVVSYRVVLQ 385
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LLI+ + + +KA Y L++ I P L+KAY ++A+ ++ M
Sbjct: 591 LLIDMFAETGQVEKA-LHYSNLMEESGITPNHIVLTSLIKAYSKVNCWKEAQGLYARMGN 649
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
P + NS ++ K G +A IF ++R+ Q +Y M+ LY
Sbjct: 650 MDGGPDTIASNSMLNLYAKLGLVIEAKAIFDNLRRNN-QADHVSYITMMFLYSNMCMLNE 708
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
++K+ +E+++ + +Y A++ + +G E E+ +++ P+ + +
Sbjct: 709 SIKIAHELQNSSLISDHDSYNAVMACYMAKGNLRECAELVQKMLEDKTFPNASTFRMIFS 768
Query: 303 AYRLIS 308
A + I+
Sbjct: 769 AVKNIN 774
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 52/267 (19%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
IVL S LI+AY + + K+A+ Y + + P +L Y GL+ +A+
Sbjct: 622 IVLTS-----LIKAYSKVNCWKEAQGLYARMGNMDGGPDTIASNSMLNLYAKLGLVIEAK 676
Query: 175 AVFREMRK-----------------------------YGLPPSAVV-----YNSYIDGLL 200
A+F +R+ + L S+++ YN+ + +
Sbjct: 677 AIFDNLRRNNQADHVSYITMMFLYSNMCMLNESIKIAHELQNSSLISDHDSYNAVMACYM 736
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
GN ++ E+ Q+M D P+ T+ ++ + + + ++ ++ ++ N
Sbjct: 737 AKGNLRECAELVQKMLEDKTFPNASTFRMIFS--AVKNINILSEEVLQLESAYSDGRNSA 794
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
+ F+ G+ A I E + D AYN + A+ L ++M
Sbjct: 795 KQAIIAFLFSTAGMHAAALNICEHFLKPELTIDPCAYNVAFKVYASCGEVDKAFSLFTKM 854
Query: 311 HM-GCEPDRASYNIMVDAYGRAGLHEG 336
H G +PD +Y + YG +G+ EG
Sbjct: 855 HASGFKPDPVTYIHLSTCYGISGMSEG 881
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 13/222 (5%)
Query: 142 YLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y E D+ I P TY L+ C + + A + M G P+ +VY++ IDG
Sbjct: 595 YFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFC 654
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G A E+F RM + PS TYT +I+ K + +A+K+ +EM + C PN+
Sbjct: 655 KIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVV 714
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
TYTA+++ ++ G E+A + ++ G P+V Y AL++ + +L +M
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774
Query: 311 HM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ GC P+ +Y ++++ AGL + + L E+ H+P
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLD-EAHLLLDEMKHTHWP 815
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P TY ++ C + +EK+ +F+EM++ G+ P Y ID K G
Sbjct: 442 EMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAG 501
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A F M+ C P+ TYT +++ Y K+ + A +F+ M C PN TY+
Sbjct: 502 LIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYS 561
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG----------------IEPDVYAYNALM------ 301
AL++ + G ++A E++E+L G I P+V Y AL+
Sbjct: 562 ALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKA 621
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A+ L+ M GCEP++ Y+ ++D + + G
Sbjct: 622 QKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
E Y E+L + C+ + A + C G EKA + +EM + G P Y I
Sbjct: 401 VEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVIT 460
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + +K+ +FQ MKR P TYT++I+ + KA A F+EMRS C P
Sbjct: 461 FLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSP 520
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + +A +IF ++ A P+ Y+AL++ + CE
Sbjct: 521 NVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACE 578
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A+ +L + +P+ TY L+ G L+ A V EM
Sbjct: 649 LIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDS 708
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y + IDGL K G +KA+ + M+ C P+ TYT +I+ GK K+ +L
Sbjct: 709 CNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASL 768
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF +M S C PN TY L+N GL +EA + ++++ + Y+ ++ +
Sbjct: 769 KLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF 828
Query: 305 --RLISRMHMGCE-------PDRASYNIMVDAYGRAG 332
+ I+ + + E P Y +++D++ +AG
Sbjct: 829 SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAG 865
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + L ++A + E+ C P TY LL AY S L +A +F M
Sbjct: 492 ILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA 551
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM--------------KRDCCQ--PSTETY 227
P+AV Y++ IDGL K G QKA E+++++ D C P+ TY
Sbjct: 552 ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPN----------------------------- 258
+I+ KA K A +L + M + C+PN
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671
Query: 259 ------ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---------- 302
+ TYT+L++ ++G + A ++ ++ P+V Y A+++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A L+S M GC P+ +Y ++D G+ G
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 145/393 (36%), Gaps = 103/393 (26%)
Query: 41 GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRF-VQREV-------DSNTIWDAFDSLPPT 92
G L+ G++ + + + VL+ Q + F VQ+E+ D +TI +L
Sbjct: 193 GRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKV 252
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
W D +N+ + N D ++ +S L+ + SL +A + + CIP
Sbjct: 253 -GRWADALNMLEKEDFN--LDTVLCTQMISGLM-----EASLFNEAMSFLHRMRCNSCIP 304
Query: 153 TEDTYALLLK-----------------------------------AYCMSGLLEKAEAVF 177
TY LL YC +G A +F
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLF 364
Query: 178 REMRKYGLPPSAVVYNSYIDG--------------------------------------- 198
M G PP V YN +I
Sbjct: 365 NRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFS 424
Query: 199 --LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
L G +KA +I + M R P T TYT +I +A K + LF EM+
Sbjct: 425 RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P++ TYT L+++F + GL E+A F++++ G P+V Y AL+ AY +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
RM C P+ +Y+ ++D +AG + C
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKAC 577
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 71/231 (30%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L+ C P TY ++ G +EKA + M + G P+ V Y + IDGL K G
Sbjct: 703 EMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMIN------------------------------- 232
++++F++M C P+ TY ++IN
Sbjct: 763 KADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYH 822
Query: 233 --LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG----------------- 273
+ G + K +L L EM SH+ P Y L+++F++ G
Sbjct: 823 CAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSS 882
Query: 274 ----------------LC-----EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LC EEA ++ ++ GI PD+ + +L++
Sbjct: 883 SLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKG 933
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 43/210 (20%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L++ C GL ++A ++ +G PSAV YN+ + L G + + + M
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233
Query: 219 --CCQPST-----------------------ETYTLMINLYGKASKSFMALKLFNE---- 249
C ST E + L L + M LFNE
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSF 293
Query: 250 ---MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---- 302
MR + C PN+ TY L++ F ++ + I + G P+ +N+L+
Sbjct: 294 LHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCN 353
Query: 303 ------AYRLISRMHM-GCEPDRASYNIMV 325
AY+L +RM G P +YNI +
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFI 383
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
LHK+ +E+ S + + YA L++A C++ +E+A ++ EM + G+ P +V+
Sbjct: 873 LHKE----LVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFV 928
Query: 194 SYIDGLLKGGNPQKAVEI 211
S + GL++ +A+++
Sbjct: 929 SLVKGLIEVNKWDEALQL 946
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q+ ++A + +++ R P TY L+ C + +E A +F+EM G P+ V
Sbjct: 161 QEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV 220
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YN+ IDG K + A ++F +M R C P+ TYT +I+ K+ K A ++ + M
Sbjct: 221 SYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 280
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
PN+ TY+ L++ F + +EA ++ EQ+ GI P V YN L+
Sbjct: 281 VKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKL 340
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMVDA 327
+A++L M C P +YN ++ A
Sbjct: 341 EDAFKLFRGMAQRRCHPTVVTYNTLLRA 368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PTE +Y L+ +C L A+ VF +M + P+ V Y + IDGL K G Q A E
Sbjct: 216 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAE 275
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M + P+ TY+ +I+ + K + A KL +M + P + TY L+N+
Sbjct: 276 VLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC 335
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRM-HMGCEPDRA 319
R E+A ++F + P V YN L+ A +RL + M GC PD
Sbjct: 336 RADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAI 395
Query: 320 SYNIMVDAYGRAG-LHEGK 337
+Y+ + RAG +HE +
Sbjct: 396 TYDTLAWGLTRAGKVHEAQ 414
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+E + +R I P Y +L C +E+A +F +M K + P+ V YN+ I+GL K
Sbjct: 137 VEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCK 196
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A E+F+ M P+ +Y +I+ + K A +F++M C PN+ T
Sbjct: 197 AWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVT 256
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
YT L++ ++ G + A E+ + + G+ P+V Y+ L+ EA++L+ +M
Sbjct: 257 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 316
Query: 311 HMGCEPDRASYNIMVDAYGRA 331
G P +YNI++++ RA
Sbjct: 317 TQGIAPTVVTYNILLNSLCRA 337
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A+ + +++ S C+P TY L+ SG ++ A V M K G
Sbjct: 225 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y+ IDG K +A ++ ++M P+ TY +++N +A K A
Sbjct: 285 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 344
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF M +C P + TY L+ A + A ++ ++ G PD Y+ L
Sbjct: 345 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 404
Query: 305 RLISRMH 311
++H
Sbjct: 405 TRAGKVH 411
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
Query: 72 FVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVS-----ILLI 126
+V EV NT+ D F A D +D +V +CV LI
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKD-------------VFDKMVRSNCVPNVVTYTTLI 261
Query: 127 EAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
+ + + A ++ P TY+ L+ +C +++A + +M G+
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ V YN ++ L + + A ++F+ M + C P+ TY ++ + A +L
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ EM + C P+ TY L R G EA+E+ E+++
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ ++ C +E+A + +M +Y PP A+ Y ++ L K A+ + M
Sbjct: 83 YSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMA 141
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P Y +++ + K A LF +M + PN+ TY L+N + E
Sbjct: 142 TRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIE 201
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
A E+F+++ G G P +YN L++ + + +M C P+ +Y ++
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261
Query: 326 DAYGRAG 332
D ++G
Sbjct: 262 DGLSKSG 268
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 3/160 (1%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P A +N+ DG K G ++ E++Q M Y ++I+ K A KL
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
+ MR + K Y+ ++N + EEA E+ E++ PD Y ++E
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126
Query: 307 ISRMH--MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
R+ + + A+ I DA+ + G C VE
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 166
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +LL + C + LE A +FR M + P+ V YN+ + L A +
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ M C P TY + +A K A +L +M+ K P
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 53/351 (15%)
Query: 40 CGSLRGKGWKYGSGFVDGIFPVLSPTAQ-QILRFVQREVDSNTI--WDAFDSLPPTHATW 96
C + +G+++ S + + +L+ T Q + + + E+ + D F A
Sbjct: 117 CWAGEKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAAA 176
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
+ L KK++ V + ++ LL ++ G+ L K+A+ + E L R P T
Sbjct: 177 KERKKAVAMFELMKKYNYKVGVETINHLL-DSLGRAKLGKEAQALF-ENLKGRFTPNLRT 234
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL---------------- 200
Y +LL +C L +A +V+ EM G P V +N ++GLL
Sbjct: 235 YTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMK 294
Query: 201 -KGGNP------------------QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
KG +P ++AVE FQ M C+P YT +I +G +
Sbjct: 295 AKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMD 354
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
M L EM+ C P+ TY AL+ R + ++A I++++ +GIEP ++ YN +M
Sbjct: 355 MVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIM 414
Query: 302 EAYRLISRMHMG------------CEPDRASYNIMVDAYGRAGLHEGKCSY 340
++Y MG C PD SY +++ G C Y
Sbjct: 415 KSYFQTRNYEMGRAVWDEMSRKGFC-PDDNSYTVLIGGLISQGRSGEACKY 464
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++S ++A + E++DS C P Y L+ + ++ + +EM++
Sbjct: 307 ILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEE 366
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PP + YN+ I + + P A I+++M + +P+ TY +++ Y + M
Sbjct: 367 GCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMG 426
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+++EM P+ +YT L+ +G EA + E++ G++ YN
Sbjct: 427 RAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYN 481
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 19/216 (8%)
Query: 135 HKKAEFT--YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM----RKYGL--P 186
H+ +E T +L + C P TY L+K C +G + A + +EM +Y +
Sbjct: 153 HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ + YN +DGL K G +A ++F+ MK PS +Y +I+ + A K + +L
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
+EM +P++ T+ L++ +EG EA+++ + +GI PD+ YN+L+E + +
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 332
Query: 307 ISRMH-----------MGCEPDRASYNIMVDAYGRA 331
+ ++ GCEPD SYN++++ Y +
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 368
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 19/195 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +LL C L + A F + + G P+ V YN+ I GL +A +F RM
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165
Query: 216 KRDCCQPSTETY-TLMINLYGKASKSFMALKLFNEMRSH------KCKPNICTYTALVNA 268
++ C P TY TL+ L G + + +ALKL EM + CKPN+ TY +V+
Sbjct: 166 QKLGCTPDVVTYGTLIKGLCGTGNIN-IALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
+ G +EA+++FE+++ G+ P + +YN+L+ E+ RL+ M G +PD
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284
Query: 318 RASYNIMVDAYGRAG 332
++N+++D + G
Sbjct: 285 MVTFNVLIDTLCKEG 299
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + ++A Y E+L P TY LLK ++G ++ A+ +F M+ +
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ ++ Y ++DGL K +A+++F +K + E +I+ KA K A
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 479
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF ++ + +PN+ TYT +++ F REG ++A + ++++ G PD+ YN LM
Sbjct: 480 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 539
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
E +L+ RM PD + +I+VD +
Sbjct: 540 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+LD P T+ +L+ C G + +A+ + M + G+ P V YNS I+G G
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A E+F M C+P +Y ++IN Y K K A+KL+NEM +PN+ TY
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRMH-M 312
+L+ G ++A+++F ++ GI + Y Y + L EA +L + +
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 313 GCEPDRASYNIMVDAYGRAG 332
+ + + N ++D +AG
Sbjct: 455 NFKLEIENLNCLIDGLCKAG 474
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE + A ++ + C P +Y +L+ Y + +E+A ++ EM G
Sbjct: 326 LIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 385
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ + Y+S + G+ G A ++F MK ++ TY + ++ K F A+
Sbjct: 386 KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAM 445
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF E++S K I L++ + G E A E+FE+L G EP+V Y ++ +
Sbjct: 446 KLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGF 505
Query: 305 ----------RLISRMHM-GCEPDRASYNIMVDAY 328
LI +M GC PD +YN ++ +
Sbjct: 506 CREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 540
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP+ +Y L+ +C +G E+++ + EM GL P V +N ID L K G +A +
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M P TY +I + A +LF M S C+P++ +Y L+N ++
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRA 319
+ EEA +++ ++ G P+V Y++L+ +A +L S M G +
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426
Query: 320 SYNIMVDAYGRAGLHEGKCSYSLVEL 345
+Y I +D GL + C + ++L
Sbjct: 427 TYGIFLD-----GLCKNDCLFEAMKL 447
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 19/204 (9%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAV--FREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
S IP+ + +C +G + A+ F M + PS +N + GL K +
Sbjct: 26 SSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHY 85
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ ++ +M+ T +++N ++ F + PNI TY L
Sbjct: 86 SQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTL 145
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------------EAYRLIS 308
+ E EA +F ++Q G PDV Y L+ E IS
Sbjct: 146 IKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDIS 205
Query: 309 RMHMGCEPDRASYNIMVDAYGRAG 332
R + C+P+ +YNI+VD + G
Sbjct: 206 RYEINCKPNVITYNIIVDGLCKVG 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ C +G LE A +F ++ G P+ V Y I G + G KA + Q+M+ +
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
C P TY ++ + +++K ++L + M P+ T + +V+ +++
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 578
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 44/88 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ +C G ++KA + ++M G P + YN+ + G + ++ V++
Sbjct: 493 PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 552
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
RM + P T ++++++ K K
Sbjct: 553 LHRMAQKDVSPDAITCSIVVDMLSKDEK 580
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +++ ++ GL++KA +F EM P V YNS I+ L K G+ +A
Sbjct: 457 VPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHM 516
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F+ M+ P TY+++I +GK++K MA LF+EM + C PNI TY L++
Sbjct: 517 LFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLE 576
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EA + +E L+ G+ PD Y+ L
Sbjct: 577 RRGKTTEAHKFYETLKQQGLTPDSITYSIL 606
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 92 THATWDDLINVSVQL-RLNKKWDPIVLMSC----VSILLIEAYGQKSLHKKAEFTYLELL 146
T++ D+++ QL RLN+ D + C V LI+A + +A + +
Sbjct: 325 TYSIMLDVLSTGGQLHRLNEILD--ICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMW 382
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+S + +L+A C + +A + M + G+ +YN L K
Sbjct: 383 NSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVS 442
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
++ M+ + P TY +MI+ +G+ A +LF EM CKP++ TY +++
Sbjct: 443 FMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMI 502
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCE 315
N + G +EA +F+ +Q G +PDV+ Y+ L+E + +++ M GC
Sbjct: 503 NCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCI 562
Query: 316 PDRASYNIMVDAYGRAG 332
P+ +YNI++D R G
Sbjct: 563 PNIVTYNILLDCLERRG 579
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 45/259 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL----------------------- 161
+IEA G+ + +A F ++++S C P + TY+++L
Sbjct: 294 VIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCL 353
Query: 162 ---------KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
KA C SG +A +VF M + S ++ L +A+++
Sbjct: 354 NRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLL 413
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASK-SFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M Y ++ + GK + SFM+ L++ MR++ P++ TY ++++F R
Sbjct: 414 HMMPEKGITTDVGMYNMIFSALGKLKQVSFMS-SLYDTMRANGVVPDVFTYNIMISSFGR 472
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
GL ++A E+FE+++ +PDV YN+++ EA+ L M G +PD +
Sbjct: 473 VGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFT 532
Query: 321 YNIMVDAYGRAGLHEGKCS 339
Y+I+++ +G++ + CS
Sbjct: 533 YSILIECFGKSNKVDMACS 551
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++A+ S + K V+ +MR+ G YN ++ L K G +A ++F+ M
Sbjct: 185 TYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDM 244
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K++ C P TYT++I + GKA K+ + L EM S C N+ Y ++ A + +
Sbjct: 245 KQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMV 304
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM---------GCEPDRASYNIMVD 326
+EA + ++ + P+ + Y+ +++ ++H GC +R Y+ ++
Sbjct: 305 DEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCL-NRPVYSYLIK 363
Query: 327 AYGRAG 332
A ++G
Sbjct: 364 ALCKSG 369
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+GL + Y + L+ K E++++M+R + Y +++N KA
Sbjct: 176 KWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVD 235
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +M+ + C P+ TYT L+ + G + + E++ G ++ AYN ++
Sbjct: 236 QAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVI 295
Query: 302 EA-----------YRLISRMHMGCEPDRASYNIMVDAYGRAG-LH 334
EA + L + C P++ +Y+IM+D G LH
Sbjct: 296 EALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLH 340
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A + + +A + ++ + C P TY +L++ +G K ++ EM
Sbjct: 223 MLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSE 282
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + + YN+ I+ L K +A+ + +M C+P+ TY++M+++ +
Sbjct: 283 GCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQ---- 338
Query: 244 LKLFNEMRSHKCKPNICT-------YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
L NE+ +IC+ Y+ L+ A + G EA +F ++ + + D YA
Sbjct: 339 LHRLNEIL------DICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYA 392
Query: 297 YNALMEAY-------RLISRMHM----GCEPDRASYNIMVDAYGR 330
+ +++EA I +HM G D YN++ A G+
Sbjct: 393 FVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGK 437
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I ++G+ L KA + E+ D C P TY ++ +G L++A +F++M++
Sbjct: 465 IMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEK 524
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ I+ K A +F M C P+ TY ++++ + K+ A
Sbjct: 525 GYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEA 584
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
K + ++ P+ TY+ L
Sbjct: 585 HKFYETLKQQGLTPDSITYSIL 606
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 59/116 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I G+ +A + ++ + P TY++L++ + S ++ A ++F EM G
Sbjct: 501 MINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQG 560
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P+ V YN +D L + G +A + ++ +K+ P + TY+++ L ++ ++
Sbjct: 561 CIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYSILERLESRSQRT 616
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY +L C SG A + R+M + + AV Y+ IDGL K G+ A +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ + TY +I + A + KL +M K PN+ T++ L+++F +
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
EG EA+++ +++ GI P+ YN+L++ + RL + M GC+PD +
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 321 YNIMVDAYGRA 331
+NI+++ Y +A
Sbjct: 406 FNILINGYCKA 416
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 87/160 (54%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P T+++L+ ++ G L +A+ + +EM + G+ P+ + YNS IDG K
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A+++ M C P T+ ++IN Y KA++ L+LF EM N TY
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LV F + G E A+++F+++ + PD+ +Y L++
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y++++ C G L+ A +F EM G + YN+ I G G ++ + M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P+ T++++I+ + K K A +L EM PN TY +L++ F +E E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMV 325
EA ++ + + G +PD+ +N L+ Y +R+ G E + +YN +V
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 326 DAYGRAG 332
+ ++G
Sbjct: 446 QGFCQSG 452
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C +G + + R+M K + P+ V ++ ID +K G ++A ++ + M
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+T TY +I+ + K ++ A+++ + M S C P+I T+ L+N + +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIM 324
++ E+F ++ G+ + YN L++ + ++ + PD SY I+
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 325 VDAYGRAGLHE------GKCSYSLVELSVKHY 350
+D G E GK S +EL + Y
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 66 AQQILR-FVQREVDSNTIWDAFDSLPPTHATWDDLINV--SVQLRLNKKWDPIVLMSCVS 122
A Q+L+ +QR + NTI ++SL + L V L ++K DP ++ +
Sbjct: 352 ADQLLKEMMQRGIAPNTI--TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI- 408
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI Y + + + E+ I TY L++ +C SG LE A+ +F+EM
Sbjct: 409 --LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P V Y +DGL G +KA+EIF ++++ + Y ++I+ ASK
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A LF + K + Y +++ R+ +A+ +F ++ G PD YN L+
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 303 AY 304
A+
Sbjct: 587 AH 588
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + LL C+ + +A + M + G P+ + N+ ++GL G AV +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM QP+ TY ++N+ K+ ++ +A++L +M K + Y+ +++ +
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G + A +F +++ G + D+ YN L+ + R G + P+ +
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 321 YNIMVDAYGRAG 332
+++++D++ + G
Sbjct: 336 FSVLIDSFVKEG 347
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++++ +C L A + ++ K G P V++N+ ++GL +A+E+ RM
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+P+ T ++N L GK S A+ L + M +PN TY ++N +
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSD---AVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASY 321
G A E+ +++ I+ D Y+ +++ A+ L + M + G + D +Y
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 322 NIMVDAYGRAG 332
N ++ + AG
Sbjct: 302 NTLIGGFCNAG 312
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + Q + A+ + E++ R P +Y +LL C +G LEKA +F ++ K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ +Y I G+ A ++F + + Y +MI+ + A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
LF +M P+ TY L+ A + A E+ E+++ +G DV
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 167 SGLL----EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
SGL+ + A +FR+M + P+ + +N + K + + + ++M+
Sbjct: 62 SGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAH 121
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
S T ++MIN + + K A ++ +P+ + L+N E EA E+
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV 181
Query: 283 EQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+++ G +P + N L+ +A LI RM G +P+ +Y +++ ++
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 332 G 332
G
Sbjct: 242 G 242
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 194 SYIDGL---LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
SY D L L G AV++F+ M + P+ + + + K + + L L +M
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
S +I T + ++N F R A ++ G EPD +N L+
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA L+ RM MG +P + N +V+
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNG 202
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C L KA+ +FR+M + G P + YN I L + A E+ + MK
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 217 RDCCQPSTETYTLMINLY--GKASKSFMAL 244
T ++IN+ G+ KSF+ +
Sbjct: 606 SSGFPADVSTVKMVINMLSSGELDKSFLDM 635
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+S +P E TY++ + C GL+E+A ++F +++ G+ + V+Y++ IDG K G
Sbjct: 477 ESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVS 536
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+ +M C P++ TY +I+ Y K A L + M +P TYT L+
Sbjct: 537 DGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILI 596
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCE 315
+ ++ ++A ++F+Q+ G PDV+ Y A + AY LI +M+ G
Sbjct: 597 DNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIM 656
Query: 316 PDRASYNIMVDAYGRAGLHEG 336
PD Y + +DAYGR G +G
Sbjct: 657 PDTMLYTLFIDAYGRFGSIDG 677
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 50/278 (17%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
D+ + + Q+ + W P V V I + G+K+ +A + E+ + C P T
Sbjct: 291 DEALKLFSQMHEDNCW-PTVRTYTVIIFALCQLGRKT---EALNMFKEMTEKHCQPNVHT 346
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +L+ + C + A+ + M + GL PS V YN+ IDG K G A+EI M+
Sbjct: 347 YTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLME 406
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE---- 272
+ C P+ TY +I + + A+ L ++M K +PN+ TY L++ +E
Sbjct: 407 SNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466
Query: 273 -------------------------------GLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
GL EEA +FE L+ GI+ + Y+ L+
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526
Query: 302 EAYRLISR-----------MHMGCEPDRASYNIMVDAY 328
+ Y + + + GC P+ +YN ++D Y
Sbjct: 527 DGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ YC + ++ A A+F M G + V Y + I G + +A+++F +M
Sbjct: 241 TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D C P+ TYT++I + + AL +F EM C+PN+ TYT L+ + +
Sbjct: 301 HEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNF 360
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIM 324
++A++I + G+ P V YNAL++ Y ++S M C P+ +YN +
Sbjct: 361 DDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNEL 420
Query: 325 VDAYGRA 331
+ + R
Sbjct: 421 ILGFCRG 427
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ I+ ++ L ++A + L + E Y+ L+ YC G + + +M
Sbjct: 489 VFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSA 548
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+++ YNS IDG K N ++A + M + +P+ +TYT++I+ K + A
Sbjct: 549 GCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQA 608
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F++M S P++ YTA ++A+ G ++AE + ++ GI PD Y ++A
Sbjct: 609 HDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Query: 304 Y----------RLISRMH-MGCEPDRASYNIMVDAYGRA 331
Y ++ RMH +GCEP +Y+ ++ A
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNA 707
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YLE+LD P T ++ YC G + +AE ++ + GL Y S I G
Sbjct: 191 VYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYC 250
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ N A IF M C + +YT +I+ + +A + ALKLF++M C P +
Sbjct: 251 RNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVR 310
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
TYT ++ A + G EA +F+++ +P+V+ Y L+ +A ++++ M
Sbjct: 311 TYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGM 370
Query: 311 -HMGCEPDRASYNIMVDAYGRAGL 333
G P +YN ++D Y + GL
Sbjct: 371 LEKGLIPSVVTYNALIDGYCKKGL 394
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + A +L + + C+ E +Y L+ +C + +++A +F +M +
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ Y I L + G +A+ +F+ M CQP+ TYT++I + S A
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+ N M P++ TY AL++ + ++GL A EI ++ P+ YN L+
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424
Query: 302 ----EAYRLISRMHMGCE----PDRASYNIMVDAYGRAG 332
++ +S +H E P+ +YNI++ + G
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 29/207 (14%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + +A + ++L + P Y + AYC G L+ AE + +M
Sbjct: 594 ILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAK 653
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----------- 232
G+ P ++Y +ID + G+ A I +RM C+PS TY+ +I
Sbjct: 654 GIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVS 713
Query: 233 --------LYGKASKSF----------MALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
G AS F L LF +M H C PN TY + + G
Sbjct: 714 SSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGC 773
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM 301
E A +F+ ++ G P+ YN+L+
Sbjct: 774 LEVAHRLFDHMKEKGQSPNEDIYNSLL 800
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 11/180 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +LL ++++ ++V+ EM + P+ N+ ++G K GN +A ++
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ T TYT +I Y + A +F M + C N +YT L++ F +
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA ++F Q+ P V Y ++ EA + M C+P+ +Y +++
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++++R +P D+ LLL G EKA+ VF + +V+ IDGLLK G
Sbjct: 819 MIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGL 878
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMI 231
K ++F M+ CQ +TY+++I
Sbjct: 879 SDKCSDLFGIMETQGCQIHPKTYSMLI 905
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L++ +C G + A++VF + K+GL PS V +N+ I+G +K G+ + + M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K K A +LFNEM + PN T+T L++ + +
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ G+ PD+ YN L+ + + LI M M G +PD+ SY ++
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGSCKEG 325
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-------RLNKKW-----DPIVL 117
+R Q D+ T W L P+ +++ LIN ++L RL P V
Sbjct: 152 MRLAQSVFDAITKW----GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVY 207
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+ LI ++ +A + E+LD+ +P T+ L+ +C + ++ A ++
Sbjct: 208 TYSI---LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIY 264
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
++M GL P + YN+ I GL K G ++ ++ M + +P +YT +I+ K
Sbjct: 265 KQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKE 324
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+AL+L N+M + + YTAL++ REG +AE++ ++ G++PD Y
Sbjct: 325 GDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTY 384
Query: 298 NALMEAY 304
++ +
Sbjct: 385 TMIINEF 391
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A+E+ +M ++ + YT +I+ + ++ A K+ EM S KP+ T
Sbjct: 324 EGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++ + A ++ ++Q G P V
Sbjct: 384 YTMIINEFCKKRDSKTASKLLREMQRDGPLPGV 416
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y +L++ C G +A + ++ + G+ ++YN+ + L K +++++
Sbjct: 447 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 506
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P TY ++I+ G+ K A+++F E+ S CKP+I +Y +L+N + G
Sbjct: 507 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGD 566
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F ++Q G+ PDV Y+ L+E + ++ M GC P+ +YNI
Sbjct: 567 VDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNI 626
Query: 324 MVDAYGRAG 332
++D RAG
Sbjct: 627 LLDCLERAG 635
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ + G +++A VF E+ P + YNS I+ L K G+ +A
Sbjct: 514 PDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMR 573
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ P TY+ +I +GK K MA LF+ M + C PNI TY L++ R
Sbjct: 574 FLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLER 633
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G E +++ +L+ G+ PD Y L
Sbjct: 634 AGRTAETVDLYAKLREQGLTPDSITYAIL 662
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+A+ S ++A V+ EM G YN +D L K ++ ++F+ M
Sbjct: 241 TYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDM 300
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K C P TYT+MI + GK ++ +L LF EM + C PN+ Y ++ A ++ G+
Sbjct: 301 KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMV 360
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
++A +F + P+ + Y+ ++ L++ +G
Sbjct: 361 DKAILLFCNMIKNNCRPNEFTYSIILNV--LVAEGQLG 396
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 43/250 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF------- 177
+I+A + + KA + ++ + C P E TY+++L G L + + V
Sbjct: 350 MIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFI 409
Query: 178 ---------REMRKYGLPPSA----------------VVYNSYIDGLLKGGNPQKAVEIF 212
R + K G A Y S ++ L +GG +A+E+
Sbjct: 410 NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELL 469
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
++ T Y +++ GK + L+ +M+ P+I TY L+++ R
Sbjct: 470 SKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRV 529
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY-RLISRMHMGCEPDRASY 321
G +EA E+FE+L+ + +PD+ +YN+L+ EA+ R + G PD +Y
Sbjct: 530 GKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTY 589
Query: 322 NIMVDAYGRA 331
+ +++ +G+
Sbjct: 590 STLIECFGKT 599
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
++ +M++ G P YN I L + G ++AVE+F+ ++ C+P +Y +IN G
Sbjct: 503 LYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLG 562
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K A F EM+ P++ TY+ L+ F + E A +F+++ G P++
Sbjct: 563 KNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIV 622
Query: 296 AYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
YN L++ R G PD +Y I+
Sbjct: 623 TYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAIL 662
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 15/236 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L KKWD + L + L++A+ + +A Y+E+ Y +LL A
Sbjct: 229 LIKKWD-LRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKD 287
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
L+++ VF++M+ P Y I K G ++++ +F+ M C P+ Y
Sbjct: 288 EQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAY 347
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
MI K+ A+ LF M + C+PN TY+ ++N EG +E+ E +
Sbjct: 348 NTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE-VSN 406
Query: 288 AGIEPDVYAYNALM--------EAYRLISRM---HMGCEPDRASYNIMVDAYGRAG 332
I +YAY EA+RL M H G DR +Y M+++ R G
Sbjct: 407 KFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDG--GDRDAYISMLESLCRGG 460
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + G+ K+A + EL S C P +Y L+ +G +++A F EM+
Sbjct: 521 ILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDK 580
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F RM C P+ TY ++++ +A ++
Sbjct: 581 GLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAET 640
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ ++R P+ TY L
Sbjct: 641 VDLYAKLREQGLTPDSITYAIL 662
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A +LE+ D P TY+ L++ + + +E A ++F M G
Sbjct: 557 LINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQG 616
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P+ V YN +D L + G + V+++ +++ P + TY ++ L +++ F
Sbjct: 617 CCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNRKF 673
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 27/181 (14%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T T +L+K + + LE + ++K+ L +A Y + ++ + +A ++
Sbjct: 206 TISTVNILIKIFSSNEDLELCTGL---IKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVY 262
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M Q Y ++++ K + + K+F +M+ C P+ TYT ++ +
Sbjct: 263 MEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKM 322
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
G EE+ +FE++ + GC P+ +YN M+ A ++G
Sbjct: 323 GRAEESLALFEEM------------------------LTKGCTPNLIAYNTMIQALSKSG 358
Query: 333 L 333
+
Sbjct: 359 M 359
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI +M RD + + T ++I ++ + L ++ + N TY L+ A
Sbjct: 193 EILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGL---IKKWDLRLNAYTYRCLLQAH 249
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRMHMG-CEPDR 318
R + A ++ ++ G + D++AYN L++A Y++ M + C PD
Sbjct: 250 IRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 309
Query: 319 ASYNIMVDAYGRAGLHE 335
+Y IM+ G+ G E
Sbjct: 310 YTYTIMIRMTGKMGRAE 326
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 14/226 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A + A + E+ C P TY ++ Y +G +E A ++FR M++ G
Sbjct: 202 LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 261
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMA 243
P AV YNS + + G ++ VE + M RD C TY MI++YGKA A
Sbjct: 262 FTPDAVTYNSVLHAFARDGRIEE-VERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKA 320
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L+ +M+ P+ T+T L++ + G EA +FE + + + P + A++A++ A
Sbjct: 321 EELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICA 380
Query: 304 YRLIS-----------RMHMGCEPDRASYNIMVDAYGRAGLHEGKC 338
Y + G PD +Y++M+D + +AG+ E KC
Sbjct: 381 YAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPE-KC 425
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 119 SCVSIL--LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK-AEA 175
+CV + L+ Y + + + D C P T+ +++KA G+ E A +
Sbjct: 123 NCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASS 182
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+ +++ GL P + YN+ I A+ IF+ M+R C P TY MI++YG
Sbjct: 183 LLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYG 242
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+A + A +F M+ P+ TY ++++AFAR+G EE E I ++ A D
Sbjct: 243 RAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEI 302
Query: 296 AYNALMEAYRLISRMHMGCE------------PDRASYNIMVDAYGRAGL 333
YN ++ Y + MH E PD ++ +++D G+AG
Sbjct: 303 TYNTMIHMYGK-AGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGF 351
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++EA+G+ K+ + L + P T+ ++ A+ +G LE+A +++R+M++ G
Sbjct: 722 VLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAG 781
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V+ + + + A E+ + +K+ + + Y MI+LY K A
Sbjct: 782 FSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAA 841
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M+ C P+ T+ L+ ++R + +EA+ + ++ G P++ Y L+ AY
Sbjct: 842 LVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAY 901
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLH 334
+ S GC+PD +YN+M++ Y +AG H
Sbjct: 902 GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEH 942
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+++ A+ + ++A Y ++ ++ P+ + LL Y + AE + ++++K
Sbjct: 755 VVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKK 814
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL +YN I K G+ + A +F+ M+ C P T+ +I LY +
Sbjct: 815 AGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQE 874
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L EM PNI TYT L++A+ R E+AE +F+ + G +PD AYN ++
Sbjct: 875 AQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMIN 934
Query: 303 AYR----------LISRMHM-GCEPDRASYNIMVDAYGRAG 332
YR +I +M + G EP + ++++D+YG+ G
Sbjct: 935 VYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGG 975
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + + +I +YG+ L + AE + +L Y+ LL AY +G E+A
Sbjct: 646 SAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALD 705
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
M GL P+A N ++ + G ++ E FQR+ P++ T+ ++ + + +
Sbjct: 706 NMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNG 765
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A ++ +M+ P+I + AL+ ++RE + +AEE+ + ++ AG+E D+ YN
Sbjct: 766 NLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYN 825
Query: 299 ALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGR 330
++ Y + +GC PD ++N ++ Y R
Sbjct: 826 HMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSR 868
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 90/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + ++ A + + + C P T+ L+ Y + ++++A+A+ REM K G
Sbjct: 827 MISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 886
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ Y + I + + A +F+ + C+P Y +MIN+Y KA +
Sbjct: 887 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 946
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +M+ +P++ T L++++ + G +AEE+ E L G+ PD Y +++ ++
Sbjct: 947 EIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSH 1006
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 85/158 (53%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D+RC E TY ++ Y +G+ KAE ++ +M++ G P +V + ID L K G
Sbjct: 294 DARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVN 353
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A +F+ M + +P+ + ++ MI Y KA A ++ M +P++ Y+ ++
Sbjct: 354 EAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVML 413
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F + G+ E+ +++ + G+G++P++ Y ++ +
Sbjct: 414 DVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVF 451
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ ++ +Y L + AE VFR+++++G + Y++ + + GN ++A M
Sbjct: 649 HVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMV 708
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP+ ++ +G+A K+ + F + PN T+ + +AF+R G E
Sbjct: 709 AAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLE 768
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
EA ++ Q++ AG P + + AL+ Y L+ + G E D YN M+
Sbjct: 769 EARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMI 828
Query: 326 DAYGRAG 332
Y + G
Sbjct: 829 SLYSKLG 835
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 199 LLKGGNPQKAVEIFQRMKR---DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
L + P A E+F R + +C Q Y ++++Y + +L M+ C
Sbjct: 101 LGRANQPGLAQELFDRAESSIGNCVQ----VYNSLMSVYARHGDWNSVQQLLCRMQDRGC 156
Query: 256 KPNICTYTALVNAFAREGLCEE-AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM---- 310
+P++ T+ ++ A R G+ E A + + + AG+ PD YN L+ A L +R+
Sbjct: 157 RPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAI 216
Query: 311 -------HMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
GC+PD +YN M+ YGRAG E S
Sbjct: 217 LIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 252
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ +H+KAE Y+++ + P T+ +L+ +G + +A A+F +M K
Sbjct: 307 MIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQ 366
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +++ I K A + M R +P Y++M++++ KA +
Sbjct: 367 VRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCI 426
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
L+ M KP + Y +V F ++ E E + +++
Sbjct: 427 ILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEM 467
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 30/208 (14%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AYG+ ++ AE + + ++ C P Y +++ Y +G K E + +M+ G
Sbjct: 897 LISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDG 956
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS + +D KGG KA E+ + + P YT +IN + A+
Sbjct: 957 FEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAV 1016
Query: 245 KLFNEMRSHKCKPNICTYT----------------ALVNAFAREG--------------L 274
+M +P T T L+ A + G +
Sbjct: 1017 IWLRKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKALSEAGFSLPLRLMTECTPKV 1076
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALME 302
++ ++IF+QLQ +G E N LM+
Sbjct: 1077 VQDMQDIFDQLQESGPEACQGVVNVLMD 1104
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S +LI+ G+ +A + ++L S+ PT ++ ++ AY + + AE +
Sbjct: 336 SVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYS 395
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
M + G+ P + Y+ +D K G P+K + +++ M +P Y +M+ ++ + S
Sbjct: 396 CMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKS 455
Query: 239 KSFMALKLFNEM 250
L EM
Sbjct: 456 SVAEIENLSKEM 467
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
PN +++ R A+E+F++ + + I V YN+LM Y +L
Sbjct: 89 PNPRMLAVMLSVLGRANQPGLAQELFDRAESS-IGNCVQVYNSLMSVYARHGDWNSVQQL 147
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+ RM GC PD ++NI++ A R G+ EG S L ++
Sbjct: 148 LCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDV 187
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y +L++ C G +A + ++ + G+ ++YN+ + L K +++++
Sbjct: 442 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 501
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P TY ++I+ G+ K A+++F E+ S CKP+I +Y +L+N + G
Sbjct: 502 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGD 561
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F ++Q G+ PDV Y+ L+E + ++ M GC P+ +YNI
Sbjct: 562 VDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNI 621
Query: 324 MVDAYGRAG 332
++D RAG
Sbjct: 622 LLDCLERAG 630
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ + G +++A VF E+ P + YNS I+ L K G+ +A F M
Sbjct: 513 TYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEM 572
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P TY+ +I +GK K MA LF+ M + C PNI TY L++ R G
Sbjct: 573 QDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRT 632
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNAL 300
E +++ +L+ G+ PD Y L
Sbjct: 633 AETVDLYAKLREQGLTPDSITYAIL 657
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+A+ S ++A V+ EM G YN +D L K ++ ++F+ M
Sbjct: 236 TYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDM 295
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K C P TYT+MI + GK ++ +L LF EM + C PN+ Y ++ A ++ G+
Sbjct: 296 KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMV 355
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
++A +F + P+ + Y+ ++ L++ +G
Sbjct: 356 DKAILLFCNMIKNNCRPNEFTYSIILNV--LVAEGQLG 391
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 43/250 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF------- 177
+I+A + + KA + ++ + C P E TY+++L G L + + V
Sbjct: 345 MIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFI 404
Query: 178 ---------REMRKYGLPPSA----------------VVYNSYIDGLLKGGNPQKAVEIF 212
R + K G A Y S ++ L +GG +A+E+
Sbjct: 405 NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELL 464
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
++ T Y +++ GK + L+ +M+ P+I TY L+++ R
Sbjct: 465 SKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRV 524
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY-RLISRMHMGCEPDRASY 321
G +EA E+FE+L+ + +PD+ +YN+L+ EA+ R + G PD +Y
Sbjct: 525 GKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTY 584
Query: 322 NIMVDAYGRA 331
+ +++ +G+
Sbjct: 585 STLIECFGKT 594
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
++ +M++ G P YN I L + G ++AVE+F+ ++ C+P +Y +IN G
Sbjct: 498 LYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLG 557
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K A F EM+ P++ TY+ L+ F + E A +F+++ G P++
Sbjct: 558 KNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIV 617
Query: 296 AYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
YN L++ R G PD +Y I+
Sbjct: 618 TYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAIL 657
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 15/236 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L KKWD + L + L++A+ + +A Y+E+ + Y +LL A
Sbjct: 224 LIKKWD-LRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKD 282
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
L+++ VF++M+ P Y I K G ++++ +F+ M C P+ Y
Sbjct: 283 EQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAY 342
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
MI K+ A+ LF M + C+PN TY+ ++N EG +E+ E +
Sbjct: 343 NTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE-VSN 401
Query: 288 AGIEPDVYAYNALM--------EAYRLISRM---HMGCEPDRASYNIMVDAYGRAG 332
I +YAY EA+RL M H G DR +Y M+++ R G
Sbjct: 402 KFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDG--GDRDAYISMLESLCRGG 455
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + G+ K+A + EL S C P +Y L+ +G +++A F EM+
Sbjct: 516 ILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDK 575
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F RM C P+ TY ++++ +A ++
Sbjct: 576 GLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAET 635
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ ++R P+ TY L
Sbjct: 636 VDLYAKLREQGLTPDSITYAIL 657
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A +LE+ D P TY+ L++ + + +E A ++F M G
Sbjct: 552 LINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQG 611
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P+ V YN +D L + G + V+++ +++ P + TY ++ L +++ F
Sbjct: 612 CCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNRKF 668
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 27/181 (14%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T T +L+K + + LE + ++K+ L +A Y + ++ + +A ++
Sbjct: 201 TISTVNILIKIFSSNEDLELCTGL---IKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVY 257
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M + Q Y ++++ K + + K+F +M+ C P+ TYT ++ +
Sbjct: 258 MEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKM 317
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
G EE+ +FE++ + GC P+ +YN M+ A ++G
Sbjct: 318 GRAEESLALFEEM------------------------LTKGCTPNLIAYNTMIQALSKSG 353
Query: 333 L 333
+
Sbjct: 354 M 354
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EI +M RD + + T ++I ++ + L ++ + N TY L+ A
Sbjct: 188 EILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGL---IKKWDLRLNAYTYRCLLQAH 244
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRMHMG-CEPDR 318
R + A ++ ++ G + D++AYN L++A Y++ M + C PD
Sbjct: 245 IRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 304
Query: 319 ASYNIMVDAYGRAGLHE 335
+Y IM+ G+ G E
Sbjct: 305 YTYTIMIRMTGKMGRAE 321
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L++ +C G + A++VF + K+GL PS V +N+ I+G +K G+ + + M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K K A +LFNEM + PN T+T L++ + +
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ G+ PD+ YN L+ + + LI M M G +PD+ SY ++
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGSCKEG 325
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-------RLNKKW-----DPIVL 117
+R Q D+ T W L P+ +++ LIN ++L RL P V
Sbjct: 152 MRLAQSVFDAITKW----GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVY 207
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+ LI ++ +A + E+LD+ +P T+ L+ +C + ++ A ++
Sbjct: 208 TYSI---LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIY 264
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
++M GL P + YN+ I GL K G ++ ++ M + +P +YT +I+ K
Sbjct: 265 KQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKE 324
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+AL+L N+M + + YTAL++ REG +AE++ ++ G++PD Y
Sbjct: 325 GDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTY 384
Query: 298 NALMEAY 304
++ +
Sbjct: 385 TMIINEF 391
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A+E+ +M ++ + YT +I+ + ++ A K+ EM S KP+ T
Sbjct: 324 EGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++ + A ++ ++Q G P V
Sbjct: 384 YTMIINEFCKKRDSKTASKLLREMQRDGPVPGV 416
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY ++ C G A + R+M + + P+ V+Y++ IDGL K G A
Sbjct: 210 PNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQN 269
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M+ P+ TY MIN + + + A +L EM K P++ T++ L+NA
Sbjct: 270 LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALV 329
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
+EG EAEE++ ++ GI P+ YN++++ + +R+ GC PD
Sbjct: 330 KEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVI 389
Query: 320 SYNIMVDAY 328
+++I++D Y
Sbjct: 390 TFSILIDGY 398
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 26/237 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + +A+ E+ + + P T+++L+ A G +AE ++ EM G
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG 348
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YNS IDG K A +F M C P T++++I+ Y A + +
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
KL +EM N TYT L++ F + G A ++ +++ +G+ P+V N L
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468
Query: 301 ---------MEAYRLISRMHM---------GCEPDRASYNIMVDAYGRAGLHEGKCS 339
+E ++++ + M EPD +YNI++ ++EGK S
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL----INEGKFS 521
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
SR P Y+ ++ G A+ +F EM++ G+ P+ YN I+G G +
Sbjct: 242 SRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSE 301
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A + + M P T++++IN K K F A +L+NEM PN TY ++++
Sbjct: 302 AQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMID 361
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+++ + AE +F + G PDV ++ L++ Y
Sbjct: 362 GFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGY 398
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 25/240 (10%)
Query: 110 KKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
+K P V+ V LI A ++ +AE Y E+L IP TY ++ +
Sbjct: 312 RKMSPDVVTFSV---LINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ AE +F M G P + ++ IDG +++ M R +T TYT
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA- 288
+I+ + + AL L EM S PN+ T L++ G ++A E+F+ +Q +
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488
Query: 289 ----------GIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
+EPDV YN L+ EA L M H G PD +YN ++D
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ G +AE ++ EM GL P + YNS IDGL K +A ++
Sbjct: 502 PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQM 561
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P T+T +IN Y K + L++F EM N TY L++ F +
Sbjct: 562 FDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G A +IF+++ +G+ PD ++
Sbjct: 622 VGNINGALDIFQEMISSGVYPDTITIRNML 651
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 91 PTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI--------LLIEAY-GQKSLHKKAEF 140
P T++ +I+ S Q RL+ LM+ +LI+ Y G K + +
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKL 410
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ E+ + TY L+ +C G L A + +EM G+ P+ V N+ +DGL
Sbjct: 411 LH-EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469
Query: 201 KGGNPQKAVEIFQRMKR-----------DCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
G + A+E+F+ M++ + +P +TY ++I K A +L+ E
Sbjct: 470 NNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEE 529
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M P+ TY ++++ ++ +EA ++F+ + G PDV + L+ Y + R
Sbjct: 530 MPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR 589
Query: 310 MHMGCE 315
+ G E
Sbjct: 590 VGDGLE 595
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 86/180 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + A+ + E+ + P TY ++ +C SG +A+ + REM +
Sbjct: 254 IIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK 313
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V ++ I+ L+K G +A E++ M P+T TY MI+ + K ++ A
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAE 373
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F M + C P++ T++ L++ + ++ ++ ++ G+ + Y L+ +
Sbjct: 374 RMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGF 433
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + Q A E++ S P T LL C +G L+ A +F+ M+K
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488
Query: 185 L-----------PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ P YN I GL+ G +A E+++ M P T TY +I+
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K S+ A ++F+ M S P++ T+T L+N + + G + E+F ++ GI +
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608
Query: 294 VYAYNALMEAY 304
Y L+ +
Sbjct: 609 AITYRTLIHGF 619
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE Y E+ +P TY ++ C L++A +F M G P V + + I
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+G K G +E+F M R + TY +I+ + + AL +F EM S
Sbjct: 582 NGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVY 641
Query: 257 PNICTYTALVNAF 269
P+ T ++
Sbjct: 642 PDTITIRNMLTGL 654
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 60/213 (28%)
Query: 133 SLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
SLH+K E R IP ++ +L+K +C L A + F ++ K G PS V
Sbjct: 97 SLHRKMEM--------RRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVT 148
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
+++ + GL +A+ F ++
Sbjct: 149 FSTLLHGLCVEDRVSEALHFFHQI------------------------------------ 172
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME--------- 302
CKPN+ +T L+N REG EA + +++ G++P+ Y +++
Sbjct: 173 ---CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229
Query: 303 -AYRLISRMH--MGCEPDRASYNIMVDAYGRAG 332
A L+ +M +P+ Y+ ++D + G
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDG 262
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q+ ++A + +++ R P TY L+ C + +E A +F+EM G P+ V
Sbjct: 56 QEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV 115
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YN+ IDG K + A ++F +M R C P+ TYT +I+ K+ K A ++ + M
Sbjct: 116 SYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 175
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
PN+ TY+ L++ F + +EA ++ EQ+ GI P V YN L+
Sbjct: 176 VKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKL 235
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMVDA 327
+A++L M C P +YN ++ A
Sbjct: 236 EDAFKLFRGMAQRRCHPTVVTYNTLLRA 263
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PTE +Y L+ +C L A+ VF +M + P+ V Y + IDGL K G Q A E
Sbjct: 111 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAE 170
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M + P+ TY+ +I+ + K + A KL +M + P + TY L+N+
Sbjct: 171 VLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC 230
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRM-HMGCEPDRA 319
R E+A ++F + P V YN L+ A +RL + M GC PD
Sbjct: 231 RADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAI 290
Query: 320 SYNIMVDAYGRAG-LHEGK 337
+Y+ + RAG +HE +
Sbjct: 291 TYDTLAWGLTRAGKVHEAQ 309
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+E + +R I P Y +L C +E+A +F +M K + P+ V YN+ I+GL K
Sbjct: 32 VEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCK 91
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A E+F+ M P+ +Y +I+ + K A +F++M C PN+ T
Sbjct: 92 AWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVT 151
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
YT L++ ++ G + A E+ + + G+ P+V Y+ L+ EA++L+ +M
Sbjct: 152 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 211
Query: 311 HMGCEPDRASYNIMVDAYGRA 331
G P +YNI++++ RA
Sbjct: 212 TQGIAPTVVTYNILLNSLCRA 232
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A+ + +++ S C+P TY L+ SG ++ A V M K G
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y+ IDG K +A ++ ++M P+ TY +++N +A K A
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 239
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLF M +C P + TY L+ A + A ++ ++ G PD Y+ L
Sbjct: 240 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 299
Query: 305 RLISRMH 311
++H
Sbjct: 300 TRAGKVH 306
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 18/220 (8%)
Query: 72 FVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVS-----ILLI 126
+V EV NT+ D F DL+ +D +V +CV LI
Sbjct: 110 YVPTEVSYNTLIDGF-------CKKKDLVAA------KDVFDKMVRSNCVPNVVTYTTLI 156
Query: 127 EAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
+ + + A ++ P TY+ L+ +C +++A + +M G+
Sbjct: 157 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 216
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ V YN ++ L + + A ++F+ M + C P+ TY ++ + A +L
Sbjct: 217 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 276
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ EM + C P+ TY L R G EA+E+ E+++
Sbjct: 277 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M +Y PP A+ Y ++ L K A+ + M +P Y +++ + K
Sbjct: 1 MARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK 59
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A LF +M + PN+ TY L+N + E A E+F+++ G G P +YN
Sbjct: 60 VEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 119
Query: 300 LMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ + + +M C P+ +Y ++D ++G
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 163
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +LL + C + LE A +FR M + P+ V YN+ + L A +
Sbjct: 217 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 276
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ M C P TY + +A K A +L +M+ K P
Sbjct: 277 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGG 203
+L+ P + TY ++ C G A + R+M + + P+ V+YN+ IDGL K G
Sbjct: 208 MLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDG 267
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +F M+ P TY MIN + + + A +L EM K P++ T++
Sbjct: 268 RHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFS 327
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM------- 312
AL+NAF +EG EAEE+++++ I P Y+++++ + RL + HM
Sbjct: 328 ALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTK 387
Query: 313 GCEPDRASYNIMVDAYGRA 331
GC PD ++N ++ Y RA
Sbjct: 388 GCSPDIITFNTLIAGYCRA 406
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 26/254 (10%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W D + +Q L +K +P V+ LI A+ ++ +AE Y E+L IP+
Sbjct: 304 WSDAEQL-LQEMLERKINPDVVTFSA---LINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ ++ +C L+ AE +F G P + +N+ I G + +++ M
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+T TYT +I+ + + A L EM S PN+ T L++ G
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479
Query: 276 EEAEEIFEQLQGA-----------GIEPDVYAYNAL----------MEAYRLISRM-HMG 313
++A E+F+ +Q + G+EPDV YN L +EA L M H G
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 314 CEPDRASYNIMVDA 327
PD +Y+ M+D
Sbjct: 540 IVPDTITYSSMIDG 553
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 26/250 (10%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
D N+ ++++ + + IV +C +I + AE E+L+ + P T+
Sbjct: 271 DAHNLFIEMQEKEIFPDIVTYNC----MINGFCISGRWSDAEQLLQEMLERKINPDVVTF 326
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+ L+ A+ G +AE ++ EM + PS V Y+S IDG K A +F
Sbjct: 327 SALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPT 386
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
C P T+ +I Y +A + +KL +EM N TYT L++ F + G
Sbjct: 387 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 446
Query: 278 AEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHM---------GCE 315
A+++ +++ +G+ P+V N L +E ++ + + M G E
Sbjct: 447 AQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVE 506
Query: 316 PDRASYNIMV 325
PD +YNI++
Sbjct: 507 PDVQTYNILI 516
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + H A ++E+ + P TY ++ +C+SG AE + +EM +
Sbjct: 259 IIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK 318
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +++ I+ +K G +A E++ M PST TY+ MI+ + K ++ A
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F + C P+I T+ L+ + R ++ ++ ++ AG+ + Y L+ +
Sbjct: 379 HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 438
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY- 183
LI + Q A+ E++ S P T LL C +G L+ A +F+ M+K
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 184 ----------GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
G+ P YN I GL+ G +A E+++ M P T TY+ MI+
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K S+ A ++F+ M S P++ T+ L+ + + G+ ++ E+F ++ GI D
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613
Query: 294 VYAYNALMEAYRLISRM 310
Y L+ +R + +
Sbjct: 614 AITYITLIYGFRKVDNI 630
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ G +AE ++ EM G+ P + Y+S IDGL K +A ++
Sbjct: 507 PDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P T+ +I Y KA L+LF EM + TY L+ F +
Sbjct: 567 FDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRK 626
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ A +IF+++ +G+ PD ++
Sbjct: 627 VDNIDGALDIFQEMISSGVYPDTITIRNML 656
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 58/214 (27%)
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
SLHKK +E+L C ++ +L+K +C L A + F ++ K G P+ V +
Sbjct: 102 SLHKK-----MEMLRMPC--NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTF 154
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N+ + GL C + AL LF++M
Sbjct: 155 NTLLHGL-------------------CVEDRISE----------------ALDLFHQM-- 177
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME---------- 302
CKPN+ T+T L+N REG EA + +++ G++P+ Y +++
Sbjct: 178 --CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVS 235
Query: 303 AYRLISRMHMGCE--PDRASYNIMVDAYGRAGLH 334
A L+ +M P+ YN ++D + G H
Sbjct: 236 ALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRH 269
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE Y E+ +P TY+ ++ C L++A +F M P V +N+ I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G K G +E+F M + TY +I + K AL +F EM S
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
P+ T ++ + E A + E LQ
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y LL A+C ++KA A M G P V YN+ + L + G A+
Sbjct: 117 CTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 176
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++K C P +Y +I+ KA K+ AL+L +EM S +P+I TYT + +
Sbjct: 177 DLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGL 236
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
RE EEA F ++Q GI P V YNA++ A L S M GC P+
Sbjct: 237 CREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNE 296
Query: 319 ASYNIMVDAYGRAGL 333
++Y I+V+ GL
Sbjct: 297 STYTILVEGLAYEGL 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ D C P TY ++L C G ++ A + YG P+ V YN + GL
Sbjct: 6 EMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAE 65
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A ++ + M C P+ T+ ++I+ + A+++ ++ + C PN +Y
Sbjct: 66 RWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYN 125
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM---- 312
L++AF ++ ++A E + G PD+ +YN L+ A I +H
Sbjct: 126 PLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGK 185
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC P SYN ++D +AG
Sbjct: 186 GCSPVLISYNTVIDGLTKAG 205
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ A+ ++ KA ++EL+ SR C P +Y LL A C +G ++ A + +++
Sbjct: 127 LLHAFCKQKKMDKA-MAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGK 185
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM------------- 230
G P + YN+ IDGL K G ++A+E+ M QP TYT +
Sbjct: 186 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEA 245
Query: 231 ---------------INLYG-------KASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ LY K ++ A+ LF+ M S+ C PN TYT LV
Sbjct: 246 IRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEG 305
Query: 269 FAREGLCEEAEEIFEQLQGAGI 290
A EGL +EA ++ QL G+
Sbjct: 306 LAYEGLVKEARDLLGQLCSRGV 327
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+KL +EMR C P+I TY ++N +EG ++A E E L G EP+ +YN ++
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A +L+ M H GC P+ ++N+++ R GL E
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVE 103
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+++ M+ C P TY +++N + + A++ + S+ +PN +Y ++
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCE 315
E+AE++ E++ G P+V +N L ME I + GC
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPK--YGCT 118
Query: 316 PDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
P+ SYN ++ A+ + + ++ + +S YP
Sbjct: 119 PNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYP 154
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+ +C + A ++ +M + G P V YN+ ID L K A +
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ ++R +P+ TYT ++N +S+ A +L ++M K PN+ TY+AL++AF +
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
G EA+E+FE++ I+PD+ Y++L+ L R+ GC D S
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 321 YNIMVDAYGRA 331
YN +++ + +A
Sbjct: 333 YNTLINGFCKA 343
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P TY+ LL A+ +G + +A+ +F EM + + P V Y+S I+GL
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F M C +Y +IN + KA + +KLF EM N TY
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L+ F + G ++A+E F Q+ GI PD++ YN L+
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ + C + + A F+E+ + G+ P+ V Y + ++GL A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + P+ TY+ +++ + K K A +LF EM P+I TY++L+N
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+EA ++F+ + G DV +YN L+ + +L M G + +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 321 YNIMVDAYGRAG 332
YN ++ + +AG
Sbjct: 368 YNTLIQGFFQAG 379
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ + +A+ + E++ P TY+ L+ C+ +++A +F M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN+ I+G K + +++F+ M + +T TY +I + +A A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F++M P+I TY L+ G E+A IFE +Q ++ D+ Y ++
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG-LHEGKCSYS 341
EA+ L + + G +PD +Y M+ G LHE + Y+
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 88 SLPPTHATWDDLIN-VSVQLRL---NKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKA 138
S+ P T+ LIN + + R+ N+ +D +V C++ + LI + + +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ E+ + TY L++ + +G ++KA+ F +M +G+ P YN + G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G +KA+ IF+ M++ TYT +I K K A LF + KP+
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I TYT +++ +GL E E ++ +++ G+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 102/189 (53%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y +L++ C +G +A + ++ + + V+YN+ + L K +++++
Sbjct: 250 DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 309
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P +Y ++I+ +G+A + A+K+F E+ + CKP+I ++ +L+N + G
Sbjct: 310 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 369
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F++++ G+ PDV Y+ L+E + ++ M GC P+ +YNI
Sbjct: 370 IDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 429
Query: 324 MVDAYGRAG 332
++D R+G
Sbjct: 430 LLDCLERSG 438
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 152 PTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P+ D +Y +L+ ++ +G +E+A +F E+ P + +NS I+ L K G+ +A
Sbjct: 315 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAH 374
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ M+ + P TY+ +I +GK K MA +LF+EM + C PNI TY L++
Sbjct: 375 MRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCL 434
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EA +++ +L+ G+ PD Y L
Sbjct: 435 ERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 465
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+A+ S KA V+ E+R+ G YN +D L K + +F+ M
Sbjct: 44 TYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDM 103
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR C+P TYT+MI + GK K+ +L LF EM PN+ Y ++ A A +
Sbjct: 104 KRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMV 163
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
++ +F ++ P+ + ++ ++ L++ +G
Sbjct: 164 DKTIFLFSKMVENNCRPNGFTFSVILNV--LVAEGQLG 199
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 109/257 (42%), Gaps = 43/257 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF------- 177
+I+A + K F + +++++ C P T++++L G L + + V
Sbjct: 153 MIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFM 212
Query: 178 ---------REMRKYGLPPSAV----------------VYNSYIDGLLKGGNPQKAVEIF 212
R + K G A Y S ++ L G +A+++
Sbjct: 213 NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 272
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
++ T Y +++ GK K+ L+ +M+ P+I +Y L+++F R
Sbjct: 273 SKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRA 332
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G EEA +IFE+L+ + +PD+ ++N+L+ EA+ M G PD +Y
Sbjct: 333 GRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTY 392
Query: 322 NIMVDAYGRAGLHEGKC 338
+ +++ +G+ E C
Sbjct: 393 STLIECFGKTDKVEMAC 409
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 43/252 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + + + ++ C P E TY ++++ G +++ +F+EM +
Sbjct: 82 MLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEK 141
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---------- 233
G P+ + YN+ I L K + +F +M + C+P+ T+++++N+
Sbjct: 142 GYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRL 201
Query: 234 --YGKASKSFM--------------------ALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ S FM A +LF M S + + Y +++ +
Sbjct: 202 DEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCD 261
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRMHM-GCEPDRAS 320
G EA ++ ++ I D YN ++ A + L +M G PD S
Sbjct: 262 AGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFS 321
Query: 321 YNIMVDAYGRAG 332
YNI++ ++GRAG
Sbjct: 322 YNILISSFGRAG 333
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ ++A + EL +S C P ++ L+ +G +++A F+EMR+
Sbjct: 324 ILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREE 383
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F M + C P+ TY ++++ ++ ++ A
Sbjct: 384 GLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEA 443
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +++ P+ TY L
Sbjct: 444 VDLYAKLKQQGLTPDSITYAVL 465
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
E F ++K+ L + Y + L+ N KA E++ ++R + Y ++++
Sbjct: 26 VERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLD 85
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
K +K +F +M+ C+P+ TYT ++ + G +E+ +F+++ G P
Sbjct: 86 ALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTP 145
Query: 293 DVYAYNALMEAYR----------LISRM-HMGCEPDRASYNIMVDA 327
++ AYN +++A L S+M C P+ +++++++
Sbjct: 146 NLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNV 191
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 13/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ IEA ++AE + +++ C P TY +++ +C G + A V R M K
Sbjct: 286 MFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA 345
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ +Y +DG +K ++A+E++QR+ +D PST TY +IN K K A
Sbjct: 346 AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEA 405
Query: 244 LKLFNEM--RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L+L EM R + +P+I TY+ +++ + G+ E A ++ ++ G+ PD + Y +L+
Sbjct: 406 LELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLI 465
Query: 302 E----------AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+ A L+ M G PD +Y +V R+
Sbjct: 466 QTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 506
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +++ S+C PT TY +L+ C + +E+A VF EM + G P + Y+S IDGL K
Sbjct: 129 YEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSK 188
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A ++ M P+ YT ++ K + A+K EMR + +P + T
Sbjct: 189 AGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDT 248
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------M 310
Y+ +V + G EEA + E++ PD +Y +EA I R +
Sbjct: 249 YSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMV 308
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
GC+PD +Y I++D + + G
Sbjct: 309 EKGCKPDMHTYGIIIDNFCKEG 330
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
DTY+ ++ Y G +E+A AV EM P + Y +I+ L G ++A ++F+
Sbjct: 247 DTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET 306
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M C+P TY ++I+ + K A + M KPN YT +++ F +
Sbjct: 307 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 366
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDRASY 321
EEA E+++++ GI P YN + +E R + R EP +Y
Sbjct: 367 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 426
Query: 322 NIMVDAYGRAGLHE 335
++++ G+ G+ E
Sbjct: 427 SMIIHGLGKVGMEE 440
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGL-------PPSAVVYNSYIDGLLKGGNPQKA 208
T+ ++L A C L+KA + F + P +V Y + +DGL K GN
Sbjct: 66 THGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAG 125
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+E +++M C+P+ TYT++++ KA K A +F EM KP+I Y++L++
Sbjct: 126 LEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDG 185
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++ G +EA ++ + + G P AY +++
Sbjct: 186 LSKAGRVDEARKLVDLMIARGPPPTAVAYTSIV 218
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P ++ +LL+ + E A+ REM+ G+ + + + L + KAV
Sbjct: 27 PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86
Query: 212 FQRMKRDCCQ-------PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
F + C+ P + TYT +++ KA L+ + +M + KC+P + TYT
Sbjct: 87 FNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTV 146
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
LV+ + E A ++FE++ G +PD+ AY++L+ EA +L+ M G
Sbjct: 147 LVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARG 206
Query: 314 CEPDRASYNIMVDAYGRAG 332
P +Y +V + G
Sbjct: 207 PPPTAVAYTSIVAGLCKCG 225
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 29/168 (17%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
NS + L++GG A+ FQ +P+ ++ +++ + + L EM++
Sbjct: 1 NSLLLALVRGGQLSDALGFFQS---SISEPNVSSFNILLRGFAARDDFEVVNALLREMKA 57
Query: 253 HKCKPNICTYTALVNAF-AREGL----------CEEAEEIFEQLQGAGIEPDVYAYNALM 301
N T+ +++A AR L EEA +FE ++ PD Y A++
Sbjct: 58 RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEA----PDSVTYTAIV 113
Query: 302 EAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEGKC 338
+ G CEP +Y ++VD +A E C
Sbjct: 114 DGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERAC 161
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y ++ K+A + ++L P TY L C G ++ A + EM + G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + YNS ++GL K GN +AV++ + M+ P TYT +++ Y K+ + A
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +M + +P + T+ L+N F G+ E+ E++ + + GI P+ YN+L++ Y
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRA 331
+ + M G PD +YNI++ + +A
Sbjct: 614 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 651
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
ILL+ G+ + +AE E++ P Y L+ +C G + A +F EM+K
Sbjct: 330 ILLLCKTGKVA---EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P + Y + I GL + G +A ++F M +P TYT +I+ Y K K
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A L N+M PNI TYTAL + + G + A E+ ++ G+E ++Y YN+L+
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
+A +L+ M + G PD +Y ++DAY ++
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 546
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ C +G + +AE V REM G+ P V+Y + IDG K GN A +
Sbjct: 321 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 380
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M++ P TYT +I + + A KLF+EM + +P+ TYTAL++ + +
Sbjct: 381 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 440
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
EG +EA + Q+ G+ P++ Y AL + A L+ M G E + +
Sbjct: 441 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 500
Query: 321 YNIMVDAYGRAG 332
YN +V+ +AG
Sbjct: 501 YNSLVNGLCKAG 512
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
CIP +Y+ ++ YC G L++ + EM+ GL P+ YN I L K G +A
Sbjct: 284 CIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAE 343
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + M + P YT +I+ + K A +LF+EM+ K P+ TYTA++
Sbjct: 344 RVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGL 403
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ G EA+++F ++ +EPD Y AL+ EA+ L ++M MG P+
Sbjct: 404 CQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463
Query: 319 ASYNIMVDAYGRAG 332
+Y + D + G
Sbjct: 464 VTYTALADGLCKCG 477
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + E++ R P E TY L+ YC G +++A ++ +M + GL P+ V Y +
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K G A E+ M R + + TY ++N KA A+KL +M
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P+ TYT L++A+ + A E+ Q+ ++P V +N LM + +L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590
Query: 307 ISRM-HMGCEPDRASYNIMVDAY-------GRAGLHEGKCSYSLV 343
+ M G P+ +YN ++ Y ++ G C+ +V
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 635
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + +A ++LD PT T+ +L+ +CMSG+LE E + + M + G
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A YNS I N + EI++ M P TY ++I + KA A
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
L +M + +Y AL+ F + EA E+FEQ++ G+ D YN
Sbjct: 659 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y ++ + C G + +A + +M G P + Y++ I+G + G Q+ +++ + M
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ +P+ TY +I L K K A ++ EM S P+ YT L++ F + G
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRMHMG-CEPDRASYNIM 324
A +F+++Q I PD Y A +MEA +L M EPD +Y +
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 325 VDAYGRAG 332
+D Y + G
Sbjct: 435 IDGYCKEG 442
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK-AVEIFQR 214
+ + + +G+L++A +F +M YGL S N +I L + + K A+++F
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+T +Y ++ + + + A +L +M C P++ +Y+ ++N + + G
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNI 323
+ ++ E++Q G++P+ Y YN ++ EA R++ M G PD Y
Sbjct: 304 LQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363
Query: 324 MVDAYGRAG 332
++D + + G
Sbjct: 364 LIDGFCKLG 372
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 15/202 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ AYC S + +A + R+M L P+ V +N ++G G + ++
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P+ TY +I Y + +++ M + P+ TY L+ +
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRMHM-GCEPDRAS 320
+EA + + G G V +YNAL +EA L +M G DR
Sbjct: 651 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710
Query: 321 YNIMVDAYGRAGLHEGKCSYSL 342
YNI D EGK +L
Sbjct: 711 YNIFAD----INYDEGKMELTL 728
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 11/171 (6%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A VF E + G+ + YN L + G +A ++ +M+ C P +Y+ +IN
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y + + LKL EM+ KPN TY ++ + G EAE + ++ GI P
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356
Query: 293 DVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
D Y L++ AYRL M PD +Y ++ + G
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTG 407
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L+++ P V+ V L+ + + + E +L+ +P TY L+K YC+
Sbjct: 560 LDRELQPTVVTFNV---LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
+ ++R M G+ P YN I G K N ++A + + M + +Y
Sbjct: 617 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 676
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG-------LCEEAEE 280
+I + K K A +LF +MR + Y + EG LC+EA E
Sbjct: 677 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 736
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 136 KKAEFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
K+AE L ++++ C P TY +L C SG A + R+M + + AV Y+
Sbjct: 306 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 365
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
IDGL K G+ A +F M+ + TY ++I + A + KL +M
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------- 304
K PN+ T++ L+++F +EG EAEE+ +++ GI PD Y +L++ +
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485
Query: 305 -RLISRM-HMGCEPDRASYNIMVDAYGRA 331
+++ M GC+P+ ++NI+++ Y +A
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKA 514
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 15/248 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WDD + ++ + +K +P V+ V LI+++ ++ ++AE + E++ P
Sbjct: 412 WDDGAKL-LRDMIKRKINPNVVTFSV---LIDSFVKEGKLREAEELHKEMIHRGIAPDTI 467
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C L+KA + M G P+ +N I+G K +E+F++M
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 527
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
T TY +I + + K +A +LF EM S K PNI TY L++ G
Sbjct: 528 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 587
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
E+A EIFE+++ + +E D+ YN ++ +A+ L + + G +P +YNIM
Sbjct: 588 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 647
Query: 325 VDAYGRAG 332
+ + G
Sbjct: 648 IGGLCKKG 655
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ +C G L A+ +F+EM +PP+ V Y +DGL G +KA+EIF+++
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ + Y ++I+ ASK A LF + KP + TY ++ ++G
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EAE +F +++ G PD + YN L+ A+
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAH 686
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C +G + + R+M K + P+ V ++ ID +K G ++A E+ + M
Sbjct: 398 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 457
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P T TYT +I+ + K + A ++ + M S C PNI T+ L+N + +
Sbjct: 458 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 517
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
++ E+F ++ G+ D YN L++ + + ++++ E P+ +Y I+
Sbjct: 518 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 577
Query: 325 VDAYGRAGLHE 335
+D G E
Sbjct: 578 LDGLCDNGESE 588
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y++++ C G L+ A +F EM G+ + + YN I G G ++ + M
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P+ T++++I+ + K K A +L EM P+ TYT+L++ F +E +
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMV 325
+A ++ + + G +P++ +N L+ Y +R+ G E D +YN ++
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Query: 326 DAYGRAG 332
+ G
Sbjct: 544 QGFCELG 550
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ L+ C+ G + +A + M + G P + N+ ++GL G +A+ +
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M CQP+ TY ++N+ K+ ++ +A++L +M K + Y+ +++ +
Sbjct: 314 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
G + A +F +++ GI ++ YN L+ + R G + P+ +
Sbjct: 374 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 433
Query: 321 YNIMVDAYGRAG 332
+++++D++ + G
Sbjct: 434 FSVLIDSFVKEG 445
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++++ +C L A + ++ K G P+ + +++ I+GL G +A+E+ RM
Sbjct: 223 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 282
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P T ++N + K A+ L ++M + C+PN TY ++N + G
Sbjct: 283 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 342
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIM 324
A E+ +++ I+ D Y+ +++ A+ L + M M G + +YNI+
Sbjct: 343 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 402
Query: 325 VDAYGRAG 332
+ + AG
Sbjct: 403 IGGFCNAG 410
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ A +FR+M P+ + ++ + K + + ++M+ + T ++M
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
IN + + K +A ++ +PN T++ L+N EG EA E+ +++ G
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+PD+ N L+ EA LI +M GC+P+ +Y +++ ++G
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 340
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C G L +AE +FR+M + G P YN I L G+ K+V++
Sbjct: 639 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 698
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ +KR T ++I++ ++ +
Sbjct: 699 IEELKRCGFSVDASTIKMVIDMLSDDKANYFS 730
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + + Y ++L R P T+ LL A +G LE A A+F EM
Sbjct: 274 VIDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHL 333
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN++ID + K GN + A+++ M+ +P+ TY+ +I+ Y K K A
Sbjct: 334 GIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEA 393
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LKL+ +M+S + + Y ++ + + G E + ++++ +GIE D YN+L+
Sbjct: 394 LKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLING 453
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLH 334
Y R+ + G P +Y+ ++D Y +AG+H
Sbjct: 454 YGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMH 495
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRD 218
L+ AY SGL+ +A V M+ GL P+ V YN+ ID KGG + + + F++M RD
Sbjct: 239 LISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLRD 298
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
P +T+ +++ +A A LF+EM +I TY ++A + G E A
Sbjct: 299 RLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELA 358
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDA 327
++ ++ ++P+V Y+ L++ Y +L +M +G + DR YN ++
Sbjct: 359 MQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAI 418
Query: 328 YGRAG 332
Y +AG
Sbjct: 419 YVKAG 423
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ Y ++A ++ +M+ G+ V YN+ + +K G + +
Sbjct: 372 PNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIV 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ + T TY +IN YGK + + L +MR P++ TY+ L++ +++
Sbjct: 432 CDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSK 491
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVY---------AYNALME-AYRLISRM-HMGCEPDRAS 320
G+ +A ++ + +G++PDV A N L+E A L++ M MG +P+ +
Sbjct: 492 AGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVT 551
Query: 321 YNIMVDAYGRA 331
YN ++DA+G++
Sbjct: 552 YNTIIDAFGKS 562
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 56/266 (21%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YG++ F ++ P+ TY+ L+ Y +G+ A V+ + ++ G
Sbjct: 450 LINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 509
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA------- 237
L P V+++S+ID L K G + A+ + M +P+ TY +I+ +GK+
Sbjct: 510 LKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEED 569
Query: 238 -------------------------------------SKSFMALKLFNEMRSHKCKPNIC 260
+ + L+LF +M +PN+
Sbjct: 570 PEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVV 629
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY--AYNALM-------EAYRLISRM- 310
T++A++NA +R E+A + EQL+ + VY AY LM +A L +++
Sbjct: 630 TFSAILNACSRCNNFEDAALLLEQLR--LFDNFVYGVAYGLLMGYQEIWSQAQSLFNQLG 687
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHEG 336
M A YN + D G +G
Sbjct: 688 RMDSPTSSAFYNALTDVLWHFGQRQG 713
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ DS TY L+ Y G L+ + ++MR+ G+ PS + Y++ ID K G
Sbjct: 434 EMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAG 493
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A ++ K +P ++ I+ K AL L N+M KPN+ TY
Sbjct: 494 MHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYN 553
Query: 264 ALVNAFAREGLCEEAE 279
+++AF + + E +
Sbjct: 554 TIIDAFGKSKVLSEED 569
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEMR 251
++ I + G +A+ + + MK +P+T TY +I+ GK L F +M
Sbjct: 237 SALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQML 296
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
+ P+ T+ +L++A +R G E+A +F+++ GI D+Y YN ++A
Sbjct: 297 RDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIE 356
Query: 305 ----RLISRMHMGCEPDRASYNIMVDAYGR 330
L+ +P+ +Y+ ++D Y +
Sbjct: 357 LAMQVLLDMEAKNVKPNVVTYSTLIDGYSK 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T I GK S+ +A + F+ + + +AL++A+AR GL EA + E ++G
Sbjct: 202 TAAIGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKG 261
Query: 288 AGIEPDVYAYNALMEA--------------YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
AG+ P YNA+++A +R + R + C PDR ++N ++ A RAG
Sbjct: 262 AGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLRDRL-C-PDRKTFNSLLSACSRAG 318
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y++L+ +G + +F M++ G A YN+ +DG K G KA E
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 353
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + MK C QP+ TY +++ K + A LF E +S + N+ Y++L++ F
Sbjct: 354 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 413
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRA 319
+ G +EA I E++ G+ P+VY +N+L++A S M C P+
Sbjct: 414 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 473
Query: 320 SYNIMVDAYGRA 331
+Y+I+++ R
Sbjct: 474 TYSILINGLCRV 485
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 80/147 (54%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L+ + G +++A + EM K GL P+ +NS +D L+K +A+ FQ MK
Sbjct: 405 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 464
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P+T TY+++IN + K A + +M+ PN+ TYT +++ A+ G
Sbjct: 465 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 524
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA 303
+A +FE+ + G PD ++NAL+E
Sbjct: 525 DAYSLFERFKANGGIPDAASFNALIEG 551
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 134 LHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
+HK E LE + +C+ PT TY ++ L++A +F E + G+ + V+Y
Sbjct: 348 VHKAYEI--LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 405
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+S IDG K G +A I + M + P+ T+ +++ KA + AL F M+
Sbjct: 406 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 465
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
KC PN TY+ L+N R +A ++ +Q G+ P+V Y ++ +
Sbjct: 466 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 525
Query: 303 AYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
AY L R G PD AS+N +++ A
Sbjct: 526 AYSLFERFKANGGIPDAASFNALIEGMSNA 555
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +Y ++ C +G L +AE +F +M P A YN+ I G G + A ++
Sbjct: 16 PDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 75
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+R++ C PS ++ ++ GK K AL LF M+ +PN TY +++
Sbjct: 76 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCL 134
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI-SRMHMGCEPDRAS 320
G EEA I ++++ A + P++ N ++ EAY++ S GC PD +
Sbjct: 135 GGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT 194
Query: 321 YNIMVDAYGRAG 332
Y ++D G+ G
Sbjct: 195 YCSLIDGLGKKG 206
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ G+K +A + ++LD+ Y L++ + + G E +F+E+ + G
Sbjct: 198 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + N+Y+D + K G +K IF+ ++ P +Y+++I+ KA ++
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+ M+ + Y A+V+ F + G +A EI E+++ ++P V Y A+++
Sbjct: 318 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 377
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
I R+ G E + Y+ ++D +G+ G
Sbjct: 378 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ E++ P TY +++ C+ G +E+A + EM L P+ + N +D L
Sbjct: 108 LSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 167
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K ++A +IF+ + C P TY +I+ GK + A +LF +M N
Sbjct: 168 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 227
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYRLISR- 309
YT+L+ F G E+ +IF++L G +PD+ N M E R+I
Sbjct: 228 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 287
Query: 310 -MHMGCEPDRASYNIMVDAYGRAG 332
G PD SY+I++ +AG
Sbjct: 288 IRSYGFLPDVRSYSILIHGLTKAG 311
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I YG + A + LE L R CIP+ ++ +L +++A ++F M+K
Sbjct: 59 MIMGYGSAGRFEDA-YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD 117
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P S+ YN ID L GG ++A I M+ P+ T +M++ KA K A
Sbjct: 118 AEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 176
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+F C P+ TY +L++ ++G +EA +FE++ AG + Y +L+
Sbjct: 177 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 236
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ + R + GC+PD N +D +AG
Sbjct: 237 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 276
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE + ++ R +P Y ++ Y +G E A + +R+ G PS V +NS +
Sbjct: 36 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 95
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
L K +A+ +F+ MK+D +P++ TY ++I++ + A ++ +EM
Sbjct: 96 TCLGKKRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 154
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN+ T +V+ + EEA +IFE G PD Y +L+ EAYRL
Sbjct: 155 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 214
Query: 307 ISRM 310
+M
Sbjct: 215 FEKM 218
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F E++ GL P V Y S I L K G +A E+F +M+ + P Y MI YG
Sbjct: 6 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A + A KL +R C P++ ++ +++ ++ +EA +FE ++ EP+
Sbjct: 66 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSST 124
Query: 297 YNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
YN ++ EAYR++ M H P+ + NIMVD +A
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 170
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ G +++A +F +M G + VVY S I G +
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 247
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+IF+ + R C+P ++ KA + +F ++RS+ P++ +Y+ L++
Sbjct: 248 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGC-EPDR 318
+ G E IF ++ G D AYNA+++ AY ++ M C +P
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367
Query: 319 ASYNIMVDAYGR 330
A+Y +VD +
Sbjct: 368 ATYGAIVDGLAK 379
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
MA K F+E+++ KP+ +YT+++ + G EAEE+F Q++ P YAYN ++
Sbjct: 1 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60
Query: 302 ----------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+AY+L+ R+ GC P S+N ++ G+
Sbjct: 61 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 100
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A + F +K +P +YT MI + KA + A +LF +M + + P Y ++
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPD 317
+ G E+A ++ E+L+ G P V ++N+++ EA L M EP+
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121
Query: 318 RASYNIMVD 326
++YNI++D
Sbjct: 122 SSTYNIIID 130
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+ +A E++ P T+ LL A + + +A F+ M++
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ Y+ I+GL + KA +Q M++ P+ TYT MI+ K A
Sbjct: 468 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 527
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
LF +++ P+ ++ AL+ + EA
Sbjct: 528 SLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+ +C + A ++ +M + G P V YN+ ID L K A +
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ ++R +P+ TYT ++N +S+ A +L ++M K PN+ TY+AL++AF +
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
G EA+E+FE++ I+PD+ Y++L+ L R+ GC D S
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 321 YNIMVDAYGRA 331
YN +++ + +A
Sbjct: 333 YNTLINGFCKA 343
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P TY+ LL A+ +G + +A+ +F EM + + P V Y+S ++GL
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHD 309
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F M C +Y +IN + KA + +KLF EM N TY
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L+ F + G ++A+E F Q+ GI PD++ YN L+
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ + C + + A F+E+ + G+ P+ V Y + ++GL A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + P+ TY+ +++ + K K A +LF EM P+I TY++LVN
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCL 307
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+EA ++F+ + G DV +YN L+ + +L M G + +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 321 YNIMVDAYGRAG 332
YN ++ + +AG
Sbjct: 368 YNTLIQGFFQAG 379
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+ + +A+ + E++ P TY+ L+ C+ +++A +F M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG 325
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN+ I+G K + +++F+ M + +T TY +I + +A A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ F++M P+I TY L+ G E+A IFE +Q ++ D+ Y ++
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG-LHEGKCSYS 341
EA+ L + + G +PD +Y M+ G LHE + Y+
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 88 SLPPTHATWDDLIN-VSVQLRL---NKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKA 138
S+ P T+ L+N + + R+ N+ +D +V C++ + LI + + +
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ E+ + TY L++ + +G ++KA+ F +M +G+ P YN + G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G +KA+ IF+ M++ TYT +I K K A LF + KP+
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I TYT +++ +GL E E ++ +++ G+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y ++ K+A + ++L P TY L C G ++ A + EM + G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + YNS ++GL K GN +AV++ + M+ P TYT +++ Y K+ + A
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L +M + +P + T+ L+N F G+ E+ E++ + + GI P+ YN+L++ Y
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRA 331
+ + M G PD +YNI++ + +A
Sbjct: 514 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 551
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
ILL+ G+ + +AE E++ P Y L+ +C G + A +F EM+K
Sbjct: 230 ILLLCKTGKVA---EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P + Y + I GL + G +A ++F M +P TYT +I+ Y K K
Sbjct: 287 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 346
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A L N+M PNI TYTAL + + G + A E+ ++ G+E ++Y YN+L+
Sbjct: 347 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 406
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
+A +L+ M + G PD +Y ++DAY ++
Sbjct: 407 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ C +G + +AE V REM G+ P V+Y + IDG K GN A +
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M++ P TYT +I + + A KLF+EM + +P+ TYTAL++ + +
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
EG +EA + Q+ G+ P++ Y AL + A L+ M G E + +
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 321 YNIMVDAYGRAG 332
YN +V+ +AG
Sbjct: 401 YNSLVNGLCKAG 412
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + E++ R P E TY L+ YC G +++A ++ +M + GL P+ V Y +
Sbjct: 311 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 370
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K G A E+ M R + + TY ++N KA A+KL +M
Sbjct: 371 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 430
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P+ TYT L++A+ + A E+ Q+ ++P V +N LM + +L
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Query: 307 ISRM-HMGCEPDRASYNIMVDAY-------GRAGLHEGKCSYSLV 343
+ M G P+ +YN ++ Y ++ G C+ +V
Sbjct: 491 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 535
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + +A ++LD PT T+ +L+ +CMSG+LE E + + M + G
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A YNS I N + EI++ M P TY ++I + KA A
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
L +M + +Y AL+ F + EA E+FEQ++ G+ D YN
Sbjct: 559 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+ EM+ GL P+ YN I L K G +A + + M + P YT +I+ +
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K A +LF+EM+ K P+ TYTA++ + G EA+++F ++ +EPD
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329
Query: 296 AYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y AL+ EA+ L ++M MG P+ +Y + D + G
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 377
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYI-------DGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
A +F +M YGL S N +I DG+ + +++ + M+ +P+
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY +I L K K A ++ EM S P+ YT L++ F + G A +F+++
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 286 QGAGIEPDVYAYNA----------LMEAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
Q I PD Y A +MEA +L M EPD +Y ++D Y + G
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 342
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 15/202 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ AYC S + +A + R+M L P+ V +N ++G G + ++
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P+ TY +I Y + +++ M + P+ TY L+ +
Sbjct: 491 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRMHM-GCEPDRAS 320
+EA + + G G V +YNAL +EA L +M G DR
Sbjct: 551 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 610
Query: 321 YNIMVDAYGRAGLHEGKCSYSL 342
YNI D EGK +L
Sbjct: 611 YNIFAD----INYDEGKMELTL 628
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L+++ P V+ V L+ + + + E +L+ +P TY L+K YC+
Sbjct: 460 LDRELQPTVVTFNV---LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
+ ++R M G+ P YN I G K N ++A + + M + +Y
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 576
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG-------LCEEAEE 280
+I + K K A +LF +MR + Y + EG LC+EA E
Sbjct: 577 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+ A+C G +++ + VF M K G+ P+ V YNS +DG KA I
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + P ++Y++MIN + K K A+ LF EM P++ TY++L++ ++
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRAS 320
G A ++ +Q+ G+ P + YN++++A L++++ G +P+ +
Sbjct: 413 SGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYT 472
Query: 321 YNIMVDAYGRAG 332
Y+I++ ++G
Sbjct: 473 YSILIKGLCQSG 484
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + Q L A + ++L +P T+ L+K C+ G +++A ++
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + Y + I GL K G + A+++ QR+ + QP+ Y +I+ K A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF+EM S P++ TY+AL++ F G +A ++F ++ I+PDVY +N L+ A
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304
Query: 304 Y---------RLISRMHM--GCEPDRASYNIMVDAY 328
+ + + M M G +P+ +YN ++D Y
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ C G A + + + + P+ V+YN+ ID + K +A ++F M
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P TY+ +I+ + K A+ LFN+M KP++ T+ LVNAF ++G
Sbjct: 252 ISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
+E + +F+ + GI+P+ YN+LM+ Y L+ ++ G PD SY+IM
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371
Query: 325 VDAY 328
++ +
Sbjct: 372 INGF 375
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 137 KAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A L+ +D + P Y ++ + C L+ +A +F EM G+ P V Y++
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G G A+++F +M + +P T+ +++N + K K +F+ M
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
KPN TY +L++ + +A+ IF + G+ PD+ +Y+ ++ EA
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
L MH PD +Y+ ++D ++ G+ SY+L
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKS----GRISYAL 420
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y++++ +C ++A +F+EM + + P V Y+S IDGL K G A+++
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M P+ TY +++ K + A+ L +++ +PN+ TY+ L+ +
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G E+A ++FE L G +V Y ++ EA L+S+M GC PD +
Sbjct: 483 SGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Query: 321 YNIMV 325
Y I++
Sbjct: 543 YEIII 547
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I++ + L +A + E++ P TY+ L+ +C+ G L A +F +M
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P +N ++ K G ++ +F M + +P+ TY +++ Y + A
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+FN M P+I +Y+ ++N F + +EA +F+++ I PDV Y++L++
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 303 --------AYRLISRMH-MGCEPDRASYNIMVDA 327
A +L+ +MH G P +YN ++DA
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + +A + E+ IP TY+ L+ SG + A + +M
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+PP+ YNS +D L K KA+ + ++K QP+ TY+++I ++ K A
Sbjct: 430 GVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA 489
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+F + N+ TYT ++ F EGL EA + +++ G PD Y ++
Sbjct: 490 RKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 134 LHKKAEFTY-LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L K +Y L+L+D PT TY +L A C ++KA A+ +++ G+ P+
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
Y+ I GL + G + A ++F+ + + +TYT+MI + AL L +
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLS 529
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+M + C P+ TY ++ + ++ + AE++ ++ G+ P
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A ++F + + P A +N + L+K + + + Q+M+ +P+ +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN + + A +F ++ P+ T+T L+ +G ++A +++ G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185
Query: 290 IEPDVYAYNALME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
D +Y L+ A L+ R+ +P+ YN ++D+ + L
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 15/253 (5%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
T WD + V +R + P V + + LI G+ ++A + ++D C
Sbjct: 136 TALRWDSALKVFDLMRDQVWYRPYV---GIYVKLITMLGKCKQPERAHELFQAMVDEGCA 192
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P ++Y L+ AY SG ++A ++ +M+ G P Y+ I L + ++
Sbjct: 193 PNLESYTALVSAYSRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKY 252
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + M R +P+ TY +I+ YGKA + EM + CKP++ T + + AF
Sbjct: 253 LMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFG 312
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHMGCEPDR--------A 319
G E E +E+ Q +GI P++ YN L+++Y ++ +M E +
Sbjct: 313 GSGQIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIV 372
Query: 320 SYNIMVDAYGRAG 332
+YN+++DA+GRAG
Sbjct: 373 TYNVVIDAFGRAG 385
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG+ + E T LE+L C P T L+A+ SG +E E+ + + + G
Sbjct: 272 LIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASG 331
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN +D K +K + + M++ + TY ++I+ +G+A
Sbjct: 332 ISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQME 391
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M+S + KPN T +LV A+ R G ++ + + ++ + I D+ +N L++A+
Sbjct: 392 YIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAF 451
Query: 305 ----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHEGKCSY 340
++ M + C+PD+ + M+ + G+ + + Y
Sbjct: 452 GRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKWFLIKGIDDHRVQY 498
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 53/258 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L+ AY + +A F+ LE + + C P TY++L+K+ + E+ + + +M +
Sbjct: 201 LVSAYSRSGRFDRA-FSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMAR 259
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP-------------------- 222
G+ P+ V YN+ ID K G + M + C+P
Sbjct: 260 AGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIET 319
Query: 223 ---------------STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+ +TY ++++ YGKA + M+ + I TY +++
Sbjct: 320 MESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVID 379
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGC 314
AF R G E+ E IF ++ I+P+ +L+ AY R++ +
Sbjct: 380 AFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITL 439
Query: 315 EPDRASYNIMVDAYGRAG 332
D +N +VDA+GR G
Sbjct: 440 --DIVFFNCLVDAFGRVG 455
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/163 (18%), Positives = 75/163 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+++YG+ +++K + T TY +++ A+ +G LE+ E +FR M+
Sbjct: 341 ILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSE 400
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ V S + + G+ +K + + ++ + +++ +G+
Sbjct: 401 RIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAFGRVGCLAEM 460
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ + M+ +CKP+ T T ++ F +G+ + + L+
Sbjct: 461 WDVLDIMKLQRCKPDKVTCTTMIKWFLIKGIDDHRVQYLRDLK 503
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 133/322 (41%), Gaps = 47/322 (14%)
Query: 37 RKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATW 96
R+ S+ ++G F FP+L RF + F SL +H
Sbjct: 119 RQLTSSILALFPRHGLAFTPRTFPIL------FERFAMSHRRPDLAIRLFLSLHRSHGIA 172
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DL N D +V KS + + L+ R P T
Sbjct: 173 QDLP------LFNSLLDALV---------------KSRRASKAASLVRALEQRFPPDAVT 211
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L +C +A + R+M + G+ P+ YN + G + G Q A + F +MK
Sbjct: 212 YNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMK 271
Query: 217 R-----DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
R + C+P +YT +++ G A + A K+F+EM CKP+ TY AL+ +
Sbjct: 272 RRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCK 331
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
+G E+A +F+ + G P+V Y L+ A +L+ RM GCEP+ +
Sbjct: 332 KGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQT 391
Query: 321 YNIMVDAYGRAGLHEGKCSYSL 342
YN+++ R L EG+ L
Sbjct: 392 YNVLI----RYSLEEGEIEKGL 409
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P +Y +L ++G L+KA VF EM G PS YN+ I K GN +
Sbjct: 277 DENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLE 336
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV +F M R P+ TYT++I A K A+KL + M+S C+PN+ TY L+
Sbjct: 337 DAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLI 396
Query: 267 NAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEA 303
EG E+ ++FE + +G P+ YN ++ A
Sbjct: 397 RYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISA 434
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+ C P+ TY L++ C G LE A AVF +M + G P+ V Y I
Sbjct: 302 KARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLI 361
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKC 255
GL G +A+++ RMK + C+P+ +TY ++I + + L LF M + +C
Sbjct: 362 RGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEEC 421
Query: 256 KPNICTYTALVNA-FAR---EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
PN TY +++A F R E + A + E + G P + +N ++ L
Sbjct: 422 LPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVD-RGYLPRKFMFNRVLNGLMLTGNQE 480
Query: 312 MGCE 315
+ E
Sbjct: 481 LSRE 484
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +K + A + +++ IP TY +L++ C +G + +A + M+ G
Sbjct: 325 LIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEG 384
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMIN---LYGKASKS 240
P+ YN I L+ G +K +++F+ M K + C P+ +TY ++I+ + +A
Sbjct: 385 CEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDM 444
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+A ++ EM P + ++N G E + E+
Sbjct: 445 AVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQELSRELL 486
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 15/249 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WD + V +R + P + + I LI G+ +KA + ++D C P +
Sbjct: 121 WDSALKVFELMRDQVWYRPYI---GIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLE 177
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+Y L+ AY SG +A + M+ G P Y+ I L + +K +
Sbjct: 178 SYTALVSAYSRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTD 237
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R +P+T TY +I+ YGKA + +M S CKP+I T + + AF G
Sbjct: 238 MARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQ 297
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHMGCEPDR--------ASYNI 323
E E +E+ Q +GI P++ YN L+++Y ++ +M E + +YN+
Sbjct: 298 IETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNV 357
Query: 324 MVDAYGRAG 332
++DA+GRAG
Sbjct: 358 VIDAFGRAG 366
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG+ + E T L++L C P T L+A+ SG +E E+ + + + G
Sbjct: 253 LIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCYEKFQASG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN +D K +K + + M++ + TY ++I+ +G+A
Sbjct: 313 IVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQME 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M+S + KPN T ++V A+ R G ++ + + ++ + I D+ +N L++AY
Sbjct: 373 YIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTVLRIVENSDITLDIVFFNCLVDAY 432
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ + C+PD+ + M+ + G+ + + Y
Sbjct: 433 GRVGCLAEMWDILDLMKEHRCKPDKVTCATMIKWFLIKGIDDHRVQY 479
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 35/196 (17%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ A+G + E Y + S +P TY +LL +Y + + EK AV M+KY
Sbjct: 289 LRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYY 348
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA-------- 237
+ V YN ID + G+ ++ IF+ MK + +P+ T ++ YG+A
Sbjct: 349 SWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKT 408
Query: 238 -------SKSFMALKLFN--------------------EMRSHKCKPNICTYTALVNAFA 270
S + + FN M+ H+CKP+ T ++ F
Sbjct: 409 VLRIVENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCATMIKWFL 468
Query: 271 REGLCEEAEEIFEQLQ 286
+G+ + + L+
Sbjct: 469 IKGIDDHRVQYLRDLK 484
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 134/261 (51%), Gaps = 22/261 (8%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVL-MSCVSI--------LLIEAYGQKSLHKKAEFT 141
P H T++ LIN +L + K + +V+ M + LI+AYG +K FT
Sbjct: 402 PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC-FT 460
Query: 142 YLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
L + + I ++ ++ ++KA+C +G + +A A+ +M + P+A VYNS ID +
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ ++A+ + ++MK S TY L++ ++S+ A +L +R+ +P++
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-MGC----- 314
+Y +++A +G ++A E+ +++ GI P + + L+ A R+H M C
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Query: 315 -----EPDRASYNIMVDAYGR 330
EP + Y IMVDAY R
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVR 661
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + KAE +E+ S P+ +T+ L+ AY +G LEK V +M++ G
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 469
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + + S + K G +AV I M P+ + Y +I+ Y ++ + AL
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAL 529
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L +M++ +I TY L+ R +EAEE+ L+ G+ PDV +YN ++
Sbjct: 530 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 589
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG-LHEGKCSY 340
+A L+ M+ G P + + +V A AG +H+ +C Y
Sbjct: 590 CNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLY 637
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA+ + L+ + +PT Y L+ YC L A +F +M+ + P + YN+ I
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL K KA ++ M++ PS ET+ +I+ YG A + + ++M+ K
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ ++ ++V AF + G EA I + + + P+ YN++++AY
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +LL C +G +++ A+ EM + + P Y+ DGL + G Q + +
Sbjct: 262 PNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSL 321
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F + T ++++N K K A ++F + P Y L+N + +
Sbjct: 322 FAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQ 381
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
A IFEQ++ I PD YNAL+ +A L+ M G +P +
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET 441
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVK 348
+N ++DAYG AG E KC L ++ K
Sbjct: 442 FNTLIDAYGTAGQLE-KCFTVLSDMQQK 468
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 137 KAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ F E + SR I P TY L+ C ++ KAE + EM K G+ PS +N+
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID G +K + M++ + ++ ++ + K K A+ + ++M
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN Y ++++A+ G E+A + E+++ +G+ + YN L+ EA
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565
Query: 306 LISRM-HMGCEPDRASYNIMVDA 327
LI + + G PD SYN ++ A
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISA 588
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ +P TY++L +G + ++F E K G+ A + ++GL K G
Sbjct: 289 EMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 348
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA ++F+ + P+T Y +IN Y + A +F +M+S +P+ TY
Sbjct: 349 KVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM- 312
AL+N + + +AE++ +++ +G++P V +N L++AY ++S M
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G + D S+ +V A+ + G
Sbjct: 469 GIKSDVISFGSVVKAFCKNG 488
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 155 DTYAL--LLKAYCMSGLLEKAEAVFREM-RKYGLPP-SAVVYNSYIDGLLKGGNPQKAVE 210
DT+A +++A +G L+ A A+ R M R G PP A YN I GL + G A++
Sbjct: 156 DTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 215
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M P+ TY MI+ + K +L ++M KPN+ TY L++
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI--SRMHMGCEPDRASYNIMVDAY 328
R G +E + +++ + PD + Y+ L + S+ + + +M+ AY
Sbjct: 276 RTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY 335
Query: 329 GRAGLHEGKC 338
+ L G C
Sbjct: 336 TCSILLNGLC 345
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 50 YGS-GFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF---DSLPPTHATWDDLINVSVQ 105
YG+ G ++ F VLS Q+ ++ + ++ AF +P A DD+I
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIK--SDVISFGSVVKAFCKNGKIPEAVAILDDMI----- 501
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+ + + V +I+AY + ++A ++ +S + TY LLLK C
Sbjct: 502 ------YKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLC 555
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
S +++AE + +R GL P V YN+ I G+ KA+E+ Q M + +P+
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
T +++ A + L+ +M +P+ Y +V+A+ R CE ++
Sbjct: 616 TCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR---CENDSKV 668
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ + S +AE L + P +Y ++ A C G +KA + +EM KY
Sbjct: 549 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ ++ + L G ++Q+M +PS+ Y +M++ Y +
Sbjct: 609 GIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKV 668
Query: 244 LKLFNEM 250
L EM
Sbjct: 669 ASLKKEM 675
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I+A + KAE +++ + P + TY ++ Y + G ++ +FREM + GL
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P NSY+ L K G ++A E F M +P TY+++++ Y L
Sbjct: 329 MPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN 388
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
LFN M + + Y L++A+ + G+ +EA IF Q+Q G+ PD + Y ++ A+
Sbjct: 389 LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448
Query: 306 LISRM-----------HMGCEPDRASYNIMVDAY 328
+ R+ MG +PD YN ++ +
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGF 482
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+AYG++ + +A + ++ + +P TY ++ A+ G L A F +M
Sbjct: 407 ILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +VYNS I G GN KA E I + M R +P+T + +IN K +
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +F+ + +P++ T+ +L++ + G E+A + + + GIEPDV Y+AL++
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586
Query: 303 AY 304
Y
Sbjct: 587 GY 588
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ + G + KA +F EM + G+ P V Y+SYID L K KA
Sbjct: 223 CSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAE 282
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M + +P TY MI+ Y + +F EM P+I T + +++
Sbjct: 283 LVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSL 342
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDR 318
+ G +EA E F+ + G +PD+ Y+ L+ Y L + M G D
Sbjct: 343 CKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADH 402
Query: 319 ASYNIMVDAYGRAGLHE 335
+ YNI++DAYG+ G+ +
Sbjct: 403 SVYNILIDAYGKRGMMD 419
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++LL Y G + +F M G+ VYN ID K G +A+ I
Sbjct: 365 PDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLI 424
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL------ 265
F +M+ P TY +I + + + A+ FN+M + KP+ Y +L
Sbjct: 425 FTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCM 484
Query: 266 ------------------------------VNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+N+ +EG EA++IF+ + G PDV
Sbjct: 485 HGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVI 544
Query: 296 AYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+N+L++ Y L+ +M +G EPD +Y+ ++D Y R G
Sbjct: 545 TFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNG 592
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVE 210
P Y L++ +CM G L KA+ + EM G+P P+ V +NS I+ L K G +A +
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF + +P T+ +I+ YG K A + + M S +P++ TY+AL++ +
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
R G ++ +F ++ G++P Y ++
Sbjct: 590 RNGRIDDGLILFREMLSKGVKPTTITYGIILHG 622
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PT TY +L+ C + A+F K GL +V N + L AV
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175
Query: 211 I-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--RSHKCKPNICTYTALVN 267
+ RM +P T +Y+ ++ + S+S AL L + M +S C PN+ +Y +++
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---------RLISRMHM--GCEP 316
F REG +A +F ++ G+ PDV Y++ ++A L+ R + G EP
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295
Query: 317 DRASYNIMVDAYGRAG 332
D+ +YN M+ Y G
Sbjct: 296 DKVTYNCMIHGYSILG 311
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY--GLPPSAVVYNSYIDGLLKGGNPQKAV 209
P +Y+ +LK+ C ++A + M K G P+ V YN+ I G + G KA
Sbjct: 188 PDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKAC 247
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M + P TY+ I+ KA A + +M S+ +P+ TY +++ +
Sbjct: 248 NLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGY 307
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
+ G +E +F ++ G+ PD++ N+ M EA M G +PD
Sbjct: 308 SILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDL 367
Query: 319 ASYNIMVDAYGRAG 332
+Y++++ Y G
Sbjct: 368 VTYSVLLHGYAAEG 381
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ Y + G +EKA V M G+ P V Y++ +DG + G + +
Sbjct: 541 PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLIL 600
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M +P+T TY ++++ ++ A K+ +EM +I T ++ R
Sbjct: 601 FREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-YRLISRMH----------MGCEPDRAS 320
+EA +F++L ++ ++ N +++A Y++ R G P+ ++
Sbjct: 661 NNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNAST 720
Query: 321 YNIMVDAYGRAG-LHEGKCSYSLVELS 346
Y +M+ + G + E +SL+E S
Sbjct: 721 YGVMITNLLKEGSVEEADNMFSLMEKS 747
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 14/216 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT--YALLLKAYCMSGLLEKAEAVFREMRK 182
LI+ + KA+ E++ SR IP +T + ++ + C G + +A+ +F +
Sbjct: 478 LIQGFCMHGNLVKAKELISEMM-SRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P + +NS IDG G +KA + M +P TY+ +++ Y + +
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDD 596
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
L LF EM S KP TY +++ +G A+++ ++ +G D+ ++
Sbjct: 597 GLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILG 656
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA L ++ M + + A N M+DA
Sbjct: 657 GLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDA 692
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 76/195 (38%), Gaps = 26/195 (13%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG-------GNPQKAVEIFQRMKRDCCQPS 223
E +F E+ + P N ++ L + P AV +F R+ R+ +P
Sbjct: 54 EDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSLAVALFNRICREEARPR 113
Query: 224 TE-----TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
TY ++++ +A + + LF K ++ L+ ++A
Sbjct: 114 VALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDA 173
Query: 279 EEIF-EQLQGAGIEPDVYAYNALMEAY-------RLISRMHM------GCEPDRASYNIM 324
+ ++ G+EPD +Y+ ++++ R + +H GC P+ SYN +
Sbjct: 174 VNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTV 233
Query: 325 VDAYGRAGLHEGKCS 339
+ + R G C+
Sbjct: 234 IHGFFREGEVSKACN 248
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 144 ELLDS----RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
EL DS +P TY +++ G +E+A+ +F M K G PS+ + N+ I L
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVL 763
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
L+ G KA ++ T +LM++L+ + K
Sbjct: 764 LEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGK 803
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++S T ++L C + ++A A+F+++ + + + N+ ID + K
Sbjct: 638 EMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVR 697
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A E+F + P+ TY +MI K A +F+ M C P+
Sbjct: 698 KREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLN 757
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGI 290
++ +G +A ++ G I
Sbjct: 758 NIIRVLLEKGEISKAGNYLSKVDGKTI 784
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI+ Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGXCKEGDLETAFEY 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q DS T W L P+ +++ L+N +++ L++ + +M +
Sbjct: 152 IRLAQSVFDSITKW----GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LB+ +P T+ L+ +C +G ++ A ++R+M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 M 301
+
Sbjct: 388 I 388
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +P TY L+ C G L++A + EM GL P + Y + IDG K
Sbjct: 264 YRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N ++G ++ +++Q G P+V
Sbjct: 384 YTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNV 416
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L + M++ P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 IGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K ++ L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI--YGLCKKGDLKQAHDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKDG 331
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 313 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAE 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRIAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ REG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P++V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT 322
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ ++G + A E +++ D Y AL+ +A +++ M +G
Sbjct: 323 LIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVG 382
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 383 LKPDARTYTMIINEFCKKG 401
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L+ +C +E A F E+ GL P+ VVYNS I G + N + A+ + Q M
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
++ + YT +I K K +AL L++EM S P+I YT L+N + G E
Sbjct: 702 KNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLE 761
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A +I +++ G I P V YN L+ EA+RL M G PD +Y+I+V
Sbjct: 762 NASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821
Query: 326 DA 327
+
Sbjct: 822 NG 823
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 95/187 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ + +K ++A + +++ + PT+ T+ ++ +G + + + K
Sbjct: 504 LLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQ 563
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G +++ YNS IDG K G A+ ++ M P TYT +I+ K++K +A
Sbjct: 564 GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLA 623
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ ++M+ K ++ Y+AL++ F + E A + F +L G+ P+ YN+++
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683
Query: 304 YRLISRM 310
+ ++ M
Sbjct: 684 FIHLNNM 690
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +Y L+ +C G ++KA ++ + + + GL P+AV Y IDG K G+ ++A +
Sbjct: 462 PSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVV 521
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M P+ T+ +IN GK + N TY ++++ F +
Sbjct: 522 FEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK 581
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE--PDRASYNIMVDAYG 329
EG + A + ++ +GI PDV Y +L++ +++ + E D + +D
Sbjct: 582 EGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVA 641
Query: 330 RAGLHEGKCSYSLVELSVKHY 350
+ L +G C +E + K +
Sbjct: 642 YSALIDGFCKMHDMESASKFF 662
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 27/259 (10%)
Query: 72 FVQREVDSNTIWDAF------------------DSLPPTHATWDDLIN---------VSV 104
FV + N+I D F + P T+ LI+ +++
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624
Query: 105 QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY 164
++ + K+ + L LI+ + + + A + ELLD P Y ++ +
Sbjct: 625 EMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGF 684
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
+E A + +EM K +P VY S I GLLK G A++++ M P
Sbjct: 685 IHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDI 744
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
YT++IN + A K+ EM + P++ Y L+ REG +EA + ++
Sbjct: 745 VMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDE 804
Query: 285 LQGAGIEPDVYAYNALMEA 303
+ G+ PD Y+ L+
Sbjct: 805 MLDKGLVPDDTTYDILVNG 823
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 151 IPTEDTYAL-----------------------------------LLKAYCMSGLLEKAEA 175
+P++ TY L+K YC+ G + A
Sbjct: 287 VPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQ 346
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+F E+ + G+ P V+++ I+G K G+ +KA E++ RMK QP+ ++ +
Sbjct: 347 LFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFH 406
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+ + A LF+E H N+ TY L+ G EA ++E++ GI P +
Sbjct: 407 EQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLV 465
Query: 296 AYNALM----------EAYRLI-SRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+YN L+ +AY ++ S + G +P+ +Y +++D + + G E
Sbjct: 466 SYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E + +++L + A + E ++ I TY +LLK G + +A ++ +M G
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVE-HGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS V YN+ I G K G KA + + + +P+ TYTL+I+ + K S A
Sbjct: 460 ITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAF 519
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M + P T+ ++N + G E ++ G YN++++ +
Sbjct: 520 VVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGF 579
Query: 305 --------RLISRMHM---GCEPDRASYNIMVDA 327
L++ M G PD +Y ++D
Sbjct: 580 FKEGAVDSALLAYREMCESGISPDVITYTSLIDG 613
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++++A G E+ E F+E + GL A Y+ + + + + A E+ + M
Sbjct: 222 TLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEM 281
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ PS TYT +I K AL+L +EM S N+ +L+ + G
Sbjct: 282 REFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDV 341
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
A ++F+++ G+ PDV ++ L+ +AY L +RM MG +P+ N +
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKH 349
++ + L E +Y L + +V+H
Sbjct: 402 LEGFHEQNLLEH--AYGLFDEAVEH 424
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ T TY ++ + G ++ A +REM + G+ P + Y S IDGL K A+E
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALE 625
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ MK + Y+ +I+ + K A K F E+ PN Y ++++ F
Sbjct: 626 MHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFI 685
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRA 319
E A + +++ + D+ Y +++ ++ + + PD
Sbjct: 686 HLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIV 745
Query: 320 SYNIMVDAYGRAG 332
Y ++++ G
Sbjct: 746 MYTVLINGLSNNG 758
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ +P LL A ++ A ++ EM + G+ + + +K G
Sbjct: 176 MLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGK 235
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++ + F+ K + Y++++ + +A +L EMR P+ TYTA
Sbjct: 236 FEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTA 295
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------G 313
++ A ++G EA + +++ G+ +V +LM+ Y ++ +++ G
Sbjct: 296 VIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGG 355
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD ++++++ + G
Sbjct: 356 VVPDVVIFSVLINGCSKVG 374
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ YC +G LE A ++++EMR+ + + V Y + IDG K G Q+A E+
Sbjct: 196 PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ RM D +P++ YT +I+ + + S A+K +M + + +I Y +++
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
G +EA EI E ++ + + PD+ + +M AY R+ + ++M G EPD +
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 321 YNIMVDAYGRAG-LHEG 336
+ M+D + G LHE
Sbjct: 376 LSTMIDGIAKNGQLHEA 392
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ V Y+++ID K G Q A++ F MKRD P+ T+T +I+ Y KA +A+ L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-- 304
+ EMR + N+ TYTAL++ F ++G + AEE++ ++ +EP+ Y +++ +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 305 --------RLISRM-HMGCEPDRASYNIMVDAY-GRAGLHEG 336
+ +++M + G D +Y +++ G L E
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 117/257 (45%), Gaps = 20/257 (7%)
Query: 92 THATWDDLINVSVQLRL------NKKWDP----IVLMSCVSILLIEAYGQKSLHKKAEFT 141
T++TW D S +L+L + K D +V +C LI+ Y + + A
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTC----LIDGYCKAGDLEVAVSL 220
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ R TY L+ +C G +++AE ++ M + + P+++VY + IDG +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A++ +M + Y ++I+ K A ++ +M P++
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC------E 315
+T ++NA+ + G + A ++ +L G EPDV A + +++ ++H +
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 316 PDRASYNIMVDAYGRAG 332
+ Y +++DA + G
Sbjct: 401 ANDVMYTVLIDALCKEG 417
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 48/229 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P ++ ++ C G ++ AE + M ++G P + YNS IDG + G+ + A +
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 212 -------------------------FQRMKR------------DCCQPSTETYTLMINLY 234
F +MK CC P+ TY+ I+ +
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTF 173
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+ + +ALK F+ M+ PN+ T+T L++ + + G E A ++++++ + +V
Sbjct: 174 CKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNV 233
Query: 295 YAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y AL++ + + SRM EP+ Y ++D + + G
Sbjct: 234 VTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +L+ A C G + E +F ++ + GL P +Y S+I GL K GN A ++ RM
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 217 RDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
++ YT +I YG ASK M A ++F+EM + P+ + L+ A+ +EG
Sbjct: 466 QEGLLLDLLAYTTLI--YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
Query: 275 CEEAEEIFEQLQGAGI 290
A ++ +Q G+
Sbjct: 524 MAAASDLLLDMQRRGL 539
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S +P + ++ AY SG ++ A ++ ++ + G P V ++ IDG+ K G +
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 208 AVEIFQRMKRDCCQPSTET-YTLMIN-------------LYGKASKS------FM----- 242
A+ F C + + + YT++I+ L+ K S++ FM
Sbjct: 392 AIVYF------CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 243 -----------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
A KL M ++ YT L+ A +GL EA ++F+++ +GI
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Query: 292 PDVYAYNALMEAY 304
PD ++ L+ AY
Sbjct: 506 PDSAVFDLLIRAY 518
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G P +NS + + K G + A +I M R C+P +Y +I+ + G +
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ L+ CKP+I ++ +L N F++ + +E ++ + P+V Y+
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTW 169
Query: 301 MEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
++ + + + + P+ ++ ++D Y +AG
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAG 212
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++A++ R+++ P T I+ ++ ++LK + S P+ ++ ++
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMH 311
V+ + G + AE+I + G EPDV +YN+L++ + L +
Sbjct: 63 VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122
Query: 312 MGCEPDRASYNIMVDAYGR 330
C+PD S+N + + + +
Sbjct: 123 FICKPDIVSFNSLFNGFSK 141
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 28/270 (10%)
Query: 80 NTIWDAFDSLPPTH------ATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKS 133
NT+ +A P +H A + D I + V++ N ++ ++ SC+ EA +
Sbjct: 163 NTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNS-FNILIHGSCMENRFGEAI--RV 219
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L K + D C P TY +L C G L +A + +M+ GL P+ +N
Sbjct: 220 LGK--------MRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFN 271
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ G + G ++A + + M ++ P TY +MI+ + K + A++L EM +
Sbjct: 272 ILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENL 331
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
K P++ TY L+N G EE ++ E+++G G++P+ YN ++ E
Sbjct: 332 KLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEV 391
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ + +M GC PD +YN ++ + + G
Sbjct: 392 DKTVRKMEESGCLPDIVTYNTLISWHCKVG 421
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 90/181 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ + +K + + T ++ +S C+P TY L+ +C G +++A + EM +
Sbjct: 377 VMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRK 436
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL V N+ + L + +A ++ +R +Y +I Y K K+ A
Sbjct: 437 GLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQA 496
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+L++EM+ + P+I TY +++ + G +A + ++L +G+ PD YN ++
Sbjct: 497 LRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHG 556
Query: 304 Y 304
Y
Sbjct: 557 Y 557
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 15/192 (7%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E +Y L+ Y +A ++ EM++ + PS + YNS I GL + G +A++
Sbjct: 477 EVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLD 536
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
+ P TY +I+ Y + + A + N+M KP++ T L+ +EG
Sbjct: 537 ELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEG 596
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH---MGCEPDRAS 320
+ E+A ++F G + D +YN ++ EA+ L+ M +G PD +
Sbjct: 597 MLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG--PDCYT 654
Query: 321 YNIMVDAYGRAG 332
YN ++ AG
Sbjct: 655 YNAILGGLTDAG 666
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + +A + E+ + IP+ TY ++ C G +A E+ + G
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + YN+ I G + G +KA + +M +P T ++ K AL
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KLFN S + +Y ++ + +E EA ++ E+++ + PD Y YNA++
Sbjct: 603 KLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662
Query: 305 RLISRM 310
RM
Sbjct: 663 TDAGRM 668
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
ELL+S +P E TY ++ YC G +EKA +M + P V N+ + GL K G
Sbjct: 537 ELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEG 596
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+KA+++F +Y +I K + A L EM K P+ TY
Sbjct: 597 MLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYN 656
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG 289
A++ G ++AEE ++ G
Sbjct: 657 AILGGLTDAGRMKDAEEFISKIAEKG 682
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 152 PTEDTYALLLKA---YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
PT T LL A + S + ++AVF + K G+ + +N I G +A
Sbjct: 157 PTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEA 216
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ + +M+ C P TY +++ K + A L +M++ PN T+ LV
Sbjct: 217 IRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVG 276
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
R G +EA + E + + PD + YN ++ EA RL M ++ PD
Sbjct: 277 CCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPD 336
Query: 318 RASYNIMVDAYGRAGLHE 335
+YN +++ G E
Sbjct: 337 VVTYNTLINGCFEHGSSE 354
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + + P TY L+ G E+ + EM G+ P++V YN + +K G
Sbjct: 327 EMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKG 386
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + ++M+ C P TY +I+ + K K A +L +EM K + T
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLN 446
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ A RE +EA ++ + G D +Y L+ Y
Sbjct: 447 TMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGY 487
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +L+A C L++A + R+ G V Y + I G K +A+ ++ M
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K PS TY MI + K+ A+ +E+ P+ TY +++ + +EG
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQV 563
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIM 324
E+A + ++ +PDV N L+ +A +L + + G + D SYN +
Sbjct: 564 EKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTI 623
Query: 325 V 325
+
Sbjct: 624 I 624
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 49/179 (27%)
Query: 203 GNPQKAVEIFQRMKRDCCQPS--------------------------------------T 224
G P +A +IF RMKR QP+ T
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINT 197
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
++ ++I+ ++ A+++ +MR + C P+ TY +++ ++G EA ++
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257
Query: 285 LQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
++ G+ P+ +N L+ EA +I M PD +YN+M+ + + G
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQG 316
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR---EGLC 275
C S + I Y + A ++FN M+ +P + T L+NA R
Sbjct: 119 CLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSI 178
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
++ +F G++ + ++N L+ EA R++ +M GC PD +YN +
Sbjct: 179 RLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTI 238
Query: 325 VDAYGRAG-LHEGK 337
+D + G L+E +
Sbjct: 239 LDGLCKKGRLNEAR 252
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A F + + S C+P TY+ L+ + +G L+ A +++ +M G P+ VVY +
Sbjct: 349 KRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNM 408
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D L K +A + +M + C P+T T+ +I ++ AL +F+ MR + C
Sbjct: 409 VDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGC 468
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN TY L++ REG CE+A + ++ G E + +YN + EA
Sbjct: 469 PPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMI 528
Query: 306 LISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ RM + G +PD ++N ++ AY + G
Sbjct: 529 LLGRMIIQGIQPDAFTFNAIIHAYCKEG 556
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P T+ +L+K + G + A ++ M G PS + YN I GL G+ ++A+
Sbjct: 293 CVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRAL 352
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M + C P TY+ +I+ + KA +A+ ++N+M + CKPN+ YT +V+
Sbjct: 353 FVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVL 412
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------EAYRLISRMH----MGCEPDR 318
++ + ++AE + +++ P+ +N L+ A R ++ H GC P+
Sbjct: 413 CKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPND 472
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVELS 346
+YN ++ R EG C +L L+
Sbjct: 473 RTYNELLHGLFR----EGNCEDALRMLT 496
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 16/220 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+A Q A E+ C P E ++ ++ A C L++A + EM
Sbjct: 167 LLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM--- 223
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P YN+ + L ++ + M +P T YT ++ + KA + MA
Sbjct: 224 --TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMA 281
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M + C PN+ T+T LV F +G +A ++ + G P +YN L+
Sbjct: 282 CAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRG 341
Query: 304 YRLISRMH--------MG---CEPDRASYNIMVDAYGRAG 332
I + MG C PD +Y+ ++D + +AG
Sbjct: 342 LCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAG 381
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ A C + + V EM GL P V Y S + K + A I
Sbjct: 225 PVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAI 284
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + C P+ +T+T+++ + K AL ++N M + P+ +Y L+
Sbjct: 285 LARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCH 344
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G + A +F + + PDV Y+ L++ + + + GC+P+
Sbjct: 345 IGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVV 404
Query: 321 YNIMVD 326
Y MVD
Sbjct: 405 YTNMVD 410
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 49/262 (18%)
Query: 80 NTIWDAFD---SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
+T+ D F L + W+D+ N K + +V + V +L +K +
Sbjct: 371 STLIDGFSKAGDLDVAMSIWNDMTNAGC------KPNVVVYTNMVDVLC-----KKVMFD 419
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE ++ C P T+ L+++ C G +A VF MR+YG PP+ YN +
Sbjct: 420 QAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELL 479
Query: 197 DGLLKGGNPQKAVEIFQ-----------------------------------RMKRDCCQ 221
GL + GN + A+ + RM Q
Sbjct: 480 HGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQ 539
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P T+ +I+ Y K A + M + C NI YT+L++ + ++A
Sbjct: 540 PDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVY 599
Query: 282 FEQLQGAGIEPDVYAYNALMEA 303
++ GI P+ +N L+
Sbjct: 600 LLKMLYEGICPNEATWNVLVRG 621
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y LL A L+ V+ MRK G+ P+ YN I L + A +
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R C+P ++T +I+ K + A + EM P +Y A+V+A
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCG 239
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
+ E + +++ G+ PD AY +++ A+ +++RM GC P+ +
Sbjct: 240 QFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQT 299
Query: 321 YNIMVDAY 328
+ ++V +
Sbjct: 300 FTVLVKGF 307
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 163 AYCMSGLLEKAEAVF-REMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
A+ +G ++A F R G P+ VYN +D LL+ V ++ M++
Sbjct: 99 AFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGV 158
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+P+ TY L+I + + A ++ +EM C+P+ ++T +++A + +EA
Sbjct: 159 EPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARG 218
Query: 281 IFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYG 329
I ++ G +YNA++ E + ++ M H G PD +Y +V A+
Sbjct: 219 ILAEMTPVGA-----SYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFC 273
Query: 330 RA 331
+A
Sbjct: 274 KA 275
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C SG LEKA + M P+ V Y+S + GL K G+ +A+++
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+RM C P+ TYT +I+ A K A L +EM + C + +Y AL++ + R
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------------MGCEPDRA 319
G EEA+++F+++ PD Y L+ + SR+ G +PD
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366
Query: 320 SYNIMVDAYGRA 331
+Y+I+V Y RA
Sbjct: 367 TYSIVVAGYSRA 378
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 17/242 (7%)
Query: 104 VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLK 162
+++R + W P V+ LI+ + + +KA L +++ R C+P TY+ LL
Sbjct: 177 MEMREDGAWKPDVV---TYTALIDGFCKSGNLEKA-MKMLGVMEGRKCVPNVVTYSSLLH 232
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
C +G L++A +FR M G P+ V Y + I GL A + M CC
Sbjct: 233 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPA 292
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
T +Y +++ Y + + A +LF EM + C P+ TYT LV F EEA +
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 283 EQLQ-GAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGR 330
E ++ AGI+PDV Y+ ++ Y R E P+ +Y+ ++D +
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 412
Query: 331 AG 332
AG
Sbjct: 413 AG 414
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREM-R 181
+++ + L KA E+ D + + P TY+ ++ +C G +++A + REM
Sbjct: 14 VVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVT 73
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ G+ P V Y S +DGL + G +A E+ + MK +P T++ +I + A K
Sbjct: 74 RDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVD 133
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL---QGAGIEPDVYAYN 298
ALKL+ E+ + C+ + + +AL+ RE EA E+F+++ + +PDV Y
Sbjct: 134 EALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYT 193
Query: 299 ALMEAY----RLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
AL++ + L M M C P+ +Y+ ++ +AG
Sbjct: 194 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++++ Y + +A +EM + P+AV Y+S IDGL K G A+E+
Sbjct: 363 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEV 422
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ + + P TYT++I ++ AL L EM + + +P++ T+ +++ A R
Sbjct: 423 LKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCR 478
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
G +EA ++ + G+EP + Y L+E + RM + E
Sbjct: 479 LGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 522
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 28/238 (11%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY- 183
L++ Y + ++A+ + E+ C+P TY L++ +C + LE+A + M+
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V Y+ + G + +A E Q M P+ TY+ +I+ KA + A
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLC-----EEAEEIFEQLQGAGIEPDVYAYN 298
+++ + KP++ TYT ++ EGLC EEA + E++ +EP V +N
Sbjct: 420 MEVLKNVD----KPDVVTYTIVI-----EGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 299 ALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+++ EA++L+ M G EP +Y +++ + R G E +Y L E+
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME--IAYELFEV 526
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P E TY +++ C + L KA V +EMR + P V Y++ I+G K G +A E
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 211 IFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
I + M RD P TYT +++ + K A ++ EM+ +P+ T++AL+ +
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM----GCE 315
+EA ++++++ + D + +AL+ EAY L M M +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 316 PDRASYNIMVDAYGRAG 332
PD +Y ++D + ++G
Sbjct: 187 PDVVTYTALIDGFCKSG 203
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 124 LLIEAYGQ-KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+++ Y + K + AEF E++ P TY+ L+ C +G + A V + + K
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQ-EMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK 428
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
P V Y I+GL ++A+ + + M +PS T+ +I +
Sbjct: 429 ----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDE 484
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ--------GAGIEPDV 294
A KL M +H +P + TYT L+ F+R G E A E+FE ++ A + P+
Sbjct: 485 AWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE- 543
Query: 295 YAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
A++AL+ +A ++ + CEP +VD RAG E
Sbjct: 544 QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTE 595
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ R P+ T+ ++ A C G +++A + M +GL P V Y + ++G + G
Sbjct: 456 EMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 515
Query: 204 NPQKAVEIFQRMKRDCCQPST-------ETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ A E+F+ M+R + S+ + ++ +I KA + A+ + E+RS +C+
Sbjct: 516 RMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 575
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
P A+V+ R G EEA ++ + G+
Sbjct: 576 PAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFAREGLC 275
R+ P+ TY +++N KA + A ++ EMR K P++ TY+ ++N F ++G
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61
Query: 276 EEAEEIF-EQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS--YNIMVDAYGRAG 332
+ A EI E + G+ PDV Y ++++ +M CE R + D + +
Sbjct: 62 DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121
Query: 333 LHEGKCSYSLVELSVKHY 350
L G C+ V+ ++K Y
Sbjct: 122 LITGWCNARKVDEALKLY 139
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 20/240 (8%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
+RL+KK ++ LL + KK + LE+ + +PT TY ++
Sbjct: 294 MRLSKKASSFTYNPLITGLLARGFV-----KKVDDLQLEMENEGIMPTVVTYNAMIHGLL 348
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
SG +E A+A F EMR GL P + YNS ++G K GN ++A+ +F ++R P+
Sbjct: 349 QSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVL 408
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA--EEIFE 283
TY ++I+ Y + A +L EM C P++ TYT L+ +C A E F+
Sbjct: 409 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKG--SHNVCSLAMTREFFD 466
Query: 284 QLQGAGIEPDVYAYNA----------LMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
++ G+ PD +AYN + ++++L + + G D +YNI++D + G
Sbjct: 467 EMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTG 526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 114/281 (40%), Gaps = 51/281 (18%)
Query: 94 ATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTY--LELLDSRCI 151
A WDD+ V ++ L +P ++ L++++ ++ K + +E S C+
Sbjct: 210 ARWDDMSAVHAEM-LQLGIEPSIVTYNT---LLDSFSKEGRKDKIDMLLKEMEARGSSCL 265
Query: 152 PTEDTYAL----------------------------------LLKAYCMSGLLEKAEAVF 177
P + TY + L+ G ++K + +
Sbjct: 266 PNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQ 325
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM G+ P+ V YN+ I GLL+ G + A F M+ P TY ++N Y KA
Sbjct: 326 LEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKA 385
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
AL LF ++R P + TY L++ + R G EEA + E++ G PDVY Y
Sbjct: 386 GNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTY 445
Query: 298 NALMEAYRLISRMHM-----------GCEPDRASYNIMVDA 327
LM+ + + M G PD +YN + A
Sbjct: 446 TILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICA 486
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 102/250 (40%), Gaps = 46/250 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + ++A E+++ C+P TY +L+K L F EM
Sbjct: 412 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSK 471
Query: 184 GLPPS-----------------------------------AVVYNSYIDGLLKGGNPQKA 208
GL P V YN IDGL K GN + A
Sbjct: 472 GLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDA 531
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+ +M + QP TYT +I+ + + A K FN+M S P+ TYT +++A
Sbjct: 532 EELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHA 591
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
+ R G A F ++ G+EP+ YN L+ A + R + G P+
Sbjct: 592 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPN 651
Query: 318 RASYNIMVDA 327
+ +Y +++D
Sbjct: 652 KYTYTLLIDG 661
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 47/205 (22%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ FREM +G+ P N + L + M + +PS TY +++ +
Sbjct: 182 SAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSF 241
Query: 235 GKASKSFMALKLFNEM--RSHKCKPNICTYTALVNAFAREGLC----------------- 275
K + L EM R C PN TY ++ AR+G
Sbjct: 242 SKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKAS 301
Query: 276 -----------------EEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLI 307
++ +++ +++ GI P V YNA++ + +
Sbjct: 302 SFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFV 361
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAG 332
MG PD +YN +++ Y +AG
Sbjct: 362 EMRAMGLLPDVITYNSLLNGYCKAG 386
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 13/106 (12%)
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
S + L F EM SH P++ ++ ++ + ++ GIEP + YN
Sbjct: 177 STLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNT 236
Query: 300 LMEAYR----------LISRMHM---GCEPDRASYNIMVDAYGRAG 332
L++++ L+ M C P+ +YN+++ R G
Sbjct: 237 LLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKG 282
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y++L+ +G + +F M++ G A YN+ +DG K G KA E
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 485
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + MK C QP+ TY +++ K + A LF E +S + N+ Y++L++ F
Sbjct: 486 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 545
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRA 319
+ G +EA I E++ G+ P+VY +N+L++A S M C P+
Sbjct: 546 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 605
Query: 320 SYNIMVDAYGR 330
+Y+I+++ R
Sbjct: 606 TYSILINGLCR 616
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 80/147 (54%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L+ + G +++A + EM K GL P+ +NS +D L+K +A+ FQ MK
Sbjct: 537 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 596
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P+T TY+++IN + K A + +M+ PN+ TYT +++ A+ G
Sbjct: 597 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 656
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA 303
+A +FE+ + G PD ++NAL+E
Sbjct: 657 DAYSLFERFKANGGIPDAASFNALIEG 683
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +L+ A + E+A + R+M++ G ++ + + L + G A+ +
Sbjct: 43 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 102
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+K C +P Y + I+ +GKA MA K F+E+++ KP+ +YT+++ +
Sbjct: 103 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCK 162
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EAEE+F Q++ P YAYN ++ +AY+L+ R+ GC P S
Sbjct: 163 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 222
Query: 321 YNIMVDAYGR 330
+N ++ G+
Sbjct: 223 FNSILTCLGK 232
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 134 LHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
+HK E LE + +C+ PT TY ++ L++A +F E + G+ + V+Y
Sbjct: 480 VHKAYEI--LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 537
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+S IDG K G +A I + M + P+ T+ +++ KA + AL F M+
Sbjct: 538 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 597
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
KC PN TY+ L+N R +A ++ +Q G+ P+V Y ++ +
Sbjct: 598 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 657
Query: 303 AYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
AY L R G PD AS+N +++ A
Sbjct: 658 AYSLFERFKANGGIPDAASFNALIEGMSNA 687
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +Y ++ C +G L +AE +F +M P A YN+ I G G + A ++
Sbjct: 148 PDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 207
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+R++ C PS ++ ++ GK K AL LF M+ +PN TY +++
Sbjct: 208 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCL 266
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI-SRMHMGCEPDRAS 320
G EEA I ++++ A + P++ N ++ EAY++ S GC PD +
Sbjct: 267 GGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT 326
Query: 321 YNIMVDAYGRAG 332
Y ++D G+ G
Sbjct: 327 YCSLIDGLGKKG 338
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ G+K +A + ++LD+ Y L++ + + G E VF+E+ + G
Sbjct: 330 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRG 389
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + N+Y+D + K G +K IF+ ++ P +Y+++I+ KA ++
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+ M+ + Y A+V+ F + G +A EI E+++ ++P V Y A+++
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
I R+ G E + Y+ ++D +G+ G
Sbjct: 510 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 548
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ E++ P TY +++ C+ G +E+A + EM L P+ + N +D L
Sbjct: 240 LSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K ++A +IF+ + C P TY +I+ GK + A +LF +M N
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYRLISR- 309
YT+L+ F G E+ ++F++L G +PD+ N M E R+I
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 419
Query: 310 -MHMGCEPDRASYNIMVDAYGRAG 332
G PD SY+I++ +AG
Sbjct: 420 IRSYGFLPDVRSYSILIHGLTKAG 443
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I YG + A + LE L R CIP+ ++ +L +++A ++F M+K
Sbjct: 191 MIMGYGSAGRFEDA-YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P S+ YN ID L GG ++A I M+ P+ T +M++ KA K A
Sbjct: 250 AEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 308
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+F C P+ TY +L++ ++G +EA +FE++ AG + Y +L+
Sbjct: 309 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 368
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ + R + GC+PD N +D +AG
Sbjct: 369 FFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAG 408
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 12/191 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y + + + +G ++ A F E++ GL P V Y S I L K G +A E+
Sbjct: 113 PDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M+ + P Y MI YG A + A KL +R C P++ ++ +++ +
Sbjct: 173 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 232
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+ +EA +FE ++ EP+ YN ++ EAYR++ M H P+ +
Sbjct: 233 KRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291
Query: 321 YNIMVDAYGRA 331
NIMVD +A
Sbjct: 292 VNIMVDRLCKA 302
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ G +++A +F +M G + VVY S I G +
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 379
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F+ + R C+P ++ KA + +F ++RS+ P++ +Y+ L++
Sbjct: 380 KVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGC-EPDR 318
+ G E IF ++ G D AYNA+++ AY ++ M C +P
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499
Query: 319 ASYNIMVDAYGR 330
A+Y +VD +
Sbjct: 500 ATYGAIVDGLAK 511
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
YGLP A L++ AV M+R +P+ YT++I +A +
Sbjct: 6 YGLPNQACA--DLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPER 63
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL+L +M+ + + +T LV A AREG +A + ++++G+ +EPD+ YN ++
Sbjct: 64 ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCID 123
Query: 303 AYRLISRMHMGC-----------EPDRASYNIMVDAYGRAG 332
+ + M C +PD SY M+ +AG
Sbjct: 124 CFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAG 164
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+ +A E++ P T+ LL A + + +A F+ M++
Sbjct: 540 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 599
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ Y+ I+GL + KA +Q M++ P+ TYT MI+ K A
Sbjct: 600 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 659
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
LF +++ P+ ++ AL+ + EA
Sbjct: 660 SLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A + +A + + + +C P TY++L+ C KA +++M+K G
Sbjct: 575 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 634
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + I GL K GN A +F+R K + P ++ +I A+++ A
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 694
Query: 245 K-LFNEMRSHKCKPN 258
+ ++ S C N
Sbjct: 695 QTTVYQLSSSSCSWN 709
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY L+ +Y + L +A VF +M++ G P V Y + ID K G
Sbjct: 408 QMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAG 467
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ +++RM+ P T TY++MIN GK+ A +LF EM C PNI TY
Sbjct: 468 FLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYN 527
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
L+ A+ + A E++ +Q AG +PD Y+ +M EA + M
Sbjct: 528 ILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQN 587
Query: 314 -CEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 588 HWVPDEPVYGLLVDLWGKAG 607
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + ++A + ++ + C P TY L+ + +G L+ A +++ M++ G
Sbjct: 424 LIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVG 483
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K GN A +F M C P+ TY ++I L KA AL
Sbjct: 484 LSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTAL 543
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ +M++ KP+ TY+ ++ G EEAE +F +++ PD Y L++ +
Sbjct: 544 ELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLW 603
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M +D CQP+ TY +I+ YG+A+ AL +FN+M+ C+P+ TY L++
Sbjct: 404 KLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIH 463
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
A+ G + A ++E++Q G+ PD + Y+ ++ A+RL M GC P+
Sbjct: 464 AKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNI 523
Query: 319 ASYNIMVDAYGRA 331
+YNI++ +A
Sbjct: 524 VTYNILIALQAKA 536
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y + + P TY++++ SG L A +F EM G
Sbjct: 459 LIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQG 518
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN I K N Q A+E+++ M+ +P TY++++ + G A
Sbjct: 519 CVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAE 578
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F EMR + P+ Y LV+ + + G E+A E + + AG+ P+V N+L+ A+
Sbjct: 579 AVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAF 638
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+ R+ PD +YN++ + GL+ +Y+L+
Sbjct: 639 LRVHRL-----PD--AYNLLQNMV-TLGLNPSLQTYTLL 669
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 166 MSGLLEKA------EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
M G+L +A + +M K G P+ V YN I + ++A+ +F +M+
Sbjct: 389 MVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMG 448
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C+P TY +I+++ KA +A+ ++ M+ P+ TY+ ++N + G A
Sbjct: 449 CEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAH 508
Query: 280 EIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDRASYNIMVD 326
+F ++ G P++ YN L +E YR + G +PD+ +Y+I+++
Sbjct: 509 RLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYR--DMQNAGFKPDKVTYSIVME 566
Query: 327 AYGRAGLHE 335
G G E
Sbjct: 567 VLGHCGYLE 575
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C+P TY +L+ + + A ++R+M+
Sbjct: 493 VMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNA 552
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F M+++ P Y L+++L+GKA A
Sbjct: 553 GFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKA 612
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ ++ M PN+ T +L++AF R +A + + + G+ P + Y L+
Sbjct: 613 WEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 670
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
AV F +KR QP TYT M+ + G+A + KL +M C+PN+ TY
Sbjct: 366 AVGFFCWLKR---QPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYN 422
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
L++++ R EA +F Q+Q G EPD Y L++ A + RM +
Sbjct: 423 RLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEV 482
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y++M++ G++G
Sbjct: 483 GLSPDTFTYSVMINCLGKSG 502
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 19/243 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A Y ++ ++ P + TY+++++ G LE+AEAVF EMR+
Sbjct: 528 ILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQN 587
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY +D K GN +KA E + M R P+ T +++ + + + A
Sbjct: 588 HWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDA 647
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFARE------GLCEE--------AEEIFEQLQGAG 289
L M + P++ TYT L++ G C E A + + AG
Sbjct: 648 YNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAG 707
Query: 290 IEPDVYAYNALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
PD N + + MH E R + +VD ++GL E S V
Sbjct: 708 --PD--GQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 763
Query: 349 HYP 351
YP
Sbjct: 764 VYP 766
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 35/205 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G ++AE + E+ + +P E Y LL+ + +G +EKA + M +
Sbjct: 563 IVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRA 622
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----------- 232
GL P+ NS + L+ A + Q M PS +TYTL+++
Sbjct: 623 GLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDM 682
Query: 233 --------LYGKASKSFM----------------ALKLFNEMRSHKCKPNICTYTALVNA 268
+ G + +F+ K + M S + A+V+
Sbjct: 683 GFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDF 742
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPD 293
+ GL EEA ++E + PD
Sbjct: 743 LHKSGLKEEAGSVWEVAAQKNVYPD 767
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ + G ++ G+ + + M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LFNEM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMV 325
A EI++QL G PD+ YN L+ +A LI M M +PD+ +Y ++
Sbjct: 259 LAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGDLETAFEY 333
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C +++A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++++ P TY +I K A L +EM + KP+ TYT L++ +
Sbjct: 264 YKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCK 323
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E A E +++ I D AY AL+ +A +++ M +G +PD +
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGT 383
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 384 YTMIINEFCKKG 395
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L++ ++L L++ + M +
Sbjct: 152 MRLAQSVFDAITKW----GLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S +A + E+LD+ +P T+ L+ +C +G ++ A +++++
Sbjct: 208 TYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQL 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ + G++PD Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +LL P TY L+ C G L++A + EM L P + Y + IDG K
Sbjct: 264 YKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ M S KP+ T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G + ++ +++ G P V
Sbjct: 384 YTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCV 416
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ C G LE A + M K + V Y + I GL + G A ++
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ M +P TYT++IN + K KL EM P + T
Sbjct: 369 LRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L+ +P TY L+ YC G L+KA A EM G+ S V YN +I L G
Sbjct: 311 KMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEG 370
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A + + M+ P T+ ++IN Y + + A L +EM +P + TYT
Sbjct: 371 RMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYT 430
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HM 312
+L+ + +EA+ +F ++Q G+ PD+ +NAL++ A++L+ M +M
Sbjct: 431 SLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM 490
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD +YN ++ Y R G
Sbjct: 491 KVLPDEITYNTLMQGYCREG 510
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y K KA E++ + + TY L + A M G + A+ + +EMR+ G
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P AV +N I+G + G+ ++A + M QP+ TYT +I + GK ++ A
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF++++ P+I + AL++ G + A ++ +++ + PD YN LM+ Y
Sbjct: 447 ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ M G +PD SYN ++ Y + G
Sbjct: 507 CREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 545
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + K+A E++ PT TY L+ +++A+A+F ++++
Sbjct: 396 ILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQE 455
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P +V+N+ IDG GN +A ++ + M P TY ++ Y + K A
Sbjct: 456 GLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEA 515
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+L +EM+ KP+ +Y L++ +++ G ++A + +++ G +P + YNAL++
Sbjct: 516 RQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQG 575
Query: 303 ---------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
A L+ M G PD ++Y +++A EG
Sbjct: 576 LCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ +++ C G L+KA+ M G+ P+ V YN+ I G G Q+A IFQ M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P TY I+ K + A L +M PN TY AL++ + +G
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
++A +++ GI + YN + A + RM G PD ++NI+
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Query: 325 VDAYGRAGLHEGKCSYSLVE 344
++ Y R G + K ++ L++
Sbjct: 398 INGYCRCG--DAKRAFGLLD 415
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ LL++AYC +A F +++ G P+ N + LK Q A ++ M
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R + S T+ +MIN+ K K A + M + KPN+ TY +++ G +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268
Query: 277 EAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPDRASYNIMV 325
A IF+ ++ G+EPD Y YN+ L EA LI +M G P+ +YN ++
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 326 DAYGRAG 332
D Y G
Sbjct: 329 DGYCNKG 335
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 72 FVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQ 131
FV N + F L T W + + R+N + +++L E
Sbjct: 177 FVPNIETCNQMLSLFLKLNRTQMAW---VLYAEMFRMNIRSSLYTFNIMINVLCKEG--- 230
Query: 132 KSLHKKAEFT-YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
L K EF ++E L + P TY ++ +C+ G ++A +F+ M+ GL P
Sbjct: 231 -KLKKAKEFIGHMETLGVK--PNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCY 287
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YNS+I GL K G ++A + +M P+ TY +I+ Y A +EM
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
S ++ TY ++A EG +A+ + ++++ G+ PD +N L+ Y
Sbjct: 348 ISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGY 401
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+ AY + +A + + + +P +T +L + + A ++ EM +
Sbjct: 151 LLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM 210
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ S +N I+ L K G +KA E M+ +P+ TY +I+ + K A
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F M+ +P+ TY + ++ +EG EEA + ++ G+ P+ YNAL++
Sbjct: 271 RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330
Query: 304 Y 304
Y
Sbjct: 331 Y 331
>gi|242095134|ref|XP_002438057.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
gi|241916280|gb|EER89424.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
Length = 499
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY---GLPPSAVVYNSYIDGLLKGGNPQKA 208
P Y +L+K + G LE A V EMR+Y + P+ V Y++ I GL +GG +A
Sbjct: 183 PNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMMEA 242
Query: 209 VEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
E+F+ M ++D P Y ++I+ + + + A +F M+ + C+PN Y L+N
Sbjct: 243 FELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLIN 302
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
++ E A +FE+++ AG+EPD +Y AL+ EA L+ M GC
Sbjct: 303 GHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGCRA 362
Query: 317 DRASYNIMVDAYGRAG 332
D +YN++++ R G
Sbjct: 363 DVVTYNLVIEGLCRDG 378
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P TY+ L+ C G + +A +F EM K + P ++YN IDG + G KA
Sbjct: 221 PNLVTYSTLIAGLCRGGKMMEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARA 280
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF MK++ C+P+ Y +IN + K + A +F EMR+ +P+ +YTAL+
Sbjct: 281 IFGFMKKNDCEPNAFNYATLINGHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLC 340
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRA 319
R G +EA + +++ G DV YN ++E R + M + G + + A
Sbjct: 341 RHGSVDEAINLVLEMKQKGCRADVVTYNLVIEGLCRDGRTVEAMDLLESVPLEGVKLNVA 400
Query: 320 SYNIMVD 326
SY I+++
Sbjct: 401 SYRILMN 407
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R +P + Y +++ +C G ++KA A+F M+K P+A Y + I+G K + + A
Sbjct: 254 RIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLINGHCKKADIEAA 313
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ M+ +P +YT +I + A+ L EM+ C+ ++ TY ++
Sbjct: 314 RSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGCRADVVTYNLVIEG 373
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM 312
R+G EA ++ E + G++ +V +Y LM L SR M
Sbjct: 374 LCRDGRTVEAMDLLESVPLEGVKLNVASYRILMNC--LCSRGEM 415
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + + KA + + + C P YA L+ +C +E A +VF EMR
Sbjct: 264 VIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLINGHCKKADIEAARSVFEEMRNA 323
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P AV Y + I L + G+ +A+ + MK+ C+ TY L+I + ++ A
Sbjct: 324 GVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGCRADVVTYNLVIEGLCRDGRTVEA 383
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ L + K N+ +Y L+N G ++A + + G G P A N L+
Sbjct: 384 MDLLESVPLEGVKLNVASYRILMNCLCSRGEMDKAVGLLGLMLGRGFLPHYAASNNLL 441
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC---KPNICTYTALVNAFAREGLCEE 277
+P+T Y ++I + + + A K+ +EMR + C KPN+ TY+ L+ R G E
Sbjct: 182 RPNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMME 241
Query: 278 AEEIFEQL-QGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMV 325
A E+FE++ + I PD YN +++ + + ++ CEP+ +Y ++
Sbjct: 242 AFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLI 301
Query: 326 DAY 328
+ +
Sbjct: 302 NGH 304
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 76/178 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + +K+ + A + E+ ++ P +Y L+ C G +++A + EM++ G
Sbjct: 300 LINGHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKG 359
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN I+GL + G +A+++ + + + + + +Y +++N + A+
Sbjct: 360 CRADVVTYNLVIEGLCRDGRTVEAMDLLESVPLEGVKLNVASYRILMNCLCSRGEMDKAV 419
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L M P+ L+ G +A L AG P+ + L+E
Sbjct: 420 GLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADATMALYGLADAGFMPEARCWERLVE 477
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQG---AGIEPDVYAYNAL----------ME 302
+PN C Y L+ F R G E A ++ ++++ A ++P++ Y+ L ME
Sbjct: 182 RPNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMME 241
Query: 303 AYRLISRM--HMGCEPDRASYNIMVDAYGRAG 332
A+ L M PD+ YN+++D + R G
Sbjct: 242 AFELFEEMIEKDRIVPDQLLYNVIIDGFCRLG 273
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KAE +L+++ P++ +Y +L+ AYC G ++KA +M + GL P+ + +N+
Sbjct: 342 EKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTV 401
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I + G A +RM P+ ETY +IN YG+ + +EM
Sbjct: 402 ISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGI 461
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
KPN+ +Y +L+N ++ +AE + + G G+ P+ YN L+E A+R
Sbjct: 462 KPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFR 521
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
M G + +YN +++ GR G
Sbjct: 522 FFDEMIQSGIDATLVTYNTLINGLGRNG 549
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 12/204 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE +++ P + Y +L++A C L+ A F EM + G+ + V YN+ I+
Sbjct: 484 AEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLIN 543
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL + G +KA ++F +M C P TY +I+ Y K+ + L+L+++M+ KP
Sbjct: 544 GLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKP 603
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLI 307
+ T+ L+ A +EG+ +++F+++ + PD + YN + M+A L
Sbjct: 604 TVGTFHPLIYACRKEGVV-TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLH 662
Query: 308 SRM-HMGCEPDRASYNIMVDAYGR 330
+M G + D+ +YN ++ AY R
Sbjct: 663 QQMVDQGVDCDKVTYNSLILAYLR 686
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ AY Q+ KKA T ++ + P T+ ++ +C +G ++ AE R M +
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--------------DC---------- 219
G+ P+ YNS I+G + G+ + E M + +C
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484
Query: 220 -----------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
P+ E Y ++I SK A + F+EM + TY L+N
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
R G ++AE++F Q+ G G PDV YN+L+ Y
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI YGQK H F +L+ +D I P +Y L+ C L AE V +M
Sbjct: 436 LINGYGQKG-HFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+A +YN I+ + A F M + + TY +IN G+ + A
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKA 554
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF +M C P++ TY +L++ +A+ ++ E++++++ GI+P V ++ L+ A
Sbjct: 555 EDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA 614
Query: 304 YR----------LISRMHMGCEPDRASYNIMVDAYGRAG 332
R + M PD+ YN M+ +Y G
Sbjct: 615 CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDG 653
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIEA S K A + E++ S T TY L+ +G ++KAE +F +M
Sbjct: 505 MLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGK 564
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + YNS I G K N QK +E++ +MK +P+ T+ +I K M
Sbjct: 565 GCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMD 624
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+F EM P+ Y ++ ++A +G +A + +Q+ G++ D YN+L+ A
Sbjct: 625 -KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILA 683
Query: 304 Y---RLISRM-HM-------GCEPDRASYNIMV 325
Y R +S + H+ G P +YNI++
Sbjct: 684 YLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY +LL C G +EKAE V ++ + G+ PS + YN ++ + G+ +KA+ +
Sbjct: 325 ERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTE 384
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
+M+ +P+ T+ +I+ + + + A M P + TY +L+N + ++G
Sbjct: 385 QMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKG 444
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYN 322
E +++ AGI+P+V +Y +L+ L + G P+ YN
Sbjct: 445 HFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYN 504
Query: 323 IMVDA 327
++++A
Sbjct: 505 MLIEA 509
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 39/236 (16%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+K + +++DS P Y ++A M L+K + + M K G+ PS YN
Sbjct: 139 EKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLV 198
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ GL K + A ++F M + P+T TY +I+ Y K AL M+
Sbjct: 199 LGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNV 258
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP----------------------- 292
+ N+ TY +L+N G ++A E+ +++G+G P
Sbjct: 259 ECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDG 318
Query: 293 -----DVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
D Y L+ + R+ G P + SYNI+V+AY + G
Sbjct: 319 KEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG 374
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 10/191 (5%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D ++ + VS +L EA S +K F +P+ + LL+ S EK
Sbjct: 91 DNLLWLCSVSKMLDEATDLYSTMRKDGF----------VPSTRSVNRLLRTLVDSRHFEK 140
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
AVF ++ G P AV Y + + + K E+ + M +D PS Y L++
Sbjct: 141 TLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLG 200
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
K + A KLF+EM PN TY L++ + + G EEA E+++ +E
Sbjct: 201 GLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVEC 260
Query: 293 DVYAYNALMEA 303
++ YN+L+
Sbjct: 261 NLVTYNSLLNG 271
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 14/156 (8%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L +P + Y ++ +Y G + KA ++ ++M G+ V YNS I L+
Sbjct: 627 FQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLR 686
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN-------EMRSHK 254
+ + MK P +TY ++I K LK FN EM
Sbjct: 687 DRRVSEIKHLVDDMKAKGLVPKVDTYNILI-------KGLCDLKDFNGAYFWYREMVERG 739
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
N+ L++ EG+ EA+ + +L G+
Sbjct: 740 LLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
+S +L++A ++ MRK G PS N + L+ + +K + +F + +P
Sbjct: 99 VSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAV 158
Query: 226 TYTLMINLYGKASKSFMALK-------LFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
Y GKA ++ + LK L M P++ Y ++ + ++A
Sbjct: 159 AY-------GKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDA 211
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAY 304
++F+++ + P+ YN L++ Y
Sbjct: 212 RKLFDEMIQRNMVPNTVTYNTLIDGY 237
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/137 (20%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A +++ M++D PST + ++ + L +F ++ +P+ Y V
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
A ++ E+ + + G+ P V+AYN ++ +A +L M
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 316 PDRASYNIMVDAYGRAG 332
P+ +YN ++D Y + G
Sbjct: 225 PNTVTYNTLIDGYCKVG 241
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+ K DP V+ I + G L A + ++ C P T+ L+K Y M
Sbjct: 276 VEKGIDPNVITYSTVISSLSGIGNVEL---ALAVWAKMFVRGCSPNVYTFTSLMKGYFMR 332
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G + +A ++ M + G P+ V YN+ I GL G +AV + +M+R+ C P+ TY
Sbjct: 333 GRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTY 392
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I+ + KA A +++N+M ++ C PN+ YT++VN R + +A + E++
Sbjct: 393 GALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMST 452
Query: 288 AGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDA 327
P+ +N ++ A L +M GC P+ +YN ++D
Sbjct: 453 DNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDG 503
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ + +G L A ++ +M G P+ VVY S ++ L + +A
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M D C P+T T+ I + + A+ LF +M + C PNI TY +++
Sbjct: 445 SLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
+E +EA E+ +++ G+E ++ YN + EA +L+ +M + G +PD
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564
Query: 319 ASYNIMVDAYGRAG 332
+YN + AY G
Sbjct: 565 ITYNTLTYAYCMQG 578
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+ED + ++ Y GL E+A +F +R++G P+ +YN +D +L Q I+
Sbjct: 113 SEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIY 172
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
MKRD +P+ TY +++ K ++ A KL EM + C+P++ +YT ++++ ++
Sbjct: 173 SNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKL 232
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G EEA E+ + Q P+V YNAL+ E + L+ +M G +P+ +Y
Sbjct: 233 GKVEEARELSIRFQ-----PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITY 287
Query: 322 NIMVDAYGRAG 332
+ ++ + G
Sbjct: 288 STVISSLSGIG 298
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A + +++ + CIP Y ++ C S + +A ++ +M
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ V +N++I GL G + A+ +F +M++ C P+ +TY +++ K ++ AL
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL 514
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L EM + N+ TY + F G EEA ++ ++ G++PD YN L AY
Sbjct: 515 ELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 112 WDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
W+ ++ C+ + ++ + S+ +A ++ C P T+ +K C
Sbjct: 412 WNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCC 471
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
SG +E A +F +M +YG P+ YN +DGLLK ++A+E+ M+ + + T
Sbjct: 472 SGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVT 531
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y + + K ALKL +M KP+ TY L A+ +G + A ++ ++L
Sbjct: 532 YNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLS 591
Query: 287 GAG-IEPDVYAYNALM 301
G P+V AY +L+
Sbjct: 592 AGGKWVPEVAAYTSLL 607
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L R P Y L+ +C +++ + +M + G+ P+ + Y++ I L GN
Sbjct: 241 LSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNV 300
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ A+ ++ +M C P+ T+T ++ Y + AL ++N M +PN+ Y L
Sbjct: 301 ELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTL 360
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----LIS-------RMHMGC 314
++ G EA + +++ G P+V Y AL++ + L+ M GC
Sbjct: 361 IHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGC 420
Query: 315 EPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
P+ Y MV+ R+ + ++SL+E
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQ--AWSLIE 448
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 16/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
I +I Y + L ++A + + + C PT Y LL A + E ++ M++
Sbjct: 118 INVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKR 177
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P+ YN + L K A ++ M C+P +YT +I+ K K
Sbjct: 178 DGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEE 237
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +L S + +PN+ Y AL+N F RE +E + Q+ GI+P+V Y+ ++
Sbjct: 238 AREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVIS 292
Query: 303 AYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+ I + + GC P+ ++ ++ Y G
Sbjct: 293 SLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRG 333
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T+ TY ++++ ++ + + ++M+ G+ S ++ + I+ + G ++A+++F
Sbjct: 78 TQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMF 137
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
R++ CQP+ + Y +++ ++ M +++ M+ +PN+ TY L+ A +
Sbjct: 138 YRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKN 197
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE------PDRASYNIMVD 326
+ A ++ ++ G EPDV +Y ++ + + ++ E P+ + YN +++
Sbjct: 198 NRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALIN 257
Query: 327 AYGR 330
+ R
Sbjct: 258 GFCR 261
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
Q + TY +MI G+ L +M+ + + ++N + R GL E+A +
Sbjct: 76 QHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALK 135
Query: 281 IFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYG 329
+F +++ G +P V YN L++A +R M G EP+ +YNI++ A
Sbjct: 136 MFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALC 195
Query: 330 RAGLHEGKCSYSLVELSVK 348
+ +G C LVE+S K
Sbjct: 196 KNNRVDGACKL-LVEMSNK 213
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++L +C+ KA V +EM + G+ P+ YN+ + G + G + A E F M
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+ TYT +++ +G A + A +F+EM P++ TY A++ ++
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
E A +FE++ G EP+V YN L+ L+ RM + GCEP+ +YN+M
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 325 VDAY 328
+ Y
Sbjct: 377 IRYY 380
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 17/253 (6%)
Query: 63 SPTAQQILR-FVQREVDSN-----TIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIV 116
+P A ++L+ V+R ++ N T+ F W+ L + K+ I
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF------LEMKKRDCEID 264
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+++ ++ + +G K+A + E++ +P+ TY +++ C +E A +
Sbjct: 265 VVTYTTV--VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F EM + G P+ YN I GL G + E+ QRM+ + C+P+ +TY +MI Y +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE---AEEIFEQLQGAGIEPD 293
S+ AL LF +M S C PN+ TY L++ E+ A ++ ++ G P
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPR 442
Query: 294 VYAYNALMEAYRL 306
+ +N ++ L
Sbjct: 443 KFTFNRVLNGLLL 455
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 94 ATWDDLINVSVQLRLNKK-WDPIVLMSCVSI--------LLIEAYGQKSLHKKAEFTYLE 144
+++D I+++ +L L+ W I M + I ++ E Y KA +L
Sbjct: 92 SSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLN 151
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ + C ++ +L C S +EKA +FR +R V YN ++G
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
KA+E+ + M P+ TY M+ + +A + A + F EM+ C+ ++ TYT
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
+V+ F G + A +F+++ G+ P V YNA+++ A + M G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 314 CEPDRASYNIMVDAYGRAG 332
EP+ +YN+++ AG
Sbjct: 331 YEPNVTTYNVLIRGLFHAG 349
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY +LK + +G + A F EM+K V Y + + G G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F M R+ PS TY MI + K A+ +F EM +PN+ TY
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMG 313
L+ G EE+ ++++ G EP+ YN ++ Y L +M G
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 314 -CEPDRASYNIMVDA 327
C P+ +YNI++
Sbjct: 400 DCLPNLDTYNILISG 414
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++L AE + E+ C P E TY L+L A S +E+ V +EM + G
Sbjct: 772 LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKG 831
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN+ I GL+K ++A++++ + + P+ TY +++ K+ K A
Sbjct: 832 YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAE 891
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LFNEM + C+PN Y L+N G E ++FE++ GI PD+ +Y L++
Sbjct: 892 NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTL 951
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
R++ +G EPD YN+++D G++
Sbjct: 952 CTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKS 989
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 15/190 (7%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y ++ A C G +++A AVF EM++ G+ P YNS I G LK +A+E+F M
Sbjct: 348 SYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM 407
Query: 216 KRDCCQPSTETYT--LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
+ C PS YT L IN YGK+ +S A++ + M+S P++ A++ + A G
Sbjct: 408 --NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSG 465
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYN 322
A+ +F +L+ G+ PD Y ++ EA S M GC PD + N
Sbjct: 466 RLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALN 525
Query: 323 IMVDAYGRAG 332
++D + G
Sbjct: 526 SLIDTLYKGG 535
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y L+ PT TY LL SG + AE +F EM +YG P+ +YN ++G
Sbjct: 859 YYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRI 918
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN + ++F++M P ++YT++I+ A + L F ++ +P++
Sbjct: 919 AGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIV 978
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLIS 308
Y L++ + EEA +F +++ GI P++Y YN+L+ + Y +
Sbjct: 979 YNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELL 1038
Query: 309 RMHMGCEPDRASYNIMVDAYGRAG 332
R G +P +YN ++ Y +G
Sbjct: 1039 R--KGWKPSVFTYNALIRGYSVSG 1060
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 143 LELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+L+ + + T T+A + + G L A MR+ G+ +A YN I L+K
Sbjct: 124 FDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVK 183
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A+E+++ M D PS TY++++ +GK L L NEM + KPN+ +
Sbjct: 184 SGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYS 243
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-------- 313
YT + + +EA I +++ +G +PDV + +++ R+
Sbjct: 244 YTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMK 303
Query: 314 ---CEPDRASYNIMVDAYGRAG 332
+PDR +Y ++D G +G
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSG 325
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L++ L++ AE +F EM++ G P YN +D + K ++ +++ + M
Sbjct: 768 SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEM 827
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R + + TY +I+ K+ + A+ L+ + S P CTY L++ + G
Sbjct: 828 HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKM 887
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
+AE +F ++ G EP+ YN L+ +R+ + G PD SY I+
Sbjct: 888 VDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTIL 947
Query: 325 VDAYGRAG-LHEGKCSY 340
+D AG L++G C +
Sbjct: 948 IDTLCTAGRLNDGLCYF 964
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + EL P TY +++K + ++A F +M + G P + NS ID
Sbjct: 470 AKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLID 529
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L KGG +A ++F ++K +P+ TY +++ G+ K ++L EM P
Sbjct: 530 TLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPP 589
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ TY +++ ++ G A ++ + G PD+ +YN +M EA+R+
Sbjct: 590 NLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMF 649
Query: 308 SRMHMGCEPDRASYNIMVDAYGRAGL 333
+M PD A+ ++ ++ + GL
Sbjct: 650 CQMKKILAPDYATLCTILPSFVKNGL 675
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 11/214 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+L I YG+ KA Y + +P +L + SG L A+ VF E++
Sbjct: 420 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKA 479
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P + Y I K +A+ F M C P +I+ K K
Sbjct: 480 MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNE 539
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +LF++++ K +P TY L++ REG +E ++ E++ P++ YN +++
Sbjct: 540 AWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599
Query: 303 AYR-----------LISRMHMGCEPDRASYNIMV 325
L S GC PD +SYN ++
Sbjct: 600 CLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVM 633
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I GQ + +A ++ DS C P T+ ++++ C +G L A+AVF +M+
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P V Y + +D G+ Q VE++ M D + +YT +++ + + AL
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALA 367
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY- 304
+F+EM+ P +Y +L++ F + + + A E+F + G P+ Y + + Y
Sbjct: 368 VFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 427
Query: 305 ------RLISRM-HM---GCEPDRASYNIMVDAYGRAG 332
+ I R HM G PD A+ N ++ + +G
Sbjct: 428 KSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSG 465
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%)
Query: 143 LELLD--SRCIPTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LEL + + C P+ + T+ L + Y SG KA + M+ G+ P N+ +
Sbjct: 401 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYS 460
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G A +F +K P T TYT+MI KASK+ A+ F++M C P+
Sbjct: 461 LAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPD 520
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ +L++ + G EA ++F +L+ IEP YN L+ E +L+
Sbjct: 521 VLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580
Query: 309 RMHMGC-EPDRASYNIMVDAYGRAGLHEGKCS----YSLVE 344
M P+ +YN ++D + G E C+ YS+ E
Sbjct: 581 EMTRTIYPPNLITYNTVLDCLSKNG--EVNCAIDMLYSMTE 619
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
S+L++ A+G+K + E+ P +Y + ++ + ++A + +M
Sbjct: 210 SVLMV-AFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKME 268
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P V + I L G A +F +MK +P TY +++ G + S
Sbjct: 269 DSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQ 328
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++++N M + NI +YTA+V+A + G +EA +F++++ G+ P+ Y+YN+L+
Sbjct: 329 SVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLI 388
Query: 302 EAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ L + M+ G P+ ++ + ++ YG++G
Sbjct: 389 SGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSG 430
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ C +G L FR++ + GL P +VYN IDGL K ++AV +
Sbjct: 939 PDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSL 998
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK+ P+ TY +I GKA K+ A +++ E+ KP++ TY AL+ ++
Sbjct: 999 FNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSV 1058
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G + A + Q+ G +P+ Y L
Sbjct: 1059 SGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 15/227 (6%)
Query: 125 LIEAYGQKS-LHKKAEFTYLELLDSRCIPTEDTYAL-LLKAYCMSGLLEKAEAVFREMRK 182
L+E +K+ + K EF E + SR I D + L++ C +A +F + +
Sbjct: 702 LMEGILKKAGVEKSIEFA--ENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKG 759
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ YNS I GL+ A ++F MKR C P TY L+++ GK+ +
Sbjct: 760 LGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEE 819
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
LK+ EM + TY +++ + E+A +++ L G P Y L+
Sbjct: 820 MLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLD 879
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
+A L + M GCEP+ YNI+++ + AG E C
Sbjct: 880 GLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVC 926
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ G+ ++A + E+ IP TY L+ +G +A ++ E+ +
Sbjct: 981 LLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRK 1040
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
G PS YN+ I G G+ A + +M CQP++ TY + N
Sbjct: 1041 GWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPN 1089
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P YA ++ C G E A + M YGL P+ V YN+ + G+ +KA
Sbjct: 262 CTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAE 321
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M + C T+ ++++ + + ++L +M H C P++ TYT ++N F
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EGL +EA + + + G +P+ +Y ++ +A L+SRM GC P+
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNP 441
Query: 319 ASYNIMVDAYGRAGLHE 335
++N +++ + GL E
Sbjct: 442 VTFNTIINFLCKKGLVE 458
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + AE + M + G
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG 436
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 437 CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEAL 496
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L N M + PN+ TY+++ A AREG ++ ++F+ +Q A I D YNA++
Sbjct: 497 ELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSL 556
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A ++ M GC P+ ++Y ++ GL
Sbjct: 557 CKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGL 596
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KAE E+ C + T+ +L+ +C +GL+++ + +M ++G P + Y +
Sbjct: 318 EKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 377
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ + A +L + M C
Sbjct: 378 INGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGC 437
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ ++N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 438 LPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALE 497
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ +Y+ M A R G
Sbjct: 498 LLNVMINKGITPNVITYSSMAFALAREG 525
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 35/183 (19%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++ C+P T+ ++ C GL+E+A + ++M G P + Y++ ID
Sbjct: 425 AEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVID 484
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM--------------------------- 230
GL K G ++A+E+ M P+ TY+ M
Sbjct: 485 GLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRS 544
Query: 231 --------INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
I+ K ++ +A+ M S+ C PN TYTAL+ A EGL EA+++
Sbjct: 545 DAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLL 604
Query: 283 EQL 285
+L
Sbjct: 605 SEL 607
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ C+P Y +++++ C SG A V + G N I+ + G
Sbjct: 141 EMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQG 200
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE----------MRSH 253
+ +E+ +++ C+ +Y ++ A + +L +E M H
Sbjct: 201 CVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH 260
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
C P+I Y +++ +EG E A EI ++ G++P+V YN ++ +A
Sbjct: 261 GCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKA 320
Query: 304 YRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
L++ M+ C D ++NI+VD + + GL
Sbjct: 321 EELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 24/200 (12%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC G + EA R +PP+A Y + GL G A+ + M
Sbjct: 87 YNAMVAGYCRVG---QVEAARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMT 143
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P Y ++I ++ AL++ + + + ++NA +G +
Sbjct: 144 SRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD 203
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA--------------------YRLISRM-HMGCE 315
E E+ +L G E D+ +YNA+++ + +S+M GC
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263
Query: 316 PDRASYNIMVDAYGRAGLHE 335
PD Y ++D + G HE
Sbjct: 264 PDIRMYATIIDGICKEGHHE 283
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ G+ ++A +++ P TY+ + A G ++K +F ++
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDAT 541
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-- 242
+ AV+YN+ I L K A++ M + C P+ TYT +I G AS+ +
Sbjct: 542 IRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIK--GLASEGLLCE 599
Query: 243 ALKLFNEMRSHK 254
A L +E+ S +
Sbjct: 600 AQDLLSELCSRR 611
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 63 SPTAQQILRFVQREVDSNTI-----WDAF---DSLPPTHATWDDLINVSVQLRLNKKWDP 114
S +Q + ++++++ N + DAF +DD+I S+ DP
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI--------DP 363
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ L+ + KA+ + ++ C P TY L+K +C S +E
Sbjct: 364 DIFTYNS---LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+FREM GL V Y + I GL G+ A ++F++M D P TY+++++
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K AL++F+ M+ + K +I YT ++ + G ++ ++F L G++P+V
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
YN ++ EAY L+ +M G P+ +YN ++ A+ R G
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 134 LHKKA-EFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
LH KA E L ++ C P TY +++ C G + A + +M + V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLF 247
++N+ ID L K + A+ +F+ M+ +P+ TY+ +I+ YG+ S A +L
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD---ASQLL 318
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI 307
++M K PN+ T+ AL++AF +EG EAE++++ + I+PD++ YN+L+ + +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 308 SRMHMG-----------CEPDRASYNIMVDAYGRA 331
R+ C PD +YN ++ + ++
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T + LL YC + A A+ +M + G P + + + I GL +AV +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + CQP+ TY +++N K + +AL L N+M + K + ++ + ++++ +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F++++ GI P+V Y++L+ +A +L+S M P+ +
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 321 YNIMVDAYGRAG 332
+N ++DA+ + G
Sbjct: 333 FNALIDAFVKEG 344
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
NTI D+ + DD +N+ ++ K P V+ I + +YG+ S A
Sbjct: 264 NTIIDSL----CKYRHVDDALNLFKEME-TKGIRPNVVTYSSLISCLCSYGRWS---DAS 315
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
++++ + P T+ L+ A+ G +AE ++ +M K + P YNS ++G
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
KA ++F+ M C P TY +I + K+ + +LF EM +
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
TYT L+ +G C+ A+++F+Q+ G+ PD+ Y+ L++
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C + A A+ +M K G PS V +S ++G G AV + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+P T T+T +I+ L+ KAS+ A+ L + M C+PN+ TY +VN +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASY 321
G + A + +++ A IE DV +N ++ +A L M G P+ +Y
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 322 NIMVD---AYGR 330
+ ++ +YGR
Sbjct: 299 SSLISCLCSYGR 310
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 15/193 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ ++ + C ++ A +F+EM G+ P+ V Y+S I L G A ++ M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T+ +I+ + K K A KL+++M P+I TY +LVN F +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
+A+++FE + PDV YN L++ + L M H G D +Y ++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 326 DAYGRAGLHEGKC 338
H+G C
Sbjct: 443 QGL----FHDGDC 451
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + +++ P TY++LL C +G LEKA VF M+K + +Y + I+
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKC 255
G+ K G ++F + +P+ TY MI+ G SK + A L +M+
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS--GLCSKRLLQEAYALLKKMKEDGP 571
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
PN TY L+ A R+G + E+ +++
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G ++ +F + G+ P+ V YN+ I GL Q+A + ++MK
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
D P++ TY +I + + + +L EMRS
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 11/194 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ SR +P+ + LL A + ++ +M++ + YN I+ +
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+ + +M + +PS T + ++N Y + A+ L ++M +P+ T+T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG- 313
L++ EA + +++ G +P++ Y ++ A L+++M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 314 CEPDRASYNIMVDA 327
E D +N ++D+
Sbjct: 256 IEADVVIFNTIIDS 269
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ +F M + PS + +++ K K + + L +M+ + + TY L+N
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEP 316
F R A + ++ G EP + ++L+ Y L+ +M MG P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 317 DRASYNIMV 325
D ++ ++
Sbjct: 189 DTITFTTLI 197
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 31/227 (13%)
Query: 140 FTYLELLDSRC--------------------IPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
FTY LLD+ C +P TY+ ++ Y +G L++A +F E
Sbjct: 327 FTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE 386
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ + V YN+ + K G ++A+ + + M+ + TY ++ YGK K
Sbjct: 387 MKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 446
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
++F EM++ + PN+ TY+ L++ +++ GL +EA E+F + + AG++ DV Y+A
Sbjct: 447 YEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSA 506
Query: 300 LMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L++A L G P+ +YN ++DA+GR+G E
Sbjct: 507 LIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE 553
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + +A + E+L + P T+ LL GL E A +F EM
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYR 320
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN+ +D + KGG A +I M R P+ TY+ +I+ Y KA + A
Sbjct: 321 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 380
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LFNEM+ + +Y L++ +A+ G EEA + ++++ +GI+ D YNAL+
Sbjct: 381 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 440
Query: 304 ------YRLISRM--HMGCE---PDRASYNIMVDAYGRAGLHE 335
Y + R+ M E P+ +Y+ ++D Y + GL++
Sbjct: 441 YGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQ 483
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 47/226 (20%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRM 215
++ L+ AY SG ++A VF M+ GL P+ V YN+ ID KGG + +A EIF M
Sbjct: 223 FSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEM 282
Query: 216 KRDCCQPSTETYTLMINLYG-----------------------------------KASKS 240
R+ QP T+ ++ + G K +
Sbjct: 283 LRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQM 342
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+A ++ +EM PN+ TY+ +++ +A+ G +EA +F +++ A I D +YN L
Sbjct: 343 DLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTL 402
Query: 301 MEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
+ Y + R G + D +YN ++ YG+ G +E
Sbjct: 403 LSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYE 448
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG++ +++ + + E+ R P TY+ L+ Y GL ++A VFRE +K G
Sbjct: 437 LLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 496
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L V+Y++ ID L K G + AV M ++ +P+ TY +I+ +G++ +
Sbjct: 497 LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSA 552
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 20/195 (10%)
Query: 155 DTYALLLKAYCMSGLLEKAE-----AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
D Y LL+ G KA AV RE R+ + ++ I L + G + A
Sbjct: 149 DDYTFLLRELGNRGEWAKAIRCFEFAVRREQRR---NEQGKLASAMISILGRLGQVELAK 205
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ + + ++ +I+ YG++ A+K+F M+S KPN+ TY A+++A
Sbjct: 206 NVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDAC 265
Query: 270 AREGL-CEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYR-LISRM-HMGCEPD 317
+ G+ A EIF+++ G++PD +N+L+ EA R L S M + G E D
Sbjct: 266 GKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQD 325
Query: 318 RASYNIMVDAYGRAG 332
+YN ++DA + G
Sbjct: 326 IFTYNTLLDAVCKGG 340
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 38/250 (15%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + L+++A + E + Y+ L+ A C +GL+E A + EM K G
Sbjct: 472 LIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG 531
Query: 185 LPPSAVVYNSYIDGLLKGGNP--------QKAVEIFQRMKRDCCQPSTETYT------LM 230
+ P+ V YNS ID + G+ + V + +TE+ +
Sbjct: 532 IRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQI 591
Query: 231 INLYGK--ASKSFMA-------------LKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
I ++G+ A K+ A L +F++M KPN+ T++A++NA +R
Sbjct: 592 IKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSF 651
Query: 276 EEAEEIFEQL-----QGAGIEPDV---YAYNALMEAYRLISRM-HMGCEPDRASYNIMVD 326
E+A + E+L Q G+ + Y N ++A L + M A YN + D
Sbjct: 652 EDASMLLEELRLFDNQVYGVAHGLLMGYGDNVWVQAQSLFDEVKQMDSSTASAFYNALTD 711
Query: 327 AYGRAGLHEG 336
G G
Sbjct: 712 MLWHFGQRRG 721
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI++ G+ + +A +F + + ++AL++A+ R G C+EA ++FE ++ +G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 290 IEPDVYAYNALME-----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++P++ YNA+++ A + M G +PDR ++N ++ GR GL E
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEA 309
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y L+ C L +AE++FR+M+ G+ P+ YN +DG K N ++A+ +
Sbjct: 219 PTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHL 278
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+Q M D QP+ T+ ++I+ K + A + F +M PN+ + +L++ +++
Sbjct: 279 YQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSK 338
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G C EA ++ +++ I PDV+ Y+ L+ EA ++ RM G +
Sbjct: 339 AGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVV 398
Query: 321 YNIMVDAYGRAGLHE 335
YN ++D Y + G E
Sbjct: 399 YNSLIDGYCKEGNME 413
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 134 LHKKAEF-----TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L KK+ F Y ++ R PT TY +L+ A C G + +A+++ EM K G+ P+
Sbjct: 161 LLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPT 220
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V+Y + I GL +A +F++MK P+ TY ++++ Y K + AL L+
Sbjct: 221 VVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQ 280
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR--- 305
M +PN+ T+ L++A + A F Q+ G+ P+V +N+L++ Y
Sbjct: 281 GMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAG 340
Query: 306 --------LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L+ PD +Y+I++ R G E
Sbjct: 341 NCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVE 378
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 38/309 (12%)
Query: 57 GIFPVLSPTAQQILRFVQREVDSNTIWDAFDS-----LPPTHATWDDLINVSVQ----LR 107
G FP + +L + ++ + +W+ +++ L PT T++ L++ + LR
Sbjct: 146 GAFPAVQ-ACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLR 204
Query: 108 --------LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL 159
+ K +P V+ + LI +S +AE + ++ DS P TY +
Sbjct: 205 AKSLISEMVKKGIEPTVV---IYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNV 261
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ YC + +++A +++ M GL P+ V + ID L K A F +M +
Sbjct: 262 LMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFG 321
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P+ + +I+ Y KA A L EM K P++ TY+ L+ R G EEA+
Sbjct: 322 VVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEAD 381
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAY----------------RLISRMHM-GCEPDRASYN 322
+I ++++ G+ + YN+L++ Y + S M G PD +Y
Sbjct: 382 DILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYA 441
Query: 323 IMVDAYGRA 331
+M+ + A
Sbjct: 442 VMLQGHLNA 450
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ +L+ A+ GL+++A R K G P+ N+ ++GLLK + E++ M
Sbjct: 121 VFGVLIIAFSEVGLVDEA---LRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNM 177
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TY ++++ + A L +EM +P + YT L++ E
Sbjct: 178 VSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKL 237
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRASYNIM 324
EAE +F Q++ +G+ P++Y YN LM+ Y + +H+ G +P+ ++ I+
Sbjct: 238 MEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGIL 297
Query: 325 VDA 327
+DA
Sbjct: 298 IDA 300
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y++L+ +G + +F M++ G A YN+ +DG K G KA E
Sbjct: 560 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 619
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + MK C QP+ TY +++ K + A LF E +S + N+ Y++L++ F
Sbjct: 620 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 679
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRA 319
+ G +EA I E++ G+ P+VY +N+L++A S M C P+
Sbjct: 680 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 739
Query: 320 SYNIMVDAYGR 330
+Y+I+++ R
Sbjct: 740 TYSILINGLCR 750
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L+ + G +++A + EM K GL P+ +NS +D L+K +A+ FQ MK
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 730
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P+T TY+++IN + K A + +M+ PN+ TYT +++ A+ G
Sbjct: 731 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 790
Query: 277 EAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRMHM-GCEPDRASYNIMV 325
+A +FE+ + G PD ++NAL MEAY++ + GC + S ++
Sbjct: 791 DAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLL 850
Query: 326 DAYGRA 331
DA ++
Sbjct: 851 DALNKS 856
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +L+ A + E+A + R+M++ G ++ + + L + G A+ +
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+K C +P Y + I+ +GKA MA K F+E+++ KP+ +YT+++ +
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCK 296
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EAEE+F Q++ P YAYN ++ +AY+L+ R+ GC P S
Sbjct: 297 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 356
Query: 321 YNIMVDAYGR 330
+N ++ G+
Sbjct: 357 FNSILTCLGK 366
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 134 LHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
+HK E LE + +C+ PT TY ++ L++A +F E + G+ + V+Y
Sbjct: 614 VHKAYEI--LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 671
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+S IDG K G +A I + M + P+ T+ +++ KA + AL F M+
Sbjct: 672 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
KC PN TY+ L+N R +A ++ +Q G+ P+V Y ++ +
Sbjct: 732 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 791
Query: 303 AYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
AY L R G PD AS+N +++ A
Sbjct: 792 AYSLFERFKANGGIPDAASFNALIEGMSNA 821
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +Y ++ C +G L +AE +F +M P A YN+ I G G + A ++
Sbjct: 282 PDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 341
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+R++ C PS ++ ++ GK K AL LF M+ +PN TY +++
Sbjct: 342 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCL 400
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI-SRMHMGCEPDRAS 320
G EEA I ++++ A + P++ N ++ EAY++ S GC PD +
Sbjct: 401 GGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT 460
Query: 321 YNIMVDAYGRAG 332
Y ++D G+ G
Sbjct: 461 YCSLIDGLGKKG 472
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ G+K +A + ++LD+ Y L++ + + G E +F+E+ + G
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 523
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + N+Y+D + K G +K IF+ ++ P +Y+++I+ KA ++
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 583
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+ M+ + Y A+V+ F + G +A EI E+++ ++P V Y A+++
Sbjct: 584 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
I R+ G E + Y+ ++D +G+ G
Sbjct: 644 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 682
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ E++ P TY +++ C+ G +E+A + EM L P+ + N +D L
Sbjct: 374 LSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 433
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K ++A +IF+ + C P TY +I+ GK + A +LF +M N
Sbjct: 434 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 493
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYRLISR- 309
YT+L+ F G E+ +IF++L G +PD+ N M E R+I
Sbjct: 494 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 553
Query: 310 -MHMGCEPDRASYNIMVDAYGRAG 332
G PD SY+I++ +AG
Sbjct: 554 IRSYGFLPDVRSYSILIHGLTKAG 577
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I YG + A + LE L R CIP+ ++ +L +++A ++F M+K
Sbjct: 325 MIMGYGSAGRFEDA-YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD 383
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P S+ YN ID L GG ++A I M+ P+ T +M++ KA K A
Sbjct: 384 AEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 442
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+F C P+ TY +L++ ++G +EA +FE++ AG + Y +L+
Sbjct: 443 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 502
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
+ + R + GC+PD N +D +AG
Sbjct: 503 FFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + + + +G ++ A F E++ GL P V Y S I L K G +A E+F +M+
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P Y MI YG A + A KL +R C P++ ++ +++ ++ +
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 371
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA +FE ++ EP+ YN ++ EAYR++ M H P+ + NIMV
Sbjct: 372 EALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 430
Query: 326 DAYGRA 331
D +A
Sbjct: 431 DRLCKA 436
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ G +++A +F +M G + VVY S I G +
Sbjct: 454 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 513
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+IF+ + R C+P ++ KA + +F ++RS+ P++ +Y+ L++
Sbjct: 514 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGC-EPDR 318
+ G E IF ++ G D AYNA+++ AY ++ M C +P
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633
Query: 319 ASYNIMVDAYGR 330
A+Y +VD +
Sbjct: 634 ATYGAIVDGLAK 645
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A + +A + + + +C P TY++L+ C KA +++M+K G
Sbjct: 709 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 768
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + I GL K GN A +F+R K + P ++ +I A+++ A
Sbjct: 769 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 828
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
++F E R C+ NI + +L++A + E+A
Sbjct: 829 QVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +G+ +A E++ P T+ LL A + + +A F+ M++
Sbjct: 674 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 733
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ Y+ I+GL + KA +Q M++ P+ TYT MI+ K A
Sbjct: 734 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 793
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF +++ P+ ++ AL+ + EA ++FE+ + G ++ + +L++A
Sbjct: 794 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDA 852
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + +AE +YL+ + C P +Y +++ YC + +EKA A REM + G
Sbjct: 16 LISCLCKAGMLAEAE-SYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 74
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ Y+S + K GN KA+++F M C+P + ++++ +A K A
Sbjct: 75 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 134
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF M S CKP++ TY ++ + +EA + E+++ + P Y L+
Sbjct: 135 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 194
Query: 302 -------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
+AY + +M G C +Y+++ + RAG
Sbjct: 195 CKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAG 233
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + GL P+A++YN+ I L K G +A +RM + C P+ +Y ++I+ Y KA
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARN 59
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL EM P Y+++V +F + G +A ++F ++ G EPD+ +N
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 300 LM----------EAYRLISRMH-MGCEPDRASYNIMV 325
L+ EA L M+ GC+PD +YN M+
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMI 156
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ Y + +KA E+ + PT Y+ +++++C +G + KA VF EM
Sbjct: 49 IIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAK 108
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V +N + GL + +A E+F+ M C+P TY MI K K A
Sbjct: 109 GCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEA 168
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG---AGIEPDVYA-YNA 299
+ L M+ P TYT L++ + ++A E+FE++ A EP +N
Sbjct: 169 VFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNK 228
Query: 300 LMEAYRLI 307
L A +L+
Sbjct: 229 LQRAGKLV 236
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + P Y++L+ C + +A+ +F+EMR G+ P+ V YN+ ++GLL
Sbjct: 280 EMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTA 339
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q A+E+ M P T +Y LMI + + A LF +M N TY
Sbjct: 340 KLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYN 399
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIE----PDVYAYNALM----------EAYRLISR 309
++ F ++ A +F+++Q + P+++ Y L+ EA++L+S
Sbjct: 400 FMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 459
Query: 310 MH-MGCEPDRASYNIMVDAYGRAG 332
M G P + +++ RAG
Sbjct: 460 MRDKGFVPSLKIWEVLLSRLARAG 483
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++++ + KA + E+ C P + +LL + + +A +FR M G
Sbjct: 85 IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 144
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN+ I GL K +AV + +RMK++ P+ TYT +I+ K ++ A
Sbjct: 145 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAY 204
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL--QGAGIEPDVYAYNAL-- 300
++F +M C Y+ L N R G EA ++ + + + + Y+ L
Sbjct: 205 EVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGL 264
Query: 301 -------MEAYRLISRMHMG--CEPDRASYNIMVDAYGRA 331
+EA +L++ M MG PD +Y+I+++ +A
Sbjct: 265 SKMDGGNVEAAKLVTEM-MGKKIAPDFYAYSILINGLCKA 303
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYC-MSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A Y ++ T++TY+L++ M G +A + EM + P Y+
Sbjct: 237 EASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSIL 296
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+GL K P +A E+FQ M+ P+ TY ++ +K A++L M
Sbjct: 297 INGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGR 356
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+ C+Y ++ F G EA +F+ + GI + + YN ++ A+
Sbjct: 357 LPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWM 416
Query: 306 LISRMHMGCE-----PDRASYNIMVDA 327
L RM G P+ +Y I++ +
Sbjct: 417 LFKRMQSGKNDKVPAPNMFTYEILISS 443
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ + C + +E+A + MR G PS ++ + L + G A E+
Sbjct: 432 PNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFEL 491
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M R CQ + ++++ + A +M P+ TY LV
Sbjct: 492 YKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCW 551
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+G ++A ++ E+L G P+ L+ A
Sbjct: 552 QGKADQARKLVEELVRDGKRPENQGLRQLLGA 583
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D +P+ + +LL +G L+ A +++EM + N +DG+L+ G+
Sbjct: 462 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVD 521
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + ++M P TY ++ K+ A KL E+ +P L+
Sbjct: 522 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLL 581
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
A +G + A E + L G+E + +N L+ +
Sbjct: 582 GALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTS 618
>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
Length = 496
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY---GLPPSAVVYNSYIDGLLKGGNPQKA 208
P Y +L+K Y +G LE A V EMR+Y + P+ V Y++ I GL +GG ++A
Sbjct: 180 PNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEA 239
Query: 209 VEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
E+F+ M ++D P Y ++I+ + + + A +F MR ++C+PN Y L+N
Sbjct: 240 FELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLIN 299
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
++ E A +FE+++ +G+EPD +Y AL+ E L+ M GC
Sbjct: 300 GHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRA 359
Query: 317 DRASYNIMVDAYGRAG 332
D +YN++++ + G
Sbjct: 360 DVVTYNLVIEGLCKDG 375
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 15/223 (6%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI---PTEDTYALLLKAYCMSGLLEKAEA 175
+CV +L++ Y + + A E+ + C P TY+ L+ C G +++A
Sbjct: 182 TCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEAFE 241
Query: 176 VFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F EM K + P ++YN IDG + G KA IF M+++ C+P+T Y +IN +
Sbjct: 242 LFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLINGH 301
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A +F EMR+ +P+ +YTAL+ R G +E + +++ G DV
Sbjct: 302 CKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRADV 361
Query: 295 YAYNALMEAY----RLISRMHM-------GCEPDRASYNIMVD 326
YN ++E R + M + G + + ASY I+++
Sbjct: 362 VTYNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASYRILMN 404
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + ++ KA + + + C P YA L+ +C +E A +VF EMR
Sbjct: 261 VIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLINGHCKKADIEAARSVFEEMRNS 320
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P AV Y + I L + G+ + + + MK C+ TY L+I K ++ A
Sbjct: 321 GVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRADVVTYNLVIEGLCKDGRTVEA 380
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ L + K N+ +Y L+N G + A + + G G P A N L+
Sbjct: 381 MGLLESVPLEGVKLNVASYRILMNCLCSRGEMDRAVGLLGLMLGRGFLPHYAASNNLL 438
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC---KPNICTYTALVNAFAREGLCEE 277
+P+T Y +++ Y K + A K+ +EMR + C KPN+ TY+ L+ R G +E
Sbjct: 179 RPNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKE 238
Query: 278 AEEIFEQL-QGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMV 325
A E+FE++ + I PD YN +++ + ++ CEP+ +Y ++
Sbjct: 239 AFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLI 298
Query: 326 DAY 328
+ +
Sbjct: 299 NGH 301
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 75/179 (41%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + +K+ + A + E+ +S P +Y L+ C G +++ + EM++ G
Sbjct: 297 LINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKG 356
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN I+GL K G +A+ + + + + + + +Y +++N + A+
Sbjct: 357 CRADVVTYNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASYRILMNCLCSRGEMDRAV 416
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L M P+ L+ G +A L AG P+ + L+E+
Sbjct: 417 GLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADATMALYGLADAGFMPEPRCWERLVES 475
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 141 TYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
TYL + R + P T+ + Y +G + +A F EM +GL P+ +Y I+G
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K GN +A+ IF+R+ P +T + I+ K + ALK+F+E++ P++
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
TY++L++ F ++G E+A E+ +++ GI P+++ YNAL++ A +L
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708
Query: 310 M-HMGCEPDRASYNIMVDAYGRA 331
M G EPD +Y+ M+D Y ++
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKS 731
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ EL + +P TY+ L+ +C G +EKA + EM G+ P+ +YN+ +DGL
Sbjct: 635 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 694
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G+ Q+A ++F M +P + TY+ MI+ Y K+ A LF+EM S +P+
Sbjct: 695 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RL 306
Y ALV+ +EG E+A +F ++ G + ++N L++ Y +
Sbjct: 755 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM 813
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
I++ M PD +Y ++D + +AG E
Sbjct: 814 IAKQIM---PDHVTYTTVIDWHCKAGKME 839
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + +A + E+LD +P Y +L+ + +G L +A ++FR + G
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P +++I GLLK G Q+A+++F +K P TY+ +I+ + K + A
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +EM PNI Y ALV+ + G + A ++F+ + G+EPD Y+ ++
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA+ L M G +P YN +V + G
Sbjct: 729 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C G +EKA + + M G P++ + I+G + N +A+E+ M
Sbjct: 370 TYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 429
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ PS +Y MIN +A KL +M KPN+ Y+ L+ A+A EG
Sbjct: 430 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRI 489
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
EEA + + + +G+ PD++ YNA++ +M G +PD ++
Sbjct: 490 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 549
Query: 325 VDAYGRAG 332
+ Y + G
Sbjct: 550 ILGYSKTG 557
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ LL++ YC + +A + EM K L PSAV Y + I+GL + A
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M +P+ Y+++I Y + A +L + M P+I Y A+++
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 518
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
++ G EEA ++QG G++PD + A + Y +M G P+
Sbjct: 519 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 578
Query: 319 ASYNIMVDAYGRAG 332
Y ++++ + +AG
Sbjct: 579 PLYTVLINGHFKAG 592
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ T+ E+ + P + + L+ + G +++ + M G+P + + YN I
Sbjct: 316 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 375
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL K G +KA EI + M C+P++ T+ L+I Y + AL+L +EM
Sbjct: 376 HGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 435
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P+ +Y A++N A ++ E++ +G++P+V Y+ L+ AY RL
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
+ M G PD YN ++ +AG E +Y L
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 532
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y +LD++ TY L+ A C +G L A+ V EM + GL P+ +Y+ I+G+
Sbjct: 215 VYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMC 274
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ +AVE+ + M P+T TYT++ +A + A F EM+ KP+
Sbjct: 275 QVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYN 334
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--------- 311
+AL++ F REG +E I + + GI ++ YN L+ +M
Sbjct: 335 ACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 394
Query: 312 --MGCEPDRASYNIMVDAYGR 330
+GC+P+ ++ ++++ Y R
Sbjct: 395 VTLGCKPNSRTFCLLIEGYCR 415
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
+LI AY + ++A LLD S P Y ++ +G +E+A E
Sbjct: 478 ILIMAYASEGRIEEAR----RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 533
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
++ GL P AV + ++I G K G +A + F M P+ YT++IN + KA
Sbjct: 534 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 593
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL +F + + P++ T +A ++ + G +EA ++F +L+ G+ PDV+ Y++
Sbjct: 594 LMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 653
Query: 300 LM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ +A+ L M + G P+ YN +VD ++G
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSG 697
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y++L+ AY G +E+A + M G+ P YN+ I L K G ++A
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ +P T+ I Y K K A K F+EM H PN YT L+N +
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EA IF +L G+ PDV +A + EA ++ S + G PD +
Sbjct: 591 AGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 321 YNIMVDAYGRAG-------LHEGKC 338
Y+ ++ + + G LH+ C
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMC 675
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + +A + E+ P Y L+ C G +EKA +FREM + G
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + +N+ IDG K Q+A ++FQ M P TYT +I+ + KA K A
Sbjct: 784 FA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 842
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD-------VYAY 297
LF EM+ + TYT+L+ + + G E +FE++ G++PD +YA+
Sbjct: 843 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 902
Query: 298 ---NALMEAYRL 306
+ L+EA++L
Sbjct: 903 CKEDNLVEAFKL 914
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA + E+L + T ++ L+ YC S +++A +F+EM + P V Y +
Sbjct: 770 EKAMNLFREML-QKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 828
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G ++A +F+ M+ T TYT ++ Y K +S LF +M +
Sbjct: 829 IDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGV 888
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
KP+ TY ++ A +E EA ++ +++ G G+ ++ L+ EA +
Sbjct: 889 KPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASK 948
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ M +G +P A+ N +V ++ AG
Sbjct: 949 LLDEMGELGLKPSLAACNTLVRSFHEAG 976
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + ++A + E++ + +P TY ++ +C +G +E+A +F+EM++
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 852
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V Y S + G K G + +F++M +P TY L+I + K A
Sbjct: 853 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 912
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL +E+ + L+ A + EA ++ +++ G++P + A N L+ ++
Sbjct: 913 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSF 972
Query: 305 RLISRM 310
+M
Sbjct: 973 HEAGKM 978
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ +L+ +Y G+L++A VF + + S + NS + LLK G + +++ M
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
TYT ++ K A ++ EM PN Y+ ++ + G
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
+EA E+ + G+ P+ Y Y + RM+ G +PD + + +
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339
Query: 325 VDAYGRAG 332
+D + R G
Sbjct: 340 IDGFMREG 347
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 129 YGQKSLHKKAE-FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
YG L + +E F E + ++ + P E TY L++ A+C L +A + E+ G+
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
+++ I L K + +A ++ M +PS ++ + +A K A ++
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
F ++S P+ T LVN + E+A + +QL
Sbjct: 985 FEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y ++ C G +KA + R M + P+ Y ID K G A
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGAT 233
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ MK+ P TY+ +I+ K S+ LF EM PN+CT+ ++++
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL-----------ISRMHMGCEPDR 318
+EG E+AEEI + G++PDV YN +++ Y L S ++ EPD
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI 353
Query: 319 ASYNIMVDAYGR 330
SYNI+++ Y R
Sbjct: 354 ISYNILINGYAR 365
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 11/228 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+A+ + + A E+ P TY+ L+ A C E +F EM
Sbjct: 218 IVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL 277
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ +NS IDGL K G + A EI + M P TY ++I+ YG + A
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F+ M + +P+I +Y L+N +AR+ +EA ++ ++ G++P + N L+
Sbjct: 338 REIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ R + G PD ++ ++ Y + GL E S+
Sbjct: 398 LFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSH 445
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ YG + +A + +++ P +Y +L+ Y +++A V RE+ +
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK 382
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS V N + GL + G + A F M P T+ ++ Y K A
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ F+++ + NI YTA+++ + G ++A FE+L G+ PDV Y A++
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA ++ +M GC D +YN++V + R+
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
Query: 151 IPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
IP + ++++ + C+ + +V K G+P + V + + I GL + AV
Sbjct: 103 IPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAV 162
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+++ R+ C+P+ Y ++N K + A L M KPN TYT +++A
Sbjct: 163 HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDA 222
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPD 317
F ++G+ + A + +++ I PD++ Y+ L++A +S+ +H+ P+
Sbjct: 223 FCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPN 282
Query: 318 RASYNIMVDAYGRAG 332
++N ++D + G
Sbjct: 283 VCTFNSVIDGLCKEG 297
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A+ + E+L + IP T+ LL Y +GL+E+A + F ++ + + +Y +
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
IDGL K G KA F+++ P TYT MI+ Y + A + +M + C
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ TY +V F R E + E++ G + LM+
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A ++FR+M + PS ++ + ++ + V +F+ + + ++
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112
Query: 230 MIN---LYGKASKSFMALKLFNEMRSHKCKP-NICTYTALVNAFAREGLCEEAEEIFEQL 285
++N L + F L + K P N T+T L+ E ++A +F++L
Sbjct: 113 VVNSCCLMHRTDLGFSVLAI----HFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168
Query: 286 QGAGI-EPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
I EP+ Y +M +A+ L+ M G +P+ +Y I++DA+ + G+
Sbjct: 169 VRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGM 228
Query: 334 HEGKCSYSLVELSVKHYP 351
+G S L E+ K P
Sbjct: 229 LDGATSL-LNEMKQKSIP 245
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++K + G E+A +F EM + G+ PS V YNS + L + G A+ +
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCL 243
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P+ TY L++ + K A KL +M H CK Y L+ +
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGK 303
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G +E E + +++ ++PDV YN L+ +AY+++ +M + GC+P+ A+
Sbjct: 304 TGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAAT 363
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
Y +M+D Y AG +G L HYP
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHYP 394
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 141 TYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
T L L +R I +T + L++ Y + L+EK +F +M + + +N ++ L
Sbjct: 102 TILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTL 161
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ KA EIFQ+ +P++ +Y +MI + K A LF+EM +P++
Sbjct: 162 VDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSV 221
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-------- 311
TY + + R+G + A +F+ + G P+ Y LME + I +
Sbjct: 222 VTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFD 281
Query: 312 ---MGCEPDRASYNIMVDAYGRAG 332
GC+ +Y +++ G+ G
Sbjct: 282 MEFHGCKLRPVNYGVLMTHLGKTG 305
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TYALL++ +C G ++A+ + +M +G V Y + L K GN + +
Sbjct: 254 PNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESL 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
MK+ +P TY +++N K K A K+ +M+ C PN TY +++ +
Sbjct: 314 LNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCN 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + A +I + +G P + + +L+
Sbjct: 374 AGDFDGAMKILNAMLMSGHYPHLKTFASLV 403
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+E + +K+A+ ++ C Y +L+ +G +++ E++ EM+K
Sbjct: 261 LLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P V YN ++ L K G A ++ +M+ C P+ TY +MI+ Y A A
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGA 380
Query: 244 LKLFNEMRSHKCKPNICTYTALV 266
+K+ N M P++ T+ +LV
Sbjct: 381 MKILNAMLMSGHYPHLKTFASLV 403
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 69/146 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y+ L+ S E E + +R + + ++ + I K +K +E+F +M
Sbjct: 83 SYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQM 142
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C + +++ +++N + A ++F + +PN +Y ++ + ++G
Sbjct: 143 PSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGW 202
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
E+A +F+++ G++P V YN+ +
Sbjct: 203 EQACNLFDEMLEKGVQPSVVTYNSXL 228
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 11/172 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A A+F + G Y+S I L + + I ++ + + + +I
Sbjct: 64 EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
YGKA ++LF++M S C + ++ L+N +A EIF+Q G
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183
Query: 292 PDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
P+ +YN +++ + L M G +P +YN + R G
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKG 235
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+P +A+ +F+ + +Y+ +I ++ + + +R+ + N +
Sbjct: 61 DPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFV 120
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-M 312
AL+ + + L E+ E+F Q+ + ++N L+ +A + + + M
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEM 180
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCS 339
G P+ SYNIM+ + + G E C+
Sbjct: 181 GFRPNSVSYNIMIKGWIKKGGWEQACN 207
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +++ YC +G + A + M G P + S + GLLKG N V
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYV 416
Query: 210 -EIFQRMKRDCCQPSTETYTLMI 231
+ + M++ + ET+ ++I
Sbjct: 417 CFVLEEMEKRQLRFDAETWRILI 439
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y ++ C G +KA + R M + P+ +Y+ ID K G A
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGAT 233
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ MK+ P TY+ +I+ K S+ LF EM PN+CT+ ++++
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL-----------ISRMHMGCEPDR 318
+EG E+AEEI + G++PDV YN +++ Y L S ++ EP+
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353
Query: 319 ASYNIMVDAYGR 330
SYNI+++ Y R
Sbjct: 354 ISYNILINGYAR 365
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+C+ ++I+A+ + + A E+ P TY+ L+ A C E +F
Sbjct: 213 TCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFL 272
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM + P+ +NS IDGL K G + A EI + M P TY ++I+ YG
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRG 332
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ A ++F+ M + +PNI +Y L+N +AR+ +EA ++ ++ G++P + N
Sbjct: 333 QVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392
Query: 299 ALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
L+ + R + G PD ++ ++ Y + GL E S+
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSH 445
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 14/236 (5%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+ K DP V+ ++I+ YG + +A + +++ P +Y +L+ Y
Sbjct: 310 IEKGVDPDVITYN---MIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQ 366
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
+++A V RE+ + GL PS V N + GL + G + A F M P T+
Sbjct: 367 KKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTH 426
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
++ Y K A+ F+++ + NI YTA+++ + G ++A FE+L
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPL 486
Query: 288 AGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
G+ PDV Y A++ EA ++ +M GC D +YN++V + R+
Sbjct: 487 IGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 151 IPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
IP + ++++ + C+ + +V K G+P + V++N+ + GL + AV
Sbjct: 103 IPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAV 162
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+++ R+ C+P+ Y ++N K + A L M KPN C Y+ +++A
Sbjct: 163 HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDA 222
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPD 317
F ++G+ + A + +++ I PD++ Y+ L++A +S+ +H+ P+
Sbjct: 223 FCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPN 282
Query: 318 RASYNIMVDAYGRAG 332
++N ++D + G
Sbjct: 283 VCTFNSVIDGLCKEG 297
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 46/255 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + S + +LE++ P T+ ++ C G +E AE + R M + G
Sbjct: 254 LIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG 313
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YN IDG G +A EIF M +P+ +Y ++IN Y + K A+
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAM 373
Query: 245 KL-----------------------------------FNEMRSHKCKPNICTYTALVNAF 269
++ F+EM S P++ T+ L+ +
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDR 318
+ GL EEA F +L+ + ++ Y A+++ A+ ++ + G PD
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDV 493
Query: 319 ASYNIMVDAYGRAGL 333
+Y M+ Y + GL
Sbjct: 494 ITYTAMISGYCQEGL 508
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A+ + E+L + IP T+ LL Y +GL+E+A + F ++ + + +Y +
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
IDGL K G KA F+++ P TYT MI+ Y + A + +M + C
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ TY +V F R E + E++ G + LM+
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A+G+ KA + + + C+P Y +L+ G +++A + +M + G
Sbjct: 341 LMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 400
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN ID L G +KA F MKR P TY ++N K ++ A
Sbjct: 401 IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEAC 460
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF+EM+++KC P++ T+ L++ A+ G E+A E +L G P+ Y YNAL+
Sbjct: 461 DLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGF 520
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ Y L M C PD +Y I+V + R G
Sbjct: 521 CRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRG 559
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY LL+ A C S LE+A +F+E + G+ Y+ +D K G KA+E
Sbjct: 298 VPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALE 356
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M++ C P T Y ++I+ GK K AL+L +M P+ TY +++ +
Sbjct: 357 VFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLS 416
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRA 319
G E+A F ++ PDV YN L+ + + R C+ PD
Sbjct: 417 SCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT 476
Query: 320 SYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
++ ++D +AG E S + + H P
Sbjct: 477 TFGTLIDTLAKAGRMEDALEQSARLVKMGHAP 508
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ A+ +G KA VF M+K G P VVYN I L K G +A+E+ + M
Sbjct: 337 TYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R P TY ++I++ + A F M+ K P++ TY L+N +
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 456
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
+EA ++F+++Q PD+ + L++ RM MG P+ YN +
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNAL 516
Query: 325 VDAYGRAG 332
+ + R+G
Sbjct: 517 ISGFCRSG 524
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 130 GQKSLHKKAEFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
G K L + E L E+ ++C+P T+ L+ +G +E A + K G P
Sbjct: 449 GLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAP 508
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
++ +YN+ I G + G K E+FQ M C P + TYT+++ + + + MA++L
Sbjct: 509 NSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELL 568
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
EM P + TY L+ + + G E+A +F+++ G PD+ Y+AL
Sbjct: 569 QEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKA 208
C P + + C +E+A +F +MR+ P V YN+ I G K G+ +A
Sbjct: 85 CQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRA 144
Query: 209 VEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+++F+R+K++ C+P+ ++ ++ K S++ AL +F EM K ++ L++
Sbjct: 145 LDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIH 204
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEP 316
R G+ +A + + D + Y L+ A+ +MH GC
Sbjct: 205 CTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCAL 264
Query: 317 DRASYNIMVDAYGRAG 332
+YN ++ + R G
Sbjct: 265 SAVNYNFIIQGFIRCG 280
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
+LI G++ +A LELL+ +P TY +++ G EKA + F
Sbjct: 375 VLISCLGKQGKVDEA----LELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGM 430
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ P V YN+ ++GL K +A ++F M+ + C P T+ +I+ KA +
Sbjct: 431 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 490
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL+ + PN Y AL++ F R G ++ E+F+ + PD Y
Sbjct: 491 MEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 550
Query: 300 LMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
L+ + M E P A+YN+++ + AG
Sbjct: 551 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 10/196 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P ++ L+ C A AVF+EM GL V N+ I + G +
Sbjct: 154 EGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLR 213
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + M C TY +++N + +A + R C + Y ++
Sbjct: 214 QARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFII 273
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYRLISRMHM-GCEP 316
F R G EA ++FE PDV+ YN L+ EA L G
Sbjct: 274 QGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVL 333
Query: 317 DRASYNIMVDAYGRAG 332
D +Y+ ++DA+G+AG
Sbjct: 334 DVFTYSYLMDAFGKAG 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 50/245 (20%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCM---------------------------------- 166
TY LL + T ++K C
Sbjct: 5 TYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFG 64
Query: 167 -SGLLEKAEAVFREMRKYGL-PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPS 223
+G L+ A + +MR+ P V + + + L + ++A+ +F M+ C C P
Sbjct: 65 RAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPD 124
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIF 282
Y +I Y KA AL +F ++ CKPN ++ LV + +A +F
Sbjct: 125 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184
Query: 283 EQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRA 331
+++ GAG++ DV N L+ +A RL+ M C D +Y I+V+A+ RA
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRA 244
Query: 332 G-LHE 335
G +HE
Sbjct: 245 GQMHE 249
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 91 PTHATWDDLINVSVQLRLNKK----WDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFT 141
P T++ L+N +LR + +D + C+ L LI+ + + A
Sbjct: 438 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 497
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L+ P Y L+ +C SG ++K +F++M + P ++ Y + G +
Sbjct: 498 SARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 557
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A+E+ Q M R+ P+ TY ++I A + A LF EM + P++ T
Sbjct: 558 RGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQT 617
Query: 262 YTALVN 267
Y+AL N
Sbjct: 618 YSALPN 623
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + K + ++++ C P TY +L+ + G A + +EM + G
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
P+ YN I L G + A +F+ M P +TY+ + NL
Sbjct: 576 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 624
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 63 SPTAQQILRFVQREVDSNTI-----WDAF---DSLPPTHATWDDLINVSVQLRLNKKWDP 114
S +Q + ++++++ N + DAF +DD+I S+ DP
Sbjct: 274 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI--------DP 325
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+ L+ + KA+ + ++ C P TY L+K +C S +E
Sbjct: 326 DIFTYNS---LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+FREM GL V Y + I GL G+ A ++F++M D P TY+++++
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K AL++F+ M+ + K +I YT ++ + G ++ ++F L G++P+V
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 502
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
YN ++ EAY L+ +M G P+ +YN ++ A+ R G
Sbjct: 503 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +++ C G + A + +M + V++N+ ID L K + A+
Sbjct: 183 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242
Query: 210 EIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+F+ M+ +P+ TY+ +I+ YG+ S A +L ++M K PN+ T+ AL+
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALI 299
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CE 315
+AF +EG EAE++++ + I+PD++ YN+L+ + + R+ C
Sbjct: 300 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 359
Query: 316 PDRASYNIMVDAYGRA 331
PD +YN ++ + ++
Sbjct: 360 PDVVTYNTLIKGFCKS 375
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T + LL YC + A A+ +M + G P + + + I GL +AV +
Sbjct: 115 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 174
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + CQP+ TY +++N K + +AL L N+M + K + ++ + ++++ +
Sbjct: 175 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 234
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++A +F++++ GI P+V Y++L+ +A +L+S M P+ +
Sbjct: 235 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 294
Query: 321 YNIMVDAYGRAG 332
+N ++DA+ + G
Sbjct: 295 FNALIDAFVKEG 306
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C + A A+ +M K G PS V +S ++G G AV + +M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+P T T+T +I+ L+ KAS+ A+ L + M C+PN+ TY +VN +
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASE---AVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASY 321
G + A + +++ A IE DV +N ++ +A L M G P+ +Y
Sbjct: 201 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260
Query: 322 NIMVD---AYGR 330
+ ++ +YGR
Sbjct: 261 SSLISCLCSYGR 272
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 15/193 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ ++ + C ++ A +F+EM G+ P+ V Y+S I L G A ++ M
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ T+ +I+ + K K A KL+++M P+I TY +LVN F +
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
+A+++FE + PDV YN L++ + L M H G D +Y ++
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404
Query: 326 DAYGRAGLHEGKC 338
H+G C
Sbjct: 405 QGL----FHDGDC 413
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + +++ P TY++LL C +G LEKA VF M+K + +Y + I+
Sbjct: 416 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 475
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKC 255
G+ K G ++F + +P+ TY MI+ G SK + A L +M+
Sbjct: 476 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS--GLCSKRLLQEAYALLKKMKEDGP 533
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
PN TY L+ A R+G + E+ +++
Sbjct: 534 LPNSGTYNTLIRAHLRDGDKAASAELIREMR 564
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G ++ +F + G+ P+ V YN+ I GL Q+A + ++MK
Sbjct: 470 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
D P++ TY +I + + + +L EMRS
Sbjct: 530 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 11/194 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ SR +P+ + LL A + ++ +M++ + YN I+ +
Sbjct: 38 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 97
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+ + +M + +PS T + ++N Y + A+ L ++M +P+ T+T
Sbjct: 98 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 157
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG- 313
L++ EA + +++ G +P++ Y ++ A L+++M
Sbjct: 158 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 217
Query: 314 CEPDRASYNIMVDA 327
E D +N ++D+
Sbjct: 218 IEADVVIFNTIIDS 231
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ +F M + PS + +++ K K + + L +M+ + + TY L+N
Sbjct: 31 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 90
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEP 316
F R A + ++ G EP + ++L+ Y L+ +M MG P
Sbjct: 91 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150
Query: 317 DRASYNIMV 325
D ++ ++
Sbjct: 151 DTITFTTLI 159
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P+ +Y++L+ YC S +++A+A+ +M + L P+ V YN+ + GL + +A
Sbjct: 257 CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQ 316
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F++M P+ TY+++++ K ALKL M+ K +P+I Y L+
Sbjct: 317 ELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGM 376
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
G E A+E+F +L GI P V YN ++ EAY+L +M G PD
Sbjct: 377 FIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDS 436
Query: 319 ASYNIMVDAY 328
SYN+++ +
Sbjct: 437 CSYNVIIQGF 446
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A + E+ +P T+ +L+ C G++ +A VF M + G+ P+ YN+
Sbjct: 173 KEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G A ++F+ M C PS +Y+++IN Y K+ + A L +M +
Sbjct: 233 MNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN TY L+ EA+E+F+++ +G+ P++ Y+ L+ EA +
Sbjct: 293 IPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK 352
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAG 332
L++ M EPD YNI++ AG
Sbjct: 353 LLTSMQERKLEPDIVLYNILIQGMFIAG 380
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
+M +G+ + N I+ L + + AV + +M + QP + T+T +IN
Sbjct: 111 QMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEG 170
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ A++LFNEM PN T+T LV+ ++G+ EA +FE + G+EP++Y YN
Sbjct: 171 RIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYN 230
Query: 299 ALMEAYRLISRMHM-------------GCEPDRASYNIMVDAYGRA 331
ALM Y L R+ M GC P SY+I+++ Y ++
Sbjct: 231 ALMNGYCL--RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKS 274
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 99/181 (54%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + +A+ ++ + IP TY L++ C + L +A+ +F++M
Sbjct: 266 ILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSS 325
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ Y+ +DGL K G+ ++A+++ M+ +P Y ++I A K +A
Sbjct: 326 GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVA 385
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+++ ++ +P++ TY ++ +EGL +EA ++F +++ G PD +YN +++
Sbjct: 386 KELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQG 445
Query: 304 Y 304
+
Sbjct: 446 F 446
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +L+ + C + A +V +M K G+ P +V + + I+GL G ++AVE+F M
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+T T+T+++++ K A +F M +PNI TY AL+N +
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+A ++FE + G G P V++Y+ L+ Y
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGY 271
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C G +++A +F EM P+ V + +D L K G +A +
Sbjct: 154 PDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCV 213
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M +P+ TY ++N Y + A K+F M C P++ +Y+ L+N + +
Sbjct: 214 FETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCK 273
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+EA+ + Q+ + P+ YN LM EA L +M G P+ +
Sbjct: 274 SRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRT 333
Query: 321 YNIMVDAYGRAG 332
Y+I++D + G
Sbjct: 334 YSILLDGLCKHG 345
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + ++ S +P TY++LL C G LE+A + M++ L P V+YN I
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G+ G + A E+F ++ + +PS TY +MI K S A KLF +M
Sbjct: 374 QGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFL 433
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
P+ C+Y ++ F + A ++ +++ G D + L++
Sbjct: 434 PDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY +++K GL ++A +FR+M G P + YN I G L+ +P A+++
Sbjct: 399 PSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQL 458
Query: 212 FQRMKRDCCQPSTETYTLMINL 233
M + T+ ++++L
Sbjct: 459 IDEMVGRRFSADSSTFKMLLDL 480
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C+P TY +LL+A C ++A + EMR G P + YN ++G+ + G
Sbjct: 181 DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEG 240
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+E + + C+P+T +Y +++ A + A KL EM PN+ T+
Sbjct: 241 RVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFN 300
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISR 309
L++ R GL E A E+ +Q+ G P+ +YN ++ A+ ++SR
Sbjct: 301 MLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360
Query: 310 MHMGCEPDRASYNIMVDAYGRAG 332
GC PD SYN ++ A R G
Sbjct: 361 ---GCYPDIVSYNTLLTALCRGG 380
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 143 LELLDS----RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD C P +Y +L A+C +++A A M G P V YN+ +
Sbjct: 316 MEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L +GG AVE+ ++K C P +Y +I+ KA K+ AL+L NEM + +P+
Sbjct: 376 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------EAYRLIS--- 308
I TY+ + + RE EEA F ++Q GI P+ YNA++ E + I
Sbjct: 436 IITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFI 495
Query: 309 -RMHMGCEPDRASYNIMVDAYGRAGL 333
+ GC P+ ++Y I+++ GL
Sbjct: 496 YMISNGCMPNESTYTILIEGLTYEGL 521
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++ YC++G L+ A + +M + P + YN+ I GL G A+
Sbjct: 120 CEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNAL 176
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M R C P TYT+++ K S A+KL +EMR+ C P+I TY +VN
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG ++A E + L G EP+ +YN ++ +A +L++ M G P+
Sbjct: 237 CQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNV 296
Query: 319 ASYNIMVDAYGRAGLHE 335
++N+++ R GL E
Sbjct: 297 VTFNMLISFLCRRGLVE 313
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++LK C + E AE + EM + G PP+ V +N I L + G + A+
Sbjct: 257 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAM 316
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ ++ + C P++ +Y +++ + K K A+ M S C P+I +Y L+ A
Sbjct: 317 EVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTAL 376
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
R G + A E+ QL+ G P + +YN ++ EA L++ M G +PD
Sbjct: 377 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDI 436
Query: 319 ASYNIMVDAYGR 330
+Y+ + R
Sbjct: 437 ITYSTISSGLCR 448
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+ C GL+E A V ++ KYG P+++ YN + K +A+
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C P +Y ++ + + A++L ++++ C P + +Y +++ +
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G +EA E+ ++ G++PD+ Y+ + EA R ++ MG P+
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473
Query: 321 YNIMV 325
YN ++
Sbjct: 474 YNAIL 478
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 131 QKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
QK + + F +EL+ SR C P +Y LL A C G ++ A + +++ G P
Sbjct: 344 QKKMDRAMAF--VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 401
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY---------------------- 227
+ YN+ IDGL K G ++A+E+ M QP TY
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461
Query: 228 ---------TLMIN--LYG--KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
T++ N L G K ++ A+ LF M S+ C PN TYT L+ EGL
Sbjct: 462 VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGL 521
Query: 275 CEEAEEIFEQLQGAGI 290
+EA E+ +L G+
Sbjct: 522 VKEARELLGELCSRGV 537
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY + ++ C +G L +A + MR Y +P V YN+ I GL K PQ+A+ +RM
Sbjct: 224 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRM 282
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C P TY +I+ Y K S A +L + P+ TY +L+N EG
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIM 324
E A E+F + Q GI+PD+ YN+L + A ++++ M GC PD +YNI+
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402
Query: 325 VDAYGRAG 332
++ + G
Sbjct: 403 INGLCKMG 410
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +KS+ ++A +++ C+P + TY ++ YC ++++A + ++ G
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S I+GL G+ ++A+E+F + +P Y ++ AL
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ NEM C P+I TY ++N + G +A + G PDV+ +N L++ Y
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ RM G PD +YN +++ +AG
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 480
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + S+ ++A + + +P + TY L+ C G +E+A +F E + G
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 356
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VVYNS + GL G A+++ M + C P +TY ++IN K A
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 416
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ N+ P++ T+ L++ + + + A ++ E++ GI PD YN+++
Sbjct: 417 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 476
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELS 346
E M + GC P+ +YNI+++ + R+ E + S +V++S
Sbjct: 477 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME-EASKVIVKMS 528
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T+ L+ YC L+ A + M +YG+ P + YNS ++GL K G + E
Sbjct: 428 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 487
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
FQ M C P+ TY ++I + +++K A K+ +M P+ ++ L+ F
Sbjct: 488 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE--PDRASYNIMVDAY 328
R G E A +F++L+ G +N L+ A+ MHM + + S D+Y
Sbjct: 548 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 607
Query: 329 GRAGLHEGKCSYSLVELSVKH 349
L +G C + V+ + H
Sbjct: 608 TYRVLIDGSCKTANVDRAYMH 628
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 12/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C P TY +++ C G + A V + G P +N+ IDG K
Sbjct: 386 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 445
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+++ +RM P T TY ++N KA K + F EM C PN TY
Sbjct: 446 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYN 505
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ F R EEA ++ ++ G+ PD ++N L+ AY L ++
Sbjct: 506 ILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565
Query: 313 GCEPDRASYNIMVDAY-GRAGLH 334
G ++N ++ A+ G+ +H
Sbjct: 566 GYSATADTFNTLIGAFSGKLNMH 588
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L++ C + ++A R M G P YN+ IDG K Q+A E
Sbjct: 253 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 312
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + P TY +IN AL+LFNE ++ KP+I Y +LV
Sbjct: 313 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 372
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRA 319
+GL A ++ ++ G PD+ YN ++ +A +++ M G PD
Sbjct: 373 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 432
Query: 320 SYNIMVDAY 328
++N ++D Y
Sbjct: 433 TFNTLIDGY 441
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 83/170 (48%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
T+ E++ C P TY +L++ +C S +E+A V +M + GL P AV +N+ I G
Sbjct: 488 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ + A +FQ+++ + +T+ +I + MA K+F+EM S + +
Sbjct: 548 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 607
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
TY L++ + + A ++ G P + + ++ + + R+
Sbjct: 608 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 657
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 41/210 (19%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++AY +G L A F M + PP+A YN+ +D L+ +A +++ RM
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALK------------------------------- 245
P T+T+ + + ++ +AL+
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA------ 299
LF++M PN+ + +++A + G EA + ++ G+ +++ YN
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233
Query: 300 ----LMEAYRLISRMHMGCEPDRASYNIMV 325
L EA RL+ M PD +YN ++
Sbjct: 234 EAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 263
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 107 RLNKKWDPIVLMSC-----VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
+N+ + ++L C +LIE + + + ++A +++ P ++ L+
Sbjct: 484 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 543
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C +G LE A +F+++ + G +A +N+ I N A +IF M +
Sbjct: 544 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 603
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
+ TY ++I+ K + A EM P++ T+ ++N+ +A I
Sbjct: 604 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGI 663
Query: 282 FEQLQGAGIEPDV 294
+ G+ P+V
Sbjct: 664 IHIMVKIGVVPEV 676
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 185 LPPSAV--VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P+ + +Y + I + G + AV+ F+RM C P+ Y +++ A+
Sbjct: 45 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG------IEPDVYA 296
A K++ M + P++ T+T + +F A + L G + +YA
Sbjct: 105 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYA 164
Query: 297 YNALMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ +A +L +M H P+ A++N ++ A + G
Sbjct: 165 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 201
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 128 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 247
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307
Query: 326 DAYGRAG 332
D + G
Sbjct: 308 DGCCKDG 314
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 141 IRIAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 196
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 197 TYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQM 256
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDL 316
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ REG +AE++ ++ G++PD Y +
Sbjct: 317 DTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMI 376
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 377 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P++V + + IDG K G
Sbjct: 186 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGR 245
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT 305
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ ++G + A E +++ D Y AL+ +A +++ M +G
Sbjct: 306 LIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVG 365
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 366 LKPDARTYTMIINEFCKKG 384
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY + ++ C +G L +A + MR Y +P V YN+ I GL K PQ+A+ +RM
Sbjct: 223 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRM 281
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C P TY +I+ Y K S A +L + P+ TY +L+N EG
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIM 324
E A E+F + Q GI+PD+ YN+L + A ++++ M GC PD +YNI+
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401
Query: 325 VDAYGRAG 332
++ + G
Sbjct: 402 INGLCKMG 409
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +KS+ ++A +++ C+P + TY ++ YC ++++A + ++ G
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S I+GL G+ ++A+E+F + +P Y ++ AL
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ NEM C P+I TY ++N + G +A + G PDV+ +N L++ Y
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ RM G PD +YN +++ +AG
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 479
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + S+ ++A + + +P + TY L+ C G +E+A +F E + G
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VVYNS + GL G A+++ M + C P +TY ++IN K A
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 415
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ N+ P++ T+ L++ + + + A ++ E++ GI PD YN+++
Sbjct: 416 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 475
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELS 346
E M + GC P+ +YNI+++ + R+ E + S +V++S
Sbjct: 476 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME-EASKVIVKMS 527
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T+ L+ YC L+ A + M +YG+ P + YNS ++GL K G + E
Sbjct: 427 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 486
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
FQ M C P+ TY ++I + +++K A K+ +M P+ ++ L+ F
Sbjct: 487 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE--PDRASYNIMVDAY 328
R G E A +F++L+ G +N L+ A+ MHM + + S D+Y
Sbjct: 547 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 606
Query: 329 GRAGLHEGKCSYSLVELSVKH 349
L +G C + V+ + H
Sbjct: 607 TYRVLIDGSCKTANVDRAYMH 627
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 12/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C P TY +++ C G + A V + G P +N+ IDG K
Sbjct: 385 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 444
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+++ +RM P T TY ++N KA K + F EM C PN TY
Sbjct: 445 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYN 504
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ F R EEA ++ ++ G+ PD ++N L+ AY L ++
Sbjct: 505 ILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564
Query: 313 GCEPDRASYNIMVDAY-GRAGLH 334
G ++N ++ A+ G+ +H
Sbjct: 565 GYSATADTFNTLIGAFSGKLNMH 587
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L++ C + ++A R M G P YN+ IDG K Q+A E
Sbjct: 252 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 311
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + P TY +IN AL+LFNE ++ KP+I Y +LV
Sbjct: 312 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 371
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRA 319
+GL A ++ ++ G PD+ YN ++ +A +++ M G PD
Sbjct: 372 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 431
Query: 320 SYNIMVDAY 328
++N ++D Y
Sbjct: 432 TFNTLIDGY 440
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 83/170 (48%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
T+ E++ C P TY +L++ +C S +E+A V +M + GL P AV +N+ I G
Sbjct: 487 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ + A +FQ+++ + +T+ +I + MA K+F+EM S + +
Sbjct: 547 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 606
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
TY L++ + + A ++ G P + + ++ + + R+
Sbjct: 607 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 656
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 41/210 (19%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++AY +G L A F M + PP+A YN+ +D L+ +A +++ RM
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALK------------------------------- 245
P T+T+ + + ++ +AL+
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA------ 299
LF++M PN+ + +++A + G EA + ++ G+ +++ YN
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232
Query: 300 ----LMEAYRLISRMHMGCEPDRASYNIMV 325
L EA RL+ M PD +YN ++
Sbjct: 233 EAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 262
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 107 RLNKKWDPIVLMSC-----VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
+N+ + ++L C +LIE + + + ++A +++ P ++ L+
Sbjct: 483 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 542
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C +G LE A +F+++ + G +A +N+ I N A +IF M +
Sbjct: 543 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 602
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
+ TY ++I+ K + A EM P++ T+ ++N+ +A I
Sbjct: 603 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGI 662
Query: 282 FEQLQGAGIEPDV 294
+ G+ P+V
Sbjct: 663 IHIMVKIGVVPEV 675
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 185 LPPSAV--VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P+ + +Y + I + G + AV+ F+RM C P+ Y +++ A+
Sbjct: 44 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 103
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG------IEPDVYA 296
A K++ M + P++ T+T + +F A + L G + +YA
Sbjct: 104 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYA 163
Query: 297 YNALMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ +A +L +M H P+ A++N ++ A + G
Sbjct: 164 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 200
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ C PT TY ++ AY + L +A VF EM G P V Y + ID K G
Sbjct: 388 EMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSG 447
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A++++ RM+ P T TY+ M+N GK + A KLF EM + C PN+ TY
Sbjct: 448 YLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYN 507
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
++ A+ + +++ +Q AG PD Y+ +M EA + M
Sbjct: 508 IIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRD 567
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+AG
Sbjct: 568 WAPDEPVYGLLVDLWGKAG 586
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ F +KR QP TYT MI + G+A + KL +EM S CKP + TY
Sbjct: 346 ALGFFHWLKR---QPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYN 402
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
+++A+ R EA ++FE+++GAG +PD Y L++ A L RM +
Sbjct: 403 RIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEV 462
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y+ MV+ G+ G
Sbjct: 463 GLSPDTFTYSAMVNCLGKGG 482
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 49/258 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AYG+ + ++A + E+ + P TY L+ + SG LE A ++ M++ G
Sbjct: 404 IIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y++ ++ L KGG A ++F M + C P+ TY ++I L KA +
Sbjct: 464 LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVV 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ------------------ 286
KL+ +M+ +P+ TY+ ++ G +EAE +F +++
Sbjct: 524 KLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWAPDEPVYGLLVDLWG 583
Query: 287 ----------------GAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRA 319
G++P+V N+L+ A+ ++R G P
Sbjct: 584 KAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQ 643
Query: 320 SYNIMV----DAYGRAGL 333
+Y +++ DA+ + GL
Sbjct: 644 TYTLLLSCCTDAHAQMGL 661
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ M C+P+ TY +I+ YG+A+ A+K+F EM +P+ TY L++
Sbjct: 384 KLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIH 443
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
A+ G E A +++ ++Q G+ PD + Y+A++ AY+L M GC P+
Sbjct: 444 AKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNL 503
Query: 319 ASYNIMVDAYGRA 331
+YNI++ +A
Sbjct: 504 VTYNIIIALQAKA 516
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY+++++ G L++AEAVF EMR+ P VY +D K GN KA+
Sbjct: 536 PDKITYSIVMEVLGHCGHLDEAEAVFLEMRR-DWAPDEPVYGLLVDLWGKAGNVDKALGW 594
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV----N 267
+ M +D QP+ T +++ + K ++ A + M + P++ TYT L+ +
Sbjct: 595 YHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLSCCTD 654
Query: 268 AFAREGLC 275
A A+ GLC
Sbjct: 655 AHAQMGLC 662
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G +AE +LE+ P E Y LL+ + +G ++KA + M +
Sbjct: 543 IVMEVLGHCGHLDEAEAVFLEMRRD-WAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQD 601
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
GL P+ NS + LK Q A + Q M PS +TYTL+++
Sbjct: 602 GLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLS 650
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ ++ YC S L +A +F M+ G+PP + VY + IDG K GN +KA+ +F M
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ ST + +I+ + K K A +L +M + PN TYT L+ G
Sbjct: 784 VEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
+EAE++F ++Q + P+V Y +L+ Y I R + G +PD ++++M
Sbjct: 843 KEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVM 902
Query: 325 VDAYGRAG 332
VDA+ + G
Sbjct: 903 VDAHLKEG 910
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + ++ + ++ + CIP TY++++ C +G +++A + R M G
Sbjct: 238 LINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKG 297
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P +Y + IDG + + + M +P YT +IN + K S A
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAF 357
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM + K K N TY AL++ + G E+AE++F ++ GI+PD+ YN L+E Y
Sbjct: 358 QVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGY 417
Query: 305 RLISRMHMGCE--PDRASYNIMVDAYGRAGLHEGKC 338
+ M E + N+ +AY + G C
Sbjct: 418 YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLC 453
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + + AE +++E+LDS P + L+ YC G KA A FR M G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P ++ I GL K G Q+A+ +F + P TYT +I+ K A
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----- 299
+L ++M PNI TY AL+N + G +A E+F+ + G+ + Y+
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Query: 300 -----LMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCS--YSLVELSVKHYP 351
L EA++L M + G PD Y ++D +AG E S +VE + P
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP 792
Query: 352 A 352
A
Sbjct: 793 A 793
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E++ P TY + YC +G ++ AE F EM G+ P+ V+ IDG K
Sbjct: 536 VEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKD 595
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
GN KA F+ M P +T++++I+ K K A+ +F+E+ P++ TY
Sbjct: 596 GNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTY 655
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
T+L++ +EG + A E+ + + GI P++ YNAL+
Sbjct: 656 TSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALING 696
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++A + ELLD +P TY L+ C G L+ A + +M K
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ V YN+ I+GL K G KA E+F + ++ TY+ +I Y K++ A
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA---- 299
+LF+ M+ P+ Y AL++ + G E+A +F + GI A+NA
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDG 800
Query: 300 ------LMEAYRLISRM---HMGCEPDRASYNIMVDAYGRAG 332
L+EAY+L+ M H+ P+ +Y I+++ + G
Sbjct: 801 FFKLGKLIEAYQLVEDMVDNHI--TPNHVTYTILIEYHCTVG 840
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE Y + +KA +E+ ++ C G L +A +F+EM +G
Sbjct: 413 LIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWG 472
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V+Y + + GL+K G ++A++I MK P Y +I + KA K
Sbjct: 473 LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGK 532
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EM + KPN+ TY A ++ + R G + AE F ++ +GI P+ L++ Y
Sbjct: 533 SYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGY 592
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + G PD ++++++ + G
Sbjct: 593 CKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNG 631
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLINVSV---------QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
L P H + LIN V Q++ I L + LI + +KAE
Sbjct: 333 LKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAE 392
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ E+ P TY L++ Y +EKA + E++K L +A + + ++GL
Sbjct: 393 DLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGL 452
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G+ +A E+FQ M +P+ YT ++ K + A+K+ M+ P++
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLIS 308
Y ++ F + G EE + ++ G++P+VY Y A + Y I
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572
Query: 309 RMHMGCEPDRASYNIMVDAYGRAG 332
+ G P+ ++D Y + G
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDG 596
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ +C +G +E+ ++ EM GL P+ Y ++I G + G Q A
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ T +I+ Y K + A F M P++ T++ L++ ++
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G +EA +F +L G+ PDV+ Y +L+ A+ L M G P+ +
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689
Query: 321 YNIMVDAYGRAG 332
YN +++ + G
Sbjct: 690 YNALINGLCKLG 701
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++D+ P TY +L++ +C G +++AE +F EM+K + P+ + Y S + G + G
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT-- 261
+ +F M +P +++M++ + K ALKL ++M S N+C
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV--NVCKNL 933
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAG 289
YT L++A + E ++ ++++ G
Sbjct: 934 YTILIDALCKHNNLSEVLKVLDEVEKQG 961
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIE + K+AE ++E+ +P TY LL Y G + ++F EM
Sbjct: 831 ILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR 890
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + ++ +D LK GN KA+++ M + YT++I+ K +
Sbjct: 891 GIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEV 950
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
LK+ +E+ K ++ T LV F R G +EA + E +
Sbjct: 951 LKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
I + + L+ + G L +A + +M + P+ V Y I+ GN ++A +
Sbjct: 788 IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M++ P+ TYT +++ Y + + LF+EM + KP+ ++ +V+A
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907
Query: 271 REGLCEEAEEIFEQL--QGAGIEPDVYA--------YNALMEAYRLISRMH-MGCEPDRA 319
+EG +A ++ + + +G + ++Y +N L E +++ + G + A
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLA 967
Query: 320 SYNIMVDAYGRAG 332
+ +V + RAG
Sbjct: 968 TCGTLVCCFHRAG 980
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 142 YLELLDSRCIPTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ ++SR + +++ T+++L C SGL A V M P + +D +
Sbjct: 93 FFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKI-----LDSI 147
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+K ++ + S + ++I++Y K A+ +F ++++ +
Sbjct: 148 IK---------CYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGL 198
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----HM--- 312
+L + E ++++ + GA I PDVY Y L+ AY + ++ H+
Sbjct: 199 ACCNSLSKDLLKGNRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFD 257
Query: 313 ----GCEPDRASYNIMVDAYGRAG 332
GC P+ +Y++++ RAG
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAG 281
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 44/291 (15%)
Query: 79 SNTIWDAFDSLP-----PTHATWDDLINVSVQL------------RLNKK---WDPIVLM 118
S W ++S+ P H T ++ V +L ++N+K W VL
Sbjct: 265 SEDAWKVYESMETENIHPDHMTCSIMVTVMRELGHSAKDAWQFFEKMNRKGVRWSEEVLG 324
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ ++ +E +++L ++E + S + Y L+ A+C S +E AE +F
Sbjct: 325 ALINSFCVEGLRRQALIIQSEMEKKGVSSSAIV-----YNTLMDAFCKSNHIEAAEGLFV 379
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM+ G+ P A YN + + P+ ++ + M+ +P+ +YT +I YGK
Sbjct: 380 EMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQK 439
Query: 239 K--SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A F +M+ KP +YTAL++A++ GL E+A FE +Q GI+P +
Sbjct: 440 NMSDMAAADAFLKMKKVGVKPTSQSYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIET 499
Query: 297 YNALMEAYR--------------LISRMHMGCEPDRASYNIMVDAYGRAGL 333
Y L+ A+R +IS E A++NI+VD + + GL
Sbjct: 500 YTTLLNAFRHAGDAQTLMEIWKLMISE---KVEGTGATFNILVDGFAKQGL 547
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Query: 125 LIEAYG-QKSLHKKAEF-TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI AYG QK++ A +L++ PT +Y L+ AY +SGL EKA A F M+
Sbjct: 431 LIIAYGKQKNMSDMAAADAFLKMKKVGVKPTSQSYTALIHAYSVSGLHEKAYAAFENMQN 490
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ PS Y + ++ G+ Q +EI++ M + + + T+ ++++ + K
Sbjct: 491 EGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMISEKVEGTGATFNILVDGFAKQGLFME 550
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A ++ +E KP + TY L+NA+AR G + ++ +++ ++PD Y+ ++
Sbjct: 551 AREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKEMAVLKLKPDSVTYSTMIF 610
Query: 303 AY 304
A+
Sbjct: 611 AF 612
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 48/196 (24%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E+ L+ ++C+ GL +A + EM K G+ SA+VYN+ +D K + + A
Sbjct: 319 SEEVLGALINSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAE--- 375
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
LF EM++ KP TY L++A++R
Sbjct: 376 --------------------------------GLFVEMKAKGIKPIAATYNILMHAYSRR 403
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCEPDRA 319
+ E++ E++Q G++P+ +Y L+ AY + +G +P
Sbjct: 404 MQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPTSQ 463
Query: 320 SYNIMVDAYGRAGLHE 335
SY ++ AY +GLHE
Sbjct: 464 SYTALIHAYSVSGLHE 479
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY LH+KA + + + P+ +TY LL A+ +G + +++ M
Sbjct: 468 LIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMISEK 527
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + +N +DG K G +A E+ + +P+ TY ++IN Y + +
Sbjct: 528 VEGTGATFNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLP 587
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAR 271
+L EM K KP+ TY+ ++ AF R
Sbjct: 588 QLLKEMAVLKLKPDSVTYSTMIFAFVR 614
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLF 247
VYN+ I GLL G + A ++++ M+ + P T ++M+ + G ++K A + F
Sbjct: 251 VYNATISGLLSSGRSEDAWKVYESMETENIHPDHMTCSIMVTVMRELGHSAKD--AWQFF 308
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
+M + + AL+N+F EGL +A I +++ G+ YN LM+A+
Sbjct: 309 EKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCKS 368
Query: 305 --------RLISRMHMGCEPDRASYNIMVDAYGR 330
+ G +P A+YNI++ AY R
Sbjct: 369 NHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSR 402
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++L +C+ KA V +EM + G+ P+ YN+ + G + G + A E F M
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+ TYT +++ +G A + A +F+EM P++ TY A++ ++
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
E A +FE++ G EP+V YN L+ L+ RM + GCEP+ +YN+M
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 325 VDAY 328
+ Y
Sbjct: 377 IRYY 380
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 63 SPTAQQILR-FVQREVDSN-----TIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIV 116
+P A ++L+ V+R ++ N T+ F W+ L + K+ I
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF------LEMKKRDCEID 264
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+++ ++ + +G K+A + E++ +P+ TY +++ C +E A +
Sbjct: 265 VVTYTTV--VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F EM + G P+ YN I GL G + E+ QRM+ + C+P+ +TY +MI Y +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNA-FARE 272
S+ AL LF +M S C PN+ TY L++ F R+
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 94 ATWDDLINVSVQLRLNKK-WDPIVLMSCVSI--------LLIEAYGQKSLHKKAEFTYLE 144
+++D I+++ +L L+ W I M + I ++ E Y KA +L
Sbjct: 92 SSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLN 151
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ + C ++ +L C S +EKA +FR +R V YN ++G
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
KA+E+ + M P+ TY M+ + +A + A + F EM+ C+ ++ TYT
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
+V+ F G + A +F+++ G+ P V YNA+++ A + M G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 314 CEPDRASYNIMVDAYGRAG 332
EP+ +YN+++ AG
Sbjct: 331 YEPNVTTYNVLIRGLFHAG 349
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY +LK + +G + A F EM+K V Y + + G G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F M R+ PS TY MI + K A+ +F EM +PN+ TY
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMG 313
L+ G EE+ ++++ G EP+ YN ++ Y L +M G
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 314 -CEPDRASYNIMVDA 327
C P+ +YNI++
Sbjct: 400 DCLPNLDTYNILISG 414
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+LE+ C TY ++ + ++G +++A VF EM + G+ PS YN+ I L K
Sbjct: 253 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 312
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
N + AV +F+ M R +P+ TY ++I A + +L M + C+PN T
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y ++ ++ E+A +FE++ P++ YN L+
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y ++ C G + + + EMR GL P V YN+ ++G K GN + + + M
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TYT +IN KA A+++F++MR +PN TYT L++ F ++GL
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
EA ++ ++ +G P V YNAL+ Y + R+ G PD SY+ +
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 325 VDAYGR 330
+ + R
Sbjct: 459 IAGFCR 464
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ A C +++A A+ R M G+ + + YNS I+GL G + E+
Sbjct: 240 PNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGEL 299
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ P TY ++N + K L L +EM PN+ TYT L+N +
Sbjct: 300 VEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCK 359
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G A EIF+Q++ G+ P+ Y L+ EAY+++S M + G P +
Sbjct: 360 AGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVT 419
Query: 321 YNIMVDAY 328
YN +V Y
Sbjct: 420 YNALVHGY 427
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P E TY L+ +C G L + + EM GL P+ V Y + I+ + K GN +AVE
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF +M+ +P+ TYT +I+ + + A K+ +EM P++ TY ALV+ +
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
G +EA I + G+ PDV +Y+ ++ +A+++ M G PD
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488
Query: 320 SYNIMVDA 327
+Y+ ++
Sbjct: 489 TYSSLIQG 496
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + QK L +A E++ S P+ TY L+ YC G +++A + R M + G
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERG 447
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
LPP V Y++ I G + KA ++ + M P T TY+ +I K A
Sbjct: 448 LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAF 507
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
LF EM P+ TYT+L+NA+ +G +A + +++ G PD Y+ L+
Sbjct: 508 DLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGL 567
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVD 326
A RL+ ++ + PD +YN +++
Sbjct: 568 NKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ +C GL+ +A V EM G PS V YN+ + G G Q+AV I
Sbjct: 380 PNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGI 439
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P +Y+ +I + + + A ++ EM P+ TY++L+
Sbjct: 440 LRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCL 499
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+ EA ++F ++ G+ PD Y +L+ AY RL M G PD +
Sbjct: 500 QQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVT 559
Query: 321 YNIMVDAYGR 330
Y+++++ +
Sbjct: 560 YSVLINGLNK 569
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ AE VFR+M + G+ P+ YN I G++ G+ +K + ++M+++ P+ TY +
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ K K A+ L M N+ +Y +++N +G E E+ E+++G G+
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308
Query: 291 EPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
PD YN L+ + +H G P+ +Y +++ +AG
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAG 361
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ +P TY+ L++ C+ L +A +FREM + GLPP V Y S I+ G
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA+ + M + P TY+++IN K +++ +A +L ++ + P+ TY
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYN 596
Query: 264 ---------------ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
LV F +GL EA+ +F+ + +P+ YN ++ +
Sbjct: 597 TLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGG 656
Query: 309 RMH 311
+H
Sbjct: 657 NVH 659
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 82 IWDAFD--------SLPPTHATWDDLIN-------VSVQLRLNKKWDPIVLM--SCVSIL 124
+ +AFD LPP T+ LIN +S LRL+ + + + +
Sbjct: 503 LVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSV 562
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL---------------KAYCMSGL 169
LI +K+ K A+ L+L +P + TY L+ K +CM GL
Sbjct: 563 LINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGL 622
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD--CCQPSTETY 227
+ +A+ VF+ M + P+A +YN I G +GGN KA ++ ++ C +
Sbjct: 623 MNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACH-TVAVI 681
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT-ALVNAFAREGLCEEAEEIFEQLQ 286
L+ L + ++ L N +RS C+ N LV +EG + + ++
Sbjct: 682 ALVKALAREGMNDELSRLLQNILRS--CRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMA 739
Query: 287 GAGIEPD 293
G+ PD
Sbjct: 740 KDGLLPD 746
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LL+ A + + A L+ + S + P E T A L+ AY + + ++A +FR M
Sbjct: 142 LLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPN 201
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+P +A+ YN+ + +L G A I+ M D P TY +I +G K
Sbjct: 202 IGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 261
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+++F +M+ H P++ TY L+NA+ R G E A ++F+++ G G E + +YN +++
Sbjct: 262 AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIK 321
Query: 303 AY 304
Y
Sbjct: 322 GY 323
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AYG+ ++ ++A ++ + +P T +Y +LKA G A ++ M
Sbjct: 179 LISAYGRAAIPQEA-VKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIAD 237
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I G + AV +F MK P TY ++N + +A A
Sbjct: 238 GVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESA 297
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+F+EM + N +Y ++ + EEA +F ++ G+ + ALM
Sbjct: 298 RKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 355
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G KAE FR++ K G+ A +NS I G K G P+ A EI M
Sbjct: 466 YNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEILAIMT 524
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R E++ L+++ + K ++ A + M P+ + +++ A +G +
Sbjct: 525 RREVPTDPESHALLVDSFLKKNEPADAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQ 584
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
A + + + G+ ++ + ++EA L +R H+ E N+MV+
Sbjct: 585 TASRVMKSMIEKGVTENMDVAHKILEA--LFTRGHV--EEAIGRVNLMVE 630
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M P T +I+ YG+A+ A+KLF M + +Y A++ A
Sbjct: 160 VLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAIL 219
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
G A I+ + G+ PDV YN L+ + L +M G PD
Sbjct: 220 CRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVT 279
Query: 320 SYNIMVDAYGRAG 332
+YN +++A+ RAG
Sbjct: 280 TYNTLLNAWVRAG 292
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ +G+ ++ +A E+ D+ C P TY L Y +G L++ AV M G
Sbjct: 328 MLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKG 387
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A+ Y + ID K G A+ +F +MK C P+ TY ++ + GK S++ +
Sbjct: 388 VMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVI 447
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ EM+ + C PN T+ ++ + EG ++ +++ G EPD +N L+ +Y
Sbjct: 448 KVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSY 507
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ M G P +YN +++A G
Sbjct: 508 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRG 546
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 139/333 (41%), Gaps = 45/333 (13%)
Query: 18 GFFIDKNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFVDGIFPVLSPTAQQILRFVQREV 77
GF DK+ +FN S RCGS YG G P ++ T +L +
Sbjct: 492 GFEPDKD----TFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVT-TYNALLNALAHRG 546
Query: 78 DSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
D W A +S+ +Q K + P LL+ Y + +
Sbjct: 547 D----WKAAESV--------------IQDMQTKGFKP---NETSYSLLLHCYSKAGNVRG 585
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGL----LEKAEAVFREMRKYGLPPSAVVYN 193
E E+ D + P+ +LL+ +S L E F +++KYG P VV N
Sbjct: 586 IEKVEKEIYDGQVFPS----WILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVIN 641
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S + + KA E+ + QP+ TY +++LY + + + A ++ +++
Sbjct: 642 SMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNS 701
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
+P++ +Y ++ F R+GL +EA + ++ GI+P + YN + EA
Sbjct: 702 VPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEA 761
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+I M C P +Y I+VD Y +AG HE
Sbjct: 762 NEVIRFMIEHNCRPSELTYKILVDGYCKAGKHE 794
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 143 LELLD---SRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
LELLD S+ + ++ T + ++ A G+L++A E++ G P V+YNS +
Sbjct: 272 LELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQV 331
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K G +A+ I + M+ + C P + TY + Y +A + + + M S PN
Sbjct: 332 FGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPN 391
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
TYT +++A+ + G ++A +F +++ G P+VY YN+++ + +++
Sbjct: 392 AITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLC 451
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAGLH 334
M + GC P+RA++N M+ G H
Sbjct: 452 EMKLNGCAPNRATWNTMLAVCSEEGKH 478
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 59/260 (22%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTED------TYALLLKAYCMSGLLEKAEAVF 177
L++ G++S H A +L D IP E Y +L AY SG ++A +F
Sbjct: 186 LMVRILGRESQHSIAS----KLFD--LIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLF 239
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNP-------------------------------- 205
+M GL P+ V YN +D K G
Sbjct: 240 DKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGR 299
Query: 206 ----QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A + +K + +P T Y M+ ++GKA AL + EM + C P+ T
Sbjct: 300 EGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSIT 359
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM- 310
Y L + R G +E + + + G+ P+ Y +++AY RL S+M
Sbjct: 360 YNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMK 419
Query: 311 HMGCEPDRASYNIMVDAYGR 330
+GC P+ +YN ++ G+
Sbjct: 420 DLGCAPNVYTYNSVLAMLGK 439
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 19/280 (6%)
Query: 36 SRKRCGSLRGKGWKYGSGFVDGIFPVLSPTA--QQILRFVQREVDSNTIWDAFDSLPPTH 93
+RK L+ G+K G+ + + V + L ++ D+N PP
Sbjct: 306 ARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNC--------PPDS 357
Query: 94 ATWDDLINVSVQLR-LNKKWDPIVLMSCVSIL--------LIEAYGQKSLHKKAEFTYLE 144
T+++L V+ L++ I M+ ++ +I+AYG+ A + +
Sbjct: 358 ITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSK 417
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ D C P TY +L E V EM+ G P+ +N+ + + G
Sbjct: 418 MKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGK 477
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++ + MK +P +T+ +I+ Y + + K++ EM P + TY A
Sbjct: 478 HNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNA 537
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L+NA A G + AE + + +Q G +P+ +Y+ L+ Y
Sbjct: 538 LLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCY 577
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ Y KAE V + ++ P V YN+ I G + G Q+A+ +
Sbjct: 670 PNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRV 729
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M QP+ TY ++ Y A ++ M H C+P+ TY LV+ + +
Sbjct: 730 LSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCK 789
Query: 272 EGLCEEAEEIFEQLQGAGIEPD 293
G EEA + +++ I D
Sbjct: 790 AGKHEEAMDFVTKIKEIDISFD 811
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 192 YNSYIDGLLKGGNPQKAVEIF----------QRMKRDCCQPSTETYTLMINLYGKASKSF 241
+ S + L GN ++A+ +F Q ++ D + LM+ + G+ S+
Sbjct: 144 FPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLD-----NQVVELMVRILGRESQHS 198
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+A KLF+ + K ++ YT +++A+AR G + A ++F++++G G++P + YN ++
Sbjct: 199 IASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVML 258
Query: 302 EAY-----------RLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
+ Y L+ M G E D + + ++ A GR G+ + + L EL +
Sbjct: 259 DVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKF-LAELKLNG 317
Query: 350 Y 350
Y
Sbjct: 318 Y 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 46/247 (18%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G+KS + E+ + C P T+ +L G V REM+ G P
Sbjct: 438 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDK 497
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+N+ I + G+ + +++ M + P TY ++N A + +
Sbjct: 498 DTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQD 557
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEI---------------------------- 281
M++ KPN +Y+ L++ +++ G E++
Sbjct: 558 MQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRH 617
Query: 282 -------FEQLQGAGIEPDVYAYNALMEAY---RLISR----MHM----GCEPDRASYNI 323
F+QLQ G +PD+ N+++ + ++ S+ +H G +P+ +YN
Sbjct: 618 LRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNC 677
Query: 324 MVDAYGR 330
++D Y R
Sbjct: 678 LMDLYVR 684
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 20/256 (7%)
Query: 91 PTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAEFT 141
P T++ LI+ ++ R++ D V M I +LI Y + +A+
Sbjct: 341 PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E++ +PT TY LL G + A +F EM+ + L P + YN +DGL K
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ +A+E+F ++ QPS + + +I+ KA K +A +LFN + +PN+ T
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE------ 315
YT +++ + G E A+++F ++ G P++ +N LM + M E
Sbjct: 521 YTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMA 580
Query: 316 -----PDRASYNIMVD 326
PD ++ +I+VD
Sbjct: 581 EKDFSPDASTISIVVD 596
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T +L+ YC ++ AV EM + G P+ V + S + GL G +A +
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK------CKPNICTYTAL 265
++M R +P+ TY ++N + +A+KL EM + KPN+ Y +
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGC 314
+++ ++GL ++ +E+F +++G GI PDV AY++++ A L + M G
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV 304
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
P+ ++N+++DA +AG E
Sbjct: 305 HPNVVTFNVLIDALCKAGKME 325
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C+ G ++ A +F M G+ AV YN I+G K G +A ++
Sbjct: 341 PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M P+ TY ++ + K A LF EM+ H P CTY L++ +
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
EA E+F L+ +P + +N L++ A L +R+ H G EP+ +
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520
Query: 321 YNIMVDAYGRAG 332
Y +M+ ++G
Sbjct: 521 YTVMIHGLCKSG 532
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ + C GL++K + +F EM+ G+ P V Y+S I G+ G + A +
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + P+ T+ ++I+ KA K A L M P+ TY L++ F
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HMGCE---PDRAS 320
EG ++A ++F ++ GIE D +YN L+ Y RM M C+ P +
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415
Query: 321 YNIMVDAYGRAG 332
YN ++ R G
Sbjct: 416 YNTLLTGLFREG 427
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 146 LDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++S+ I T+ +Y +L+ YC SG + +A+ ++REM + P+ + YN+ + GL + G
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ A +F MK P + TY ++++ K + A++LF+ + +H +P+I +
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMG 313
L++ + E A E+F +L G+EP+V Y ++ + G
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 314 CEPDRASYNIMVDAY 328
C P+ ++N ++ +
Sbjct: 549 CAPNLVTFNTLMRGF 563
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I++ + L K + +LE+ P Y+ ++ C +G E A+ +F EM G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V +N ID L K G ++A + + M + P T TY +I+ + + A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF M S + + +Y L+N + + G EA++++ ++ I P V YN L+
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDA 327
+A+ L M + P+ +YNI++D
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDG 457
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 52/233 (22%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+K C+ + +A + R+M + G P+ V Y + ++GL GN AV++
Sbjct: 160 PNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKL 219
Query: 212 FQRMKRD------CCQPSTETYTLMIN------LYGKASKSFMALK-------------- 245
+ M +P+ Y +I+ L K + F+ +K
Sbjct: 220 HEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSI 279
Query: 246 ---------------LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
LFNEM PN+ T+ L++A + G EEA + + + G
Sbjct: 280 IHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE 339
Query: 291 EPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
PD + YN L++ + L R+ G E D SYN++++ Y ++G
Sbjct: 340 SPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSG 392
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F YLE D + P+ + L+ C + +E A +F + GL P+ + Y I GL
Sbjct: 471 FHYLENHDFQ--PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGL 528
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G + A ++F M+ C P+ T+ ++ + + + ++L EM P+
Sbjct: 529 CKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDA 588
Query: 260 CTYTALVNAFARE 272
T + +V+ +++
Sbjct: 589 STISIVVDLLSKD 601
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C SG LE A+ +F M + G P+ V +N+ + G + QK VE+
Sbjct: 516 PNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVEL 575
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
Q M P T +++++L K K
Sbjct: 576 LQEMAEKDFSPDASTISIVVDLLSKDEK 603
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 19/193 (9%)
Query: 160 LLKAYCMSGLLEKAEA--VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
LK+ C SG ++++EA VF + P +N+ + + K + +++RM
Sbjct: 61 FLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSL 120
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
P T ++IN Y +K L + EM PN T+T+LV E
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180
Query: 278 AEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRMHMG-------CEPDRAS 320
A + ++ G P+V Y L M A +L M G +P+
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVC 240
Query: 321 YNIMVDAYGRAGL 333
Y ++D+ + GL
Sbjct: 241 YCTIIDSLCKDGL 253
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I+A+ QK + + ++++ P + L+ C G +++A + EM +
Sbjct: 264 LIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRR 323
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFM 242
G P+ + + IDGL K G +KA +F ++ R D +P+ TYT MIN Y K K
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNR 383
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A L + M+ PN TYT L++ + G A E+ + + G P++Y YNA++
Sbjct: 384 AEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID 443
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
EAYRL++++ + G + D +Y I++ + R
Sbjct: 444 GLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCR 482
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y ++ +AE + + +P +TY L+ +C G +A + M K G
Sbjct: 371 MINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEG 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ IDGL K G+ +A + ++ Q TYT++++++ + + + +L
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
FN+M P+I +YT L++ F R+ +E+E +FE+ G+ P Y +++ Y
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDA 327
+L RM + GC PD +Y ++
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 15/237 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCM 166
+ + W P V LI+ +K +KA +L+L+ S P TY ++ YC
Sbjct: 321 VRRGWKPNVY---THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCK 377
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
L +AE + M++ GL P+ Y + IDG K GN +A E+ M ++ P+ T
Sbjct: 378 EDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +I+ K A +L N++ H + + TYT L++ R+ + F ++
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497
Query: 287 GAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAG 332
G PD+++Y L+ E+ RL + +G P + +Y M+ Y R G
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++E+ P ++ L++ A C G + +AE M + G ID
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G + V F +M P+ +T +IN K A +L EM KP
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEAY----------RL 306
N+ T+T L++ ++G E+A +F +L + G +P+V+ Y A++ Y L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
+SRM G P+ +Y ++D + + G
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVG 414
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C ++ F +M K G P Y + I + +++ +F+
Sbjct: 472 TYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEA 531
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ +TYT MI Y + + +A+KLF M +H C P+ TY AL++ +E
Sbjct: 532 VSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKL 591
Query: 276 EEAEEIFEQLQGAGIEP 292
++A +++ + G+ P
Sbjct: 592 DDARNLYDAMMDKGLSP 608
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + +++ ++ + ++L P +Y L+ +C ++++E +F E
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSL 534
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ Y S I G + GN AV++FQRM C P + TY +I+ K SK A
Sbjct: 535 GLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
L++ M P T L + ++ A + ++L+
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 5/170 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ K++E + E + IPT+ TY ++ YC G A +F+ M +G
Sbjct: 511 LISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG 570
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P ++ Y + I GL K A ++ M P T + Y K S A+
Sbjct: 571 CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAI 630
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ + + + I T LV EG + A F +L EP+V
Sbjct: 631 NVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+G L++A + EM+ GL S N +D + G + A +F M + P +
Sbjct: 167 NGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ LM+ + A K N M + T T +++AF ++G F ++
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
G+ P+V + AL+ +A+ L+ M G +P+ ++ ++D + G E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + Q A Y ELL+S IP + L+ +C + +A+ +FR+M ++
Sbjct: 253 VLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRF 312
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ VYNS +DG + G+ Q+A+ ++Q M R P T ++++ + +A
Sbjct: 313 GVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVA 372
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +R N Y AL++ + R G EEA ++ G+EP+V +Y++L++
Sbjct: 373 ARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDG 432
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+ + +M + G EP+ +Y ++ + + G
Sbjct: 433 HSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 472
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 14/185 (7%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+L+ A GLL++A VFR + P+ N+ +DGL+K + A E+F M R
Sbjct: 115 GVLVIALSQMGLLDEALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEMLR 171
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
PS TY +IN A +++++M + + PN+ TYT+++ EG +
Sbjct: 172 RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGD 231
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIMVD 326
AE +F+ ++ AG+ P+ Y YN LM A+ L ++ G P+ + ++D
Sbjct: 232 AERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLID 291
Query: 327 AYGRA 331
+ +A
Sbjct: 292 GFCKA 296
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 5/174 (2%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
Q++L E T L L P E T +++++ C G ++ A +R+ G+ +A
Sbjct: 334 AQEALSLYQEMTRLGL-----CPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNA 388
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
YN+ ID + GN ++A+ RM +P+ +Y+ +I+ + K K +A+ ++ E
Sbjct: 389 AAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTE 448
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
M + +PN+ TYTAL++ A+ G + A +++ GI P+ + L++
Sbjct: 449 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDG 502
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A + KA+ + +++ + P TY ++ C G + AE +F M++ G
Sbjct: 184 LINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAG 243
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN + G +G + A ++Q + P+ +T +I+ + KA + A
Sbjct: 244 MRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAK 303
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F +M P + Y +L++ R G +EA +++++ G+ PD + + ++
Sbjct: 304 DMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGL 363
Query: 305 ------RLISRMHMGCEPD-----RASYNIMVDAYGRAG 332
++ +R G D A+YN ++D Y R G
Sbjct: 364 CDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNG 402
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L +P+ TY L+ A G + KA+ ++ +M + P+ + Y S I L + G
Sbjct: 168 EMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEG 227
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +F MK +P+ TY ++++ + + A L+ E+ + PN +T
Sbjct: 228 CIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFT 287
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L++ F + EA+++F + G+ P V YN+LM EA L M +
Sbjct: 288 TLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRL 347
Query: 313 GCEPDRASYNIMV 325
G PD + +I+V
Sbjct: 348 GLCPDEFTCSIVV 360
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 19/189 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + + A Y E++ P TY L+ + +G ++ A +EM + G
Sbjct: 429 LIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENG 488
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQR-----------------MKRDCCQPSTETY 227
+ P+A+ + +DGL + Q AV + + P++ Y
Sbjct: 489 ISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIY 548
Query: 228 -TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
TL+ LY + + A KLF+ MR + TYT L+ G A ++ +
Sbjct: 549 MTLIYGLYLDG-QHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMM 607
Query: 287 GAGIEPDVY 295
G++P Y
Sbjct: 608 KIGVKPMRY 616
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP T+ L+K C+ + +A +F M+K G P+ V Y + I GL GN A++
Sbjct: 158 IPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALK 217
Query: 211 IFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
Q M D C+P+ +Y+++I+ K A+ LFNEM +PN+ T++
Sbjct: 218 WHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSV 277
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MG 313
L++ +EG +A+++ E + GI P+++ Y +L++ + L+ ++ G
Sbjct: 278 LIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKG 337
Query: 314 CEPDRASYNIMVDAYGRA 331
EPD SYN++++ Y +
Sbjct: 338 YEPDVISYNMLINGYCKT 355
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 135 HKKAEFT--YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP------ 186
H+ E T ++ + C P TY L+K C G + A +EM P
Sbjct: 175 HRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCR 234
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ + Y+ IDGL K GN ++A+ +F M QP+ T++++I++ K + A KL
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
M PN+ TYT+L+ F G A+E+F + G EPDV +YN L+
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354
Query: 302 -----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA +L + M H+G PD + +++ A AG
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAG 391
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L+K +C+ G L A+ +F M G P + YN I+G K ++A++
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMK 363
Query: 211 IFQRMKRDCCQPSTETYTLMIN---LYGKASKS--------------------------- 240
+F M P +T +++ L GK +
Sbjct: 364 LFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLC 423
Query: 241 -----FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
F A+KLFNE+ S+ K +I T+ L++ + G E A E+FE+L GI+PD
Sbjct: 424 KNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAM 483
Query: 296 AYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAY 328
AY++++ + L +M GC PD +Y+I++ +
Sbjct: 484 AYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGF 527
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 109/214 (50%), Gaps = 11/214 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + ++A + E+L P T +LLKA ++G ++ A+ +FR ++ Y
Sbjct: 347 MLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPY 406
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+P + ++DGL K G +A+++F ++ + ET+ +I+ KA K A
Sbjct: 407 AMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETA 466
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF ++ +P+ Y+++++ F ++G ++A +F++++ G PD+ Y+ LM
Sbjct: 467 WELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG 526
Query: 304 Y-------RLISRMHMGCE----PDRASYNIMVD 326
+ +++ +H E PD Y I+ D
Sbjct: 527 FYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVED 560
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
C P +Y++++ C G E+A +F EM G+ P+ V ++ ID L K G KA
Sbjct: 232 NCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKA 291
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ + M + P+ TYT +I + A +LF M S +P++ +Y L+N
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+ + EEA ++F ++ G+ PDV L++A L ++
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 57/261 (21%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++D P T+++L+ C G + KA+ + M + G+ P+ Y S I G G
Sbjct: 262 EMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVG 321
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A E+F M +P +Y ++IN Y K K A+KLFNEM P++ T
Sbjct: 322 DLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSG 381
Query: 264 ALVNAF--------ARE----------------------GLCE-----EAEEIFEQLQGA 288
L+ A A+E GLC+ EA ++F +L+
Sbjct: 382 VLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESY 441
Query: 289 GIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG----- 332
++ D+ + L++ A+ L +++ G +PD +Y+ M+ + + G
Sbjct: 442 NMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKA 501
Query: 333 ------LHEGKCSYSLVELSV 347
+ E CS L+ S+
Sbjct: 502 NILFQKMEENGCSPDLITYSI 522
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T+ L+ C +G LE A +F ++ + G+ P A+ Y+S I G K G KA +FQ+
Sbjct: 448 ETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQK 507
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M+ + C P TY++++ + +++K ++L + M P+ Y + + ++
Sbjct: 508 MEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKD-- 565
Query: 275 CEEAEEIFEQLQ 286
E+ +E + LQ
Sbjct: 566 -EKYKEWLDLLQ 576
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 18/158 (11%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+++++M GL P + N I+ L + + + R P T+T +I
Sbjct: 112 SLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGL 171
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ A KLF M+ C PN+ TY L+ G A + +++ +
Sbjct: 172 CVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLN---DTSP 228
Query: 295 YAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y +N C P+ SY+I++D + G
Sbjct: 229 YVFN---------------CRPNVISYSIIIDGLCKVG 251
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 41/88 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y+ ++ +C G ++KA +F++M + G P + Y+ + G + +K V++
Sbjct: 480 PDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQL 539
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
RM P Y ++ ++ K K
Sbjct: 540 LHRMIEKDVWPDDGIYAIVEDMVCKDEK 567
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 15/196 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY---GLPPSAVVYNSYIDGLLKGGNPQKA 208
P Y +L+K Y +G E A V EMR+Y + P+ V Y++ + GL + G ++A
Sbjct: 207 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 266
Query: 209 VEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
E+F+ M ++D P TY ++I+ + + + A +F MR ++C+PN Y L+N
Sbjct: 267 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 326
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
++G E A+ +FE+++ AG+EPD +Y AL+ E L+ M GC+
Sbjct: 327 GHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKA 386
Query: 317 DRASYNIMVDAYGRAG 332
D +YN++++ + G
Sbjct: 387 DVVTYNLLLEGLCKDG 402
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 17/252 (6%)
Query: 97 DDLINVSVQLR-LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC---IP 152
D L ++ LR L K+ P +CV +LI+ Y + + A E+ + C P
Sbjct: 187 DVLADLIADLRDLRNKYLP-APNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRP 245
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
TY+ LL C +G +++A +F M K + P + YN IDG + G +KA I
Sbjct: 246 NLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTI 305
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+++ C+P+ Y +IN + K A +F EMRS +P+ +YTAL+ R
Sbjct: 306 FGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCR 365
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
G +E ++ +++ G + DV YN L+E R+ M + G + + AS
Sbjct: 366 HGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVAS 425
Query: 321 YNIMVDAYGRAG 332
Y I+++ +G
Sbjct: 426 YRIVMNTLCSSG 437
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + + +KA + + + C P YA L+ +C G +E A+ VF EMR
Sbjct: 288 VIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSA 347
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P AV Y + I L + G+ + +++ M+ C+ TY L++ K +
Sbjct: 348 GVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEV 407
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ L + + N+ +Y ++N G E+A + + G G P A N L+
Sbjct: 408 MDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLL 465
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + +K + A+ + E+ + P +Y L+ C G +++ + EMR+ G
Sbjct: 324 LINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKG 383
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN ++GL K G + +++ R+ + Q + +Y +++N + A+
Sbjct: 384 CKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAV 443
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L M P+ L+ G +A L G P+ + L+EA
Sbjct: 444 GLLGLMLGRGFLPHYAASNKLLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEA 502
>gi|326487712|dbj|BAK05528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 455
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 15/196 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY---GLPPSAVVYNSYIDGLLKGGNPQKA 208
P Y +L+K Y +G E A V EMR+Y + P+ V Y++ + GL + G ++A
Sbjct: 198 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 257
Query: 209 VEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
E+F+ M ++D P TY ++I+ + + + A +F MR ++C+PN Y L+N
Sbjct: 258 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 317
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
++G E A+ +FE+++ AG+EPD +Y AL+ E L+ M GC+
Sbjct: 318 GHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKA 377
Query: 317 DRASYNIMVDAYGRAG 332
D +YN++++ + G
Sbjct: 378 DVVTYNLLLEGLCKDG 393
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 17/252 (6%)
Query: 97 DDLINVSVQLR-LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC---IP 152
D L ++ LR L K+ P +CV +LI+ Y + + A E+ + C P
Sbjct: 178 DVLADLIADLRDLRNKYLP-APNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRP 236
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
TY+ LL C +G +++A +F M K + P + YN IDG + G +KA I
Sbjct: 237 NLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTI 296
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+++ C+P+ Y +IN + K A +F EMRS +P+ +YTAL+ R
Sbjct: 297 FGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCR 356
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
G +E ++ +++ G + DV YN L+E R+ M + G + + AS
Sbjct: 357 HGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVAS 416
Query: 321 YNIMVDAYGRAG 332
Y I+++ +G
Sbjct: 417 YRIVMNTLCSSG 428
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + + +KA + + + C P YA L+ +C G +E A+ VF EMR
Sbjct: 279 VIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSA 338
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P AV Y + I L + G+ + +++ M+ C+ TY L++ K +
Sbjct: 339 GVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEV 398
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+ L + + N+ +Y ++N G E+A
Sbjct: 399 MDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKA 433
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
CIP +Y +L+ C + +++A+ +F EM GL P+ YN+ + G K + +
Sbjct: 76 CIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWK-----QKI 130
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F+ M C P TY++ ++ K AL+LF EM+++ P++ Y L++A
Sbjct: 131 QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAM 190
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
+ G E+A E+F +L G+ PDV ++ +++ EAY+ +M GC PD
Sbjct: 191 CKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDC 250
Query: 319 ASYNIMVDAY 328
SYN++V +
Sbjct: 251 CSYNVIVRGF 260
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + + P AV +N +D L K G +A I + M +P+T TY+ ++N Y ++
Sbjct: 1 MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
F A K+FN M + C P++ +Y L+N + +EA++IF+++ G+ P+ YN
Sbjct: 61 VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120
Query: 300 LMEAY-----RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
L+ + +L MH GC PD +Y+I + + G
Sbjct: 121 LLGGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQG 159
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 16/221 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ +K +A+ +++ P TY+ L+ Y + + +A VF M
Sbjct: 15 ILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITR 74
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + YN I+G K +A +IF M P+T TY ++ + K
Sbjct: 75 GCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQK----- 129
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++LF +M + C P++ TY+ ++ +++G ++A E+F ++Q + PD+ YN L++A
Sbjct: 130 IQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDA 189
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
L ++H+ G PD S+ ++ R GL
Sbjct: 190 MCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGL 230
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY++ L G L++A +FREM+ L P V+YN ID + K G + A
Sbjct: 141 CSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDAR 200
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F ++ P ++T +I+ + A K F +M C P+ C+Y +V F
Sbjct: 201 ELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGF 260
Query: 270 AREGLCEEAEEIFEQLQGAGIEPD 293
+ AE++F+++ G D
Sbjct: 261 LQNNGASRAEQLFQEMFDRGFSAD 284
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 74 QREVDSNTIWD--AFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSC------VSILL 125
QR ++ I+D +F L P AT++ L+ + ++ + + + C SI L
Sbjct: 94 QRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQKI-QLFKDMHAQGCSPDLVTYSIFL 152
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
Q L + E + E+ ++ P Y +L+ A C SG LE A +F ++ GL
Sbjct: 153 HGLSKQGYLDQALEL-FREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGL 211
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + S I GL + G +A + F++M+RD C P +Y +++ + + + + A +
Sbjct: 212 LPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQ 271
Query: 246 LFNEMRSHKCKPNICTYTALVNAFARE 272
LF EM + T T + +++
Sbjct: 272 LFQEMFDRGFSADALTRTLAADLLSKD 298
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + + Y ++L P T+ LL A G LE A AVF EM
Sbjct: 22 VIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDARAVFDEMIHL 81
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN++ID + K GN + A+++ M+ +P+ TY+ +I+ Y K K A
Sbjct: 82 GIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEA 141
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LKL +M+S + + + Y L+ + + G E + ++++ GIE D YN+L+
Sbjct: 142 LKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLING 201
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLH 334
Y R+ + G P +Y+ ++D Y +AG+H
Sbjct: 202 YGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMH 243
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL Y +G + V EM + G+ V YNS I+G K G + Q M+
Sbjct: 160 YNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMR 219
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ PS TY+ +I++Y KA A ++ + + KP++ +++ ++ A+ GL E
Sbjct: 220 KRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIE 279
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A + + GI+P+V YNA+++A+
Sbjct: 280 WALSLLNDMTEMGIKPNVVTYNAIIDAF 307
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 46/222 (20%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY + A C G +E A V +M G+ P+ V Y++ IDG K ++A+++ ++M
Sbjct: 89 TYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKM 148
Query: 216 K-------RDC----------------------------CQPSTETYTLMINLYGKASKS 240
K R C + T TY +IN YGK +
Sbjct: 149 KSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRL 208
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV------ 294
+ L +MR P++ TY+ L++ +++ G+ +A ++ + +G++PDV
Sbjct: 209 DIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSF 268
Query: 295 ---YAYNALME-AYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
A N L+E A L++ M MG +P+ +YN ++DA+G++
Sbjct: 269 IDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKS 310
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
V M+ GL P+ V YN+ ID KGG + + + F++M +D P +T+ ++
Sbjct: 2 GVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAA 61
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ A +F+EM +I TY ++A + G E A ++ ++ G++P+
Sbjct: 62 CSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPN 121
Query: 294 VYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
V Y+ L++ Y +L +M M + DR YN ++ Y +AG
Sbjct: 122 VVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAG 171
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ Y G L+ + ++MRK G+ PS + Y++ ID K G A ++
Sbjct: 194 TYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDF 253
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P ++ I+ K AL L N+M KPN+ TY A+++AF + +
Sbjct: 254 KESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVM 313
Query: 276 EE 277
E
Sbjct: 314 ME 315
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
D++++ VQ + P VL LI+ Y + +H A YL+ +S P +
Sbjct: 209 DIVSILVQDMRKRGVAPSVLTYST---LIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLF 265
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG---------NPQKA 208
+ + +GL+E A ++ +M + G+ P+ V YN+ ID K
Sbjct: 266 SSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMGI 325
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKS-FMALKLFNEMRSHKCKPNICTYTALVN 267
V ++ P + ++ + S+ F L+LF +M +PN+ T++A++N
Sbjct: 326 VGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILN 385
Query: 268 AFAREGLCEEAEEIFEQLQ 286
A +R E+A + EQL+
Sbjct: 386 ACSRCNSFEDAALLLEQLR 404
>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
Length = 671
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LL+ A + + A L+ + S + P E T A L+ AY + + ++A +FR M
Sbjct: 65 LLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPN 124
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+P +A+ YN+ + +L G A I+ M D P TY +I +G K
Sbjct: 125 IGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMET 184
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+++F +M+ H P++ TY L+NA+ R G E A ++F+++ G G E + +YN +++
Sbjct: 185 AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIK 244
Query: 303 AY 304
Y
Sbjct: 245 GY 246
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AYG+ ++ ++A ++ + +P T +Y +LKA G A ++ M
Sbjct: 102 LISAYGRAAIPQEA-VKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIAD 160
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN+ I G + AV +F MK P TY ++N + +A A
Sbjct: 161 GVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESA 220
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+F+EM + N +Y ++ + EEA +F ++ G+ + ALM
Sbjct: 221 RKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 278
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G KAE FR++ K G+ A +NS I G K G P+ A EI M
Sbjct: 389 YNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEILAIMT 447
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R E++ L+++ + K ++ A + M P+ + +++ A +G +
Sbjct: 448 RREVPTDPESHALLVDSFLKKNEPADAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQ 507
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
A + + + G+ ++ + ++EA L +R H+ E N+MV+
Sbjct: 508 TASRVMKSMIEKGVTENMDVAHKILEA--LFTRGHV--EEAIGRVNLMVE 553
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M P T +I+ YG+A+ A+KLF M + +Y A++ A
Sbjct: 83 VLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAIL 142
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
G A I+ + G+ PDV YN L+ + L +M G PD
Sbjct: 143 CRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVT 202
Query: 320 SYNIMVDAYGRAG 332
+YN +++A+ RAG
Sbjct: 203 TYNTLLNAWVRAG 215
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G ++ G+ + + M
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 326 DAYGRAG 332
D + G
Sbjct: 308 DGCCKEG 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q ++ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 141 IRVAQSVFNAITKW----GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 196
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD +P T+ L+ +C SG ++ A ++++M
Sbjct: 197 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQM 256
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 316
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ AG++PD Y +
Sbjct: 317 ETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMI 376
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 377 INEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 193 PDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEI 252
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 253 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 312
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRAS 320
EG E A E +++ I D AY AL ++A +++ M G +PD +
Sbjct: 313 EGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGT 372
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 373 YTMIINEFCKKG 384
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G ++ G+ + + M
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGXCKEG 325
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M P TY +I YG K + A L +EM KP+ TYT L++
Sbjct: 264 YKQMLSQSLSPDLITYNTLI--YGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGX 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDR 318
+EG E A E +++ I+ D Y AL ++A +++ M +G +PD
Sbjct: 322 CKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDT 381
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 382 ITYTMIINEFCKKG 395
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q ++ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRVAQSVFNAITKW----GLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL + G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 328 ETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ + A E +RM ++ Q YT +I+ + + A
Sbjct: 307 LKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAE 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+ EM S KP+ TYT ++N F ++G ++ +++Q G P V
Sbjct: 367 KVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSV 416
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G+ PS YN+ I K Q AV+IF +++ +TY+ MI+ YGKA
Sbjct: 1 MKAAGIVPSLQTYNTMISVYGKARELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGF 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF+ M+ KP TY +++A+AR GL AEE+F +Q G PD Y Y +
Sbjct: 61 FQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQDEGYSPDSYTYLS 120
Query: 300 LM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
L+ EA L+ RMH G P +N +V A+G+AGL E
Sbjct: 121 LICAYTNCQRFQEAEDLLKRMHRQGLAPGLVHFNHLVFAFGKAGLVE 167
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 10/218 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ + A + L S E TY+ ++ Y +G + A +F M++ G
Sbjct: 16 MISVYGKARELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGFFQDAAKLFSRMQQEG 75
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ +D + G +A E+F M+ + P + TY +I Y + A
Sbjct: 76 IKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQDEGYSPDSYTYLSLICAYTNCQRFQEAE 135
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M P + + LV AF + GL E+A ++ ++ AG++ D+ + +++ Y
Sbjct: 136 DLLKRMHRQGLAPGLVHFNHLVFAFGKAGLVEDATRLYMEIGKAGLKSDLACHRTMLKIY 195
Query: 305 RLISRMHMG----------CEPDRASYNIMVDAYGRAG 332
R R H G EPD Y + +D Y AG
Sbjct: 196 RDNGRTHEGILLFEKLQNYIEPDGNIYRMAIDLYESAG 233
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 34/162 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++AY + LH +AE + ++ D P TY L+ AY ++AE + + M + G
Sbjct: 86 MLDAYARSGLHTRAEEVFNDMQDEGYSPDSYTYLSLICAYTNCQRFQEAEDLLKRMHRQG 145
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--------------------------- 217
L P V +N + K G + A ++ + +
Sbjct: 146 LAPGLVHFNHLVFAFGKAGLVEDATRLYMEIGKAGLKSDLACHRTMLKIYRDNGRTHEGI 205
Query: 218 -------DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ +P Y + I+LY A K A +F M+S
Sbjct: 206 LLFEKLQNYIEPDGNIYRMAIDLYESAGKIVEARYIFQLMKS 247
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 55/267 (20%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I Y + ++A ++++++S C+P T+ L+ +C +G+LE A +F EM K
Sbjct: 248 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 307
Query: 184 GLPPSAVVYNSYIDGLLKG-GNPQKAVEIFQRMK-------------------------- 216
G + V YN+ ID L K G AV++F +++
Sbjct: 308 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSE 367
Query: 217 --------RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
C P+ TY+++I+ K + A K +M++H P + TY L+N
Sbjct: 368 AMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLING 427
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
F + G + A FE+++ AG P+ +N L+ + RL+ MH GC+PD
Sbjct: 428 FCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPD 487
Query: 318 RASYNIMVDAYGRAGLHEGKCSYSLVE 344
+YN ++ G CS + VE
Sbjct: 488 VITYNCLIS---------GLCSANRVE 505
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY +L+ YC G +A+++ +E+ K G P+ Y+ I+ K ++A
Sbjct: 204 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 263
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F +M C P+ T+ +I + KA A+KLF EM CK I TY L+++
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 323
Query: 270 ARE-GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDR 318
++ G A ++F +L+GAG+ P + YN+L+ EA + M C P+
Sbjct: 324 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNV 383
Query: 319 ASYNIMVDA 327
+Y+I++D
Sbjct: 384 ITYSILIDG 392
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H +A + E+L P TY +L++ +C G + +A +VF +M+ GL P+A N+
Sbjct: 13 HDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 72
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ GL + G A+++F+ M+ P++ ++ +++ + A + AL +MR
Sbjct: 73 LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSS 132
Query: 255 CKPNICTYTALVNAFAREGLC---------EEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
TY ++ +GLC E+A E F++++ +G+EPD+ +Y+ L+ A
Sbjct: 133 SSVATGTYNLVL-----KGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALS 187
Query: 306 LISRM--------HMGCEPDRASYNIMVDAYGRAG 332
RM M C PD +YN+++D Y + G
Sbjct: 188 DSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIG 222
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y + ++ +C P TY++L+ C +++A +M+ +G P+ V Y I+G K
Sbjct: 371 YFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCK 430
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + A+ F++MK C P+T + +I+ KA ++ L+L M + CKP++ T
Sbjct: 431 CGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVIT 490
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y L++ E+A+ +F+ G P+V +N L+
Sbjct: 491 YNCLISGLCSANRVEDAQRLFD---GMACAPNVTTFNFLI 527
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 13/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y + +A+ E+L + P TY++++ YC +E+A VF +M +
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKASKSFM 242
P+AV +N+ I G K G + A+++F M++ C+ + TY TL+ +L K +
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+ LFN++ P I TY +L+ F EA + F++++G P+V Y+ L++
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILID 391
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+ RM G P +Y +++ + + G
Sbjct: 392 GLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + +A + ++ S +P T LL C G + A +FREM+
Sbjct: 37 VLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAG 96
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-- 241
P++ +N + G G + A+ Q M++ +T TY L++ +KS
Sbjct: 97 PFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANR 156
Query: 242 --MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A++ F EM++ +P++ +Y L++A + G EA +F + PD+ YN
Sbjct: 157 LEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNV 213
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAY 328
LM+ Y I + + G EP+ +Y+I+++ Y
Sbjct: 214 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 89 LPPTHATWDDLINVSVQLR-----------LNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
L PT T++ LI R + K P V+ + LI+ + K+
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSI---LIDGLCKVRRMKE 401
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A T ++ PT TY L+ +C G L+ A F +M+ G P+ V++N+ ID
Sbjct: 402 AAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLID 461
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K + + M + C+P TY +I+ A++ A +LF+ M C P
Sbjct: 462 GLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAP 518
Query: 258 NICTYTALVNAFAREGLCEEAEEIFE 283
N+ T+ L+ + EEA I +
Sbjct: 519 NVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N+ + GL+ +A+ +F+ + P+ TY ++I + K + A+ +F++M+S
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
PN T L+ G A ++F ++Q P ++N L+ + + R+
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRV 118
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+ E E+ + C P E T+ ++ + C GL+++A V M ++G V Y+S
Sbjct: 373 KEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+DGL G AVE+ R+K C+P T YT ++ + A +L EM C
Sbjct: 433 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDC 492
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+ T+ +V + ++GL + A + EQ+ G PD+ YN ++ +A
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552
Query: 306 LISRMH-MGCEPDRASYNIMV 325
L+S + GC+PD ++N ++
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLL 573
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ YC +G +E A + M PP +N I L G A+ +F M
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDM 277
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C PS TY+++++ K S A+ L +EMR+ C+P+I TY L+NA EG
Sbjct: 278 LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDV 337
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+EA I L G +PD Y ++ E L++ M C PD ++N +
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397
Query: 325 VDAYGRAGL 333
V + + GL
Sbjct: 398 VTSLCQQGL 406
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE ++ S C P E T+ ++ + C GLL +A + M + G P++ Y+
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D LLK G Q A+E+ M P TY +I+ KA K AL L M S+
Sbjct: 643 VDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----- 310
P+ TY +L RE + A + ++Q G+ PD YN ++ + R
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760
Query: 311 ---HM---GCEPDRASYNIMVDAYGRAGL 333
HM GC PD ++Y I+++A GL
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGL 789
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L++A C+ G + A AVF +M G PS V Y+ +D K ++A+ +
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL 308
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ C+P TY ++IN AL + + + SH CKP+ TYT ++ +
Sbjct: 309 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCG 368
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRM-----HM---GCEPDRAS 320
+E EE+ ++ PD +N ++ + L+ R HM GC D +
Sbjct: 369 SERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Query: 321 YNIMVDAYGRAG 332
Y+ ++D G
Sbjct: 429 YSSILDGLCDVG 440
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS 148
+P A +DD+ L++ P V+ + L++A ++S +++A E+
Sbjct: 267 IPDALAVFDDM--------LHRGCSPSVVTYSI---LLDATCKESGYRQAMALLDEMRAK 315
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
C P TY +L+ A C G +++A + + +G P AV Y + L ++
Sbjct: 316 GCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEV 375
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+ M + C P T+ ++ + A+++ + M H C +I TY+++++
Sbjct: 376 EELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDG 435
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPD 317
G ++A E+ +L+ G +PD AY +++ A L++ M C PD
Sbjct: 436 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPD 495
Query: 318 RASYNIMVDAYGRAGL 333
++N +V + + GL
Sbjct: 496 EVTFNTVVASLCQKGL 511
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 50/240 (20%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E+L S C P E T+ ++ + C GL+++A V +M + G P V YN
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537
Query: 196 IDGLLK-----------------GGNP------------------QKAVEIFQRMKRDCC 220
IDGL G P + A ++ M R C
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNC 597
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
P T+ +I + A++ M + C PN TY+ +V+A + G + A E
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE 657
Query: 281 IFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYG 329
+ + PD+ YN ++ EA L+ M G PD +Y + AYG
Sbjct: 658 LLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSL--AYG 713
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 143 LELLDSRCIPTED--TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
LELL T D TY ++ +G +E+A + R M GL P Y S G+
Sbjct: 656 LELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVC 715
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ +AV + +R++ P T Y ++ + + ++ +A+ F M S C P+
Sbjct: 716 REDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDES 775
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
TY L+ A A GL +EA+ + L G+
Sbjct: 776 TYVILLEALAYGGLLDEAKRLLASLCSLGV 805
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 23/144 (15%)
Query: 199 LLKGGNPQKAVEIFQRMK----RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
L++ G +A+ +F M R+C P ++I + A ++F +
Sbjct: 160 LVQRGEIDEALVLFDSMASGGGRNC--PPVVPCNILIKRLCSDGRVSDAERVFAALGPSA 217
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR----- 309
+ TY +VN + R G E+A + + G PD + +N L+ A + R
Sbjct: 218 ---TVVTYNTMVNGYCRAGRIEDARRL---INGMPFPPDTFTFNPLIRALCVRGRIPDAL 271
Query: 310 ------MHMGCEPDRASYNIMVDA 327
+H GC P +Y+I++DA
Sbjct: 272 AVFDDMLHRGCSPSVVTYSILLDA 295
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I+A+ QK + + ++++ P + L+ C G +++A + EM +
Sbjct: 264 LIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRR 323
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFM 242
G P+ + + IDGL K G +KA +F ++ R D +P+ TYT MIN Y K K
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNR 383
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A L + M+ PN TYT L++ + G A E+ + + G P++Y YNA++
Sbjct: 384 AEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID 443
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
EAYRL++++ + G + D +Y I++ + R
Sbjct: 444 GLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCR 482
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y ++ +AE + + +P +TY L+ +C G +A + M K G
Sbjct: 371 MINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEG 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ IDGL K G+ +A + ++ Q TYT++++++ + + + +L
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
FN+M P+I +YT L++ F R+ +E+E +FE+ G+ P Y +++ Y
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDA 327
+L RM + GC PD +Y ++
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 15/237 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCM 166
+ + W P V LI+ +K +KA +L+L+ S P TY ++ YC
Sbjct: 321 VRRGWKPNVY---THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCK 377
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
L +AE + M++ GL P+ Y + IDG K GN +A E+ M ++ P+ T
Sbjct: 378 EDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +I+ K A +L N++ H + + TYT L++ R+ + F ++
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497
Query: 287 GAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAG 332
G PD+++Y L+ E+ RL + +G P + +Y M+ Y R G
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++E+ P ++ L++ A C G + +AE M + G ID
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIID 267
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G + V F +M P+ +T +IN K A +L EM KP
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEAY----------RL 306
N+ T+T L++ ++G E+A +F +L + G +P+V+ Y A++ Y L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
+SRM G P+ +Y ++D + + G
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVG 414
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C ++ F +M K G P Y + I + +++ +F+
Sbjct: 472 TYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEA 531
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ +TYT MI Y + + +A+KLF M +H C P+ TY AL++ +E
Sbjct: 532 VSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKL 591
Query: 276 EEAEEIFEQLQGAGIEP 292
++A +++ + G+ P
Sbjct: 592 DDARNLYDAMMDKGLSP 608
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + +++ ++ + ++L P +Y L+ +C ++++E +F E
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSL 534
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ Y S I G + GN AV++FQRM C P + TY +I+ K SK A
Sbjct: 535 GLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
L++ M P T L + ++ A + ++L+
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 5/170 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ K++E + E + IPT+ TY ++ YC G A +F+ M +G
Sbjct: 511 LISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG 570
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P ++ Y + I GL K A ++ M P T + Y K S A+
Sbjct: 571 CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAI 630
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ + + + I T LV EG + A F +L EP+V
Sbjct: 631 NVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 47/209 (22%)
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA----VEIFQR-------- 214
+G L++A + EM+ GL PS N +D + G + A VE+ QR
Sbjct: 167 NGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226
Query: 215 ---MKRDCCQ--------------------PSTETYTLMINLYGKASKSFMALKLFNEMR 251
M CC T TL+I+ + + + F +M
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME--------- 302
PN+ +TAL+N ++G ++A E+ E++ G +P+VY + L++
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346
Query: 303 -AYRLISRM--HMGCEPDRASYNIMVDAY 328
A+RL ++ G +P+ +Y M++ Y
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGY 375
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 136 KKAEFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
K+AE L ++++ C P TY +L C SG A + R+M + + AV Y+
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
IDGL K G+ A +F M+ + TY ++I + A + KL +M
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------- 304
K PN+ T++ L+++F +EG EAEE+ +++ GI PD Y +L++ +
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 305 -RLISRM-HMGCEPDRASYNIMVDAYGRA 331
+++ M GC+P+ ++NI+++ Y +A
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 15/248 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WDD + ++ + +K +P V+ V LI+++ ++ ++AE + E++ P
Sbjct: 314 WDDGAKL-LRDMIKRKINPNVVTFSV---LIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C L+KA + M G P+ +N I+G K +E+F++M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
T TY +I + + K +A +LF EM S K PNI TY L++ G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
E+A EIFE+++ + +E D+ YN ++ +A+ L + + G +P +YNIM
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 325 VDAYGRAG 332
+ + G
Sbjct: 550 IGGLCKKG 557
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ +C G L A+ +F+EM +PP+ V Y +DGL G +KA+EIF+++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ + Y ++I+ ASK A LF + KP + TY ++ ++G
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EAE +F +++ G PD + YN L+ A+
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C +G + + R+M K + P+ V ++ ID +K G ++A E+ + M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P T TYT +I+ + K + A ++ + M S C PNI T+ L+N + +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
++ E+F ++ G+ D YN L++ + + ++++ E P+ +Y I+
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 325 VDAYGRAGLHE 335
+D G E
Sbjct: 480 LDGLCDNGESE 490
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y++++ C G L+ A +F EM G+ + + YN I G G ++ + M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P+ T++++I+ + K K A +L EM P+ TYT+L++ F +E +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMV 325
+A ++ + + G +P++ +N L+ Y +R+ G E D +YN ++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 326 DAYGRAG 332
+ G
Sbjct: 446 QGFCELG 452
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ L+ C+ G + +A + M + G P + N+ ++GL G +A+ +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M CQP+ TY ++N+ K+ ++ +A++L +M K + Y+ +++ +
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
G + A +F +++ GI ++ YN L+ + R G + P+ +
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 321 YNIMVDAYGRAG 332
+++++D++ + G
Sbjct: 336 FSVLIDSFVKEG 347
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++++ +C L A + ++ K G P+ + +++ I+GL G +A+E+ RM
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P T ++N + K A+ L ++M + C+PN TY ++N + G
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIM 324
A E+ +++ I+ D Y+ +++ A+ L + M M G + +YNI+
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 325 VDAYGRAG 332
+ + AG
Sbjct: 305 IGGFCNAG 312
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ A +FR+M P+ + ++ + K + + ++M+ + T ++M
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
IN + + K +A ++ +PN T++ L+N EG EA E+ +++ G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+PD+ N L+ EA LI +M GC+P+ +Y +++ ++G
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C G L +AE +FR+M + G P YN I L G+ K+V++
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 212 FQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
+ +KR T ++I++ G+ KSF+ +
Sbjct: 601 IEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY LL+ A M G +A + EM GL P YN I+G K GN +KA+EIF
Sbjct: 625 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 684
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ M R + + TYT +I K + KLF+E +P++ Y AL+N+ +
Sbjct: 685 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 744
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G + A EI +++ I PD YN LM EA +LI M G +PD +Y
Sbjct: 745 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 804
Query: 322 NIMVDAYGRAG 332
N ++ Y G
Sbjct: 805 NTLISGYSMKG 815
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C G ++KA +F M + G+ + V Y + I L K G Q+ ++F
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R +P Y +IN + + A ++ EM + P+ TY L+ G
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 782
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
+EA ++ +++ GI+PD+ YN L+ Y + M+ G P +YN +
Sbjct: 783 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 842
Query: 325 VDAYGRAG 332
+ + G
Sbjct: 843 IQGLCKNG 850
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY ++ +C G +++A VF EM G + P AV+YN+ I G G A+
Sbjct: 553 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 612
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
RM + TY L+++ + A +L EM P++ TY L+N
Sbjct: 613 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 672
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRA 319
+EG ++A EIFE + G+ V Y AL+ E +L + G PD
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 732
Query: 320 SYNIMVDAYGRAG 332
YN +++++ +G
Sbjct: 733 LYNALINSHSTSG 745
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ YC G L+ A M + G+ + YN + L G +A E+
Sbjct: 589 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 648
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P TY ++IN + K AL++F M + + TYTAL+ A ++
Sbjct: 649 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 708
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G +E +++F++ GI PD+ YNAL+ ++ + E PD +
Sbjct: 709 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768
Query: 321 YNIMV 325
YN ++
Sbjct: 769 YNTLM 773
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLK 201
LELL P TY ++ +C G ++ A + REMR + G+ P+ Y + I G K
Sbjct: 508 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 567
Query: 202 GGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G +AV++F M + +P Y +I Y K AL + M +
Sbjct: 568 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 627
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY LV+A +G EA E+ E++ G G+ PDV+ YN L+ +
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 671
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A +K ++ + + E + P Y L+ ++ SG +++A + EM K
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + GL G +A ++ M QP TY +I+ Y AL
Sbjct: 762 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 821
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ NEM + P + TY AL+ + G ++AE + +++ GI PD Y +L+E
Sbjct: 822 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A A+F +M + LP +N + L G P +A+E+ ++M R P+ TY +I
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527
Query: 233 LYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-I 290
+ + AL + EMR PN TY +++ + + G +EA ++F+++ G +
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587
Query: 291 EPDVYAYNALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
+P+ YNAL+ Y R++ R G A+YN++V A G G
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVER---GVAMTVATYNLLVHALFMDG--RG 642
Query: 337 KCSYSLVE 344
+Y LVE
Sbjct: 643 TEAYELVE 650
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ R P + TY L++ C+ G +++A + EM + G+ P V YN+ I G G
Sbjct: 756 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 815
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + A+ I M P+ TY +I K + A + EM + P+ TY
Sbjct: 816 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 875
Query: 264 ALVNAFAREGLCEEAEEIFE 283
+L+ EGL E E +
Sbjct: 876 SLI-----EGLTTEDERAID 890
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y K K A E+++ PT TY L++ C +G + AE + +EM + G
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866
Query: 185 LPPSAVVYNSYIDGL 199
+ P Y S I+GL
Sbjct: 867 ITPDDSTYISLIEGL 881
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A + L+D PT TY L+ A L + + ++ + G+ P ++++NS
Sbjct: 30 REAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSI 89
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+ + GN ++A+++F++MK C+P+T T+ +I YG A K+ ALKL ++
Sbjct: 90 INAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGV 149
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------- 304
KPN TY LV A+ + EEA + ++ +G++PD YN L AY
Sbjct: 150 KPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEE 209
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAG 332
++ ++ P+ + +I+V+ Y + G
Sbjct: 210 MILEMLNRRVTPNERTCSIIVNGYCKEG 237
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG-LLEKAEAVFREMRKY 183
L AY +K +AE LE+L+ R P E T ++++ YC G +++ + VFR M++
Sbjct: 194 LARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFR-MKEL 252
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ V+NS I G L + + E+ M+ + +P T++ ++N + A +
Sbjct: 253 GVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKC 312
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++FN+M + +P+I ++ L + R G E+AE I ++ G+ P+V ++
Sbjct: 313 KEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISG 372
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRA 331
+ +M +G P+ +Y ++ YG A
Sbjct: 373 WCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEA 411
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ YG ++A LE L D P + TY +L++A+C +E+A + +M
Sbjct: 124 LIKGYGNAGKTEEA-LKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVAS 182
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P AV YN+ + G +A E+ M P+ T ++++N Y K A
Sbjct: 183 GMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDA 242
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ PN+ + +L+ F E +E+ ++ G+ PDV ++ +M A
Sbjct: 243 SRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNA 302
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
+ RM EPD +++I+ Y RAG E
Sbjct: 303 WSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPE 345
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ G +A ++F + G P+ + Y + + L + + + + +++ +
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P + + +IN + ++ A+KLF +M+ CKP T+ L+ + G EEA
Sbjct: 79 MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL 138
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
++ E LQ G++P+ YN L+ EA+ ++ +M G +PD +YN + AY
Sbjct: 139 KLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAY 198
Query: 329 GRAG 332
G
Sbjct: 199 AEKG 202
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ + K+A + ++ +S C PT T+ L+K Y +G E+A + ++ G
Sbjct: 89 IINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGG 148
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN + N ++A + +M QP TY + Y + ++ A
Sbjct: 149 VKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAE 208
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM + + PN T + +VN + +EG +A +++ G+ P+++ +N+L++ +
Sbjct: 209 EMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGF 268
Query: 305 ----------RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+++ M G PD +++ +++A+ AG
Sbjct: 269 LDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAG 307
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A+ K + + +++ + P +++L K Y +G EKAE++ MRKYG
Sbjct: 299 IMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYG 358
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V+ + I G G + A++++++M P+ +TY +I YG+A + A
Sbjct: 359 VHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAE 418
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+L M P T + +A+ GL E+E
Sbjct: 419 ELLQVMEEKGVFPKKGTMQLIADAWRAIGLLSESE 453
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + ++ A+ SG +++A +FR+M++ G P+ +N+ I G G ++A+++
Sbjct: 81 PDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKL 140
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ ++ +P+ TY +++ + A + +M + +P+ TY L A+A
Sbjct: 141 LEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAE 200
Query: 272 EGLCEEAEEIFEQLQGAGIEPD-------VYAY---NALMEAYRLISRM-HMGCEPDRAS 320
+G AEE+ ++ + P+ V Y +++A R + RM +G P+
Sbjct: 201 KGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFV 260
Query: 321 YNIMVDAY 328
+N ++ +
Sbjct: 261 FNSLIKGF 268
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ ++ A+ +G ++K + +F +M K + P ++ G ++ G P+KA I
Sbjct: 291 PDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESI 350
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M++ P+ T +I+ + A K A+K++ +M PN+ TY L+ +
Sbjct: 351 LTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGE 410
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI 307
+AEE+ + ++ G+ P + +A+R I
Sbjct: 411 AKQPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAI 446
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C+ LM L GK K A +FN + KP + TYT LV A R+ L +
Sbjct: 10 CRIVRSRTKLMNVLIGKG-KPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSIL 68
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+ +++ G++PD +N+++ EA +L +M GC+P +++N ++ Y
Sbjct: 69 RLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGY 128
Query: 329 GRAGLHE 335
G AG E
Sbjct: 129 GNAGKTE 135
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY L+K CM + +A +F M+K G P+AV Y + I GL + GN A++
Sbjct: 158 IPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALK 217
Query: 211 IFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ + M D C+P TY+++I+ K + A +LF EM++ P++ +Y+
Sbjct: 218 LHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYST 277
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ F G ++++ +F+++ G++PD+ ++ L+ EA +L+ M G
Sbjct: 278 LIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRG 337
Query: 314 CEPDRASYNIMVDAYGRAG 332
P+ +YN ++D + G
Sbjct: 338 IVPNLITYNSLIDGFCMVG 356
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 135 HKKAEFT--YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM----RKYGL--P 186
H+ +E T +L + C P TY L+K C +G + A + +EM +YG+
Sbjct: 175 HRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCK 234
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P + Y+ IDGL K G +A E+F+ MK P +Y+ +I+ + A K + L
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
F+EM +P++ T++ L++ +EG EA+++ E + GI P++ YN+L++ + +
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCM 354
Query: 307 ISRMH-----------MGCEPDRASYNIMVDAYGRA 331
+ ++ G EPD SY +++ Y +
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKT 390
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E +Y L+ YC + +++A ++ EM + G P+ Y + + GL + G A ++
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK +++ Y + ++ K F A++LFNE++S+ K NI Y+ L++ +
Sbjct: 435 FGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G E A E+FE+L G++PDV YN ++ + + ++ GC PD +
Sbjct: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIA 554
Query: 321 YNIMVDAY 328
YN ++ +
Sbjct: 555 YNTLLCGF 562
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + K+A Y E+L P TY LLK G + A+ +F M+ YG
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ ++ +Y ++DGL K +A+E+F +K + + E Y+ +I+ KA K A
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF ++ +P++ TY +++ F + G + A +FE+++ G PD+ AYN L+
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVD 326
E +L+ +M P+ AS I+VD
Sbjct: 563 CEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T ++L C + +A A + + G P+ V Y + I GL +A +
Sbjct: 124 PDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL 183
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH------KCKPNICTYTAL 265
F RM++ C P+ TY +I + +ALKL EM + CKP + TY+ +
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGC 314
++ + G +EA+E+FE+++ G+ PDV +Y+ L+ + L M G
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303
Query: 315 EPDRASYNIMVDAYGRAG 332
+PD ++++++D + G
Sbjct: 304 QPDMVTFSVLIDTLCKEG 321
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 46/242 (19%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+++ + E++D P T+++L+ C G + +A+ + M + G+ P+ + YNS I
Sbjct: 290 QSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG G+ A E+F M +P +YT +IN Y K K A+ L+NEM
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKS 409
Query: 257 PNICTYTALVNAFAR------------------------------EGLCE-----EAEEI 281
PN+ TY L+ + +GLC+ EA E+
Sbjct: 410 PNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMEL 469
Query: 282 FEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAYGR 330
F +L+ + ++ Y+ L++ A+ L ++ G +PD +YNIM+ + +
Sbjct: 470 FNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529
Query: 331 AG 332
G
Sbjct: 530 VG 531
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 91 PTHATWDDLI-------NVSVQLRLNKKW-----------DPIVLMSCVSILLIEAYGQK 132
P T+ LI NV++ L+L+K+ P V+ + +I+ +
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSI---IIDGLCKV 250
Query: 133 SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY 192
+A+ + E+ IP +Y+ L+ +C +G ++++ +F EM G+ P V +
Sbjct: 251 GREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF 310
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ ID L K G +A ++ + M + P+ TY +I+ + A +LF M S
Sbjct: 311 SVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS 370
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
+P+ +YT L+N + + +EA ++ ++ G P+V Y L+ +
Sbjct: 371 KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGD 430
Query: 303 AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
A +L M G + Y I +D GL + C + +EL
Sbjct: 431 AKKLFGVMKTYGVSANSQIYGIFLD-----GLCKNDCLFEAMEL 469
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+ Y+ L+ C +G LE A +F ++ + GL P V YN I G K G A +F++
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M+ + C P Y ++ + + +K +KL ++M PN + T +V+ ++
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 18/170 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
MR + +PP + +N + GL K + + ++ M+ P T +++ N ++
Sbjct: 83 MRSHPIPPISS-FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL + PN+ TYT L+ E EA +F ++Q G P+ Y
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201
Query: 300 LMEAY------RLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
L++ + ++H + C+P +Y+I++D + G
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVG 251
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ +C G ++ A +F +M + G P + YN+ + G +G ++ +++
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
+M + P+ + T+++++ K K
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCKDEK 602
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A F M R P ++ ++ K + L+NEMR P++ T + L
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCE 315
N EA + G P+V Y L+ EA RL RM +GC
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 316 PDRASYNIMVDAYGRAG 332
P+ +Y ++ + G
Sbjct: 194 PNAVTYGTLIKGLCQTG 210
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ + + EKA+ +F EM + G+ P YN+ ID L +GG+ A E + M
Sbjct: 218 TYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDM 277
Query: 216 KRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+R P TY + + + AL++ + MR+ PN+ TY A++ G
Sbjct: 278 QRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGE 337
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNI 323
+EA I ++ G +PDV++YN L+ +A RLISRM G C P+R SYN+
Sbjct: 338 VDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNM 397
Query: 324 ---MVDAYGRA-------------GLHEGKCSYSLV 343
M+ A GR G H G +Y+++
Sbjct: 398 ILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVM 433
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RK 182
+LI + + +KA+ + E+++ P Y L+ A C G + A+ ++M R
Sbjct: 221 ILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRS 280
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P A Y ++ + + A+ + RM+ P+ TY +I L + +
Sbjct: 281 RGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDE 340
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A + NEM ++ KP++ +Y L+N + +A + ++ P+ ++YN +++
Sbjct: 341 AYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILK 400
Query: 303 AYRLISRMHMGCE-----------PDRASYNIMVDAYG-RAGLHEGKCSYSL 342
I R+ E P A+Y +M+ + G E CSY L
Sbjct: 401 MLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSYFL 452
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+ D + LL +AY +GL + A F M ++G P+ +S + L G + A E F
Sbjct: 146 SRDLFPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHA-EAF 204
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
R S +TYT++I+ + +K A KLF+EM +P++ Y AL++A R
Sbjct: 205 FRESPIQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRG 264
Query: 273 GLCEEAEEIFEQLQGA-GIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
G A+E + +Q + G+ PD Y + A R++ RM P+ +
Sbjct: 265 GDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFT 324
Query: 321 YNIMV 325
YN ++
Sbjct: 325 YNAVI 329
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 16/244 (6%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
DD +N+ V+L +++ P + + +L+ + A+ + E+LD +P
Sbjct: 432 DDAVNMKVKL-IDRGVSP---DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV 487
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
YA L+ + SG ++A VF + G+ V +N+ I G + G +A+ RM
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P TY+ +I+ Y K A+K+F M +KCKPN+ TYT+L+N F +G +
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA------------YRLISRMHMGCEPDRASYNIM 324
AEE F+++Q + P+V Y L+ + Y M C P+ ++N +
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 325 VDAY 328
+ +
Sbjct: 668 LQGF 671
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP +YA L++AYC S + A + +M + G P V Y I GL+ G+ AV
Sbjct: 377 IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVN 436
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++ P Y ++++ K + A LF+EM P+ Y L++ F
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRA 319
R G +EA ++F G++ DV +NA++ EA ++RM+ PD+
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 320 SYNIMVDAY 328
+Y+ ++D Y
Sbjct: 557 TYSTIIDGY 565
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 15/221 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + A + EL +PT +T+ ++ +C G ++ + E+++ G
Sbjct: 246 IIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L S N+ ID + G E + + C+P TY ++IN K K +A+
Sbjct: 306 LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAV 365
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+E PN +Y L+ A+ + + A ++ Q+ G +PD+ Y L+
Sbjct: 366 GFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG- 424
Query: 305 RLISRMHM-------------GCEPDRASYNIMVDAYGRAG 332
L+ HM G PD A YN+++ + G
Sbjct: 425 -LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY + + A L++ + C P TY +L+ +SG ++ A + ++ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P A +YN + GL K G A +F M P Y +I+ + ++ A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ K ++ + A++ F R G+ +EA ++ + PD + Y+ +++ Y
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 305 RLISRMHMG-----------CEPDRASYNIMVDAY 328
M C+P+ +Y +++ +
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
CIP Y ++ YC G +E A VF+E++ G P+ + + I+G K G+ +
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ +K + S +I+ + + + ++ CKP++ TY L+N
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL 355
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDR 318
+EG E A ++ G+ P+ +Y L++AY L+ GC+PD
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 319 ASYNIMVDAYGRAG 332
+Y I++ +G
Sbjct: 416 VTYGILIHGLVVSG 429
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 50/192 (26%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++K +C SG+L++A A M + L P Y++ IDG +K + A++IF+ M+++
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMR---------------------------- 251
C+P+ TYT +IN + MA + F EM+
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 252 --------SHKCKPNICTYTALVNAFARE--------------GLCEEAEEIFEQLQGAG 289
++KC PN T+ L+ F ++ G E F +++ G
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705
Query: 290 IEPDVYAYNALM 301
AYN+ +
Sbjct: 706 WSDHAAAYNSAL 717
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 13/190 (6%)
Query: 155 DTYA--LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
D Y+ +L+K C G +E + G P+ V YN+ I G K G+ + A +F
Sbjct: 204 DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF 263
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ +K P+ ET+ MIN + K + +L +E++ + ++ +++A R
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRH 323
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM-----EAYRLISRMHM------GCEPDRASY 321
G + E + +PDV YN L+ E + ++ + G P+ SY
Sbjct: 324 GYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY 383
Query: 322 NIMVDAYGRA 331
++ AY ++
Sbjct: 384 APLIQAYCKS 393
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 125 LIEAYGQKSLHKKAEFTY---LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
++ AY + KA Y +EL DS +P LL S L A V+ EM
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR----DCCQPSTETYTLMINLYGKA 237
G S Y++ I L+KG + VE+ +++ C P+ Y +I Y K
Sbjct: 198 DRG--DSVDNYSTCI--LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A +F E++ P + T+ ++N F +EG ++ + +++ G+ V+
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 298 NALMEA-----YRLISRMHMG------CEPDRASYNIMVDAYGRAGLHE 335
N +++A Y++ +G C+PD A+YNI+++ + G E
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 15/249 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ + V +R + P V + I LI G+ KA + ++D C P +
Sbjct: 131 WESALKVFELMRDQVWYRPYV---GIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLE 187
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+Y L+ AY SG ++A ++ M+ G P Y+ I L + K ++
Sbjct: 188 SYTALVSAYSRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLAD 247
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M +P+T TY +++ YGKA + EM S KCKP++ T + + AF G
Sbjct: 248 MACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQ 307
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHMGCEPDR--------ASYNI 323
E E +E+ Q +GI P++ YN L+++Y ++ +M E + +YN+
Sbjct: 308 IEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNV 367
Query: 324 MVDAYGRAG 332
++DA+GRAG
Sbjct: 368 VIDAFGRAG 376
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AYG+ + E T LE+L +C P T L+A+ SG +E E+ + + + G
Sbjct: 263 LVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQASG 322
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN +D K +K + + M++ + TY ++I+ +G+A
Sbjct: 323 ISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQME 382
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M+S + KPN T +L+ A+ R ++ E + ++ + D+ +N L++AY
Sbjct: 383 YIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTTLDIVFFNCLVDAY 442
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 206 QKAVEIFQRMKRDCC-QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ A+++F+ M+ +P Y +I + GK + A +LF M C PN+ +YTA
Sbjct: 132 ESALKVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTA 191
Query: 265 LVNAFAREGLCEEAEEIFEQLQGA-GIEPDVYAYNALME----AYR------LISRMHMG 313
LV+A++R G + A + ++++ G PDV Y+ L++ AY L++ M G
Sbjct: 192 LVSAYSRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACG 251
Query: 314 -CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
P+ +YN +VDAYG+AG S L LS K P
Sbjct: 252 GIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKP 290
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ AY +G + E+ EM P NS + G +
Sbjct: 255 PNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESC 314
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++ + P+ +TY ++++ YGKA + M+ + I TY +++AF R
Sbjct: 315 YEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGR 374
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCEPDR 318
G E+ E IF ++ I+P+ +L+ AY R+I + D
Sbjct: 375 AGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVLRIIE--NSDTTLDI 432
Query: 319 ASYNIMVDAYGRAG 332
+N +VDAYGR G
Sbjct: 433 VFFNCLVDAYGRVG 446
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
++C D Y ++++ +G+L +A VF M+ PS V YN I+ G K
Sbjct: 4 AKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGK 63
Query: 208 AVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+++FQ MKR+ +P TY +I+ + + A KL +EMR N+ TY++++
Sbjct: 64 ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HM---GCE 315
+ +E EE+ ++ E++ AG PDV+A+N +M+ + + M HM G +
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK 183
Query: 316 PDRASYNIMVDAYGRAG 332
PD SY+I++ + G
Sbjct: 184 PDNVSYHILIHGLAKIG 200
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 114/222 (51%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RK 182
+++ + + + +KA Y +++S P +Y +L+ G L+++ + EM R
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G P+ + +++ I GL + G +KA+E+F M C+P+ TYT +I +A K
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALM 301
A +LF +M P+ Y +L+ + + G +EAE+++ ++ GAG++P + +N L+
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+ + + ++ RA N +V G GL C+Y ++
Sbjct: 337 DGFCKLGKL------GRA--NELVAEMGTKGLAADTCTYRIL 370
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RK 182
++++ + + +A + + C+P+ TY +L+ + C +G KA +F+ M R+
Sbjct: 15 FVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKRE 74
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P YN+ I GL GN + A ++ M+ + TY+ +I K +K
Sbjct: 75 KRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEE 134
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+ K+ EM + C P++ + ++ FAR E+A E+++ + +G +PD +Y+ L+
Sbjct: 135 SYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH 194
Query: 302 ---------EAYRLISRMHM---GCEPDRASYNIMVDAYGRAG 332
E+ +++S M M G P+ +++ ++ R G
Sbjct: 195 GLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 143 LELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLL 200
E + CIP + Y L+ YC G +++AE ++REM GL P+ V +N+ IDG
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G +A E+ M T TY ++I +A+K AL+++ +MR K +
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 400
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
+ + V + G ++A +FE + +G P+ + L E+ + R+
Sbjct: 401 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 451
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + C + Y ++ KA AL++F M+S C P++ TY L+N+ G
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 275 CEEAEEIFEQLQGAG-IEPDVYAYNALM 301
+A ++F+ ++ +EPD + YN L+
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLI 88
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
M KC Y +V + A+ G+ +A E+FE ++ P + YN L+
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 302 --EAYRLISRM--HMGCEPDRASYNIMVDAYGRAGLHEG 336
+A L M EPDR +YN ++ +G EG
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEG 99
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++C G + A++VF + K+GL PS V +N+ ++G +K G+ + + + M+
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQ 202
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK +LF+EM PN T+T L++ + G +
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVD 262
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 263 LAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 322
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 323 DGSCKEGDLETAFEY 337
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 268 YKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 327
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 328 EGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 387
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
YT ++N F ++G ++ +++Q G P V YN LM
Sbjct: 388 YTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L LN+ + M +
Sbjct: 156 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVY 211
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 212 TYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 271
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P V YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 272 LSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 331
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 332 ETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 391
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 392 INEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + K G + A +F + + +PS ++ ++N Y K
Sbjct: 128 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 187
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L M++ +P++ TY+ L+N +E ++ E+F+++ G+ P+
Sbjct: 188 LGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVT 247
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 248 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLI--YGLCKKGDLKQAQDLIDE 305
Query: 345 LSVK 348
+S+K
Sbjct: 306 MSMK 309
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 126/290 (43%), Gaps = 34/290 (11%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN------------VSVQLRLNKKWD 113
++ LRFV EV + P T++ L+N V + K +D
Sbjct: 244 VEEALRFV-LEVSE-------EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P V LI + +KA +++ C P TY L+ A C +E A
Sbjct: 296 PDVYTYNS---LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ R + GL P +N+ I GL N A+E+F+ MK C+P TY+++I+
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ AL L EM S C N Y L++ + E+AEEIF+Q++ G+
Sbjct: 413 LCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS 472
Query: 294 VYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
YN L+ EA +L+ +M M G +PD+ +YN ++ + R G
Sbjct: 473 SVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C+ T + +L+ +C G +E+A E+ + G P V +NS ++G + G
Sbjct: 218 QMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 277
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N A++I M P TY +I+ K + A+++ +M +C PN TY
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYN 337
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HM 312
L++A +E E A ++ L G+ PDV +N L++ A + M +
Sbjct: 338 TLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397
Query: 313 GCEPDRASYNIMVDA 327
GC+PD +Y+I++D+
Sbjct: 398 GCKPDEFTYSILIDS 412
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + C P E TY++L+ + C L++A + +EM G +AVVYN+ IDGL K
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A EIF +M+ S+ TY +I+ K + A +L ++M KP+ T
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y +L+ F R G E+A +I + + G EPD++ Y L+
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLI 550
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 117 LMSCVSI-LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
L++ VS+ +L+ + ++ ++A LE+ + P + T+ L+ +C G + A
Sbjct: 225 LLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALD 284
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+ M + G P YNS I G+ K G +KA+EI Q+M C P+T TY +I+
Sbjct: 285 IVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALC 344
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K ++ A L + S P++CT+ L+ + A E+FE+++ G +PD +
Sbjct: 345 KENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEF 404
Query: 296 AYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
Y+ L+ EA L+ M GC + YN ++D ++
Sbjct: 405 TYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K E + ++++ + T+ +L+KA C + L A + EM +GL P + + +
Sbjct: 140 KLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTL 199
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ G ++ G+ A+++ ++M C + + +++N + K + AL+ E+
Sbjct: 200 MQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGF 259
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+ T+ +LVN F R G +A +I + + G +PDVY YN+L+ +A
Sbjct: 260 SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIE 319
Query: 306 LISRMHM-GCEPDRASYNIMVDA 327
++ +M + C P+ +YN ++ A
Sbjct: 320 ILQQMILRECSPNTVTYNTLISA 342
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI++ + K+A E+ S C Y L+ C S +E AE +F +M
Sbjct: 408 ILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELL 467
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S+V YN+ IDGL K ++A ++ +M + +P TY ++ + + A
Sbjct: 468 GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKA 527
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M S+ C+P+I TY L+ R G + A ++ +Q GI +AYN +++A
Sbjct: 528 GDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQA 587
Query: 304 YRLISRMHMG 313
+ R G
Sbjct: 588 LFMRKRTKEG 597
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + Y + L A L+ E + +M G+ +N I L K + A+ +
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P T+T ++ + + ALK+ +M + C + LVN F +
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG EEA ++ G PD +N+L+ + I ++ G +PD +
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300
Query: 321 YNIMVDAYGRAGLHE 335
YN ++ + G E
Sbjct: 301 YNSLISGMCKLGEFE 315
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
IVL +LI+A + + A E+ + P E T+ L++ + G L A
Sbjct: 154 IVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGAL 213
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ ++M YG + V ++G K G ++A+ + + P T+ ++N +
Sbjct: 214 KMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGF 273
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ AL + + M P++ TY +L++ + G E+A EI +Q+ P+
Sbjct: 274 CRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333
Query: 295 YAYNAL---------MEAYRLISRMHM--GCEPDRASYNIMVDA 327
YN L +EA ++R+ + G PD ++N ++
Sbjct: 334 VTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQG 377
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+L S IP T+A L++++ +E + + G P YN ++ L++
Sbjct: 80 QLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELGFKPDTNFYNIALNALVED- 136
Query: 204 NPQKAVEIFQ-RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
N K VE+ +M + T+ ++I KA + A+ + EM +H KP+ T+
Sbjct: 137 NKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITF 196
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
T L+ F EG A ++ +Q+ G G + L+ EA R + +
Sbjct: 197 TTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE 256
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
G PD+ ++N +V+ + R G
Sbjct: 257 EGFSPDQVTFNSLVNGFCRIG 277
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY LL +C G +EKA + + M G P Y + I GL + G A ++
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL 565
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ ++ + Y +I ++ ++LF EM P+ AL +
Sbjct: 566 LRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPD-----ALTHKIVF 620
Query: 272 EGLC------EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
GLC +EA + ++ GI P+ ++ L E
Sbjct: 621 RGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEG 658
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 31/224 (13%)
Query: 140 FTYLELLDSRC--------------IPTED------TYALLLKAYCMSGLLEKAEAVFRE 179
FTY LLD+ C +PT++ TY+ ++ Y G L+ A +F E
Sbjct: 332 FTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNE 391
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G+ V YN+ + K G ++A+++ + M+ + TY ++ YGK +
Sbjct: 392 MKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYR 451
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
++F EM+ + PN+ TY+ L++ +++ GL +EA E+F + + AG++ DV Y+A
Sbjct: 452 YDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSA 511
Query: 300 LMEA----------YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++A L+ M G P+ +YN ++DA+GR+
Sbjct: 512 LIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSA 555
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLH-KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + KK + +L + P T+ LL GL E A +F M
Sbjct: 266 VIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDK 325
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN+ +D + KGG A EI M P+ TY+ MI+ Y K + A
Sbjct: 326 GIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDA 385
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +FNEM+ + +Y L++ +A+ G E+A ++ ++++ AGI DV YNAL+
Sbjct: 386 LNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAG 445
Query: 304 Y----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
Y R+ M G P+ +Y+ ++D Y + GL++
Sbjct: 446 YGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYK 488
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVEIFQRM 215
++ L+ AY SG +A VF M+ GL P+ V YN+ ID KGG +K VEIF M
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ QP T+ ++ + + A +LF+ M +I TY L++A + G
Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQM 347
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
+ A EI ++ I P+V Y+ +++ Y + R+ +G DR SYN +
Sbjct: 348 DLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTL 407
Query: 325 VDAYGRAGLHE 335
+ Y + G E
Sbjct: 408 LSVYAKLGRFE 418
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 27/206 (13%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ YG++ + + + E+ R P TY+ L+ Y GL ++A VFRE ++ G
Sbjct: 442 LLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAG 501
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS------ 238
L V+Y++ ID L K G + +V + M ++ +P+ TY +I+ +G+++
Sbjct: 502 LKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVV 561
Query: 239 -----------KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE------- 280
+S ++ + + S + A E CE
Sbjct: 562 DDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILC 621
Query: 281 ---IFEQLQGAGIEPDVYAYNALMEA 303
+F+++ I+P+V ++A++ A
Sbjct: 622 ILGVFQKMHELKIKPNVVTFSAILNA 647
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV----FREMRKYG 184
YG+ K E L C P D Y LL+ G + A+AV F R+ G
Sbjct: 132 YGKDD--KALENVLLNFESRLCGP--DDYTFLLRELGNRG--DSAKAVRCFEFAVRRESG 185
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ ++ I L + G + A +F ++ + ++ +I+ YG++ A+
Sbjct: 186 KNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAI 245
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGL-CEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
K+F+ M+S+ PN+ TY A+++A + G+ ++ EIF+ + G++PD +N+L+
Sbjct: 246 KVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAV 305
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A RL S M G + D +YN ++DA + G
Sbjct: 306 CSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGG 345
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 36/248 (14%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + L+K+A + E + Y+ L+ A C +GL+E + + EM K G
Sbjct: 477 LIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEG 536
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVE--------IFQRMKRDCCQPSTETYTL------M 230
+ P+ V YNS ID + + Q V+ + + Q + E+ +
Sbjct: 537 IRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRI 596
Query: 231 INLYGK--ASKSFMA-----------LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
I ++GK A K+ A L +F +M K KPN+ T++A++NA +R E+
Sbjct: 597 IEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFED 656
Query: 278 AEEIFEQL-----QGAGIEPDV---YAYNALMEAYRLISRMH-MGCEPDRASYNIMVDAY 328
A + E+L Q G+ + Y N ++A L + M A YN + D
Sbjct: 657 ASMLLEELRLFDNQVYGVAHGLLMGYRENVWLQAQSLFDEVKLMDSSTASAFYNALTDML 716
Query: 329 GRAGLHEG 336
G G
Sbjct: 717 WHFGQKRG 724
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 203 GNPQKAVEIFQ-RMKRDCCQ-PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G+ KAV F+ ++R+ + + + MI+ G+ K +A +F+ +
Sbjct: 167 GDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVY 226
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------YRLI-----S 308
++AL++A+ R G C EA ++F+ ++ G+ P++ YNA+++A ++ +
Sbjct: 227 AFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDG 286
Query: 309 RMHMGCEPDRASYNIMVDAYGRAGLHEG 336
+ G +PDR ++N ++ R GL E
Sbjct: 287 MLSNGVQPDRITFNSLLAVCSRGGLWEA 314
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 39/260 (15%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
+++PP+ +T+++LIN A G ++A ++
Sbjct: 207 EAIPPSRSTYNNLIN--------------------------ACGSSGNWREALKVSKQMT 240
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++ P T+ ++L AY KA + F M+ + P N I L+K G +
Sbjct: 241 ENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCE 300
Query: 207 KAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
KA++IF M KR C+P T+T +I+LY + + +F+ M + P I +Y A
Sbjct: 301 KAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNA 360
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG- 313
L+ A+A G+ EEA +F++++ +G+ PDV +Y +L+ +Y + + M
Sbjct: 361 LIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAK 420
Query: 314 CEPDRASYNIMVDAYGRAGL 333
+P+ S+N ++DAYG GL
Sbjct: 421 LKPNVVSFNALIDAYGSNGL 440
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 87/156 (55%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ C P T+ ++ Y +SG +E +AVF M GL P+ V YN+ I G ++
Sbjct: 314 AECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEE 373
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ +F+++K P +YT +++ YG++ + A ++FN M+ K KPN+ ++ AL++
Sbjct: 374 ALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALID 433
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
A+ GL +A ++ +++ GI P++ L+ A
Sbjct: 434 AYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAA 469
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 107/225 (47%), Gaps = 13/225 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + +L +A + E+ + RC P +TY L+ A+ +G A + +M +
Sbjct: 148 MMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLRE 207
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+PPS YN+ I+ GN ++A+++ ++M + P T+ ++++ Y ++ A
Sbjct: 208 AIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKA 267
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE--PDVYAYNALM 301
L F M+ +P+ T ++ + G CE+A +IF ++ E PD+ + +++
Sbjct: 268 LSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSII 327
Query: 302 EAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
Y L ++ G P SYN ++ AY G+ E
Sbjct: 328 HLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSE 372
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + + +L PT +Y L+ AY G+ E+A +VF++++ G
Sbjct: 326 IIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASG 385
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y S + + P+KA E+F MK+ +P+ ++ +I+ YG A+
Sbjct: 386 LLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAV 445
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ EM PNI T L+ A R G + + + GI+ + A N+ + +Y
Sbjct: 446 KVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSY 505
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDA------YGRA 331
+ S M P+ +Y +++ YG+A
Sbjct: 506 MNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKA 549
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 25/258 (9%)
Query: 102 VSVQLRLNKKWD--PIVLMSCVSIL-------LIEAYGQKSL--HKKAEFTYLELLDSRC 150
VS L LN K+D +VL + LI+ Q+ H F +++L + C
Sbjct: 81 VSKILELNPKYDDVEVVLNHWIGRFARKNFPRLIKEITQRGALEHSNLVFRWMKLQKNYC 140
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
T D Y ++++ + L ++A +F EM+++ P + YN+ I+ + G + A+
Sbjct: 141 ART-DMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMN 199
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + M R+ PS TY +IN G + ALK+ +M + P++ T+ +++A+
Sbjct: 200 IMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYK 259
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPD 317
+A FE ++G I PD N + ++ + + C PD
Sbjct: 260 TGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPD 319
Query: 318 RASYNIMVDAYGRAGLHE 335
++ ++ Y +G E
Sbjct: 320 IVTFTSIIHLYSLSGQVE 337
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +YG+ KKA + + ++ P ++ L+ AY +GLL A V REM + G
Sbjct: 396 LLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDG 455
Query: 185 LPPSAVVY-----------------------------------NSYIDGLLKGGNPQKAV 209
+ P+ V NS I + G +KAV
Sbjct: 456 IHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAV 515
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ M++ P++ TYT++I+ K SK A++ F +M K ++++ A+
Sbjct: 516 ALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAY 575
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE--PDRASYNIMVDA 327
+++G EAE IF ++ AG PD+ + A++ AY C+ + Y+I +D
Sbjct: 576 SKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDT 635
Query: 328 YGRAGL 333
+ L
Sbjct: 636 IACSAL 641
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQR--------------MKRDCCQPSTETYTLMINLYG 235
VV N +I + P+ EI QR ++++ C T+ Y +MI L+
Sbjct: 96 VVLNHWIGRFARKNFPRLIKEITQRGALEHSNLVFRWMKLQKNYC-ARTDMYNMMIRLHA 154
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+ + + A LF EM+ +CKP+ TY AL+NA R G A I E + I P
Sbjct: 155 RHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRS 214
Query: 296 AYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
YN L+ EA ++ +M G PD ++NI++ AY + SY
Sbjct: 215 TYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSY 270
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 161 LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
+ +Y G EKA A++ MRK + P++V Y I G K KA+E F M
Sbjct: 502 IGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKI 561
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+ E + +I Y K + A +F M+ C P+I T+TA+++A+ +A +
Sbjct: 562 ALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACD 621
Query: 281 IFEQLQGAGIEPDVYAYNALMEAY 304
+ ++++ I+ D A +ALM A+
Sbjct: 622 LIQEMEDYDIQLDTIACSALMRAF 645
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I +Y ++KA Y + + P TY +L+ C KA F +M + +
Sbjct: 502 IGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKI 561
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
+ V +S I K G +A IF MK C P T+T M++ Y A
Sbjct: 562 ALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACD 621
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREG 273
L EM + + + +AL+ AF + G
Sbjct: 622 LIQEMEDYDIQLDTIACSALMRAFNKRG 649
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 86/218 (39%), Gaps = 35/218 (16%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
I L V +I AY ++ +AE + + + C P T+ +L AY KA
Sbjct: 561 IALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKAC 620
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV---------------EIFQRMKRDC 219
+ +EM Y + + ++ + K GNP + + IF M C
Sbjct: 621 DLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSAC 680
Query: 220 C---------------QPSTETYTL-----MINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+PS ++ ++++ G++ K +KLF ++ + + N
Sbjct: 681 SLLRDWRTILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINF 740
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
TY+ ++ G + E+ E ++ AGI+P + Y
Sbjct: 741 NTYSIMLKNLLAVGNWRKYIEVLEWMEDAGIQPSIGMY 778
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+ A M G +A + EM GL P YN I+G K GN +KA+EIF+ M
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 682
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R + + TYT +I K + KLF+E +P++ Y AL+N+ + G
Sbjct: 683 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 742
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A EI +++ I PD YN LM EA +LI M G +PD +YN +
Sbjct: 743 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 802
Query: 325 VDAYGRAG 332
+ Y G
Sbjct: 803 ISGYSMKG 810
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C G ++KA +F M + G+ + V Y + I L K G Q+ ++F
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R +P Y +IN + + A ++ EM + P+ TY L+ G
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
+EA ++ +++ GI+PD+ YN L+ Y + M+ G P +YN +
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 837
Query: 325 VDAYGRAG 332
+ + G
Sbjct: 838 IQGLCKNG 845
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY ++ +C G +++A VF EM G + P AV+YN+ I G G A+
Sbjct: 548 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 607
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
RM + TY L+++ + A +L EM P++ TY L+N
Sbjct: 608 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 667
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRA 319
+EG ++A EIFE + G+ V Y AL+ E +L + G PD
Sbjct: 668 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 727
Query: 320 SYNIMVDAYGRAG 332
YN +++++ +G
Sbjct: 728 LYNALINSHSTSG 740
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ YC G L+ A M + G+ + YN + L G +A E+
Sbjct: 584 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 643
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P TY ++IN + K AL++F M + + TYTAL+ A ++
Sbjct: 644 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 703
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G +E +++F++ GI PD+ YNAL+ ++ + E PD +
Sbjct: 704 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763
Query: 321 YNIMV 325
YN ++
Sbjct: 764 YNTLM 768
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLK 201
LELL P TY ++ +C G ++ A + REMR + G+ P+ Y + I G K
Sbjct: 503 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 562
Query: 202 GGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G +AV++F M + +P Y +I Y K AL + M +
Sbjct: 563 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 622
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY LV+A +G EA E+ E++ G G+ PDV+ YN L+ +
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 666
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A +K ++ + + E + P Y L+ ++ SG +++A + EM K
Sbjct: 697 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 756
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + GL G +A ++ M QP TY +I+ Y AL
Sbjct: 757 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 816
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ NEM + P + TY AL+ + G ++AE + +++ GI PD Y +L+E
Sbjct: 817 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A A+F +M + LP +N + L G P +A+E+ ++M R P+ TY +I
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522
Query: 233 LYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-I 290
+ + AL + EMR PN TY +++ + + G +EA ++F+++ G +
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582
Query: 291 EPDVYAYNALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
+P+ YNAL+ Y R++ R G A+YN++V A G G
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVER---GVAMTVATYNLLVHALFMDG--RG 637
Query: 337 KCSYSLVE 344
+Y LVE
Sbjct: 638 TEAYELVE 645
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ R P + TY L++ C+ G +++A + EM + G+ P V YN+ I G G
Sbjct: 751 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 810
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + A+ I M P+ TY +I K + A + EM + P+ TY
Sbjct: 811 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 870
Query: 264 ALVNAFAREGLCEEAEEIFEQ 284
+L+ EGL E E +
Sbjct: 871 SLI-----EGLTTEDERAIDD 886
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y K K A E+++ PT TY L++ C +G + AE + +EM + G
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861
Query: 185 LPPSAVVYNSYIDGL 199
+ P Y S I+GL
Sbjct: 862 ITPDDSTYISLIEGL 876
>gi|357480587|ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 706
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 143 LELLDSRCIPTEDT--YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
L+ + + IPT + Y + LK + L+ AE VF EM + G+ P V +++ I
Sbjct: 168 LQYVQRKSIPTREVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCAR 227
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
P KAVE F++M C+P TY++MI+ YGKA MAL L++ R+ K +
Sbjct: 228 SCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPA 287
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---------RLISRMH 311
T++ L+ + G + ++E+++ G++P++ YN L++A R I +
Sbjct: 288 TFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEM 347
Query: 312 MGCE--PDRASYNIMVDAYGRAGLHE 335
+ + P+RA+Y ++ AYGRA E
Sbjct: 348 INNDILPNRATYASLLHAYGRARFCE 373
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A G+ +A Y E++++ +P TYA LL AY + E A V+REMR+
Sbjct: 327 LLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMREKE 386
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMA 243
+ + +YNS + G A EIF+ MK D C P + T++ +I +Y + + A
Sbjct: 387 MDLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEA 446
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
++ NEM +P I T+LV + + ++ + F QL GIEPD
Sbjct: 447 ERMMNEMIESGFEPTIFVLTSLVQCYGKAKRTDDVVKTFNQLLDMGIEPD 496
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L+K Y ++G + V+ EM+ G+ P+ VVYN+ +D + + P +A I++ M
Sbjct: 288 TFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEM 347
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TY +++ YG+A AL ++ EMR + N Y +L+ A G
Sbjct: 348 INNDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYT 407
Query: 276 EEAEEIFEQLQGAGI-EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNI 323
+ A EIFE ++ + PD + +++L+ EA R+++ M G EP
Sbjct: 408 DLAFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTS 467
Query: 324 MVDAYGRA 331
+V YG+A
Sbjct: 468 LVQCYGKA 475
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL--- 274
D C+P+ + ++ G A+ + N M + P + Y + RE +
Sbjct: 126 DSCEPTEHDVSQILKCLGDKVIEQDAVIIINNMENSVVVPFVLQYVQRKSIPTREVILYN 185
Query: 275 --------CEE---AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
C++ AE++F ++ G++PD ++ ++ +A +M +
Sbjct: 186 VTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLF 245
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GCEPD +Y++M+D+YG+AG
Sbjct: 246 GCEPDDVTYSVMIDSYGKAG 265
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ C P TY ++ C +E+A + + G+ P YNS I GL
Sbjct: 361 QMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSR 420
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N A+E+++ MK C P TY ++I+ K AL L EM C N+ TY
Sbjct: 421 NHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYN 480
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
L++ F + EAEEIF+Q++ G+ + YN L+ EA +L+ +M M
Sbjct: 481 TLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIME 540
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD+ +YN ++ + +AG
Sbjct: 541 GLRPDKFTYNSLLTYFCKAG 560
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLKG 202
+++++ C+ T T +L+ +C G +E+A EM + G P +N ++GL K
Sbjct: 255 QMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKT 314
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G+ + A+E+ M R+ P TY +I+ K + A+K+ N+M C PN TY
Sbjct: 315 GHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTY 374
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM---------- 312
+++ +E EEA ++ L G GI PDV YN+L++ L SR H
Sbjct: 375 NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL-SRNHTVAMELYKEMK 433
Query: 313 --GCEPDRASYNIMVDA 327
GC PD +YN+++D+
Sbjct: 434 TKGCHPDEFTYNMLIDS 450
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 139 EFTYLELLDSRCIPTE--------------------DTYALLLKAYCMSGLLEKAEAVFR 178
EFTY L+DS C + TY L+ +C + + +AE +F
Sbjct: 441 EFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFD 500
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
+M G+ ++V YN+ IDGL K ++A ++ +M + +P TY ++ + KA
Sbjct: 501 QMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAG 560
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A + M S C+P+I TY L+ + G E A ++ +Q GI +AYN
Sbjct: 561 DIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYN 620
Query: 299 ALM----------EAYRLISRMHMGCE-PDRASYNIMVDAYGRAGLHEGKCSYSLVELSV 347
++ EA RL M E PD +Y I+ + G G+ ++E+
Sbjct: 621 PVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLE 680
Query: 348 KHY 350
+ Y
Sbjct: 681 RGY 683
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 42/346 (12%)
Query: 16 RDGFFIDK-------NGKLRSFNHKKLSRKRCGSLRGKG-----WKYGS--------GFV 55
R+GFF DK NG L H K + + + +G + Y S G V
Sbjct: 294 REGFFPDKYTFNMLVNG-LSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEV 352
Query: 56 DGIFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPI 115
D VL+ + ++R+ NT+ ++++ T ++ + + +L L I
Sbjct: 353 DEAVKVLN-------QMIERDCSPNTV--TYNTIISTLCK-ENQVEEATKLALVLTGKGI 402
Query: 116 VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
+ C LI+ H A Y E+ C P E TY +L+ + C G L++A
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+ +EM G + + YN+ IDG K +A EIF +M+ ++ TY +I+
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K+ + A +L ++M +P+ TY +L+ F + G ++A +I + + G EPD+
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582
Query: 296 AYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
Y L+ A +L+ + M G +YN ++ A R
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFR 628
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K E + ++ P T+ +L+KA C + + A + EM +GL P + +
Sbjct: 177 KLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTI 236
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK- 254
+ G ++ GN A+ + ++M C + T +++N + K + AL+ EM +
Sbjct: 237 MQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREG 296
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
P+ T+ LVN ++ G + A E+ + + G +PD+Y YN+L+ EA
Sbjct: 297 FFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAV 356
Query: 305 RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+++++M C P+ +YN ++ + E +LV
Sbjct: 357 KVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 124/304 (40%), Gaps = 36/304 (11%)
Query: 60 PVLSPTAQQILRFVQREVDSNTIWDAF------DSLPPTHATWDDLINVSVQLRLNKKWD 113
P +PT Q+L ++RE DS+ + F + P+ + + ++++ +L ++D
Sbjct: 52 PNFTPT--QLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLH---KLGKAGEFD 106
Query: 114 PI--------VLMSCVS----ILLIEAYGQKSLHKKA-EFTYLELLDSRCIPTEDTYALL 160
+ + +S + ++ IE+Y L+ + +F ++ + Y L
Sbjct: 107 AMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFL 166
Query: 161 LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
L L+ E M G+ P +N I L + + A+ + + M+
Sbjct: 167 LNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGL 226
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
P +T+T ++ + + A+++ +M C T LVN F +EG EEA
Sbjct: 227 LPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALR 286
Query: 281 IFEQLQ-GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
E++ G PD Y +N L+ A ++ M G +PD +YN ++
Sbjct: 287 FIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGL 346
Query: 329 GRAG 332
+ G
Sbjct: 347 CKLG 350
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA + C P TY L+ C +G +E A + R ++ G+ + YN
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPV 622
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
I L + ++AV +F+ M P TY ++
Sbjct: 623 IQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 131/266 (49%), Gaps = 24/266 (9%)
Query: 89 LPPTHATWDDLI-------NVSVQLRLNKKWDP--IVLMSCVSILLIEAYGQKSLHKKAE 139
L PT AT+ ++ N++ L + ++ D + + ++++ Y + A
Sbjct: 188 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 247
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ +++ + P Y +L+ A+C +G ++KA V + L P+ Y S +DG
Sbjct: 248 KVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGY 307
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+KGGN QKA+E+F R+K +P +Y +++ KA + A + NEM ++ PN
Sbjct: 308 VKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNE 367
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRL 306
+YTAL +AR G E+A +F++++ + D+ AY AL+ E ++
Sbjct: 368 RSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQ 427
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAG 332
I+ G + +R +Y M+D + R G
Sbjct: 428 IT--DAGLKHNRITYCTMLDGWARKG 451
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
I L V +I Y ++ AE + + +P Y +++AYC +G +E E
Sbjct: 83 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 142
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ +M + G + +Y + ++G + + +K + F R+K P+ TY ++ L+
Sbjct: 143 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 202
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
KA AL + EM H PN Y +++ +AR G A +++E + AG++PD+
Sbjct: 203 TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 262
Query: 295 YAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
YN L+ A+ RM P +Y ++D Y + G
Sbjct: 263 VIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGG 311
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + + A E+L E + ++ Y +G E AE F + +
Sbjct: 58 LIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAEN 117
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P +VYNS + + GN + + +M+ + Q + YT ++N + + L
Sbjct: 118 LVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCL 177
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
F+ +++ P TY +V F + G +A +I E++ G+ P+ Y +M+
Sbjct: 178 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGY 237
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A+++ M G +PD YNI+V A+ +AG
Sbjct: 238 ARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAG 276
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 6/176 (3%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L + +P E +Y L + Y +G +EKA +F+ M+K L V Y + + K G
Sbjct: 357 EMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSG 416
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q+A E+FQ++ + + TY M++ + + + A L N+M+ H + YT
Sbjct: 417 AMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYT 476
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA 319
+ + A R G EE E ++ +E + Y L+ + +PD+A
Sbjct: 477 SFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWL------AAADPDQA 526
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ Y + A T+ + S P Y L+ AY + +E A A EM
Sbjct: 22 LLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQ 81
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V+ S I G GN + A F++ K + P Y ++ Y +A
Sbjct: 82 GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETV 141
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M + N+ YT ++N FA E+ F +L+ G+ P Y +++
Sbjct: 142 EALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKL 201
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ M G P++ Y +++D Y R G
Sbjct: 202 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGG 241
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 46/244 (18%)
Query: 95 TWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE 154
W+D+++ ++ IV+ + +L+ A+ + KA + +R +PT
Sbjct: 249 VWEDMVSAGLK-------PDIVIYN----ILVHAFCKAGRMDKALGVLENIEANRLLPTI 297
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG------------ 202
+TY +L Y G ++KA VF ++ GL P V YNS + GL K
Sbjct: 298 ETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE 357
Query: 203 -----------------------GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+ +KA +FQRMK++ Y ++ K+
Sbjct: 358 MLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGA 417
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A ++F ++ K N TY +++ +AR+G +A ++ +Q G D Y +
Sbjct: 418 MQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTS 477
Query: 300 LMEA 303
++A
Sbjct: 478 FIKA 481
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y LLKA C SG +++A VF+++ GL + + Y + +DG + G KA ++ M
Sbjct: 404 AYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDM 463
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ T YT I ++ + + MR K + N TYT L++ +
Sbjct: 464 QKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADP 523
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
++A +EQ + +G++ D N L+
Sbjct: 524 DQAISCYEQAKASGLQLDSALSNCLL 549
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y LL+ Y G A A F MR + P+ +Y S I + + + AV
Sbjct: 15 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 74
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M Q + + +I+ Y A + A F + ++ P Y ++V A+ +
Sbjct: 75 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 134
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----GCEPDRAS 320
G E E + Q++ G + ++ Y ++ + + +S H G P A+
Sbjct: 135 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 194
Query: 321 YNIMVDAYGRAG 332
Y +V + +AG
Sbjct: 195 YGCIVKLFTKAG 206
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 59/128 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A + ++A + ++ D+ TY +L + G L KA + +M+K+G
Sbjct: 408 LLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHG 467
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ Y S+I + G+ ++ E M+ + + TYT +I+ + A+ A+
Sbjct: 468 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAI 527
Query: 245 KLFNEMRS 252
+ + ++
Sbjct: 528 SCYEQAKA 535
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 15/140 (10%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N K V FQ + + P Y L+++ Y + A F MR+ KPN+ YT
Sbjct: 1 NWHKIVNAFQVIDK----PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYT 56
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG---------- 313
+L++A+A E A E++ GI+ + + +++ Y
Sbjct: 57 SLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE 116
Query: 314 -CEPDRASYNIMVDAYGRAG 332
P YN +V AY +AG
Sbjct: 117 NLVPGGIVYNSIVQAYCQAG 136
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ L+N+ Q+R ++ + L+ A + L ++A + + +S +
Sbjct: 169 WEGLLNLFAQMRHEGIQPDLITYNT----LLSACSSRGLVEQAAMVFKTMNESGVVADAV 224
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ + S L + E + REM G P YNS I+ GN A +F++M
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+R C P ETY+ ++ +YG LF++M+ P + TY +L+ F G
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYF 344
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
+E+ +F + +G++PD Y+AL+
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALL 370
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIEAY A + ++ C P +TY+ LL+ Y G E+ ++F +M++
Sbjct: 264 LIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELS 323
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ YNS I +GG Q+++ +F M +P TY+ ++++ G+ + A
Sbjct: 324 TPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAA 383
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ M +++ P++ L++++ + + ++A + +++ AG++P V AY+AL++ Y
Sbjct: 384 KIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGY 443
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L + G + +S N +++AY + GLH+
Sbjct: 444 AKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHD 485
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PTE Y +++ GLLEK +F +M + + + + + I+ + G + ++
Sbjct: 78 CKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASL 137
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA-LKLFNEMRSHKCKPNICTYTALVNA 268
+ RMK++ +P+ TY ++N K + L LF +MR +P++ TY L++A
Sbjct: 138 HLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSA 197
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPD 317
+ GL E+A +F+ + +G+ D Y +L++ + L+ M G PD
Sbjct: 198 CSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPD 257
Query: 318 RASYNIMVDAYGRAG 332
A YN +++AY AG
Sbjct: 258 IAGYNSLIEAYADAG 272
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL A GL+E+A VF+ M + G+ AV Y S +D + E+
Sbjct: 186 PDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEEL 245
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ + P Y +I Y A A +F +M+ C P++ TY+ L+ +
Sbjct: 246 LREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGN 305
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRAS 320
+G E+ +F ++ P V YN+L++ + I+ H G +PD A+
Sbjct: 306 QGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDAT 365
Query: 321 YNIMVDAYGRAGL 333
Y+ ++ GR GL
Sbjct: 366 YSALLSVCGRGGL 378
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
LI AYG+ ++ + + R P TY +L A GL E +F +MR
Sbjct: 123 LINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHE 182
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN+ + G ++A +F+ M TY +++ + +++
Sbjct: 183 GIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRV 242
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM P+I Y +L+ A+A G A +F+Q+Q G PDV Y+ L+
Sbjct: 243 EELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRI 302
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y L S M + P A+YN ++ +G G
Sbjct: 303 YGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGG 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
T ++L+ + + +A +F+ M R+ P+ +Y I + + G +K EI
Sbjct: 45 TMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEI 104
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M + + + +T +IN YG+ + +L L M+ + +PN+ TY ++NA ++
Sbjct: 105 FEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSK 164
Query: 272 EGL-CEEAEEIFEQLQGAGIEPDVYAYNALMEAYR---LISRMHM--------GCEPDRA 319
GL E +F Q++ GI+PD+ YN L+ A L+ + M G D
Sbjct: 165 GGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAV 224
Query: 320 SYNIMVDAYG 329
+Y +VD +
Sbjct: 225 TYKSLVDTFA 234
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 206 QKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A+ +F+ M+R C+P+ YT+MI + G+ ++F +M + K N+ +TA
Sbjct: 63 HRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTA 122
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRM-HM 312
L+NA+ R G E + + +++ +EP++ YN ++ A L ++M H
Sbjct: 123 LINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHE 182
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G +PD +YN ++ A GL E
Sbjct: 183 GIQPDLITYNTLLSACSSRGLVE 205
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 10/224 (4%)
Query: 88 SLPPTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKA 138
S PPT AT++ LI V S+ L + + L+ G+ L ++A
Sbjct: 323 STPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREA 382
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ +L + P+ + A L+ +Y + + A + +R+ GL P Y++ I G
Sbjct: 383 AKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQG 442
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKP 257
KGG +A M + Q + ++ Y K AL+ F+E++ + +
Sbjct: 443 YAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEV 502
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ T+ L+ + GL EEA+E F ++ P Y L+
Sbjct: 503 DERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLL 546
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
KS H + + L+ R P TY L +C +A + R+M + G+ P+
Sbjct: 188 KSRHAGKAASLVRALERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTT 247
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKR-----DCCQPSTETYTLMINLYGKASKSFMALKL 246
YN + G + G Q A + F +MK+ + C+P +YT +++ G A + A K+
Sbjct: 248 YNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKV 307
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
F+EM C P+I TY AL+ ++G E+A +F+ + G P+V Y L+
Sbjct: 308 FDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCH 367
Query: 302 -----EAYRLISRMHM-GCEPDRASYNIMV 325
A +L+ +M GCEP+ +YN+++
Sbjct: 368 AGKIDRAMKLLDKMKREGCEPNVQTYNVLI 397
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P +Y +L ++G L+KA VF EM + G PS YN+ I K GN +
Sbjct: 278 DENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVE 337
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV +F M R P+ TYT++I A K A+KL ++M+ C+PN+ TY L+
Sbjct: 338 DAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLI 397
Query: 267 NAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEA 303
EG E+A +FE + +G P+ YN ++ A
Sbjct: 398 GYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISA 435
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+ C P+ TY L++ C G +E A AVF +M + G P+ V Y I
Sbjct: 303 KARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLI 362
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKC 255
GL G +A+++ +MKR+ C+P+ +TY ++I + AL LF M + +C
Sbjct: 363 RGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEEC 422
Query: 256 KPNICTYTALVNA-FAR---EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
PN TY +++A F R E + A + E + G P + +N ++ L
Sbjct: 423 LPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVD-RGYLPRRFMFNRVLNGLMLTGNQE 481
Query: 312 MGCE 315
+ E
Sbjct: 482 LSRE 485
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
LL A S KA ++ R + + PP AV YN+ DG + + +A++I ++M
Sbjct: 182 LLDALVKSRHAGKAASLVRALERR-FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESG 240
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMR-----SHKCKPNICTYTALVNAFAREGL 274
P+ TY +++ + ++ + A F +M+ CKP++ +YT +++ G
Sbjct: 241 IAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQ 300
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
++A ++F+++ GC P A+YN ++ + G
Sbjct: 301 LDKARKVFDEMS------------------------REGCTPSIATYNALIQVTCKKG 334
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +K + A + +++ IP TY +L++ C +G +++A + +M++ G
Sbjct: 326 LIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREG 385
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMIN---LYGKASKS 240
P+ YN I L + G+ +KA+ +F+ M K + C P+ +TY ++I+ + +A
Sbjct: 386 CEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDM 445
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+A ++ EM P + ++N G E + E+
Sbjct: 446 AVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRELL 487
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ +P TY ++ C + ++KA +F+EM+K G+ P Y ID K G
Sbjct: 442 EMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAG 501
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A F M+ C P+ TYT +++ Y K+ + + A +F+ M C PN TY+
Sbjct: 502 LIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYS 561
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG----------------IEPDVYAYNALM------ 301
AL++ + G ++A E++ +L G I P+V Y AL+
Sbjct: 562 ALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKA 621
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A+ L+ M GCEP++ Y+ +VD + + G
Sbjct: 622 QKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVG 657
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L + C P + Y L+ +C G ++ A+ VF M K G PS Y S ID + K G
Sbjct: 634 MLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+++ +M +D C P+ TYT M++ K ++ AL L + M C PN+ TYTA
Sbjct: 694 LDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTA 753
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L++ + G + E+F Q++ G P+ Y L+
Sbjct: 754 LIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE Y E+L + C+ + A + C G EKA + +EM + G P A Y I
Sbjct: 401 AEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVIT 460
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + KA +FQ MK+ P TYT++I+ + KA A F+EMRS C P
Sbjct: 461 FLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSP 520
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
N+ TYTAL++A+ + +A +IF ++ G P+ Y+AL++ + CE
Sbjct: 521 NVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 142 YLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y E D+ I P TY L+ C + + A + M G P+ +VY++ +DG
Sbjct: 595 YFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFC 654
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G A E+F RM + PS TYT +I+ K + +A+K+ ++M C PN+
Sbjct: 655 KVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVV 714
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
TYTA+V+ + G E+A + ++ G P+V Y AL++ L +M
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774
Query: 311 HM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
GC P+ +Y I+++ AGL + L E+ H+P
Sbjct: 775 KTKGCAPNYVTYRILINHCCAAGLLDDA-HLLLDEMKQTHWP 815
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 18/267 (6%)
Query: 87 DSLPPTHATWDDLINVSVQLR----LNKKWDPIVLMSC-----VSILLIEAYGQKSLHKK 137
D++ P T+ L+N + + + D ++ C V L++ + +
Sbjct: 602 DTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDS 661
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ +L + +P+ TY L+ G L+ A V +M K P+ V Y + +D
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVD 721
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K G +KA+ + M++ C P+ TYT +I+ GKA K L+LF +M++ C P
Sbjct: 722 GLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAP 781
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHMGCE 315
N TY L+N GL ++A + ++++ + Y ++ + R ++ + + E
Sbjct: 782 NYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEE 841
Query: 316 -------PDRASYNIMVDAYGRAGLHE 335
P Y +++D++ +AG E
Sbjct: 842 MESHDTAPIAPVYGMLIDSFSKAGRLE 868
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 91/237 (38%), Gaps = 73/237 (30%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C P TY ++ C +G EKA + M K G P+ V Y + IDGL K G
Sbjct: 703 QMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA-------------------------- 237
+E+F +MK C P+ TY ++IN A
Sbjct: 763 KVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYR 822
Query: 238 ------SKSFMA-LKLFNEMRSHKCKPNICTYTALVNAFAREG----------------- 273
SK F+A L L EM SH P Y L+++F++ G
Sbjct: 823 TTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSS 882
Query: 274 ----------------LC-----EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
LC EEA ++ +++ GI PD+ A+ L++ LI R
Sbjct: 883 SLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKG--LIER 937
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 39/323 (12%)
Query: 41 GSLRGKGWKYGSGFVDGIFPVLSPTAQQILRF-VQREV-------DSNTIWDAFDSLPPT 92
G L+ G++ + + + VL+ Q + F VQ+E+ D +T+ +F
Sbjct: 193 GRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTV-GSFAQALCK 251
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC-- 150
W D +++ R + K D ++ +S L+ + SL +A ++L + RC
Sbjct: 252 EGRWGDALDLLE--REDFKLDTVLCTQMISGLM-----EASLFNEA-MSFLHRM--RCNS 301
Query: 151 -IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
IP TY LL + L + + M G PS ++NS + + A
Sbjct: 302 YIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAY 361
Query: 210 EIFQRMKRDCCQPSTETYTLMI-NLYGKASKSF-----MALKLFNEMRSHKCKPNICTYT 263
++F RM C P Y + I ++ G+ +A K++ EM C N
Sbjct: 362 KLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTA 421
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
G E+A +I +++ G PD Y ++ +A+ L M +
Sbjct: 422 NFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKV 481
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G PD +Y I++D++ +AGL E
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIE 504
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
LHK+ +E+ S + ++D + L++A C+S +E+A A++ EMR+ G+ P +
Sbjct: 873 LHKE----MMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFV 928
Query: 194 SYIDGLLKGGNPQKAVEI 211
+ GL++ +A+++
Sbjct: 929 CLVKGLIERNKWNEALQL 946
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 140 FTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F L LL D P Y L+ C +G +E+A F +M + GL + + I+G
Sbjct: 182 FQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLING 241
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K G + ++F++MK + P+ TY ++N Y K A LF+EMR + N
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEAN 301
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ TY L+ RE EAE++ +Q++ A + P++ YN L+ +A L+
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAGLHEG 336
++ G P +YNI+++ Y +AG +G
Sbjct: 362 QLKSNGLSPSLVTYNILIEGYSKAGNWKG 390
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C + +AE + +M+K + P+ + YN+ I G GN KA + ++
Sbjct: 304 TYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQL 363
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K + PS TY ++I Y KA L EM P+ T T L++A+ R
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCEPDRASYN 322
E+A +I+ ++ G+ PDVY Y L+ +R + MH+ EP YN
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHV--EPSDVIYN 481
Query: 323 IMVDAY 328
M+ Y
Sbjct: 482 TMIHGY 487
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIE Y + K E+ P++ T +L+ AY +EKA ++ M K+
Sbjct: 377 ILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKF 436
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P VY I GL GN +++ ++F+ M +PS Y MI+ Y K S+ A
Sbjct: 437 GLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRA 496
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+L EM + PN+ +Y++++ ++G EEAE + +++ ++P N + +A
Sbjct: 497 LRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ +++K C +G L+K+ + ++ GL P+ V+Y + IDG K G+ ++A F +M
Sbjct: 164 SFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKM 223
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ T+T++IN K LF +M+ + PN+ TY L+N + EG
Sbjct: 224 GEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKI 283
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
A ++F++++ G+E +V YN L+ EA +L+ +M P+ +YN +
Sbjct: 284 CRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTL 343
Query: 325 VDAYGRAG 332
+ + G
Sbjct: 344 IGGFCDVG 351
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C G L+KA ++ +++ GL PS V YN I+G K GN + ++
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADL 394
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ PS T T++I+ Y + + A ++++ M P++ Y L++
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
+G +E+ ++F + +EP YN ++ Y RL+ M G P+ AS
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514
Query: 321 YNIMVDAYGRAG 332
Y+ ++ + G
Sbjct: 515 YSSIIGVLCKDG 526
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNP 205
D P + + +K +C SG LE A AV +EM+K + P+ + Y++ +DGL + G
Sbjct: 183 DHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRL 242
Query: 206 QKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+E+F+ M +D P TY ++IN + K A K+ M+S+ C PN+ Y+A
Sbjct: 243 KEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSA 302
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ F +EG EEA + FE+++ G++ D Y L+ EA L+ M
Sbjct: 303 LMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETK 362
Query: 314 CEPDRASYNIMVDAYGRAGLHE 335
C+ D + N+++ + G E
Sbjct: 363 CKADIVTVNVLLRGFCGEGRTE 384
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P TY+ L+ C SG L++A +F EM K + P A+ YN I+G G +A +
Sbjct: 224 PNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKK 283
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + MK + C P+ Y+ +++ + K + A+ F EM+ K + YT L+N F
Sbjct: 284 IMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFC 343
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRA 319
R G +EA + E+++ + D+ N L+ EA +++R+ G ++A
Sbjct: 344 RFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKA 403
Query: 320 SYNIMVDAYGRAG 332
SY I++++ + G
Sbjct: 404 SYRIVLNSLCQKG 416
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ +P TY +L+ + G +++A+ + M+ G P+ Y++ + G K G ++A
Sbjct: 257 QILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEA 316
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ F+ MK + T YT++IN + + + A+ L EM+ KCK +I T L+
Sbjct: 317 MDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRG 376
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS-RMHMGCEPD 317
F EG EEA + +L GI + +Y ++ +A L+ + G P
Sbjct: 377 FCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPH 436
Query: 318 RASYNIMVDAYGRAGLHEGKCS--YSLVELSVK 348
A+ N ++ +AG+ + Y L E+ K
Sbjct: 437 HATSNELLVGLCKAGMADDAVVALYGLAEMGFK 469
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y+ L+ +C G LE+A F EM+ +GL V Y I+ + G +A+
Sbjct: 293 CSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAM 352
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + MK C+ T +++ + ++ AL + N + S N +Y ++N+
Sbjct: 353 ALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSL 412
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------EAYRLISRMHMGCEPDR 318
++G ++A E+ G P N L+ L MG +P++
Sbjct: 413 CQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQ 472
Query: 319 ASYNIMVDAYGR 330
S+ ++V+ R
Sbjct: 473 DSWALLVEFVCR 484
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ ++ + + +A+ R+M ++ + + K ++ VE+F ++
Sbjct: 85 TYSTIIDKLARAKKFQAVDALLRQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKI 144
Query: 216 K---RDCCQPSTETYTLMINLYGKASKSFMALK--LFNEMRSHKCKPNICTYTALVNAFA 270
+ R+ +PS + + +NL + SK L+ L + + H KPN C + +
Sbjct: 145 QPIVRE--KPSLKAISTCLNLLVE-SKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHC 201
Query: 271 REGLCEEAEEIFEQLQGAGIE-PDVYAYNALMEAYRLISRMHMGCE------------PD 317
+ G E A + ++++ + I P++ Y+ LM+ R+ E PD
Sbjct: 202 KSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPD 261
Query: 318 RASYNIMVDAYG 329
+YN++++ +
Sbjct: 262 ALTYNVLINGFS 273
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y ++L + C G L+KA + G P N + GL K G AV +
Sbjct: 404 SYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGL 463
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+P +++ L++ + K +A +L +E+ +++C+
Sbjct: 464 AEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANECE 504
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 27/269 (10%)
Query: 91 PTHATWDDLINVSVQL-RLNKKWD---PIVLMSCVSIL-----LIEAYGQKSLHKKAEFT 141
PT AT++ L+N ++ RL + D IV C + LI+ G++ +A
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 351
Query: 142 YLEL------LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ E+ LD+ C Y L++ +G + +A +V++ M +G P V ++
Sbjct: 352 FKEMASRGLALDTVC------YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 405
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
IDGL K G AV IF+ M+ P+ Y+ +I+ KA K AL++ +M+ C
Sbjct: 406 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 465
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC- 314
P+ TY L++ + G E A F+++ AG +PDVY YN L+ C
Sbjct: 466 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACG 525
Query: 315 -----EPDRASYNIMVDAYGRAGLHEGKC 338
R Y+ +VD ++G EG C
Sbjct: 526 VLDDMSSSRFVYSSLVDGLCKSGKLEGGC 554
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 13/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK-Y 183
L++ + + H++A L + P +T+ +L+ YC++ E+A AV REM + +
Sbjct: 125 LLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDF 184
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS +N + GL K G A++ F+ ++R S T++++IN KA A
Sbjct: 185 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFSILINGLVKAGMMIQA 243
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L E ++ C +I TYTA+VN A+ +EA + E++ G P + YNAL+
Sbjct: 244 HSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNG 303
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
EA L+ ++ GC PD +Y ++D G+
Sbjct: 304 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 341
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT TY LL C G LE+A + R++ G P V Y S IDGL K +A
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 349
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F+ M T YT +I + K A ++ M SH C P++ T + +++
Sbjct: 350 KLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 409
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPDR 318
++ G A IF+ ++ G+ P+ Y+AL+ A ++++M C PD
Sbjct: 410 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469
Query: 319 ASYNIMVDAYGRAG 332
+YNI++D ++G
Sbjct: 470 ITYNILIDGLCKSG 483
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T+ L+L C SG + A F +R+ +P SA ++ I+GL+K G +A +
Sbjct: 188 PSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVKAGMMIQAHSL 246
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q + C TYT ++N K K A+ L ++ ++ C P I TY AL+N +
Sbjct: 247 AQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK 306
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EEA ++ ++ G PDV Y +L+ EAY+L M G D
Sbjct: 307 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVC 366
Query: 321 YNIMVDAYGRAGLHEGK 337
Y ++ R L GK
Sbjct: 367 YTALI----RGLLQTGK 379
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + + A + E+L++ C P TY +L+ C +G + A V +M
Sbjct: 474 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS- 532
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
S VY+S +DGL K G + +F M+R S +T T +I KA++ A
Sbjct: 533 ----SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANS-QTRTRLIFHLCKANRVDEA 587
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ LFN +R P+ Y ++++A + G E + +++++ +PD YNAL+
Sbjct: 588 VSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNG 645
Query: 304 YRLISRMHMGCEPDRASY 321
+RM DRA Y
Sbjct: 646 MIGANRM------DRAHY 657
>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 603
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI QK L KA F LE++ C P +Y + +C + M
Sbjct: 371 LINFLCQKGLLGKA-FNVLEMIXKHVCTPNSISYNPSIGGFC-----NEKSXYLEIMVSR 424
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN + L K AVEI +++ +P TY+++I+ K K+ +A
Sbjct: 425 GCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLA 484
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+L E + KPN+ T+T++V +R+G EA +IF L+G GI P+ +AYN ++
Sbjct: 485 LELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMG 544
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ GC+P A+YNI+V G
Sbjct: 545 LCKTQQTSRGCKPTEATYNILVKGITSEG 573
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P ++ +L+ YC SG +E+A R + + P+ + Y++ + L ++ +
Sbjct: 191 CLPKKNN--VLIGGYCXSGEVEEA---LRVLDCMSVSPNGINYDTILRSLCDRCKLKQGM 245
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ R + C P TYT +I+ K S+ A+KL EM S +CKPN+ TY AL+
Sbjct: 246 EVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGI 305
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDR 318
EG +E + L G +PDV +Y ++ +A +L++ M GC +
Sbjct: 306 CNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNV 365
Query: 319 ASYNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
++N +++ + GL GK +++++E+ KH
Sbjct: 366 VTFNTLINFLCQKGLL-GK-AFNVLEMIXKH 394
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 16/219 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + S +A +E++ C P TY L+K C G L++ + + YG
Sbjct: 266 LIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYG 325
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + Y + L GG A+++ M C + T+ +IN + A
Sbjct: 326 YQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAF 385
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ + H C PN +Y + F C E E + G PD+ YN L+
Sbjct: 386 NVLEMIXKHVCTPNSISYNPSIGGF-----CNEKSXYLEIMVSRGCYPDIVTYNILLAAL 440
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A ++ ++ G +PD +Y+I++D + G
Sbjct: 441 CKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVG 479
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 143 LELLDS----RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E+LD +C P TY L+ A C + +A + EM P+ V YN+ I G
Sbjct: 245 MEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKG 304
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ G + + + + QP +YT++++ + A+KL M C N
Sbjct: 305 ICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLN 364
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---------RLISR 309
+ T+ L+N ++GL +A + E + P+ +YN + + ++SR
Sbjct: 365 VVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNEKSXYLEIMVSR 424
Query: 310 MHMGCEPDRASYNIMVDA 327
GC PD +YNI++ A
Sbjct: 425 ---GCYPDIVTYNILLAA 439
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 142 YLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
YLE++ SR C P TY +LL A C ++ A + +++ GL P + Y+ IDGLL
Sbjct: 417 YLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLL 476
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN------------ 248
K G A+E+ + +P+ T+T ++ + K A+K+F+
Sbjct: 477 KVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAF 536
Query: 249 ------------EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ S CKP TY LV EG +EA +++ +L G
Sbjct: 537 AYNLIIMGLCKTQQTSRGCKPTEATYNILVKGITSEGXPKEASKLWSELYSKG 589
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A+ VF + K+GL PS V +N+ ++G +K G + + M
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ G+ PD+ YN L+ + LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGSCKEG 325
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C +++A +F EM + GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++++ P TY +I + K L +EM KP+ TYT L++ +
Sbjct: 264 YKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E A E +++ I D Y AL+ +A +++ M +G +PD +
Sbjct: 324 EGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGT 383
Query: 321 YNIMVDAYGRAG 332
Y I+++ + + G
Sbjct: 384 YTIVMNEFCKNG 395
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 19/247 (7%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-------RLNKKW-----DPIVL 117
+R Q D+ T W L P+ +++ L+N +++ RL P V
Sbjct: 152 IRLAQLVFDAITKW----GLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVY 207
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
V LI ++S +A + E+L+ +P T+ L+ +C +G L+ A ++
Sbjct: 208 TYSV---LINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIY 264
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
+++ GL P + YN+ I G K G+ ++ ++ M +P TYT +I+ K
Sbjct: 265 KQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A + +M + + YTAL++ +EG +AE++ ++ G++PD Y
Sbjct: 325 GDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTY 384
Query: 298 NALMEAY 304
+M +
Sbjct: 385 TIVMNEF 391
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ +C G L++ + EM GL P + Y + IDG K
Sbjct: 264 YKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E ++M + + YT +I+ K +S A K+ EM S KP+ T
Sbjct: 324 EGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F + G ++ +++Q G P V
Sbjct: 384 YTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSV 416
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ C G LE A ++M + + VVY + I GL K G A ++
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKM 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ M +P + TYT+++N + K KL EM+ P++ T
Sbjct: 369 LREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGCCKEG 325
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 307 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+I TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 367 KMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 152 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 207
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD+ Y +
Sbjct: 328 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMI 387
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 388 INEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 316
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY AL+ +A +++ M +G
Sbjct: 317 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 377 LKPDIGTYTMIINEFCKKG 395
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ ++ + G P S +N + K G+ + A +F + + +PS +Y ++N Y +
Sbjct: 124 YEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L + M + +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K ++ L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAHDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++A + KAE +++D P TY ++ Y SG +++ +FR+M G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V +NS++ L K G + A EIFQ M P +Y+++++ Y +
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF+ M N + L++A A+ G+ +EA +F ++QG G+ PDV Y+ L+ A+
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ R+ +G EP+ Y+ ++ + G
Sbjct: 485 CRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG 523
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI A+ ++ + +A + E+ P TY+ L+ A+C G L A F +M
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIF-QRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ VVY+S I G G+ KA E+ + M + +P+ ++ +I+ +
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +FN + +P I T+ +L++ + G E+A + + + GIEPDV YN L+
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVS 623
Query: 303 AY--------RLI---SRMHMGCEPDRASYNIMVDAYGRAG 332
Y LI +H +P +Y+I++D AG
Sbjct: 624 GYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ Y + + + D + + +L+ A+ G++++A VF EM+
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ 468
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V Y++ I + G A+E F +M +P+T Y +I+ + A
Sbjct: 469 GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528
Query: 244 LKLFNEMRSHKC-KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+L +EM S +PNI +++++++ EG +A ++F + G P + +N+L++
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID 588
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
Y L+ +M +G EPD +YN +V Y ++G
Sbjct: 589 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSG 629
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T+ L+ YC+ G +EKA V M G+ P V YN+ + G K G + +
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M +P+T TY+++++ A ++ A K+F+EM +I TY L+ R
Sbjct: 638 FREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 697
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F +L + D+ N ++ A + R G P+ ++
Sbjct: 698 NDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVST 757
Query: 321 YNIMVDAYGRAG-LHEGKCSYSLVELS 346
Y +M+ + G + E +S +E S
Sbjct: 758 YGVMIHNLLKEGSVEEADTMFSSMEKS 784
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P ++ ++ + G + KA + EM + G+ P V YNS +D L K KA
Sbjct: 259 RCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKA 318
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ ++M +P TYT +I+ Y + + K+F +M S P I T+ + +++
Sbjct: 319 ELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSS 378
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPD 317
+ G ++AEEIF+ + G PD+ +Y+ L+ Y R G +
Sbjct: 379 LCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVAN 438
Query: 318 RASYNIMVDAYGRAGLHE 335
+NI++ A+ + G+ +
Sbjct: 439 CHCFNILISAHAKRGMMD 456
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYT 228
E + + M G P+A+ YN+ I L Q+A+++ QRM ++ C P ++
Sbjct: 209 EAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 268
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ + K + A L NEM +P++ TY ++V+A + ++AE + Q+
Sbjct: 269 TVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDK 328
Query: 289 GIEPDVYAYNALMEAY 304
G+EPD Y A++ Y
Sbjct: 329 GVEPDGLTYTAIIHGY 344
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 148 SRCIPTEDT--YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
S+ IP + ++ ++ + C G + A VF + G P+ V +NS IDG G
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+KA + M +P TY +++ Y K+ K L LF EM K KP TY+ +
Sbjct: 597 EKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIV 656
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGC 314
++ G A+++F ++ +G D+ Y L+ EA L ++ M C
Sbjct: 657 LDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 716
Query: 315 EPDRASYNIMVDA 327
+ D N +++A
Sbjct: 717 KFDITILNTVINA 729
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y +KA F L+ + S I P TY L+ YC SG ++ +FREM
Sbjct: 586 LIDGYCLVGKMEKA-FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHK 644
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ V Y+ +DGL G A ++F M +TY +++ + + A
Sbjct: 645 KVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 704
Query: 244 LKLFNEMRSHKCK-----------------------------------PNICTYTALVNA 268
+ LF+++ + CK PN+ TY +++
Sbjct: 705 ITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHN 764
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+EG EEA+ +F ++ +G P N ++
Sbjct: 765 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L+KK P + + + + G+ S KK + E++DS DTY +LLK C +
Sbjct: 642 LHKKVKPTTVTYSIVLDGLFHAGRTSAAKK---MFHEMIDSGTAVDIDTYKILLKGLCRN 698
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
L ++A +F ++ + N+ I+ L K ++A ++F + P+ TY
Sbjct: 699 DLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTY 758
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+MI+ K A +F+ M C P+ ++ ++G +A ++ G
Sbjct: 759 GVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDG 818
Query: 288 AGIEPDVYAYNALMEAY 304
I + + LM +
Sbjct: 819 TIISLEASTTSLLMSLF 835
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 97 DDLINVSVQL-----RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
+DL + ++ L ++ K+D +L + +I A + ++A + + S +
Sbjct: 698 NDLTDEAITLFHKLGAMDCKFDITILNT-----VINALYKVRRREEANDLFAAISTSGLV 752
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ G +E+A+ +F M K G PS+ + N I LL+ G+ KA
Sbjct: 753 PNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYY 812
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
++ T +L+++L+ K
Sbjct: 813 MSKVDGTIISLEASTTSLLMSLFSSKGK 840
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 91 PTHATWDDLINVSVQLR---LNKKWDPI--VLMSCVSI----------LLIEAYGQKSLH 135
P+ D+++ + L+ + K+WD + +++ V + LI + L
Sbjct: 205 PSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLF 264
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++ ++ + C P YA ++ C G E A + M YGL P+ V YN+
Sbjct: 265 EQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTV 324
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ GL ++A ++ M ++ C T+ ++++ + + ++L +M H C
Sbjct: 325 LKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 384
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++ +A
Sbjct: 385 IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQE 444
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
LIS M GC P+ ++N +++ + GL E
Sbjct: 445 LISHMIQQGCLPNPVTFNTLINFMCKKGLVE 475
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + A+ + M + G
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V +N+ I+ + K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ +A +REG ++ ++F+ +Q A + D YNA++
Sbjct: 514 ELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSL 573
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y I++ GL
Sbjct: 574 CKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGL 613
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E+ C + T+ +L+ +C +GL+++ + +M ++G P + Y +
Sbjct: 335 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 394
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ +A + A +L + M C
Sbjct: 395 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC 454
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 455 LPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 514
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ M A R G
Sbjct: 515 LLNVMINKGITPNTIIYSSMASALSREG 542
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 35/176 (19%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C+P T+ L+ C GL+E+A + ++M G P + Y++ IDGL K G
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE--------------- 249
++A+E+ M P+T Y+ M + + ++ +++F+
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568
Query: 250 --------------------MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
M S+ C PN TYT L+ A EGL EA+++ +L
Sbjct: 569 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++++ C GL+ A V EM G + + + ++ +GG + AV
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q + C + L+++ + ++L ++ S C+P+I +Y A++
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
++ EE+ ++ G P+V +N L+ + + +S+M GC PD
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285
Query: 321 YNIMVDAYGRAGLHE 335
Y ++D + G HE
Sbjct: 286 YATIIDGICKDGHHE 300
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 12/198 (6%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
T L+ + R C T ++L+A C G A + + G + N +
Sbjct: 128 LTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSA 187
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
+ + G + VE+ +++ C+P +Y ++ A + +L EM C PN
Sbjct: 188 ICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPN 247
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS 308
+ T+ L+ R GL E+ E Q+ G PD+ Y +++ A ++S
Sbjct: 248 VATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS 307
Query: 309 RM-HMGCEPDRASYNIMV 325
RM G +P+ YN ++
Sbjct: 308 RMPSYGLKPNVVCYNTVL 325
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ G+ ++A +++ P Y+ + A G +K +F ++
Sbjct: 499 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 558
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-- 242
+ A +YN+ I L K +A++ F M + C P+ TYT++I G AS+ +
Sbjct: 559 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIR--GLASEGLVRE 616
Query: 243 ALKLFNEMRSHK 254
A L +E+ S +
Sbjct: 617 AQDLLSELCSRR 628
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 16/197 (8%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
E Y L+ YC + A +F+ M G P+++ +N +DGL K G + A+ +
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV 563
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M + +P+ TYT++I + S A ++M S C+PN+ TYTA + A+ R+
Sbjct: 564 DVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQ 623
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASY 321
G EAEE+ +++ GI D + Y+ L+ AY LI GCEP R +Y
Sbjct: 624 GRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTY 683
Query: 322 NIMV-----DAYGRAGL 333
+I++ + Y + G+
Sbjct: 684 SILLKHLIFEKYNKEGM 700
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L+ P ++ ++ A+C G + A+A F + K+G + Y S I G K
Sbjct: 180 DMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIH 239
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A ++F+ M ++ C + +YT +I+ + + K AL+LF +M+ C P++ TYT
Sbjct: 240 ELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYT 299
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------- 315
LV AF G EA + FE++ GIEP+VY Y L++ + + +M G E
Sbjct: 300 VLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK 359
Query: 316 ---PDRASYNIMVDAYGRAGLHE 335
+N ++D Y + G+ E
Sbjct: 360 GLVSSVVPFNALIDGYCKRGMME 382
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + T+ + C G +E+A VF +++ + +Y + IDG K A
Sbjct: 467 VPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHL 526
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F+RM + C P++ T+ ++++ K K A+ L + M KP + TYT L+
Sbjct: 527 LFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEIL 586
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRA 319
RE + A +Q+ +G +P+V Y A ++AY RL+ M G D
Sbjct: 587 RESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSF 646
Query: 320 SYNIMVDAYGRAG 332
Y+++V+AYG G
Sbjct: 647 IYDVLVNAYGCIG 659
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + +K +A ++ +++ P TY L+ C + +++ A + M K G
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + ++ID L K G ++A ++F+ +K + + YT +I+ Y KA K A
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAH 525
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
LF M C PN T+ L++ +EG E+A + + + +P V+ Y L+E
Sbjct: 526 LLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEI 585
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A + +M GC+P+ +Y + AY R G
Sbjct: 586 LRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 46/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+ + +A + E++++ P TY +L+ +C G +++ + M +
Sbjct: 300 VLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK 359
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL S V +N+ IDG K G + A+ + MK + P++ TY +I + + A
Sbjct: 360 GLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRA 419
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFARE------------------------------- 272
+ L N+M +K PN+ TY L++ +
Sbjct: 420 MALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479
Query: 273 ----GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPD 317
G E+A ++FE L+ E + + Y AL++ Y L RM GC P+
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539
Query: 318 RASYNIMVDAYGRAG 332
++N+++D + G
Sbjct: 540 SITFNVLLDGLRKEG 554
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LIE ++S +A +++ S C P TY +KAYC G L +AE + ++++
Sbjct: 580 ILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEE 639
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN--LYGKASKSF 241
G+ + +Y+ ++ G A + RM C+PS +TY++++ ++ K +K
Sbjct: 640 GILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG 699
Query: 242 MALK------------------------LFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
M L LF +M C PN+ TY+ L+ +
Sbjct: 700 MGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSL 759
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
A +F ++ +GI P +N+L+ EA RL+ M
Sbjct: 760 AFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSM 802
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+ E +Y L+ +C G +++A +F +M++ G P Y + + G +A+
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ F+ M + +P+ TYT++I+ + K K +++ + M ++ + AL++ +
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDR 318
+ G+ E+A + + ++ + P+ YN L+ A L+++M+ P+
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435
Query: 319 ASYNIMVDAYGRA 331
+YN ++ +A
Sbjct: 436 VTYNTLIHGLCKA 448
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 26/219 (11%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK-----AYC 165
K + I+L S + +L+ AYG A + + D+ C P+ TY++LLK Y
Sbjct: 637 KEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYN 696
Query: 166 MSGL---------------------LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
G+ E +F +M + G P+ Y+ I GL K +
Sbjct: 697 KEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A +F MK PS + +++ K AL+L + M + ++ +Y
Sbjct: 757 LSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKL 816
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LV +G E+AEEIF L G D + L++
Sbjct: 817 LVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDG 855
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 114/317 (35%), Gaps = 71/317 (22%)
Query: 86 FDSLPPTHATWDDLINVSVQLRLNKKW--DP---IVLMSCVSILLIEAYGQKSLHKKAEF 140
F SL P ++ DL + + L +W +P ++ S L + +LH
Sbjct: 29 FSSLSP-NSLQQDLPSQIFTILLQPQWRKNPSFNTLIPSLTPTHLSSLFNNPNLHPLTAL 87
Query: 141 TYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK---------------- 182
+ + + + I T +Y LL +G L AE V M K
Sbjct: 88 NFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLT 147
Query: 183 -YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL-------- 233
+ S YN L + G + +F+ M D +P+ ++ M+N
Sbjct: 148 HHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVV 207
Query: 234 -----------YGKASKSFM----------------ALKLFNEMRSHKCKPNICTYTALV 266
+G SF A K+F M C N +YT L+
Sbjct: 208 VAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLI 267
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ F G +EA E+F Q++ G PDV Y L+ EA + M G E
Sbjct: 268 HGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIE 327
Query: 316 PDRASYNIMVDAYGRAG 332
P+ +Y +++D + + G
Sbjct: 328 PNVYTYTVLIDYFCKVG 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 68/146 (46%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ C+P +TY+ L+K C L A +F M++ G+ PS ++NS + K G
Sbjct: 731 KMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLG 790
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A+ + M E+Y L++ + A ++F + S + +
Sbjct: 791 MHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWK 850
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAG 289
L++ R+G +E ++ + ++ G
Sbjct: 851 VLLDGLVRKGYVDECSQLRDIMEKTG 876
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRC----IPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
L+ + + +H++A L LLDS + ++Y LL+ G EKAE +FR +
Sbjct: 782 LLSSCCKLGMHEEA----LRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSL 837
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
G VV+ +DGL++ G + ++ M++ C+ ++T+T++
Sbjct: 838 LSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 113/221 (51%), Gaps = 29/221 (13%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVE 210
P + +L+K +C +G ++ A V EM++ G+ P+++ Y++ +D L ++AVE
Sbjct: 195 PNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVE 254
Query: 211 IFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+ M + P + +MIN + ++ + A + + M+ + C PN+ Y+AL+N F
Sbjct: 255 LFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGF 314
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDR 318
+EG +EA+++F++++ G++ D Y LM EA +L+ M C D
Sbjct: 315 CKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADA 374
Query: 319 ASYNI----------------MVDAYGRAGLHEGKCSYSLV 343
+YN+ M+D +G G+H K SY ++
Sbjct: 375 LTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRII 415
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ +S K+A + +++ R I P + +++ +C SG +E+A+ + M+K
Sbjct: 239 LMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKN 298
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ Y++ ++G K G Q+A ++F +K+ + T YT ++N + + A
Sbjct: 299 GCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEA 358
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+KL EM++ +C+ + TY ++ + EG EEA ++ +Q G+ + +Y ++
Sbjct: 359 MKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNA 418
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A + +S M G P A++N +V +G
Sbjct: 419 LCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESG 458
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 125 LIEAYGQKSLHKKA-EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-K 182
L+ + + LH K E L + +R P+ + + L SG ++ A + +
Sbjct: 131 LMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHN 190
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ-PSTETYTLMINLYGKASKSF 241
L P+ ++N + K G+ A + + MKR P++ TY+ +++ S+S
Sbjct: 191 LALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSK 250
Query: 242 MALKLFNEMRSHK-CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A++LF +M S + P+ + ++N F R G E A+ I + ++ G P+VY Y+AL
Sbjct: 251 EAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSAL 310
Query: 301 MEAY 304
M +
Sbjct: 311 MNGF 314
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVN 267
+++ R+K PS + +NL + + +A KL + + +PN C + LV
Sbjct: 151 IQVIARVK-----PSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVK 205
Query: 268 AFAREGLCEEAEEIFEQLQGAGIE-PDVYAYNALM----------EAYRLISRM--HMGC 314
+ G + A + E+++ +GI P+ Y+ LM EA L M G
Sbjct: 206 HHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGI 265
Query: 315 EPDRASYNIMVDAYGRAG 332
PD +N+M++ + R+G
Sbjct: 266 SPDPVIFNVMINGFCRSG 283
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 63/147 (42%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ C +G +++A + EM+ A+ YN + GL G ++A+++ +
Sbjct: 342 YTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWG 401
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ + +Y +++N + A+K + M P+ T+ LV G E
Sbjct: 402 CEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTE 461
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G G+ P ++ A++E+
Sbjct: 462 IGVRVLIGFLGIGLIPAPKSWGAVVES 488
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY LL+ A M G +A + EM GL P YN I+G K GN +KA+EIF
Sbjct: 251 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 310
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ M R + + TYT +I K + KLF+E +P++ Y AL+N+ +
Sbjct: 311 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 370
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G + A EI +++ I PD YN LM EA +LI M G +PD +Y
Sbjct: 371 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 430
Query: 322 NIMVDAYGRAG 332
N ++ Y G
Sbjct: 431 NTLISGYSMKG 441
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ +C G ++KA +F M + G+ + V Y + I L K G Q+ ++
Sbjct: 285 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 344
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F R +P Y +IN + + A ++ EM + P+ TY L+
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 404
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS-----------RMHMGCEPDRAS 320
G +EA ++ +++ GI+PD+ YN L+ Y + M+ G P +
Sbjct: 405 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 464
Query: 321 YNIMVDAYGRAG 332
YN ++ + G
Sbjct: 465 YNALIQGLCKNG 476
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ YC G L+ A M + G+ + YN + L G +A E+
Sbjct: 215 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 274
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P TY ++IN + K AL++F M + + TYTAL+ A ++
Sbjct: 275 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 334
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G +E +++F++ GI PD+ YNAL+ ++ + E PD +
Sbjct: 335 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394
Query: 321 YNIMV 325
YN ++
Sbjct: 395 YNTLM 399
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY ++ +C G +++A VF EM G + P AV+YN+ I G G A+
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 238
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
RM + TY L+++ + A +L EM P++ TY L+N
Sbjct: 239 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRA 319
+EG ++A EIFE + G+ V Y AL+ E +L + G PD
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358
Query: 320 SYNIMVDAYGRAG 332
YN +++++ +G
Sbjct: 359 LYNALINSHSTSG 371
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLK 201
LELL P TY ++ +C G ++ A + REMR + G+ P+ Y + I G K
Sbjct: 134 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 193
Query: 202 GGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G +AV++F M + +P Y +I Y K AL + M +
Sbjct: 194 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 253
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY LV+A +G EA E+ E++ G G+ PDV+ YN L+ +
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 297
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A +K ++ + + E + P Y L+ ++ SG +++A + EM K
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + GL G +A ++ M QP TY +I+ Y AL
Sbjct: 388 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 447
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ NEM + P + TY AL+ + G ++AE + +++ GI PD Y +L+E
Sbjct: 448 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A A+F +M + LP +N + L G P +A+E+ ++M R P+ TY +I
Sbjct: 98 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153
Query: 233 LYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-I 290
+ + AL + EMR PN TY +++ + + G +EA ++F+++ G +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213
Query: 291 EPDVYAYNALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
+P+ YNAL+ Y R++ R G A+YN++V A G G
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVER---GVAMTVATYNLLVHALFMDG--RG 268
Query: 337 KCSYSLVE 344
+Y LVE
Sbjct: 269 TEAYELVE 276
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ R P + TY L++ C+ G +++A + EM + G+ P V YN+ I G G
Sbjct: 382 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 441
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + A+ I M P+ TY +I K + A + EM + P+ TY
Sbjct: 442 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 501
Query: 264 ALVNAFAREGLCEEAEEIFEQ 284
+L+ EGL E E +
Sbjct: 502 SLI-----EGLTTEDERAIDD 517
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y K K A E+++ PT TY L++ C +G + AE + +EM + G
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492
Query: 185 LPPSAVVYNSYIDGL 199
+ P Y S I+GL
Sbjct: 493 ITPDDSTYISLIEGL 507
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++++R P TY++L+ C G L+ A +F EM GL P+ V + + I+G G
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+EI+Q+M R +P TY +IN K A KL EM KP+ TYT
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMG 313
L++ +EG E A EI +++ GIE D A+ AL +EA R + M G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD A+Y +++ + + G
Sbjct: 466 IKPDDATYTMVIHGFCKKG 484
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 30/295 (10%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL----------------RLN 109
AQ +L+FV N+ F S+ T + SV + RL
Sbjct: 122 AQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLV 181
Query: 110 KKWD-PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
+K + I SC L + + +L A Y E+LD P + +L+ C
Sbjct: 182 RKHNLQIPFHSCG--YLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEH 239
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+ +A+ +F E+ K GL P+ V +N+ I+G K GN + + + M + P TY+
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++IN K + A KLF EM PN T+T L+N G + EI++Q+
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359
Query: 289 GIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++PDV YN L+ EA +L+ M G +PD+ +Y +++D + G
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 109/220 (49%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++ A +LE+ D +P + T+ L+ +C++G + ++++M +
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN+ I+GL K G+ ++A ++ M + +P TYT++I+ K A
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L++ EM + + +TAL++ F REG EAE ++ AGI+PD Y ++
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG 479
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
++L+ M G P +YN++++ + G
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ +E+ P + TY +L+ C G LE A + +EM K G+ V + +
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G + G +A + M +P TYT++I+ + K KL EM+
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
P + TY L+N ++G + A + + + G+ PD YN L+E
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ +AE T E+L++ P + TY +++ +C G ++ + +EM+ G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
P V YN ++GL K G + A + M P TY +++
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
KS H + + L+ R P TY L +C +A V R M + G+ P+
Sbjct: 177 KSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTT 236
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKR-----DCCQPSTETYTLMINLYGKASKSFMALKL 246
YN + G + G + A + F +MK+ + C+P +YT M++ G A + A K+
Sbjct: 237 YNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKV 296
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
F+EM C P++ TY AL+ ++G E+A +F+ ++ G P+V Y L+
Sbjct: 297 FDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCH 356
Query: 302 -----EAYRLISRM-HMGCEPDRASYNIMV 325
+L+ RM + GCEP +YN+++
Sbjct: 357 AGKIDRGLKLLERMKNGGCEPIVQTYNVLI 386
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P +Y ++ ++G LEKA VF EM K G PS YN+ I + K GN +
Sbjct: 267 DESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVE 326
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV +F M+ P+ TYT++I A K LKL M++ C+P + TY L+
Sbjct: 327 DAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLI 386
Query: 267 NAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEA 303
EG E+ ++FE++ +G P+ YN ++ A
Sbjct: 387 RYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISA 424
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ G +KA + E+ C P+ TY L++ C G +E A VF MR G
Sbjct: 280 MVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKG 339
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I GL G + +++ +RMK C+P +TY ++I + + L
Sbjct: 340 YVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGL 399
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEE---AEEIFEQLQGAGIEPDVYAYNAL 300
LF +M + +C PN TY +++A E+ A + E++ G P + +N +
Sbjct: 400 DLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRV 459
Query: 301 MEAYRL 306
+ L
Sbjct: 460 LNGLML 465
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 30/178 (16%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
LL A S KA ++ R + + P V YN+ DG + + +A+++ + M
Sbjct: 171 LLDALSKSRHAGKAASLVRALEQR-FTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESG 229
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMR-----SHKCKPNICTYTALVNAFAREGL 274
P+ TY +++ + +A + A F +M+ CKP++ +YT +V+ G
Sbjct: 230 IAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQ 289
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
E+A ++F+++ G C P A+YN ++ + G
Sbjct: 290 LEKARKVFDEMAKEG------------------------CAPSVATYNALIQVICKKG 323
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A Q +A T+ ++ + +PT ++ ++ C + L A VF EM
Sbjct: 123 LMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 182
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y+ IDGL K +A ++ RM + C+P YT ++ + A + AL
Sbjct: 183 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSAL 242
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M S C P++ TYT +++ + G ++A EIF +L P+V Y+AL+ Y
Sbjct: 243 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 302
Query: 305 RLISRM--------HMGCEPDRASYNIMV 325
SR+ M C P+ +YN M+
Sbjct: 303 CRASRVDEGGKVMREMACRPNVVTYNTMI 331
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ C L+ A AV E RK P V YN+ + L + G +A+
Sbjct: 78 CRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEAL 137
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F +M + P+ ++ +I +A + AL++FNEM PN+ TY+ +++
Sbjct: 138 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 197
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ +EA+++ +++ G PD+ AY L+ A L+ RM GC PD
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 257
Query: 319 ASYNIMVDAYGRAG----LHE-------GKCSYSLVELS 346
+Y +++D + G HE KCS ++V S
Sbjct: 258 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYS 296
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ + +G L+ A + R M G P V Y ID L K G A
Sbjct: 218 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 277
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EIF+ + + C P+ TY+ +I Y +AS+ K+ EM C+PN+ TY ++
Sbjct: 278 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGL 334
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+ EEA +F ++ G PD Y L A R+I
Sbjct: 335 SMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMID 373
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFN-EMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
Q + T ++++ + + AL+ F+ + +P++ +YT L+N + G + A
Sbjct: 7 QCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAF 66
Query: 280 EIFEQLQGA-GIEPDVYAYNALMEAY----RLISRMHMGCE-------PDRASYNIMVDA 327
++F ++ A G P+ + YNAL++ RL + + E PD +YN ++ A
Sbjct: 67 DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAA 126
Query: 328 YGRAG 332
+ G
Sbjct: 127 LFQLG 131
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++++R P TY++L+ C G L+ A +F EM GL P+ V + + I+G G
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+EI+Q+M R +P TY +IN K A KL EM KP+ TYT
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMG 313
L++ +EG E A EI +++ GIE D A+ AL +EA R + M G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD A+Y +++ + + G
Sbjct: 466 IKPDDATYTMVIHGFCKKG 484
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 30/295 (10%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL----------------RLN 109
AQ +L+FV N+ F S+ T + SV + RL
Sbjct: 122 AQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLV 181
Query: 110 KKWD-PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG 168
+K + I SC L + + +L A Y E+LD P + +L+ C
Sbjct: 182 RKHNLQIPFHSCG--YLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEH 239
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
+ +A+ +F E+ K GL P+ V +N+ I+G K GN + + + M + P TY+
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++IN K + A KLF EM PN T+T L+N G + EI++Q+
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359
Query: 289 GIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G++PDV YN L+ EA +L+ M G +PD+ +Y +++D + G
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 109/220 (49%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++ A +LE+ D +P + T+ L+ +C++G + ++++M +
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN+ I+GL K G+ ++A ++ M + +P TYT++I+ K A
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
L++ EM + + +TAL++ F REG EAE ++ AGI+PD Y ++
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG 479
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
++L+ M G P +YN++++ + G
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ +E+ P + TY +L+ C G LE A + +EM K G+ V + +
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G + G +A + M +P TYT++I+ + K KL EM+
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P + TY L+N ++G + A + + + G+ PD YN L+E +
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGH 550
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ L+ +C G + +AE REM + G+ P Y I G K G+ + ++ + M+
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D P TY +++N K + A L + M + P+ TY L+ + G
Sbjct: 498 CDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG--- 554
Query: 277 EAEEIFEQLQG-AGIEPDVYAYNALMEAYR 305
E F++LQ G+ D +Y +L+ R
Sbjct: 555 -NREDFDKLQSEKGLVQDYGSYTSLIGDLR 583
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ +AE T E+L++ P + TY +++ +C G ++ + +EM+ G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN ++GL K G + A + M P TY +++ + K
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNR---- 556
Query: 245 KLFNEMRSHK-CKPNICTYTALVNAFAREGLCEEAEE 280
+ F++++S K + +YT+L+ + C+E ++
Sbjct: 557 EDFDKLQSEKGLVQDYGSYTSLIGDLRKT--CKERQK 591
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C G +EKA+ +F EM K+GL + Y I GL K G ++ E+
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M+ P+ TY ++N K ++ A K+F+EMR NI TY L+ R
Sbjct: 256 YEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
E EA ++ +Q++ I P++ YN L++ + + ++ G P +
Sbjct: 316 EMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 321 YNIMVDAYGRAGLHEG 336
YN++V + R G G
Sbjct: 376 YNVLVSGFCRKGDTSG 391
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 101/188 (53%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ +++K C +G +EK+ + E+R++G P+ V+Y + IDG K G +KA ++F M
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TYT++I+ K +++ +M+ H PN+ TY ++N ++G
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRT 284
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
++A ++F++++ G+ ++ YN L+ EA +++ +M P+ +YN +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 345 IDGFCSVG 352
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C +A V +M+ Y + P+ + YN+ IDG G KA+ + + +
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDL 364
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K PS TY ++++ + + + A K+ EM KP+ TYT L++ FAR
Sbjct: 365 KSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E A ++ ++ G+ PDV+ Y+ L+ EA RL M EP+ YN M
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484
Query: 325 VDAYGRAG 332
+ Y + G
Sbjct: 485 ILGYCKEG 492
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 81/153 (52%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C G L KA ++ R+++ GL PS V YN + G + G+ A ++
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ +PS TYT++I+ + ++ A++L + M P++ TY+ L++ F
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+G EA +F+ + +EP+ YN ++ Y
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGY 488
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ +K +KA+ + E+ + E TY +L+ +G+ ++ ++ +M+++G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN ++ L K G + A ++F M+ + TY +I + K+ A
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ ++M+S+ PN+ TY L++ F G +A + L+ G+ P + YN L+ +
Sbjct: 324 KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF 383
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
+++ M G +P + +Y I++D + R+
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + K+ Y ++ + P TY ++ C G + A VF EMR+
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRER 297
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V YN+ I GL + +A ++ +MK P+ TY +I+ + K A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKA 357
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L L +++S P++ TY LV+ F R+G A ++ ++++ GI+P Y L++
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ +L S M +G PD +Y++++ + G
Sbjct: 418 FARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKG 457
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P++ TY +L+ + S +E A + M + GL P Y+ I G G +A +
Sbjct: 406 PSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M +P+ Y MI Y K S+ AL+LF +M + PN+ +Y+ L+ +
Sbjct: 466 FKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCK 525
Query: 272 EGLCEEAEEIFEQLQGAGIEP 292
E +EAE++ E++ +GI+P
Sbjct: 526 ERKLKEAEDLVEKMIDSGIDP 546
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 45/219 (20%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS---------------------- 194
Y +++ AY S L+ + F EM G P + +N+
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 195 ------------YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
I G + G +K+ ++ ++ P+ YT +I+ K +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A LF EM N TYT L++ + G+ ++ E++E++Q G+ P++Y YN +M
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+A+++ M G + +YN ++ R
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + C P TY L+ C G + +A+ + EM + GL PS V Y S I GL +
Sbjct: 179 FREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQ 238
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
N +A+E+ + M + +P+ TY+ +++ K+ S A++L M + PN+ T
Sbjct: 239 SNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVT 298
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
Y+ L+N +EG EA EI ++++ G++PD Y ++ EA I M
Sbjct: 299 YSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMA 358
Query: 312 M-GCEPDRASYNIMVDAY 328
+ G P+RAS+ V +
Sbjct: 359 LGGISPNRASWTFHVKMH 376
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 12/226 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
V + + YG+ A + ++ D + PT+ +Y + +++A ++EM
Sbjct: 87 VFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEM 146
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNP-QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
R+ G+PP+ V N I L K + A +F+ M CQP + TY +IN K K
Sbjct: 147 REKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGK 206
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +L +EM P++ +YT+L++ + +EA E+ E++ GIEP+V+ Y++
Sbjct: 207 ISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSS 266
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLH 334
LM +A L+ M P+ +Y+ +++ + G H
Sbjct: 267 LMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKH 312
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSG-LLEKAEAVFREMRKYGLPPSAVVYNS 194
K+A Y E+ + PT + +L+KA C + +E A +FREM G P + Y +
Sbjct: 137 KRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGT 196
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I+GL K G +A E+ M+ PS +YT +I+ +++ A++L EM +
Sbjct: 197 LINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIING 256
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
+PN+ TY++L++ + G +A E+ E + + P++ Y+ L+ EA
Sbjct: 257 IEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAV 316
Query: 305 RLISRMHM-GCEPDRASYNIMVDA 327
++ RM + G +PD Y ++
Sbjct: 317 EILDRMRLQGLKPDAGMYGRIISG 340
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +Y L+ C S L++A + EM G+ P+ Y+S +DGL K G+ +A+E+
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMEL 283
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M R P+ TY+ +IN K K A+++ + MR KP+ Y +++
Sbjct: 284 LEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCA 343
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-MHMGCEPDRA 319
+EA +++ GI P+ ++ ++ + ++ + + +P RA
Sbjct: 344 ACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRA 392
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+ + I L+ + A + +RMK++ C+ + + + + YG+ + A+++F++M
Sbjct: 52 TFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKM 111
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-------- 302
+ KP +Y + + E + A +++++ GI P V + N L++
Sbjct: 112 EDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEET 171
Query: 303 ---AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A+RL M + GC+PD +Y +++ + G
Sbjct: 172 VESAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ C +G +E A VF EM + GL P V YN+ + G K G +++ +
Sbjct: 79 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 138
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + P T+T +I+ KA A+ L +MR + N T+TAL++ F +
Sbjct: 139 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 198
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G ++A E+++ GI+P V YNAL+ Y + RM + E PD +
Sbjct: 199 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 258
Query: 321 YNIMVDAYGRAG 332
Y+ ++ Y + G
Sbjct: 259 YSTIISGYCKVG 270
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + ++ + E+ +P T+ L+ A C +G LE+A A+ +MR+ G
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + V + + IDG K G A+ + M++ QPS Y +IN Y K + +A
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L EM + + KP++ TY+ +++ + + G + A ++ +++ G+ PD Y++L+
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A L M +G +PD +Y ++D + + G
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E++ P +Y LL YC G L ++ AVF EM + GL P V + S I
Sbjct: 100 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 159
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKC 255
K GN ++AV + +M+ + + T+T +I+ G K F+ AL EMR
Sbjct: 160 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID--GFCKKGFLDDALLAVEEMRKCGI 217
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+P++ Y AL+N + + G + A E+ +++ ++PDV Y+ ++ Y
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 12/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L++A C G LE+A V +MR G P+AV YN+ + + G A +
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 212 FQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
M+ + +P+ T+ M+N KA + A K+F+EM P++ +Y L++ +
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ G E+ +F ++ G+ PDV + +L+ +A L+++M G +
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 320 SYNIMVDAYGRAGL 333
++ ++D + + G
Sbjct: 188 TFTALIDGFCKKGF 201
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 17/245 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A E+ P+ Y L+ YC G ++ A + REM
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y++ I G K GN A ++ Q+M + P TY+ +I + + A
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF M +P+ TYT L++ +EG E+A + +++ G+ PDV Y+ L+
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA------GLHEGKCSYSLVELSV 347
EA+RL+ ++ H PD Y+ ++ +A L +G C L++ +
Sbjct: 372 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 431
Query: 348 KHYPA 352
K Y +
Sbjct: 432 KVYQS 436
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M ++G+ P+ YN + L G ++AV + M+ C P+ TY ++ + +A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 240 SFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A ++ + MR KPN+ T+ ++VN + G E A ++F+++ G+ PDV +YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 299 ALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
L+ Y + +H G PD ++ ++ A +AG
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 165
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 109 NKKWDPIVLMSCVS-------ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
N K+D LM C S + L++ + K L K+A+ Y +LD Y++L+
Sbjct: 396 NIKYDA--LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 453
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C G + KA + ++M + G P++ S + GL + G +A Q + C
Sbjct: 454 HGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPL 513
Query: 222 PSTETYTLMINL 233
E +I+L
Sbjct: 514 ADAEASKALIDL 525
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 72/204 (35%), Gaps = 50/204 (24%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ +C G +EKA ++ EM + G+ P V Y+ I+GL K ++A +
Sbjct: 324 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383
Query: 212 FQRMKRD--------------CCQPST--------------------------------- 224
++ + CC +
Sbjct: 384 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 443
Query: 225 ---ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
Y+++I+ + + AL +M PN + +LV EG+ EA+
Sbjct: 444 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 503
Query: 282 FEQLQGAGIEPDVYAYNALMEAYR 305
+ L D A AL++ R
Sbjct: 504 IQDLLTCCPLADAEASKALIDLNR 527
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C P+ TY +LL+A C S +A V EMR G P+ V YN I+G+ + G
Sbjct: 166 DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 225
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A EI R+ QP +YT ++ A + LF EM KC PN T+
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
LV F R G+ E A ++ +Q+ G P+ N ++ +AY ++ M M
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD SY ++ RAG
Sbjct: 346 GCNPDTISYTTVLRGLCRAG 365
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ YC G L+ A + M +PP A Y I GL G A+ + M
Sbjct: 112 YNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDML 168
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ CQPS TYT+++ K+S A+ + +EMR+ C PNI TY ++N REG +
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
+A+EI +L G +PD+ +Y +++ R + C P+ +++++V
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 288
Query: 326 DAYGRAGLHE 335
+ R G+ E
Sbjct: 289 RFFCRGGMVE 298
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E++D +C+P E T+ +L++ +C G++E+A V ++M ++G P+ + N I+ + K
Sbjct: 269 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 328
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G A + M C P T +YT ++ +A + A +L EM C PN T
Sbjct: 329 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 388
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HMG 313
+ + ++GL E+A ++ E + G + YNAL+ + + R+ ++
Sbjct: 389 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP 448
Query: 314 CEPDRASYNIMVDAYGRA 331
CEP+ +Y ++ A
Sbjct: 449 CEPNTITYTTLLTGLCHA 466
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 13/233 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EA + S +A E+ C P TY +++ C G ++ A+ + + Y
Sbjct: 181 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 240
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y + + GL +F M C P+ T+ +++ + + A
Sbjct: 241 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 300
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+++ +M H C PN ++NA ++G ++A + + G PD +Y ++
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 360
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
A L+ M C P+ ++N + + GL E + L+EL
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ--AIKLIEL 411
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 18/276 (6%)
Query: 90 PPTHATWDDLINVSVQLRLNKKWDPIVLM-----SCVSILLIEAYGQKSLHKKAEFTYLE 144
PP T++ I + Q L ++ ++ + V I+ A + + LE
Sbjct: 383 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 442
Query: 145 LLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
L ++ C P TY LL C + L+ A + M + P +AV +N + + G
Sbjct: 443 LFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKG 502
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A+E+ +M C P+ T+ +++ K S AL+L + + S + TY+
Sbjct: 503 FVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYS 562
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
++V+ +RE EEA ++ +Q G+ P V YN ++ +A + M
Sbjct: 563 SVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSN 622
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
GC P+ ++Y I+++ GL + + Y L EL K
Sbjct: 623 GCMPNESTYIILIEGLAHEGLLK-EARYVLSELYAK 657
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 35/170 (20%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ +L+ +C G +E+A + +M ++G P+ + +N+ +DG+ K N ++A+E+ +
Sbjct: 490 TFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGL 549
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKL----------------------------- 246
T TY+ ++++ + ++ A+++
Sbjct: 550 VSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCET 609
Query: 247 ------FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
F M S+ C PN TY L+ A EGL +EA + +L G+
Sbjct: 610 DQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K++ K E + +++R P TY++LL+ + + L K V+ +M G P V
Sbjct: 187 KNVRKAQEI--FDKMNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVT 244
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y +D L K G ++AV + Q M CQP+T Y+++++ YG + A+ F +M
Sbjct: 245 YGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDME 304
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
P++ Y ALV AF + + A + + ++G GI P+ +N ++
Sbjct: 305 KDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDD 364
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
EAYR+ M C+PD +Y +M+ + C +E+++K
Sbjct: 365 EAYRVFRNMIKRCKPDSDTYTMMIKMF---------CENDKIEMALK 402
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ +T++++++ Y + ++A F M +YG+ + +NS + L K N +KA E
Sbjct: 135 VANVETFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQE 194
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF +M + P +TY++++ +G+A +++++M + C+P+I TY +V+A
Sbjct: 195 IFDKMN-NRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALC 253
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRA 319
+ G EEA + + + G +P + Y+ L+ Y + R+ G PD
Sbjct: 254 KTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVV 313
Query: 320 SYNIMVDAY 328
YN +V A+
Sbjct: 314 VYNALVTAF 322
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG + A T+L++ +P Y L+ A+C + A V +M +
Sbjct: 282 VLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGH 341
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P++ +N ++ L+ G +A +F+ M + C +P ++TYT+MI ++ + K MA
Sbjct: 342 GISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKRC-KPDSDTYTMMIKMFCENDKIEMA 400
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
LK++ MR + P++ T++ L+N +G +A + E + GI P
Sbjct: 401 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRP 449
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+E +G+ K Y ++L + C P TY +++ A C +G +E+A V ++M
Sbjct: 212 ILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSR 271
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ +Y+ + + AV F M++D P Y ++ + K K A
Sbjct: 272 GCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNA 331
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ ++M H PN T+ ++N G +EA +F + +PD Y +++
Sbjct: 332 FRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPDSDTYTMMIKM 390
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGR 330
+ CE D+ + V Y R
Sbjct: 391 F---------CENDKIEMALKVWKYMR 408
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
R ++ G + Y++ + L K Q ++ M+++ + ET+++++ Y +A
Sbjct: 93 RRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGV-ANVETFSIIMRKYARA 151
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
K A+ FN M + N+ + +L+ A + +A+EIF+++ PD Y
Sbjct: 152 QKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-FSPDAKTY 210
Query: 298 NALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG-LHEGKC 338
+ L+E + + S M GC+PD +Y IMVDA + G + E C
Sbjct: 211 SILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVC 263
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P DTY +++K +C + +E A V++ MR PS ++ I+GL G +A
Sbjct: 376 RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQA 435
Query: 209 VEIFQRMKRDCCQPSTETY 227
+ + M +P T+
Sbjct: 436 CVLLEDMIEKGIRPPGSTF 454
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ C +G +E A VF EM + GL P V YN+ + G K G +++ +
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + P T+T +I+ KA A+ L +MR + N T+TAL++ F +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G ++A E+++ GI+P V YNAL+ Y + RM + E PD +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 321 YNIMVDAYGRAG 332
Y+ ++ Y + G
Sbjct: 401 YSTIISGYCKVG 412
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + ++ + E+ +P T+ L+ A C +G LE+A A+ +MR+ G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + V + + IDG K G A+ + M++ QPS Y +IN Y K + +A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L EM + + KP++ TY+ +++ + + G + A ++ +++ G+ PD Y++L+
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A L M +G +PD +Y ++D + + G
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E++ P +Y LL YC G L ++ AVF EM + GL P V + S I
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKC 255
K GN ++AV + +M+ + + T+T +I+ G K F+ AL EMR
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID--GFCKKGFLDDALLAVEEMRKCGI 359
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+P++ Y AL+N + + G + A E+ +++ ++PDV Y+ ++ Y
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 12/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L++A C G LE+A V +MR G P+AV YN+ + + G A +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 212 FQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
M+ + +P+ T+ M+N KA + A K+F+EM P++ +Y L++ +
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ G E+ +F ++ G+ PDV + +L+ +A L+++M G +
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 320 SYNIMVDAYGRAGL 333
++ ++D + + G
Sbjct: 330 TFTALIDGFCKKGF 343
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A E+ P+ Y L+ YC G ++ A + REM
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y++ I G K GN A ++ Q+M + P TY+ +I + + A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF M +P+ TYT L++ +EG E+A + +++ G+ PDV Y+ L+
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMV 325
EA+RL+ ++ H PD Y+ ++
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L A M ++G+ P+ YN + L G ++AV + M+ C P+ TY
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192
Query: 230 MINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++ + +A + A ++ + MR KPN+ T+ ++VN + G E A ++F+++
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 289 GIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
G+ PDV +YN L+ Y + +H G PD ++ ++ A +AG
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 109 NKKWDPIVLMSCVS-------ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
N K+D LM C S + L++ + K L K+A+ Y +LD Y++L+
Sbjct: 538 NIKYD--ALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 595
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C G + KA + ++M + G P++ S + GL + G +A Q + C
Sbjct: 596 HGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPL 655
Query: 222 PSTETYTLMINLYGK 236
E +I+L K
Sbjct: 656 ADAEASKALIDLNRK 670
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 72/204 (35%), Gaps = 50/204 (24%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ +C G +EKA ++ EM + G+ P V Y+ I+GL K ++A +
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 212 FQRMKRD--------------CCQPST--------------------------------- 224
++ + CC +
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585
Query: 225 ---ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
Y+++I+ + + AL +M PN + +LV EG+ EA+
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645
Query: 282 FEQLQGAGIEPDVYAYNALMEAYR 305
+ L D A AL++ R
Sbjct: 646 IQDLLTCCPLADAEASKALIDLNR 669
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 25/115 (21%)
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
PS Y ++ AS A + + M H PN+ TY LV A G EEA +
Sbjct: 116 PSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
++GAG C P+ +YN +V A+ RAG +G
Sbjct: 175 VGDMRGAG------------------------CAPNAVTYNTLVAAFCRAGELDG 205
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 13/226 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +A+ + + C P+ TY LL +G LE+A A+F+EM
Sbjct: 16 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 75
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ +N + GL + G + A+E F++M D C P+ TY+++I+ KA++ A+
Sbjct: 76 -SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCKANRVSQAV 133
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L M++ C P++ TYT LV+ +E A E+ ++ AG P++ YN+L+
Sbjct: 134 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 193
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCS 339
+A L+ M GC P+ +Y ++D + G + C+
Sbjct: 194 CRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ ++S A E+LD+ C+P TY LL C + + A A+ R+M
Sbjct: 153 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 212
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V Y + IDGL K G + A + M P Y ++IN KA + +
Sbjct: 213 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 272
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ L S KP++ TY++++ R +EA + ++ G PDV Y+ L+
Sbjct: 273 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 332
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA+ L M GC+ D +Y+ ++D +AG
Sbjct: 333 LCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAG 372
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 44/196 (22%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
MR +G P+ V YNS IDGL K P +A E+F+ MK C PS TY +++ + K
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 240 SFMALKLFNEM---RSH------------------------------KCKPNICTYTALV 266
A+ LF EM RSH +C PN+ TY+ L+
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCE 315
+ + +A E+ E ++ G PDV Y L++ A+ ++ M GC
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180
Query: 316 PDRASYNIMVDAYGRA 331
P+ +YN ++ RA
Sbjct: 181 PNLVTYNSLLHGLCRA 196
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 11/217 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ + +D RC P TY++L+ C + + +A + M+ G P + Y +
Sbjct: 96 ETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILV 155
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K A E+ + M C P+ TY +++ +A + AL L +M C
Sbjct: 156 DGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCT 215
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN+ TY L++ + G ++A + + G PD+ YN L+ E+ L
Sbjct: 216 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 275
Query: 307 ISR-MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
+ R + G +PD +Y+ ++ R+ + C L
Sbjct: 276 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 312
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + K A +++D P Y +L+ C + ++++ A+ R G
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y+S I GL + +A + +K C P Y+ +I+ KA K A
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L+ M C ++ TY+ L++ + G +EA + ++ G P YN+L+
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
EA L+ M C P +YNI++ R
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ ++ C S L++A + ++ G PP ++Y++ IDGL K G +A ++
Sbjct: 286 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 345
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M D C TY+ +I+ KA + A L M P+ TY +L+
Sbjct: 346 YEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 405
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM------------GCEPDRA 319
+EA E+ E+++ + P YN L+ + R+ G PD
Sbjct: 406 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHI 465
Query: 320 SYNIMVDAYGRA-GLHE 335
+Y+I+++ ++ LHE
Sbjct: 466 TYSILLEGLKKSKDLHE 482
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++KA V M K G+ P + YNS + G G P++A+ ++M+ D +P+ TY+
Sbjct: 225 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 284
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
++N K +S A K+F+ M +P+I TY L+ +EG E+E++F+ + G
Sbjct: 285 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIG 344
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
++PD+ YN L+ EA +L++ M +G +PD +Y +++ Y R
Sbjct: 345 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 397
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 131 QKSLHKKAEFTYLELLDSRC----IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
Q L +A +E+L++ +P TY +L YC SG ++A ++MR G+
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ V Y+S ++ L K G +A +IF M + +P TY ++ + K + + KL
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
F+ M KP+I TY L++ G +EA ++ + G++PD+ Y L+ Y
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 307 ISRMH-----------MGCEPDRASYNIMV 325
+SRM G P+ +YNI++
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIIL 426
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL+ +C G + ++E +F M + G+ P + YN+ IDG G +A ++
Sbjct: 312 PDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 371
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M +P TY +IN Y + S+ AL LF EM S PNI TY ++
Sbjct: 372 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 431
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
A+E++ + +G + ++ YN ++ EA R+ + + + + +
Sbjct: 432 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 491
Query: 321 YNIMVDAYGRAG 332
+NIM+ A + G
Sbjct: 492 FNIMIGALLKCG 503
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ C +G +A +F M K GL P Y + + G K G ++ ++
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M R +P TY +I+ A K A KL M S KP+I TY L+N + R
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++A +F+++ +G+ P++ YN +++
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ YC ++ A A+F+EM G+ P+ + YN + GL A E+
Sbjct: 382 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 441
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ + + Q TY ++++ K + + AL++F + + T+ ++ A +
Sbjct: 442 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 501
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
G +EA+++F G+ PDV Y+ + E
Sbjct: 502 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 532
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ PT TYA+L+ C +G L+ A + K G A+ + + GL A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 209 VEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTA 264
++I +RM C P +Y ++ ++S AL+L + M R P++ +Y
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 265 LVNAFAREGL--------CEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++N F +EG+ ++A E+ + G+ PD YN+++ Y
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 254
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C++G +++A + M G+ P V Y + I+G + A+ +
Sbjct: 347 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 406
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P+ TY +++ ++ A +L+ + + + TY +++ +
Sbjct: 407 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 466
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A RM G PD +
Sbjct: 467 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 526
Query: 321 YNIMVD 326
Y++M +
Sbjct: 527 YSLMAE 532
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + S A + E++ S P TY ++L+ + A+ ++ + K G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
YN + GL K +A+ +FQ + Q T T+ +MI K + A
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 509
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF ++ P++ TY+ + +G EE +++F ++ G D N+++
Sbjct: 510 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR-- 567
Query: 305 RLISRMHMGCEPDRASYNIMVD 326
+L+ R G +Y M+D
Sbjct: 568 KLLQR---GDITRAGTYLFMID 586
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC---QPSTETY 227
E A VF E+ + G S N + + + +P AV + RM R P+ TY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARH-SPAAAVSRYNRMARAGAGKVTPTVHTY 95
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI-FEQLQ 286
++I +A + + + + + T+T L+ + +A +I ++
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 287 GAGIEPDVYAYNALME-------AYRLISRMHM-------GCEPDRASYNIMVDAYGRAG 332
G PDV++YN L++ + + +HM G PD SYN +++ + + G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 333 LH 334
+
Sbjct: 216 IQ 217
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L +A +VF M++ G P V Y + ID K G
Sbjct: 404 EMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAG 463
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ ++Q+M+ P T TY+++IN GKA A KLF EM C PN+ TY
Sbjct: 464 FLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYN 523
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
++ A+ A E++ +Q AG +PD Y+ +M EA + + M
Sbjct: 524 IMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRK 583
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+ G
Sbjct: 584 NWVPDEPVYGLLVDLWGKVG 603
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + + ++ C P TY L+ + +G L+ A ++++M++
Sbjct: 420 LIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAH 479
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A ++F M C P+ TY +MI L KA AL
Sbjct: 480 LSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTAL 539
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ +M++ +P+ TY+ ++ G EEAE IF +++ PD Y L++ +
Sbjct: 540 ELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLW 599
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+ + ++ G P+ + N ++ A+ R +H +Y+L++
Sbjct: 600 GKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLR--VHRLSDAYNLLQ 648
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + ++ M RD CQP+ TY +I+ YG+A+
Sbjct: 371 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 430
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA- 299
A+ +F+ M+ C+P+ TY L++ A+ G + A +++++Q A + PD + Y+
Sbjct: 431 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 490
Query: 300 ---------LMEAYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
L A++L M GC P+ +YNIM+ + AG
Sbjct: 491 INCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGF 550
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 551 QPDKVTYSIVMEVLGH 566
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++ ++ P TY++++ +G L A +F EM G
Sbjct: 455 LIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQG 514
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN I K N A+E+++ M+ QP TY++++ + G A
Sbjct: 515 CVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAE 574
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F EM+ P+ Y LV+ + + G E++ E ++ + AG+ P+V N+L+ A+
Sbjct: 575 AIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAF 634
Query: 305 RLISR-----------MHMGCEPDRASYNIMV 325
+ R + +G +P +Y +++
Sbjct: 635 LRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL 666
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C+P TY +++ + A ++R+M+
Sbjct: 489 VIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNA 548
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G+ ++A IF MKR P Y L+++L+GK +
Sbjct: 549 GFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKS 608
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M + PN+ T +L++AF R +A + + + G++P + Y L+
Sbjct: 609 WEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL 666
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++ ++ P + TY+++++ G LE+AEA+F EM++ P VY +D K
Sbjct: 542 YRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGK 601
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN +K+ E +Q M P+ T +++ + + + A L M +P++ T
Sbjct: 602 VGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQT 661
Query: 262 YTALVNAFAREGLCEEAEEIFE 283
YT L++ C EA F+
Sbjct: 662 YTLLLSC------CTEARSSFD 677
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G ++AE + E+ +P E Y LL+ + G +EK+ ++ M
Sbjct: 559 IVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNA 618
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
GL P+ NS + L+ A + Q M R QPS +TYTL+++ +A SF
Sbjct: 619 GLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSF 676
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 45/268 (16%)
Query: 110 KKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
+K +P +L V I+L+ + + KKA E+ C P E + LL A C +G
Sbjct: 191 RKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGS 250
Query: 170 LEKAEAVFREMR----------------------------------KYGLPPSAVVYNSY 195
+++A ++F +MR + G P VVYN+
Sbjct: 251 VKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNL 310
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ G + G + A ++ MK+ C P+ ++T++I + K K A+++F EM+ C
Sbjct: 311 LGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGC 370
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+ ++ TYT L++ F + G ++A EI + + G +P +Y +M A+
Sbjct: 371 EADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECME 430
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAG 332
LI M +GC PD YN M+ + G
Sbjct: 431 LIEEMRKIGCVPDLNIYNTMIRLVCKLG 458
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y Q + A E+ C P ++ +L++++C + +++A +F EM+ G
Sbjct: 310 LLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSG 369
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V Y + I G K GN KA EI M + PS +Y ++ + K + +
Sbjct: 370 CEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECM 429
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L EMR C P++ Y ++ + G +EA ++ ++Q G+ P + Y ++ +
Sbjct: 430 ELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGF 489
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + +A + E+ S C TY L+ +C G +KA + +M +
Sbjct: 344 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 403
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS + Y + K ++ +E+ + M++ C P Y MI L K A
Sbjct: 404 GHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEA 463
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI--EPDVYAY---- 297
++L+ EM++ P + TY +V+ F +G EA + F+++ G+ P
Sbjct: 464 VRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELT 523
Query: 298 NALMEAYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
NAL+ A +L +M GCE + +++ I + A G + CSY L +
Sbjct: 524 NALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLM 583
Query: 351 P 351
P
Sbjct: 584 P 584
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++AY + + ++AE ++E+ PTE T+ +L+ AY E E + EM++ G
Sbjct: 372 LMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETG 431
Query: 185 LPPSAVVYNSYIDGLLKGGN-PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+A Y I K N A + F +MK+D +P++ +YT +I+ Y + A
Sbjct: 432 LKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKA 491
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
F M+ KP+I TYTAL++AF R G + +I++ ++ +E +N L+
Sbjct: 492 YAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDG 551
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLH 334
EA +IS+ ++G P +YN++++AY R G H
Sbjct: 552 FAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRH 593
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGL 169
KW VL + + +E ++L L L+ + + + Y L+ AYC S
Sbjct: 328 KWGEEVLGALIKSFCVEGLMSEAL------IILSELEKKGVSSNTIVYNTLMDAYCKSNR 381
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+E+AE +F EM+ G+ P+ +N + + P+ ++ M+ +P+ ++YT
Sbjct: 382 VEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTC 441
Query: 230 MINLYGKASK-SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ YGK S MA F +M+ KP +YTAL++A++ G E+A FE +Q
Sbjct: 442 IISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQRE 501
Query: 289 GIEPDVYAYNALMEAYR-------------LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
GI+P + Y AL++A+R L+ R + E R ++N +VD + + G ++
Sbjct: 502 GIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKV--EGTRVTFNTLVDGFAKHGYYK 559
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I AYG QK++ A +L++ PT +Y L+ AY +SG EKA A F M++
Sbjct: 442 IISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQRE 501
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS Y + +D + G+ Q ++I++ M+R+ + + T+ +++ + K A
Sbjct: 502 GIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEA 561
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ ++ + P + TY L+NA+AR G + E+ E++ ++PD Y+ ++ A
Sbjct: 562 RDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTMIYA 621
Query: 304 Y 304
+
Sbjct: 622 F 622
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-ALKLFNE 249
VYN+ I GLL + A ++++ M+ D P T ++M+ + K S A + F +
Sbjct: 262 VYNAAISGLLSSARYEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEK 321
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M K AL+ +F EGL EA I +L+ G+ + YN LM+AY +R
Sbjct: 322 MNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNR 381
Query: 310 MH-----------MGCEPDRASYNIMVDAYGR 330
+ G +P A++NI++ AY R
Sbjct: 382 VEEAEGLFVEMKTKGIKPTEATFNILMYAYSR 413
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
KS H + + L+ R P TY L +C +A V R M + G+ P+
Sbjct: 177 KSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTT 236
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKR-----DCCQPSTETYTLMINLYGKASKSFMALKL 246
YN + G + G + A + F +MK+ + C+P +YT M++ G A + A K+
Sbjct: 237 YNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKV 296
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
F+EM C P++ TY AL+ ++G E+A +F+ + G P+V Y L+
Sbjct: 297 FDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCH 356
Query: 302 -----EAYRLISRM-HMGCEPDRASYNIMV 325
+L+ RM + GCEP +YN+++
Sbjct: 357 AGKIDRGLKLLERMKNGGCEPIVQTYNVLI 386
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P +Y ++ ++G LEKA VF EM K G PS YN+ I + K GN +
Sbjct: 267 DESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVE 326
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV +F M P+ TYT++I A K LKL M++ C+P + TY L+
Sbjct: 327 DAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLI 386
Query: 267 NAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEA 303
EG E+ ++FE++ +G P+ YN ++ A
Sbjct: 387 RYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISA 424
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ G +KA + E+ C P+ TY L++ C G +E A VF M G
Sbjct: 280 MVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKG 339
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y I GL G + +++ +RMK C+P +TY ++I + + L
Sbjct: 340 YVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGL 399
Query: 245 KLFNEM-RSHKCKPNICTYTALVNAFAREGLCEE---AEEIFEQLQGAGIEPDVYAYNAL 300
LF +M + +C PN TY +++A E+ A + +++ G P + +N +
Sbjct: 400 DLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRV 459
Query: 301 MEAYRL 306
+ L
Sbjct: 460 LNGLML 465
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 30/178 (16%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
LL A S KA ++ R + + P V YN+ DG + + +A+++ + M
Sbjct: 171 LLDALSKSRHAGKAASLVRALEQR-FTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESG 229
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMR-----SHKCKPNICTYTALVNAFAREGL 274
P+ TY +++ + +A + A F +M+ CKP++ +YT +V+ G
Sbjct: 230 IAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQ 289
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
E+A ++F+++ G C P A+YN ++ + G
Sbjct: 290 LEKARKVFDEMAKEG------------------------CAPSVATYNALIQVICKKG 323
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y +K + + A + + P E TY L+ +C G ++A AVF++ G
Sbjct: 301 IIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKG 360
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L PS V+YN+ I GL + G A+++ M + C P+ TY L+IN K A
Sbjct: 361 LRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDAS 420
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L ++ + C P+I TY L++ + ++ + A E+ ++ G+ PDV YN L+
Sbjct: 421 HLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGL 480
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
E + M GC P+ +YNI+VD+ +A
Sbjct: 481 CKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY ++ YC G+++ A V ++ G P Y S I+G K G+P +A+ +
Sbjct: 293 PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAV 352
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ +PS Y +I + AL+L NEM + C PNI TY ++N +
Sbjct: 353 FKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCK 412
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G +A + + G PD++ YN L++ Y +++RM G PD +
Sbjct: 413 MGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVIT 472
Query: 321 YNIMVDAYGRAGLHE 335
YN +++ +AG E
Sbjct: 473 YNTLLNGLCKAGKSE 487
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ YC L+ A + M G+ P + YN+ ++GL K G ++ +
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EIF+ M+ C P+ TY ++++ KA K A+ L EM+S KP++ ++ L F
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550
Query: 270 AREGLCEEAEEIFEQLQGA-GIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
+ G + A ++F +++ + YN ++ A+ M+M GC+PD
Sbjct: 551 CKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPD 610
Query: 318 RASYNIMVDAYGRAG 332
+Y +++D + + G
Sbjct: 611 NYTYRVVIDGFCKMG 625
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 12/216 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Q+ L A E+ ++ C+P TY L++ C G + A + + G
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP YN+ IDG K A E+ RM P TY ++N KA KS +
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
++F M C PNI TY +V++ + EA ++ +++ G++PDV ++ L
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550
Query: 303 --------AYRLISRMHMGCE--PDRASYNIMVDAY 328
AY+L RM + A+YNI+V A+
Sbjct: 551 CKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAF 586
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E Y +K Y G +++A F M Y PS +N+ ++ L++ G +A +++
Sbjct: 76 EGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYM 135
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
RM+ Q TYT+ I + K ++ + AL+L M C N Y +V G
Sbjct: 136 RMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSG 195
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRASYN 322
+ A E+F+++ + PDV A+N L+ E+ RL+ + + G P+ ++N
Sbjct: 196 EHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFN 255
Query: 323 IMVDAYGRAG 332
I V R G
Sbjct: 256 IFVQGLCREG 265
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
H ++++ + ++R N L+ I ++ YG+K ++A T+ + C P
Sbjct: 53 HGEFEEMEKLLSEMRENVNN---ALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDP 109
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+ ++ ++ G +A V+ MR G+ Y I K P A+ +
Sbjct: 110 SVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLL 169
Query: 213 QRMKRDCCQPSTETY-TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M C + Y T++ LY A +LF+EM + P++ + LV+ +
Sbjct: 170 RNMPELGCDSNAVAYCTVVAGLYDSGEHDH-ARELFDEMLARCLCPDVVAFNKLVHVLCK 228
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNA-------------------LMEAYRLISRM-H 311
+GL E+E + ++ G+ P+++ +N ++EA + +M +
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288
Query: 312 MGCEPDRASYNIMVDAYGRAGL 333
G EPD +YN ++D Y + G+
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGM 310
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P ++ L +C G ++ A +FR M K Y + + YN + + N A++
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F MK C P TY ++I+ + K K E + P++ T+ ++N
Sbjct: 598 LFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLC 657
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ EA I + GI P+ N + EA
Sbjct: 658 VKDKVHEAVGIIHLMLQKGIVPE--TVNTIFEA 688
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ C +G +E A VF EM + GL P V YN+ + G K G +A+ +
Sbjct: 258 PNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSV 317
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + P T+T +I++ KA A+ L +MR + N T+TAL++ F +
Sbjct: 318 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCK 377
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
+G ++A ++ I+P V YNAL+ Y ++ RM G +PD +
Sbjct: 378 KGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVT 437
Query: 321 YNIMVDAY 328
Y+ ++ AY
Sbjct: 438 YSTIISAY 445
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + +A + E+ +P T+ L+ C +G LE+A + R+MR+ G
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG 360
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + V + + IDG K G A+ + MK+ +PS Y +IN Y + A
Sbjct: 361 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAR 420
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +EM + KP++ TY+ +++A+ + A E+ +Q+ G+ PD Y++L+
Sbjct: 421 ELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 480
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A+ L M +G +PD +Y ++D + + G
Sbjct: 481 CGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ A + E++ P +Y L+ YC +G +A +VF EM + G+ P V + S
Sbjct: 277 EDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 336
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSH 253
I + K GN ++AV + ++M+ Q + T+T +I+ + K K F+ AL M+
Sbjct: 337 IHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCK--KGFLDDALLAVRGMKQC 394
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ KP++ Y AL+N + G +EA E+ +++ G++PDV Y+ ++ AY
Sbjct: 395 RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L P TY +L++A C G ++A ++ R+MR G P+ V YN+ + + G
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 240
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A + M+ +P+ T+ M+N KA K A K+F+EM P+ +Y
Sbjct: 241 VDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNT 300
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
LV + + G EA +F ++ GI PDV + +L+ A L+ +M G
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG 360
Query: 314 CEPDRASYNIMVDAYGRAG 332
+ + ++ ++D + + G
Sbjct: 361 LQMNEVTFTALIDGFCKKG 379
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A + R P+ Y L+ YCM G +++A + EM G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ I K + A E+ Q+M P TY+ +I + + A
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL---- 300
LF M +P+ TYT+L++ +EG E A + +++ AG+ PDV Y+ L
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550
Query: 301 ------MEAYRLISRMH 311
MEA +L+ +++
Sbjct: 551 SKSARAMEAQQLLFKLY 567
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L A F M G+ P+ YN + L G+ ++A+ I + M+ C P+ TY
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 230
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
++ + +A + A +L MR KPN+ T+ ++VN + G E+A ++F+++ G
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ PD +YN L+ EA + + M G PD ++ ++ +AG
Sbjct: 291 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAG 344
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L+ +P TY+ L++ C L A +F+ M K GL P Y S IDG K G
Sbjct: 460 QMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA----LKLFNE---------- 249
N + A+ + +M + P TY+++IN K++++ A KL++E
Sbjct: 520 NVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYD 579
Query: 250 MRSHKC-KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
H C K + + AL+ F +GL EA+++++ + D Y+ L+ +
Sbjct: 580 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGH 635
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 109 NKKWDPIVLMSCV------SIL-LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
N K+D LM C S+L L++ + K L +A+ Y +LD Y++L+
Sbjct: 575 NTKYD--ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI 632
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C +G + KA + ++M + G P++ S I GL + G +A ++ Q++ C
Sbjct: 633 HGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSL 692
Query: 222 PSTETYTLMINL 233
E +I+L
Sbjct: 693 ADAEASKALIDL 704
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P++ Y A++ A + L A F+ + G+ P+VY YN L+ EA +
Sbjct: 154 PSVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAGLHEG 336
+ M GC P+ +YN +V A+ RAG +G
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 243
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 50/201 (24%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ +C G +E A ++ +M K G+ P V Y+ I+GL K +A ++
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562
Query: 212 FQRMKRD--------------CCQPST--------------------------------- 224
++ + CC+ +
Sbjct: 563 LFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 622
Query: 225 ---ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
Y+++I+ + +A AL +M PN + +L+ G+ EA+++
Sbjct: 623 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQV 682
Query: 282 FEQLQGAGIEPDVYAYNALME 302
+QL D A AL++
Sbjct: 683 IQQLLNYCSLADAEASKALID 703
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A Q +A T+ ++ + +PT ++ ++ C + L A VF EM
Sbjct: 173 LMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 232
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V Y+ IDGL K +A ++ RM + C+P YT ++ + A + AL
Sbjct: 233 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSAL 292
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M S C P++ TYT +++ + G ++A EIF +L P+V Y+AL+ Y
Sbjct: 293 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 352
Query: 305 RLISRM--------HMGCEPDRASYNIMV 325
SR+ M C P+ +YN M+
Sbjct: 353 CRASRVDEGGKVMREMACRPNVVTYNTMI 381
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ C L+ A AV E RK P V YN+ + L + G +A+
Sbjct: 128 CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEAL 187
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F +M + P+ ++ +I +A + AL++FNEM PN+ TY+ +++
Sbjct: 188 ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 247
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ +EA+++ +++ G PD+ AY L+ A L+ RM GC PD
Sbjct: 248 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 307
Query: 319 ASYNIMVDAYGRAG----LHE-------GKCSYSLVELS 346
+Y +++D + G HE KCS ++V S
Sbjct: 308 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYS 346
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y L+ + +G L+ A + R M G P V Y ID L K G A
Sbjct: 268 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 327
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
EIF+ + + C P+ TY+ +I Y +AS+ K+ EM C+PN+ TY ++
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGL 384
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
+ EEA +F ++ G PD Y L A R+I +
Sbjct: 385 SMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQ 424
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 13/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ-R 214
TY +L++ +C + L+ A ++ REM G+ + + + GL + G +A+E F
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREG 273
++ QP +YT +IN K + A LF +M + C+PN TY ALV+ ++
Sbjct: 87 LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYN 322
+ A + + + PDV YN LM A + R+ G P S+N
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206
Query: 323 IMVDAYGRA 331
++ RA
Sbjct: 207 AIITGLCRA 215
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY++L+ + GL + ++ M++ G+ P+A YN I GG KA +
Sbjct: 225 VPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFK 284
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M+ TY ++I + K A+KL +++ PNI TY L+N F
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMGC-EPDRA 319
G + A +F QL+ +G+ P + YN L+ Y L+ M C P +
Sbjct: 345 DVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404
Query: 320 SYNIMVDAYGRAGLHEGKCS-YSLVELS 346
+Y I++DA+ R E C +SL+E S
Sbjct: 405 TYTILIDAFARLNYTEKACEMHSLMEKS 432
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 50/257 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-- 181
+L+ + ++ L ++ Y + S +P Y L+ YC G+++KA VF EMR
Sbjct: 233 VLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREK 292
Query: 182 ---------------------------------KYGLPPSAVVYNSYIDGLLKGGNPQKA 208
K GL P+ V YN I+G G A
Sbjct: 293 GIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTA 352
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
V +F ++K P+ TY +I Y K AL L EM P+ TYT L++A
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCE 315
FAR E+A E+ ++ +G+ PDVY Y+ L+ ++ + MH+ +
Sbjct: 413 FARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHL--Q 470
Query: 316 PDRASYNIMVDAYGRAG 332
P+ YN M+ Y + G
Sbjct: 471 PNSVIYNTMIHGYCKEG 487
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L S+ + ++ +++K C +G K + + ++GL P+ V+Y + IDG K GN
Sbjct: 150 LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNV 209
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A +F +M R P+ TY++++N + K +++ M+ PN Y L
Sbjct: 210 MLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGC 314
++ + G+ ++A ++F +++ GI V YN L+ EA +L+ +++ +G
Sbjct: 270 ISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 315 EPDRASYNIMVDAYGRAG 332
P+ +YNI+++ + G
Sbjct: 330 SPNIVTYNILINGFCDVG 347
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 146 LDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ RCI P++ TY +L+ A+ EKA + M K GL P Y+ I GL GN
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGN 453
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A ++F+ + QP++ Y MI+ Y K S+ AL+L NEM PN+ ++ +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ R+ +EAE + Q+ +G++P V Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C G + A+ +F +M + GL P+ Y+ ++G K G ++ ++
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ MKR P+ Y +I+ Y A K+F EMR + TY L+ R
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
EA ++ ++ G+ P++ YN L+ + + +M G P +
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 321 YNIMVDAYGRA 331
YN ++ Y +
Sbjct: 371 YNTLIAGYSKV 381
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 22/221 (9%)
Query: 134 LHKKAEFTYLELL-----DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR------K 182
L K EF + LL D PT T+ +L+ C ++ A VF +M+ K
Sbjct: 162 LGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETK 221
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P ++YN+ IDGL K G ++A+ + +M+ D C P+T T+ +IN Y ++ + +
Sbjct: 222 VFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEV 281
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A KLFNEM + + +PN+ T LV+ + A E F +Q G++ + Y +
Sbjct: 282 AHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFIN 341
Query: 303 AYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
A+ ++ M+ GC PD Y ++ +AG
Sbjct: 342 AFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAG 382
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C PT T+ L+ YC SG +E A +F EM + P+ + N+ +DG+ K A
Sbjct: 258 QCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTA 317
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
VE F+ M++ + + TYT+ IN + + A++ +EM C P+ Y L+
Sbjct: 318 VEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICG 377
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
A+ G ++A + +L+ AG D YN L+ A ++ M + G +PD
Sbjct: 378 LAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPD 437
Query: 318 RASYNIMVDAYGRAG 332
+YN ++ + + G
Sbjct: 438 SVTYNTLISYFSKIG 452
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 87 DSLPPTHATWDDLIN-------VSVQLRL-----NKKWDPIVLMSCVSILLIEAYGQKSL 134
D PT AT++ LIN + V +L N + +P V+ ++ L+ +
Sbjct: 257 DQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVI--TLNTLVDGMCKHNRI 314
Query: 135 HKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
EF ++ + + + TY + + A+C + KA EM K G P AVVY
Sbjct: 315 STAVEF--FRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYY 372
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ I GL + G A + ++K Y ++I+ + K +K A + NEM
Sbjct: 373 TLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELA 432
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEAYRLISRMHM 312
KP+ TY L++ F++ G + A + +++ + G+ P V+ Y AL+ AY L + +
Sbjct: 433 GVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDE 492
Query: 313 GCE-------------PDRASYNIMVDA 327
+ P+ YNI++D+
Sbjct: 493 AIKIFKEMNNVASKVPPNTVIYNILIDS 520
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG--LPPSAVVYNSYIDGLLKGGNPQKAV 209
PT TY L+ AYC++ +++A +F+EM +PP+ V+YN ID L K A+
Sbjct: 472 PTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFAL 531
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ MK P+T TY + + A KL + M C P+ T L
Sbjct: 532 SLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWL 591
Query: 270 AREG 273
+ G
Sbjct: 592 SAVG 595
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 6/187 (3%)
Query: 120 CVSILLIEAYGQKSLHKKAEF-TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
C ++L+ E + L + E+ +EL + P TY L+ + G + A +
Sbjct: 405 CYNVLISEFCKKNKLDRAQEWLNEMELAGVK--PDSVTYNTLISYFSKIGNFKLAHKFMK 462
Query: 179 EM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ--PSTETYTLMINLYG 235
+M + GL P+ Y + I N +A++IF+ M + P+T Y ++I+
Sbjct: 463 KMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLC 522
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K ++ AL L ++M+ PN TY ++ A + ++A ++ +++ PD
Sbjct: 523 KQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYI 582
Query: 296 AYNALME 302
L E
Sbjct: 583 TMEILTE 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 89/230 (38%), Gaps = 58/230 (25%)
Query: 155 DTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
DT AL L+ C SG A + + A N+ + GL K K +
Sbjct: 116 DTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLM 175
Query: 213 QRMKRDCCQPSTETYTLMIN----------------------------------LYG--- 235
++MK QP+ T+ ++IN +Y
Sbjct: 176 RKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLI 235
Query: 236 ----KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
K + AL L +MRS +C P T+ L+N + R G E A ++F +++ A IE
Sbjct: 236 DGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIE 295
Query: 292 PDVYAYNAL-------------MEAYRLISRMHMGCEPDRASYNIMVDAY 328
P+V N L +E +R++ + G + + +Y + ++A+
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVEFFRVMQQ--KGLKGNNVTYTVFINAF 343
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI+ Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A A+F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M P TY +I YG K + A L +EM KP+ TYT L++
Sbjct: 264 YRQMLSQSLLPDLITYNTLI--YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG E A E +++ I D AY AL+ +A +++ M +G +P+
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEI 381
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 382 GTYTMIINEFCKKG 395
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+ Q DS T W L P+ +++ L+N +++ L++ + +M +
Sbjct: 152 IXLAQSVFDSITKW----GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++R+M
Sbjct: 208 TYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L++A+ + EM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ + A E +RM ++ + YT +I+ + +S A
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAE 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+ EM S KP I TYT ++N F ++G ++ +++Q G P+V
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNV 416
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + KGG A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L + M++ +P++ TY+ L+N +E ++A +F+++ G+ P+
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 45/268 (16%)
Query: 110 KKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
+K +P +L V I+L+ + + KKA E+ C P E + LL A C +G
Sbjct: 168 RKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGS 227
Query: 170 LEKAEAVFREMR----------------------------------KYGLPPSAVVYNSY 195
+++A ++F +MR + G P VVYN+
Sbjct: 228 VKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNL 287
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ G + G + A ++ MK+ C P+ ++T++I + K K A+++F EM+ C
Sbjct: 288 LGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGC 347
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+ ++ TYT L++ F + G ++A EI + + G +P +Y +M A+
Sbjct: 348 EADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECME 407
Query: 306 LISRMH-MGCEPDRASYNIMVDAYGRAG 332
LI M +GC PD YN M+ + G
Sbjct: 408 LIEEMRKIGCVPDLNIYNTMIRLVCKLG 435
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y Q + A E+ C P ++ +L++++C + +++A +F EM+ G
Sbjct: 287 LLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSG 346
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V Y + I G K GN KA EI M + PS +Y ++ + K + +
Sbjct: 347 CEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECM 406
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L EMR C P++ Y ++ + G +EA ++ ++Q G+ P + Y ++ +
Sbjct: 407 ELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGF 466
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+++ + +A + E+ S C TY L+ +C G +KA + +M +
Sbjct: 321 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 380
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS + Y + K ++ +E+ + M++ C P Y MI L K A
Sbjct: 381 GHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEA 440
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI--EPDVYAY---- 297
++L+ EM++ P + TY +V+ F +G EA + F+++ G+ P
Sbjct: 441 VRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELT 500
Query: 298 NALMEAYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
NAL+ A +L +M GCE + +++ I + A G + CSY L
Sbjct: 501 NALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCL 552
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 132/264 (50%), Gaps = 20/264 (7%)
Query: 89 LPPTHATWDDLI-------NVSVQLRLNKKWDP--IVLMSCVSILLIEAYGQKSLHKKAE 139
L PT AT+ ++ N++ L + ++ D + + ++++ Y + A
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 361
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ +++ + P TY +L+ A+C +G ++KA V ++ L P+ Y S +DG
Sbjct: 362 KVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGY 421
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+KGG+ QKA+E+F R+K +P +Y +++ KA + A + +EM ++ PN
Sbjct: 422 VKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNE 481
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------YRLISRMHM 312
+YTAL +AR G E+A +F++++ + D+ AY AL++A R +
Sbjct: 482 RSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQ 541
Query: 313 ----GCEPDRASYNIMVDAYGRAG 332
G + +R +Y M+D + R G
Sbjct: 542 ITDAGLKHNRITYCTMLDGWARKG 565
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
I L V +I Y ++ AE + + +P Y +++AYC +G +E E
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A+ +M + G + +Y + ++G + + +K + F R+K P+ TY ++ L+
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 316
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
KA AL + EM H PN Y +++ +AR G A +++E + AG++PD+
Sbjct: 317 TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 376
Query: 295 YAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
YN L+ A+ RM P +Y ++D Y + G
Sbjct: 377 VTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGG 425
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + + A E+L E + ++ Y +G E AE F + +
Sbjct: 172 LIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAEN 231
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P +VYNS + + GN + + +M+ + Q + YT ++N + + L
Sbjct: 232 LVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCL 291
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
F+ +++ P TY +V F + G +A +I E++ G+ P+ Y +M+
Sbjct: 292 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGY 351
Query: 303 --------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A+++ M G +PD +YNI+V A+ +AG
Sbjct: 352 ARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAG 390
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 6/176 (3%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L + +P E +Y L + Y +G +EKA +F+ M+K L V Y + + K G
Sbjct: 471 EMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSG 530
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
Q+AVE+FQ++ + + TY M++ + + + A L +M+ H + YT
Sbjct: 531 AMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYT 590
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA 319
+ + A R G EE E ++ +E + Y L+ + +PD+A
Sbjct: 591 SFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWL------AAADPDQA 640
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+ + KA + +R +PT +TY +L Y G ++KA VF ++
Sbjct: 381 ILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTA 440
Query: 184 GLPPSAVVYNSYIDGLLKG-----------------------------------GNPQKA 208
GL P V YNS + GL K G+ +KA
Sbjct: 441 GLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKA 500
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+FQRMK++ Y ++ K+ A+++F ++ K N TY +++
Sbjct: 501 FGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDG 560
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+AR+G +A ++ + +Q G D Y + ++A
Sbjct: 561 WARKGELSKARDLLKDMQKHGFHLDTICYTSFIKA 595
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ Y + A T+ + S P Y L+ AY + +E A A EM
Sbjct: 136 LLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQ 195
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V+ S I G GN + A F++ K + P Y ++ Y +A
Sbjct: 196 GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETV 255
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M + N+ YT ++N FA E+ F +L+ G+ P Y +++
Sbjct: 256 EALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKL 315
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ M G P++ Y +++D Y R G
Sbjct: 316 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGG 355
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y LLKA C SG +++A VF+++ GL + + Y + +DG + G KA ++ + M
Sbjct: 518 AYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDM 577
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ T YT I ++ + + MR K + N TYT L++ +
Sbjct: 578 QKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADP 637
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM 301
++A +EQ + +G++ D N L+
Sbjct: 638 DQAISCYEQAKASGLQLDSALSNCLL 663
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y LL+ Y G A A F MR + P+ +Y S I + + + AV
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M Q + + +I+ Y A + A F + ++ P Y ++V A+ +
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHM----GCEPDRAS 320
G E E + Q++ G + ++ Y ++ + + +S H G P A+
Sbjct: 249 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 308
Query: 321 YNIMVDAYGRAG 332
Y +V + +AG
Sbjct: 309 YGCIVKLFTKAG 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ GN K V FQ + + P Y L+++ Y + A F MR+ KPN+
Sbjct: 111 IDAGNWHKIVNAFQVIDK----PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNV 166
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG------ 313
YT+L++A+A E A E++ GI+ + + +++ Y
Sbjct: 167 HIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEK 226
Query: 314 -----CEPDRASYNIMVDAYGRAG 332
P YN +V AY +AG
Sbjct: 227 FKAENLVPGGIVYNSIVQAYCQAG 250
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 60/128 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A + ++A + ++ D+ TY +L + G L KA + ++M+K+G
Sbjct: 522 LLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHG 581
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ Y S+I + G+ ++ E M+ + + TYT +I+ + A+ A+
Sbjct: 582 FHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAI 641
Query: 245 KLFNEMRS 252
+ + ++
Sbjct: 642 SCYEQAKA 649
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 141 TYLELLDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
T L ++ + +P TY L+ +C G + +A +FREM G PS V YN +DG
Sbjct: 363 TLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGY 422
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+K G+ ++A + M++ P TY +++ + K +ALKLF EM+ +PN+
Sbjct: 423 IKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNV 482
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
YTAL++ A+EG EEA ++++ + AG+ PD Y+AL+
Sbjct: 483 VAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 46/257 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY + ++A + E + + P E TY +L+ +C G +E AE + +M+ G
Sbjct: 243 VINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRG 302
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR---------------DCCQ-------- 221
+ + +++N+ IDG + G A+++ M++ C+
Sbjct: 303 VGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAK 362
Query: 222 ------------PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
P+ TYT +I+++ K A +LF EM P++ TY +++ +
Sbjct: 363 TLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGY 422
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
++G EAE ++++ G+ PDVY Y +L+ A +L M H G EP+
Sbjct: 423 IKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNV 482
Query: 319 ASYNIMVDAYGRAGLHE 335
+Y ++ + G E
Sbjct: 483 VAYTALISGLAKEGRSE 499
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++++ +C SG ++ A A+ EM ++G+ +A+ YNS +D ++ + + E+ + M+
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ + TYT++++ A + +EM++ ++ YTA++NA+ R G
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVD 326
A E+F++ G GIEP+ Y L+ + I +M G ++ +N M+D
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315
Query: 327 AYGRAGL 333
Y R G+
Sbjct: 316 GYCRQGM 322
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++++ I T TY +L+ + +G + K EAV EM+ + +Y + I+ +
Sbjct: 190 LEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCR 249
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN ++A E+F + +P+ TY ++IN + K + A L +M+ N
Sbjct: 250 AGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQII 309
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-------HM-- 312
+ +++ + R+G+ + A ++ ++ GIE DVY YN L ++RM H+
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 313 --GCEPDRASYNIMVDAYGRAG 332
G P+ +Y ++ + + G
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEG 391
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L C + +A+ + M + G+PP+ V Y + I K G+ +A +F+ M
Sbjct: 344 TYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREM 403
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
PS TY +M++ Y K A + EM P++ TY +LV+ G
Sbjct: 404 AGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKV 463
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A ++FE+++ G EP+V AY AL+ EA++L M G PD + Y+ +
Sbjct: 464 DVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSAL 523
Query: 325 V 325
V
Sbjct: 524 V 524
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ +A + E+ +P+ TY +++ Y G + +AE +EM K G
Sbjct: 383 LISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKG 442
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y S + G G A+++F+ MK +P+ YT +I+ K +S A
Sbjct: 443 LVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAF 502
Query: 245 KLFNEMRSHKCKPNICTYTALVNAF 269
+L+++M P+ Y+ALV +
Sbjct: 503 QLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 73 VQREVDSNTIWDAF--DSLPPTHATWDDLINVSVQ-------LRLNKKWDPIVLMSCVSI 123
V R ++ T+ +PP + T+ LI++ + RL ++ M V
Sbjct: 355 VNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVT 414
Query: 124 --LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
++++ Y +K ++AE E+ +P TYA L+ +C++G ++ A +F EM+
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G P+ V Y + I GL K G ++A +++ M + P Y+ ++
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++ Y K + +L P + +L+KAY G+L++A +F EMR+
Sbjct: 361 IMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQ 420
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V Y++ I L + G AVE F +M PS TY +I + A
Sbjct: 421 GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA 480
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +M + +P+I + ++N + G +A+ IF+ G+ P+V YN LM+
Sbjct: 481 KDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDG 540
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAYGRAG-LHEG 336
Y L+ +M G +P+ Y +V+ Y + G + EG
Sbjct: 541 YCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+AY + + +A + E+ + P TY+ ++ A C G ++ A F +M
Sbjct: 396 VLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ 455
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS Y+ I G G+ KA ++ +M +P + +IN K + A
Sbjct: 456 GVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDA 515
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+F+ S PN+ Y L++ + G E A +F+ + AGI+P+V Y L+
Sbjct: 516 QNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNG 575
Query: 304 YRLISR-----------MHMGCEPDRASYNIMVDAYGRAG 332
Y + R +H G +P YNI++ +AG
Sbjct: 576 YCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAG 615
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A + KAE +++D +P TY L+ Y +G ++A V ++M G
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V NS + L K G + A ++F M + +Y +M+N Y
Sbjct: 317 ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLT 376
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LFN M S P+ + L+ A+A+ G+ + A IF +++ G+EPDV Y+ ++ A
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436
Query: 305 RLISRMHMGCEPDRASYNIMVD 326
I +M E +N M+D
Sbjct: 437 CRIGKMDDAVE----KFNQMID 454
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + ++ KA + E++ P TY ++ A C + ++KAEA+ R+M G
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YNS I G G ++AV + ++M P T ++ K K A
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+ M K +I +Y ++N +A +G + E+F + GI PD + +N L++AY
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401
Query: 305 R---LISRMHM--------GCEPDRASYNIMVDAYGRAG 332
++ R + G EPD +Y+ ++ A R G
Sbjct: 402 AKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIG 440
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 25/283 (8%)
Query: 75 REVDSNTIWDAFD-----SLPPTHATWDDLINVSVQLRLNKKWDPIV-LMSCVSIL---- 124
+E D N D F+ + P +T++ ++N + R K + I+ M +L
Sbjct: 228 KEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNW 287
Query: 125 ----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
LI Y K+A ++ +P T L+ + C G ++ A VF M
Sbjct: 288 TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSM 347
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G Y ++G G E+F M D P + + ++I Y K
Sbjct: 348 AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGML 407
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +FNEMR +P++ TY+ ++ A R G ++A E F Q+ G+ P + Y+ L
Sbjct: 408 DRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467
Query: 301 MEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
++ + ++ M+ G PD +N +++ + G
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG 510
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 48/232 (20%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP--PSAVVYNSYIDGLLKGGNPQK 207
C+P +Y ++LK+ C +A+ + R M + G P+AV YN+ IDG K G+ K
Sbjct: 175 CVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNK 234
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++F M + P TY ++N KA A + +M P+ TY +L+
Sbjct: 235 ACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIY 294
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM----- 312
++ G +EA + +++ GI PDV N+LM +A + M M
Sbjct: 295 GYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKT 354
Query: 313 -------------------------------GCEPDRASYNIMVDAYGRAGL 333
G PD +N+++ AY + G+
Sbjct: 355 DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ + KA+ L++++ P + ++ C G + A+ +F
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISI 525
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ +VYN+ +DG G + A+ +F M QP+ Y ++N Y K +
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L LF E+ KP+ Y +++ + G A+ F ++ +GI D Y Y+ ++
Sbjct: 586 LSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMV 325
EA L +H M + D + NIM+
Sbjct: 646 LFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ YC+ G +E A VF M G+ P+ VVY + ++G K G + + +
Sbjct: 529 PNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSL 588
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ + +PST Y ++++ +A ++ A F+EM + TY+ ++ +
Sbjct: 589 FREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFK 648
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
+EA +F++L ++ D+ N ++ I R+ G P +
Sbjct: 649 NSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVT 708
Query: 321 YNIMVDAYGRAGLHE 335
Y+IM+ + GL E
Sbjct: 709 YSIMMTNLIKEGLVE 723
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ YC G +++ ++FRE+ G+ PS +YN + GL + G A
Sbjct: 564 PNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK 623
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M TY++++ K S S A+ LF E+ + K +I T ++ +
Sbjct: 624 FHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQ 683
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
EEA+++F + +G+ P V Y+ +M EA + S M + GCE
Sbjct: 684 IRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 205 PQKAVEIFQRMKRD----CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
P AV +F R+ R P+ TY ++++ +A + + L F ++ K +
Sbjct: 85 PALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQV----LKTGLG 140
Query: 261 TYTALVNAFAREGLCE-----EAEEIF-EQLQGAGIEPDVYAYNALM------------- 301
T +++ R GLCE EA +I ++ G PDV++Y ++
Sbjct: 141 IDTIMISNLLR-GLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQAD 199
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
E R+++ C P+ +YN ++D + + G
Sbjct: 200 ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEG 230
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + E+ +S TY+++L + ++A +F+E+ + N I
Sbjct: 620 AKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIA 679
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC-K 256
G+ + ++A ++F + R PS TY++M+ K A +F+ M + C +
Sbjct: 680 GMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQ 739
Query: 257 PNICTYTALVNAFAREGLCEEAEEI 281
PN + L+N RE L E EI
Sbjct: 740 PN----SQLLNHVVRELL--EKREI 758
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AY + ++A F + + SR IP T TY+ L+ GL++ A + EMRK
Sbjct: 588 LIRAYCENGNMREA-FRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKE 646
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ V Y + I G K G K I Q M + P+ TYT+MIN + K A
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAA 706
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KL NEM P+ TY AL N F +EG EEA ++ + + GI D Y L++
Sbjct: 707 AKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Query: 304 YR 305
+
Sbjct: 767 WH 768
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ Y + + ++ E + E++ + Y L++AYC +G + +A + +MR
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+P ++ Y+S I GL G A ++ M+++ P+ YT +I Y K +
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ EM + PN TYT ++N + G + A ++ ++ GI PD YNAL
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNG 731
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
EA ++ M G D +Y ++D + +
Sbjct: 732 FCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +LL C G +E+A ++ E +K G P A Y IDG K ++ ++
Sbjct: 510 PDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKL 569
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ M + + Y +I Y + A +L ++MRS TY++L++ +
Sbjct: 570 FQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSN 629
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
GL + A ++ ++++ G+ P+V Y AL+ Y + +MH P++ +
Sbjct: 630 IGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKIT 689
Query: 321 YNIMVDAYGRAG 332
Y IM++ + + G
Sbjct: 690 YTIMINGHCKLG 701
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 149 RCIPTEDTY--ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
C T D Y + ++ A+C G ++ A +FR+M K G+ P+ V YN+ I GL K G
Sbjct: 190 HCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLD 249
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + ++M+++ +PS TY ++IN K + A + EM PN Y L+
Sbjct: 250 EAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLI 309
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + R G A +I + + GI P+ N+L++ Y
Sbjct: 310 DGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGY 347
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ YC + +E+ E +F+EM + +AVVY + I + GN ++A +
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ ++ TY+ +I+ A +L +EMR PN+ YTAL+ + +
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G + + I +++ + P+ Y ++ + +L++ M G PD +
Sbjct: 665 LGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVT 724
Query: 321 YNIMVDAYGRAGLHE 335
YN + + + + G E
Sbjct: 725 YNALTNGFCKEGKME 739
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 12/250 (4%)
Query: 100 INVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL 159
I+ ++Q+R + + I S LI+ Y + + + AE E+L + + T+
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ C+ + A EM P+ + + GL + G +A+E++ R+
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+T T +I+ +A A KL EM + +Y L+ A +EG EE
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAY 328
++ E++ GI+PD+Y YN L+ + ++ G PD +Y IM+D Y
Sbjct: 498 KLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGY 557
Query: 329 GRAG-LHEGK 337
+A + EG+
Sbjct: 558 CKANRVEEGE 567
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 15/238 (6%)
Query: 112 WDPIVLMSCVSILLIEAYGQ--KSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSG 168
++P V ++ V LLI Y K L F LL ++ + P+ T LL + +
Sbjct: 118 FEPAVAVTVVD-LLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKAN 176
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
++ + VF M G+ P ++++ ++ GG A+E+F++M++ P+ TY
Sbjct: 177 EVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYN 236
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ K + A + +M + KP++ TY L+N + +EA I +++
Sbjct: 237 NIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDR 296
Query: 289 GIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
G P+ YN L++ Y I + G P+ + N ++ Y ++ E
Sbjct: 297 GYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQME 354
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+ Q +A + LL+ T L+ C +G E+A + +EM +
Sbjct: 412 LLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER 471
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL ++ YN+ I K G ++ ++ + M R QP TY ++++ K A
Sbjct: 472 GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L++E + + P+ TY +++ + + EE E++F+++ IE + Y L+
Sbjct: 532 GGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRA 591
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
EA+RL M G A+Y+ ++ GL
Sbjct: 592 YCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 91/230 (39%), Gaps = 46/230 (20%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P+ TY +L+ ++A + +EM G P+ VVYN+ IDG + GN A
Sbjct: 262 RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTA 321
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH--------------- 253
++I M + P++ T +I Y K+++ A L EM +
Sbjct: 322 LQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHR 381
Query: 254 ---KC-----------------KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
KC KPN T LV+ + G EA E++ +L G +
Sbjct: 382 LCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAAN 441
Query: 294 VYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
NAL+ EA +L+ M G D SYN ++ A + G
Sbjct: 442 TVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ C +G L++A +M K + PS V Y I+GL+K +A I
Sbjct: 230 PNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCI 289
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P+ Y +I+ Y + AL++ ++M S+ PN T +L+ + +
Sbjct: 290 LKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCK 349
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIM 324
E AE + E++ G + + + +I R+ + C D A IM
Sbjct: 350 SNQMEHAEHLLEEMLTGGGVINQGTFTS------VIHRLCLKCRFDSALLFIM 396
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ C +G +E A VF EM + GL P V YN+ + G K G +++ +
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + P T+T +I+ KA A+ L +MR + N T+TAL++ F +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G ++A E+++ GI+P V YNAL+ Y + RM + E PD +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 321 YNIMVDAYGRAG 332
Y+ ++ Y + G
Sbjct: 401 YSTIISGYCKVG 412
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + ++ + E+ +P T+ L+ A C +G LE+A A+ +MR+ G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + V + + IDG K G A+ + M++ QPS Y +IN Y K + +A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L EM + + KP++ TY+ +++ + + G + A ++ +++ G+ PD Y++L+
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A L M +G +PD +Y ++D + + G
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E++ P +Y LL YC G L ++ AVF EM + GL P V + S I
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKC 255
K GN ++AV + +M+ + + T+T +I+ G K F+ AL EMR
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID--GFCKKGFLDDALLAVEEMRKCGI 359
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+P++ Y AL+N + + G + A E+ +++ ++PDV Y+ ++ Y
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 12/194 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L++A C G LE+A V +MR G P+AV YN+ + + G A +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 212 FQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
M+ + +P+ T+ M+N KA + A K+F+EM P++ +Y L++ +
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ G E+ +F ++ G+ PDV + +L+ +A L+++M G +
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 320 SYNIMVDAYGRAGL 333
++ ++D + + G
Sbjct: 330 TFTALIDGFCKKGF 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + +K A E+ P+ Y L+ YC G ++ A + REM
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y++ I G K GN A ++ Q+M + P TY+ +I + + A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF M +P+ TYT L++ +EG E+A + +++ G+ PDV Y+ L+
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMV 325
EA+RL+ ++ H PD Y+ ++
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L A M ++G+ P+ YN + L G ++AV + M+ C P+ TY
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192
Query: 230 MINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++ + +A + A ++ + MR KPN+ T+ ++VN + G E A ++F+++
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 289 GIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
G+ PDV +YN L+ Y + +H G PD ++ ++ A +AG
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 109 NKKWDPIVLMSCVS-------ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
N K+D LM C S + L++ + K L K+A+ Y +LD Y++L+
Sbjct: 538 NIKYD--ALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 595
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
+C G + KA + ++M + G P++ S + GL + G +A Q + C
Sbjct: 596 HGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPL 655
Query: 222 PSTETYTLMINLYGK 236
E +I+L K
Sbjct: 656 ADAEASKALIDLNRK 670
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 72/204 (35%), Gaps = 50/204 (24%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY L+ +C G +EKA ++ EM + G+ P V Y+ I+GL K ++A +
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 212 FQRMKRD--------------CCQPST--------------------------------- 224
++ + CC +
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585
Query: 225 ---ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
Y+++I+ + + AL +M PN + +LV EG+ EA+
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645
Query: 282 FEQLQGAGIEPDVYAYNALMEAYR 305
+ L D A AL++ R
Sbjct: 646 IQDLLTCCPLADAEASKALIDLNR 669
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 25/115 (21%)
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
PS Y ++ AS A + + M H PN+ TY LV A G EEA +
Sbjct: 116 PSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
++GAG C P+ +YN +V A+ RAG +G
Sbjct: 175 VGDMRGAG------------------------CAPNAVTYNTLVAAFCRAGELDG 205
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +K L + A ++ C P +Y LL A+C ++KA A M
Sbjct: 102 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 161
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ + L + G AVE+ ++K C P +Y +I+ KA K+ A
Sbjct: 162 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 221
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+L NEM S +P+I TY+ + RE E+A F ++Q GI P+ YNA++
Sbjct: 222 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 281
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A L + M GC P+ ++Y I+++ GL
Sbjct: 282 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 322
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
A C ++A + EMR G P V YN ++G+ + G A+E + + C+P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+T +Y +++ A + A +L EM C PN+ T+ L++ R+GL E A E+
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
EQ+ G P+ +YN L+ A+ +M GC PD SYN ++ A R+
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 332 G 332
G
Sbjct: 181 G 181
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++LK C + E AE + EM + G PP+ V +N I L + G + A+
Sbjct: 58 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 117
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ +++ + C P++ +Y +++ + K K A+ + M S C P+I +Y L+ A
Sbjct: 118 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 177
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
R G + A E+ QL+ G P + +YN ++ EA L++ M G +PD
Sbjct: 178 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237
Query: 319 ASYNIMVDAYGR 330
+Y+ + R
Sbjct: 238 ITYSTIAAGLCR 249
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
A ++S +K+A E+ D C P TY +++ C G ++ A + + YG P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ V YN + GL + A E+ M + C P+ T+ ++I+ + AL++
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
++ + C PN +Y L++AF ++ ++A + + G PD+ +YN L+ A
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 305 ----RLISRMHM----GCEPDRASYNIMVDAYGRAG 332
+ +H GC P SYN ++D +AG
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE E+ C P T+ +L+ C GL+E A V ++ KYG P+++ YN
Sbjct: 79 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 138
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ K KA+ M C P +Y ++ ++ + +A++L ++++ C
Sbjct: 139 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 198
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P + +Y +++ + G +EA E+ ++ G++PD+ Y+ + +A R
Sbjct: 199 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 258
Query: 306 LISRMH-MGCEPDRASYNIMV 325
++ MG P+ YN ++
Sbjct: 259 AFGKVQDMGIRPNTVLYNAII 279
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ A+ ++ KA +L+L+ SR C P +Y LL A C SG ++ A + +++
Sbjct: 138 LLHAFCKQKKMDKA-MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 196
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM------------- 230
G P + YN+ IDGL K G ++A+E+ M QP TY+ +
Sbjct: 197 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 256
Query: 231 INLYGKAS----------------------KSFMALKLFNEMRSHKCKPNICTYTALVNA 268
I +GK ++ A+ LF M + C PN TYT L+
Sbjct: 257 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 316
Query: 269 FAREGLCEEAEEIFEQLQGAGI 290
A EGL +EA ++ ++L G+
Sbjct: 317 LAYEGLIKEARDLLDELCSRGV 338
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 124 LLIEAYGQKSL----HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
L +E Q++L H A+ Y C P +Y ++ + G ++KA +F E
Sbjct: 172 LCVEKKSQEALELLIHMTADGGY------NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHE 225
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M GLPP V YNS IDGL K KAV I Q M P T TY +MI Y +
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQ 285
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A++L +M +P++ TY+ L+ + + G C EA +F+ + G +P+ Y+
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345
Query: 300 LMEAYR-----------LISRMHMGCEPDRASYNIMVDAYGRAG 332
L+ Y L + G + ++NI++ AY + G
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG------------- 198
P TY+LL++ YC G +A +VF M + G P++ +Y+ + G
Sbjct: 303 PDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 362
Query: 199 ---LLKGGNP-------------------QKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+++ G P KA+ F M+++ +P +Y+ +I++ K
Sbjct: 363 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 422
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ A+ FN+M S PNI ++T+L++ G ++ EE+ ++ GI PD
Sbjct: 423 TGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 482
Query: 297 YNALMEAY----RLISR-------MHMGCEPDRASYNIMVDAYGRAG 332
N +M+ R++ +H+G +PD SYN ++D Y G
Sbjct: 483 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 156 TYALLLKAYCMSGLLEKA-EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
T L+K C + A + VFR M + G P YN+ I GL Q+A+E+
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 215 MKRDC---CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M D C P+ +Y +I+ + K + A LF+EM P++ TY +L++ +
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
++A I + + G+ PD YN ++ EA RL+ +M G +PD +
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307
Query: 321 YNIMVDAYGRAG 332
Y++++ Y + G
Sbjct: 308 YSLLIQYYCKIG 319
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL Y +G +E A A++REM + + A+ N + GL + G A E+
Sbjct: 548 PDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAAREL 607
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ +M Q ETY ++ + S AL++F ++RS + + ++ T++ ++NA +
Sbjct: 608 YMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLK 667
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G +EA+ +F + G PDV Y+ +++++ +S GC D
Sbjct: 668 VGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHM 727
Query: 321 YNIMV 325
NI+V
Sbjct: 728 LNIIV 732
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ YC G ++++ M GL P + YNS ++G K G + A+ +
Sbjct: 513 PDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALAL 572
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M R + T +M++ +A + A +L+ +M + I TY ++
Sbjct: 573 YREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCE 632
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAY----NALM------EAYRLISRMHM-GCEPDRAS 320
+EA +FE L+ E DV + NAL+ EA L S M + G PD +
Sbjct: 633 NSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVIT 692
Query: 321 YNIMVDAYGRAGLHE 335
Y++M+ ++ GL E
Sbjct: 693 YSLMIKSHIEEGLLE 707
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY + KA + E+ + P +Y+ ++ C +G +E A F +M
Sbjct: 380 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE 439
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ + + S I GL G +K E+ F+ + R + T+M NL K +
Sbjct: 440 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC-KEGRVVE 498
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A F+ + KP++ +Y L++ + G +E+ + +++ G+ PD + YN+L+
Sbjct: 499 AQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLN 558
Query: 303 AY 304
Y
Sbjct: 559 GY 560
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 4/193 (2%)
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
H D + ++R N +V S V I + + A + + +++ P
Sbjct: 388 HGAVDKAMTAFTEMRQNGLRPDVVSYSTV----IHILCKTGRVEDAVYHFNQMVSEGLSP 443
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
++ L+ C G +K E + EM G+ P A+ N+ +D L K G +A + F
Sbjct: 444 NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 503
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ +P +Y +I+ Y K ++K + M S +P+ TY +L+N + +
Sbjct: 504 DMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563
Query: 273 GLCEEAEEIFEQL 285
G E+A ++ ++
Sbjct: 564 GRVEDALALYREM 576
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 35/160 (21%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y++++D +TY +L C + +++A +F ++R ++ I+ LLK
Sbjct: 608 YMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLK 667
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A +F M P TY+LMI +SH
Sbjct: 668 VGRIDEAKSLFSAMVLRGPVPDVITYSLMI-------------------KSH-------- 700
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
EGL EE++ +F ++ G D + N ++
Sbjct: 701 --------IEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY+L++K++ GLLE+++ +F M K G + + N + LL+ G+ ++A
Sbjct: 687 VPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGT 746
Query: 211 IFQRMKRDCCQPSTETYTLMI 231
++ T L+I
Sbjct: 747 YLTKIDEKNFSLEASTAALLI 767
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T + ++ A C GL+++A A F +++ G P V YN+ + K GN +A+ +
Sbjct: 242 PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRV 301
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M++D CQP TY + Y +A A K + M S PN TY ++ A+
Sbjct: 302 LKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGN 361
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----EAYRLISRMHM-------GCEPDRAS 320
G +EA +F+Q++ +G P+V YN ++ + R + M GC P+R +
Sbjct: 362 IGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVT 421
Query: 321 YNIMVDAYGRAGLHE 335
+N M+ G+ G+ +
Sbjct: 422 WNTMLAVCGKRGMED 436
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 21/198 (10%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV----YNSYIDGLLKGGNPQKAVEIFQR 214
++++A G + A+ EM LPP + + Y + + L + G ++AVE+F
Sbjct: 142 MVVRALGREGQHDAVCALLDEMP---LPPGSRLDVRAYTTVLHALSRAGRYERAVELFAE 198
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
++R P+ TY +++++YG+ +S+ + L +EMR+ +P+ T + ++ A R+G
Sbjct: 199 LRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDG 258
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYN 322
L +EA FE L+ G P V YNAL+ EA R++ M GC+PD +YN
Sbjct: 259 LVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYN 318
Query: 323 IMVDAYGRAGLHE--GKC 338
+ Y RAG +E KC
Sbjct: 319 ELAGTYARAGFYEEAAKC 336
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 15/190 (7%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G +EKA F+E++ G P V++NS + K G K EIF +K+ P TY
Sbjct: 576 GGIEKA---FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITY 632
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
++++Y K S+S+ A K+ N+++S + KP++ +Y ++N F ++GL +EA+ I ++
Sbjct: 633 NSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 692
Query: 288 AGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
G+ P V Y+ L+ EA +I+ M +P +Y +VD+Y +A E
Sbjct: 693 DGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEE 752
Query: 337 KCSYSLVELS 346
S+ L E+S
Sbjct: 753 ARSF-LSEVS 761
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL-LEKAEAVFREMRKY 183
++ A + +++A + EL PT TY ++L Y G + A+ EMR
Sbjct: 179 VLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAA 238
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P ++ I + G +AV F+ +K P TY ++ ++GKA A
Sbjct: 239 GVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEA 298
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ EM C+P+ TY L +AR G EEA + + + G+ P+ + YN +M A
Sbjct: 299 LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTA 358
Query: 304 YRLISRM-----------HMGCEPDRASYNIMVDAYGR 330
Y I ++ GC P+ +YN ++ G+
Sbjct: 359 YGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGK 396
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ +G+ + +A E+ C P TY L Y +G E+A M G
Sbjct: 285 LLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKG 344
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+A YN+ + G +A+ +F +MK+ C P+ TY ++ + GK S+ + L
Sbjct: 345 LLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVML 404
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM C PN T+ ++ + G+ + + E ++ G+E YN L+ AY
Sbjct: 405 EMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAY 464
Query: 305 -RLISRMH----------MGCEPDRASYNIMVDAYGRAG 332
R SR + G P +YN +++ R G
Sbjct: 465 GRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQG 503
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ AYG +A + ++ S C+P +TY +L + EM + G
Sbjct: 355 VMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSG 414
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V +N+ + K G + + MK + S +TY +I YG+ A
Sbjct: 415 CTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAF 474
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K++NEM S P + TY AL+N +R+G A+ I +++ G +P+ +Y+ L++ Y
Sbjct: 475 KMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCY 534
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AYG+ A Y E+ + P TY LL G A+++ +MR G
Sbjct: 460 LIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKG 519
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ Y+ + KGGN I + + PS ++ K +
Sbjct: 520 FKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIE 579
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K F E+++ P++ + ++++ +A+ G+ + EIF+ ++ +G+ PD+ YN+LM+ Y
Sbjct: 580 KAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMY 639
Query: 305 ----------RLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
++++++ +PD SYN +++ + + GL
Sbjct: 640 AKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGL 679
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+L Y +G+ K +F +++ GL P + YNS +D K +A +I ++K
Sbjct: 600 MLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQ 659
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P +Y +IN + K A ++ +EM + P + TY LV +A + EA
Sbjct: 660 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAR 719
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAY 304
E+ + ++P Y ++++Y
Sbjct: 720 EVINYMIQHNLKPMELTYRRVVDSY 744
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 16/217 (7%)
Query: 134 LHKKAEFTYL-----ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L KK+ FT + E+ S C P T+ +L G+ + V M+ G+ S
Sbjct: 394 LGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELS 453
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
YN+ I + G+ A +++ M P TY ++N+ + A + +
Sbjct: 454 RDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVS 513
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+MR+ KPN +Y+ L+ +A+ G + I +++ G + P L+ A
Sbjct: 514 KMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCR 573
Query: 309 RM-----------HMGCEPDRASYNIMVDAYGRAGLH 334
R+ G PD +N M+ Y + G++
Sbjct: 574 RLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMY 610
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ Y + ++ K + + S P TY L+ Y +AE + +++
Sbjct: 600 MLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQ 659
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ I+G K G ++A I M D P TY ++ Y A
Sbjct: 660 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAR 719
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
++ N M H KP TY +V+++ + EEA ++
Sbjct: 720 EVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEV 760
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY + ++ C +G L +A + MR Y +P V YN+ I GL K PQ+A+ +RM
Sbjct: 226 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRM 284
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C P TY +I+ Y K S A +L + P+ TY +L+N EG
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIM 324
E A E+F + Q GI+PD+ YN+L + A ++++ M GC PD +YNI+
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404
Query: 325 VDAYGRAG 332
++ + G
Sbjct: 405 INGLCKMG 412
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +KS+ ++A +++ C+P + TY ++ YC ++++A + ++ G
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S I+GL G+ ++A+E+F + +P Y ++ AL
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ NEM C P+I TY ++N + G +A + G PDV+ +N L++ Y
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ RM G PD +YN +++ +AG
Sbjct: 444 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 482
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 12/233 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + S+ ++A + + +P + TY L+ C G +E+A +F E + G
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P VVYNS + GL G A+++ M + C P +TY ++IN K A
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ N+ P++ T+ L++ + + + A ++ E++ GI PD YN+++
Sbjct: 419 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 478
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELS 346
E M + GC P+ +YNI+++ + R+ E + S +V++S
Sbjct: 479 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME-EASKVIVKMS 530
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T+ L+ YC L+ A + M +YG+ P + YNS ++GL K G + E
Sbjct: 430 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 489
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
FQ M C P+ TY ++I + +++K A K+ +M P+ ++ L+ F
Sbjct: 490 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
R G E A +F++L+ G +N L+ A+ MHM G D
Sbjct: 550 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 609
Query: 320 SYNIMVDA 327
+Y +++D
Sbjct: 610 TYRVLIDG 617
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 12/203 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + C P TY +++ C G + A V + G P +N+ IDG K
Sbjct: 388 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 447
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+++ +RM P T TY ++N KA K + F EM C PN TY
Sbjct: 448 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYN 507
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ F R EEA ++ ++ G+ PD ++N L+ AY L ++
Sbjct: 508 ILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567
Query: 313 GCEPDRASYNIMVDAY-GRAGLH 334
G ++N ++ A+ G+ +H
Sbjct: 568 GYSATADTFNTLIGAFSGKLNMH 590
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L++ C + ++A R M G P YN+ IDG K Q+A E
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 314
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + P TY +IN AL+LFNE ++ KP+I Y +LV
Sbjct: 315 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRA 319
+GL A ++ ++ G PD+ YN ++ +A +++ M G PD
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434
Query: 320 SYNIMVDAY 328
++N ++D Y
Sbjct: 435 TFNTLIDGY 443
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 83/170 (48%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
T+ E++ C P TY +L++ +C S +E+A V +M + GL P AV +N+ I G
Sbjct: 490 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G+ + A +FQ+++ + +T+ +I + MA K+F+EM S + +
Sbjct: 550 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY 609
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
TY L++ + + A ++ G P + + ++ + + R+
Sbjct: 610 TYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 659
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++AY +G L A F M + PP+A YN+ +D L+ +A +++ RM
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T+T+ + + ++ +AL+L + H+ CT +V G
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL-PHRGAVAYCT---VVCGLYAHGHTH 171
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEA 303
+A ++F+Q+ + P++ A+N ++ A
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHA 198
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 108 LNKKWDPIVLMSC-----VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
+N+ + ++L C +LIE + + + ++A +++ P ++ L+
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
+C +G LE A +F+++ + G +A +N+ I N A +IF M +
Sbjct: 547 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 606
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+ TY ++I+ K + A EM P++ T+ ++N+ +A I
Sbjct: 607 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 666
Query: 283 EQLQGAGIEPDV 294
+ G+ P+V
Sbjct: 667 HIMVKIGVVPEV 678
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%)
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y I Y +A + A+ F M C P Y A+++A ++A +++ ++
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 287 GAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA 319
AG+ PD++ + + ++ L +R H+ RA
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRA 148
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 185 LPPSAV--VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P+ + +Y + I + G + AV+ F+RM C P+ Y +++ A+
Sbjct: 47 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG------IEPDVYA 296
A K++ M + P++ T+T + +F A + L G + +YA
Sbjct: 107 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYA 166
Query: 297 YNALMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ +A +L +M H P+ A++N ++ A + G
Sbjct: 167 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 203
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P++ TY +L A+ G +EKA + M K GL P +Y + GL GN ++A ++
Sbjct: 346 PSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKL 405
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M +P+ Y MIN Y KA SF AL+ EM + PN+ +Y++ + +
Sbjct: 406 FRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCK 465
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+G +EAE + +++G+G+EP V YN + +A
Sbjct: 466 DGKWQEAEILLNKMRGSGLEPSVSIYNIISKA 497
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++K C +G+ K + ++ K GL P+ V+Y + IDG K G+ ++A +F +M
Sbjct: 154 TYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKM 213
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ TYT++IN + K +LF +M+ PN+ TY ++N F EG
Sbjct: 214 GEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKL 273
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--------------- 310
+A E+F+++ G+ +V YN L+ EA +L+ +M
Sbjct: 274 HKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVT 333
Query: 311 -------HMGCEPDRASYNIMVDAYGRAG 332
G P + +Y I+ +A+ R G
Sbjct: 334 DLVREMEERGISPSKVTYTILTNAHVRLG 362
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 32/229 (13%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++A+ + ++ + + + TY +L+ + GL + +F +M+ G+ P+ YN
Sbjct: 204 RRAKLLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCM 263
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN------- 248
I+ G KA E+F M + + TY +I+ + ++ + A KL +
Sbjct: 264 INEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGY 323
Query: 249 --------------EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
EM P+ TYT L NA R G E+A + ++ G+ PDV
Sbjct: 324 SNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDV 383
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ Y L+ EA +L M M EP+ YN M++ Y +AG
Sbjct: 384 HIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAG 432
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +K L K + ++ P TY ++ +C G L KA +F EM K
Sbjct: 227 VLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKR 286
Query: 184 GLPPSAVVYNSYIDGLLK---------------------GGNPQKAVEIFQRMKRDCCQP 222
G+ + V YN+ I GL + GGN ++ + M+ P
Sbjct: 287 GVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISP 346
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
S TYT++ N + + A ++ M P++ Y L++ +G +EA ++F
Sbjct: 347 SKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLF 406
Query: 283 EQLQGAGIEPDVYAYNALMEAY 304
+ +EP+ YN ++ Y
Sbjct: 407 RSMAEMKLEPNEVVYNTMINGY 428
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y +LL C+ G +++A +FR M + L P+ VVYN+ I+G K GN +A+
Sbjct: 380 VPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALR 439
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ M+ P+ +Y+ I + K K A L N+MR +P++ Y + A
Sbjct: 440 FLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYNIISKA 497
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y+E+LD+ + +L+ +C G + A+ VF E+ K L P+ V +N+ I+G K
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN + + +M++ +P TY+ +IN K +K A LF+EM PN
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM- 310
+T L++ +R G + +E ++++ G++PD+ YN L+ + ++ M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G PD+ +Y ++D + R G
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGG 429
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
SR P TY+ L+ A C ++ A +F EM K GL P+ V++ + I G + G
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
E +Q+M QP Y ++N + K A + + M +P+ TYT L++
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEP 316
F R G E A EI +++ GIE D ++AL ++A R + M G +P
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 317 DRASYNIMVDAYGRAG 332
D +Y +M+DA+ + G
Sbjct: 484 DDVTYTMMMDAFCKKG 499
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ +C G +E A + +EM + G+ V +++ + G+ K G A
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M R +P TYT+M++ + K + KL EM+S P++ TY L+N +
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHMGCEPDRASYNI 323
G + A+ + + + G+ PD YN L+E + R I + +G D ASY
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKS 592
Query: 324 MVDAYGRA 331
+V+ RA
Sbjct: 593 IVNELDRA 600
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 31/316 (9%)
Query: 45 GKGWKYGSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFD-----SLPPTHATWDDL 99
G W + +D FP+ ++ +E + + FD SL PT +++ L
Sbjct: 222 GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 100 IN-------VSVQLRLNKKWD-----PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
IN + RL + + P V LI A +++ A + E+
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA---LINALCKENKMDGAHGLFDEMCK 338
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
IP + + L+ + +G ++ + +++M GL P V+YN+ ++G K G+
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A I M R +P TYT +I+ + + AL++ EM + + + ++ALV
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRMHM-GCEP 316
+EG +AE ++ AGI+PD Y +M+A ++L+ M G P
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 317 DRASYNIMVDAYGRAG 332
+YN++++ + G
Sbjct: 519 SVVTYNVLLNGLCKLG 534
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+Y ++L P Y L+ +C +G L A + M + GL P + Y + IDG
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+GG+ + A+EI + M ++ + ++ ++ K + A + EM KP+
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM---------- 310
TYT +++AF ++G + ++ +++Q G P V YN L+ + +M
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 311 -HMGCEPDRASYNIMVDAYGR 330
++G PD +YN +++ + R
Sbjct: 547 LNIGVVPDDITYNTLLEGHHR 567
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE E+L + P + TY +++ A+C G + + +EM+ G PS V YN ++
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K G + A + M P TY ++ + + + S K + +
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS---KRYIQKPEIGIVA 585
Query: 258 NICTYTALVNAFAR 271
++ +Y ++VN R
Sbjct: 586 DLASYKSIVNELDR 599
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++EA+G+ K+ Y L + P T+ ++ A+ +G LE+A +++R+MR+ G
Sbjct: 711 VLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAG 770
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V+ + + + A E+ + +K+ + + Y MI+LY K A
Sbjct: 771 FSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAA 830
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M+ C P+ T+ L+ ++R + +EA+ + ++ G P++ Y L+ AY
Sbjct: 831 LVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAY 890
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLH 334
+ S GC+PD +YN+M++ Y +AG H
Sbjct: 891 GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEH 931
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 14/226 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A + A + E+ C P TY ++ Y +G +E A ++FR M++ G
Sbjct: 191 LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 250
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMA 243
P AV YNS + + G ++ VE + M RD C TY MI++YGKA A
Sbjct: 251 FTPDAVTYNSVLHAFARDGRIEE-VERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKA 309
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L+ +M+ P+ T+T L++ + G EA +FE + + + P + A++A++ A
Sbjct: 310 EELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICA 369
Query: 304 YRLIS-----------RMHMGCEPDRASYNIMVDAYGRAGLHEGKC 338
Y + G PD +Y++M+D + +A + E KC
Sbjct: 370 YAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPE-KC 414
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 119 SCVSIL--LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK-AEA 175
+CV + L+ Y + + + D C P T+ +++KA G+ E A +
Sbjct: 112 NCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASS 171
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+ +++ GL P + YN+ I A+ IF+ M+R C P TY MI++YG
Sbjct: 172 LLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYG 231
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+A + A +F M+ P+ TY ++++AFAR+G EE E I ++ A D
Sbjct: 232 RAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEI 291
Query: 296 AYNALMEAYRLISRMHMGCE------------PDRASYNIMVDAYGRAGL 333
YN ++ Y + MH E PD ++ +++D G+AG
Sbjct: 292 TYNTMIHMYGK-AGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGF 340
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + + +I +YG+ L + AE + +L Y+ LL AY +G E+A
Sbjct: 635 SAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALD 694
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
M GL P+A N ++ + G ++ E +QR+ P++ T+ ++ + + +
Sbjct: 695 NMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNG 754
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A ++ +MR P+I + AL+ ++RE + +AEE+ + ++ AG+E D+ YN
Sbjct: 755 NLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYN 814
Query: 299 ALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGR 330
++ Y + +GC PD ++N ++ Y R
Sbjct: 815 HMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSR 857
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 92/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + ++KA + + + C P T+ L+ Y + ++++A+A+ REM K G
Sbjct: 816 MISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 875
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ Y + I + + A +F+ + C+P Y +MIN+Y KA +
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 935
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +M++ +P++ T L++++ + G +AEE+ E L G+ PD Y +++ ++
Sbjct: 936 EVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSH 995
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 84/158 (53%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D+RC E TY ++ Y +G+ KAE ++ +M++ G P +V + ID L K G
Sbjct: 283 DARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVN 342
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A +F+ M + +P+ + ++ MI Y KA A ++ M +P++ Y+ ++
Sbjct: 343 EAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVML 402
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F + + E+ +++ + G+G++P++ Y ++ +
Sbjct: 403 DVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVF 440
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ ++ +Y L + AE VFR+++++G + Y++ + + GN ++A M
Sbjct: 638 HVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMV 697
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP+ ++ +G+A K+ + + + PN T+ + +AF+R G E
Sbjct: 698 AAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLE 757
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMV 325
EA ++ Q++ AG P + + AL+ Y L+ + G E D YN M+
Sbjct: 758 EARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMI 817
Query: 326 DAYGRAG 332
Y + G
Sbjct: 818 SLYSKLG 824
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 199 LLKGGNPQKAVEIFQRMKR---DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
L + P A E+F R + +C Q Y ++++Y + +L M+ C
Sbjct: 90 LGRANQPGLAQELFDRAESSIGNCVQ----VYNSLMSVYARHGDWNSVQQLLCRMQDRGC 145
Query: 256 KPNICTYTALVNAFAREGLCEE-AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM---- 310
+P++ T+ ++ A R G+ E A + + + AG+ PD YN L+ A L +R+
Sbjct: 146 RPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAI 205
Query: 311 -------HMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
GC+PD +YN M+ YGRAG E S
Sbjct: 206 LIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 241
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I YG+ +H+KAE Y+++ + P T+ +L+ +G + +A A+F +M K
Sbjct: 296 MIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQ 355
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +++ I K A + M R +P Y++M++++ KA +
Sbjct: 356 VRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCI 415
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
L+ M KP + Y +V F ++ E E + +++
Sbjct: 416 ILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEM 456
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 30/208 (14%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AYG+ ++ AE + + ++ C P Y +++ Y +G K E V +M+ G
Sbjct: 886 LISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADG 945
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS + +D KGG KA E+ + + P YT +IN + A+
Sbjct: 946 FEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAV 1005
Query: 245 KLFNEMRSHKCKPNICTYT----------------ALVNAFAREG--------------L 274
+M +P T T L+ A + G +
Sbjct: 1006 IWLRKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKALSEAGFSLPLRLMTECTPKV 1065
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALME 302
++ ++IF+QLQ +G E N LM+
Sbjct: 1066 VQDMQDIFDQLQESGPEACQGVVNVLMD 1093
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
PN +++ R A+E+F++ + + I V YN+LM Y +L
Sbjct: 78 PNPRMLAVMLSVLGRANQPGLAQELFDRAESS-IGNCVQVYNSLMSVYARHGDWNSVQQL 136
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
+ RM GC PD ++NI++ A R G+ EG S L ++
Sbjct: 137 LCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDV 176
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ MH G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTY 262
A+EI+++M P TY +I YG K + A L +EM KP+ TY
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLI--YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 320
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
T L++ +EG + A E +++ I D AY AL+ +A +++ M
Sbjct: 321 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD +Y ++++ + + G
Sbjct: 381 VGLKPDTGTYTMIINEFCKKG 401
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C P TY L+ +Y + L +A +VF M++ G P V Y + ID K G
Sbjct: 413 EMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAG 472
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ ++Q+M+ P T TY+++IN GKA A KLF EM C PN+ TY
Sbjct: 473 FLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYN 532
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
++ A+ A E++ +Q AG +PD Y+ +M EA + + M
Sbjct: 533 IMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRK 592
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y ++VD +G+ G
Sbjct: 593 NWVPDEPVYGLLVDLWGKVG 612
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + + ++ C P TY L+ + +G L+ A ++++M++
Sbjct: 429 LIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAH 488
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K G+ A ++F M C P+ TY +MI L KA AL
Sbjct: 489 LSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTAL 548
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ +M++ +P+ TY+ ++ G EEAE IF +++ PD Y L++ +
Sbjct: 549 ELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLW 608
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
+ + ++ G P+ + N ++ A+ R +H +Y+L++
Sbjct: 609 GKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLR--VHRLSDAYNLLQ 657
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
R+ G Y + + L + ++ M RD CQP+ TY +I+ YG+A+
Sbjct: 380 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 439
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA- 299
A+ +F+ M+ C+P+ TY L++ A+ G + A +++++Q A + PD + Y+
Sbjct: 440 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 499
Query: 300 ---------LMEAYRLISRM-HMGCEPDRASYNIMVDAYGR----------------AGL 333
L A++L M GC P+ +YNIM+ + AG
Sbjct: 500 INCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGF 559
Query: 334 HEGKCSYSLVELSVKH 349
K +YS+V + H
Sbjct: 560 QPDKVTYSIVMEVLGH 575
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++ ++ P TY++++ +G L A +F EM G
Sbjct: 464 LIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQG 523
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN I K N A+E+++ M+ QP TY++++ + G A
Sbjct: 524 CVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAE 583
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F EM+ P+ Y LV+ + + G E++ E ++ + AG+ P+V N+L+ A+
Sbjct: 584 AIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAF 643
Query: 305 RLISR-----------MHMGCEPDRASYNIMV 325
+ R + +G +P +Y +++
Sbjct: 644 LRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL 675
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C+P TY +++ + A ++R+M+
Sbjct: 498 VIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNA 557
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G+ ++A IF MKR P Y L+++L+GK +
Sbjct: 558 GFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKS 617
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + M + PN+ T +L++AF R +A + + + G++P + Y L+
Sbjct: 618 WEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL 675
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++ ++ P + TY+++++ G LE+AEA+F EM++ P VY +D K
Sbjct: 551 YRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGK 610
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN +K+ E +Q M P+ T +++ + + + A L M +P++ T
Sbjct: 611 VGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQT 670
Query: 262 YTALVNAFAREGLCEEAEEIFE 283
YT L++ C EA F+
Sbjct: 671 YTLLLSC------CTEARSSFD 686
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G ++AE + E+ +P E Y LL+ + G +EK+ ++ M
Sbjct: 568 IVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNA 627
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
GL P+ NS + L+ A + Q M R QPS +TYTL+++ +A SF
Sbjct: 628 GLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSF 685
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++L +C+ K V +EM + G+ P+ YN+ + G + G + A E F M
Sbjct: 191 TYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 250
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+ TYT +++ +G A + A +F+EM P++ TY A++ ++
Sbjct: 251 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 310
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
E A +FE++ G EP+V YN L+ L+ RM + GCEP+ +YN+M
Sbjct: 311 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 370
Query: 325 VDAY 328
+ Y
Sbjct: 371 IRYY 374
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ +G K+A + E++ +P+ TY +++ C +E A +F EM + G
Sbjct: 265 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 324
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN I GL G + E+ QRM+ + C+P+ +TY +MI Y + S+ AL
Sbjct: 325 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 384
Query: 245 KLFNEMRSHKCKPNICTYTALVNA-FARE 272
LF +M S C PN+ TY L++ F R+
Sbjct: 385 GLFEKMGSGDCLPNLDTYNILISGMFVRK 413
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY +LK + +G + A F EM+K V Y + + G G
Sbjct: 214 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 273
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A +F M R+ PS TY MI + K A+ +F EM +PN+ TY
Sbjct: 274 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 333
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMG 313
L+ G EE+ ++++ G EP+ YN ++ Y L +M G
Sbjct: 334 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 393
Query: 314 -CEPDRASYNIMVDA 327
C P+ +YNI++
Sbjct: 394 DCLPNLDTYNILISG 408
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Query: 94 ATWDDLINVSVQLRLNKK-WDPIVLMSCVSI--------LLIEAYGQKSLHKKAEFTYLE 144
+++D I+++ +L L+ W I M + I ++ E Y KA +L
Sbjct: 86 SSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLN 145
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ + C ++ +L C S +EKA +FR +R V YN ++G
Sbjct: 146 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 204
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
K +E+ + M P+ TY M+ + +A + A + F EM+ C+ ++ TYT
Sbjct: 205 TPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 264
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMG 313
+V+ F G + A +F+++ G+ P V YNA+++ A + M G
Sbjct: 265 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 324
Query: 314 CEPDRASYNIMVDAYGRAG 332
EP+ +YN+++ AG
Sbjct: 325 YEPNVTTYNVLIRGLFHAG 343
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+LE+ C TY ++ + ++G +++A VF EM + G+ PS YN+ I L K
Sbjct: 247 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 306
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
N + AV +F+ M R +P+ TY ++I A + +L M + C+PN T
Sbjct: 307 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 366
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y ++ ++ E+A +FE++ P++ YN L+
Sbjct: 367 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 406
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 144 ELLDS---RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
E+ DS R +P TY +LL+ + + L KA +FREM G P V Y +D L
Sbjct: 146 EIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILC 205
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G +A++I + M C+P++ Y+++I+ YG ++ A+ F M + K ++
Sbjct: 206 KAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVA 265
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
Y AL+ AF + + + ++ G++P+ N ++ EA+R+ RM
Sbjct: 266 AYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRM 325
Query: 311 HMGCEPDRASYNIMVDAY 328
CEPD +Y +M+ +
Sbjct: 326 IKVCEPDADTYTMMIKMF 343
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T+ ++++ Y + LE+A F M KY +PP+ +N L K N +KA EIF
Sbjct: 91 ETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDS 150
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
K D P ++TYT+++ +GK A ++F EM C P+I TY +V+ + G
Sbjct: 151 SK-DRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGR 209
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
+EA +I +++ +P + Y+ L+ Y + +R+ G + D A+YN
Sbjct: 210 VDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNA 269
Query: 324 MVDAY 328
++ A+
Sbjct: 270 LIGAF 274
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + +LI YG ++ + A T+L + + Y L+ A+C + V
Sbjct: 229 SFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLN 288
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ P++ N ++ L+ G +A +F+RM + C+P +TYT+MI ++ + +
Sbjct: 289 EMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIK-VCEPDADTYTMMIKMFCERN 347
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ MALK++ M+ P++ T++ L+N EG A + E + GI P +
Sbjct: 348 ELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFG 407
Query: 299 AL 300
L
Sbjct: 408 RL 409
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
S Y++ I+ L K Q ++ MKR + ET+ +++ Y +A K A+ F
Sbjct: 55 SVRAYHTMIESLAKIRQYQIMWDLINAMKRKR-MLNVETFCIIMRKYARAQKLEEAVYTF 113
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
N M + PN+ + L +A + +A+EIF+ + + PD Y L+E +
Sbjct: 114 NVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFV-PDSKTYTILLEGWGKT 172
Query: 305 ------RLISR--MHMGCEPDRASYNIMVDAYGRAG 332
R I R + +GC PD +Y IMVD +AG
Sbjct: 173 PNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAG 208
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT Y++L+ Y + +E A F M K G+ YN+ I K +
Sbjct: 225 CKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVY 284
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M QP++ T +++N ++ A ++F M C+P+ TYT ++ F
Sbjct: 285 RVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRM-IKVCEPDADTYTMMIKMF 343
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
E A ++++ ++ P ++ ++ L+
Sbjct: 344 CERNELEMALKVWKYMKKKHFVPSMHTFSVLI 375
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P DTY +++K +C LE A V++ M+K PS ++ I+GL + G+ A
Sbjct: 329 CEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHAC 388
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ + M +PS T+ + +L K +
Sbjct: 389 VMLEDMIEKGIRPSGVTFGRLRHLLIKEGRE 419
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+LD P +A L+ + +G L++A +F+ + + G+ P V YN+ I G K G
Sbjct: 471 EMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFG 530
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ +MK P TY+ +I+ Y K ALK+F +M HK KPN+ TYT
Sbjct: 531 KMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYT 590
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
+L+N F ++ AE++F ++ + P+V Y L+ +A + M M
Sbjct: 591 SLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMN 650
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
GC P+ A+++ +++ GL S L+E
Sbjct: 651 GCPPNDATFHYLIN-----GLTNTATSPVLIE 677
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ Y +K + A T EL +PT +TY L+ +C +G E + + EM
Sbjct: 241 MIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAAR 300
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL + V+N+ ID K G KA E +RM C P TY MIN K + A
Sbjct: 301 GLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEA 360
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + + PN +YT L++A+ ++G +A + ++ G +PD+ +Y A +
Sbjct: 361 DEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHG 420
Query: 304 --------YRLISR---MHMGCEPDRASYNIMVDAYGRAG 332
L+ R M G PD YN+++ + G
Sbjct: 421 VVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNG 460
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 13/190 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + +Y L+ AYC G KA + + + G P V Y ++I G++ G A+
Sbjct: 373 LPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALM 432
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF-NEMRSHKCKPNICTYTALVNAF 269
+ ++M P + Y ++++ K + F A+KL +EM +P++ + L++ F
Sbjct: 433 VREKMMEKGVFPDAQIYNVLMSGLCKNGR-FPAMKLLLSEMLDRNVQPDVYVFATLMDGF 491
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH--MGC---------EPDR 318
R G +EA +IF+ + G++P + YNA+++ + +M + C PD
Sbjct: 492 IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDE 551
Query: 319 ASYNIMVDAY 328
+Y+ ++D Y
Sbjct: 552 YTYSTVIDGY 561
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 51/232 (21%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
PT + ++ L+ AY SG L++A +F +R+ + P+ V NS ++GL+K G A++
Sbjct: 124 PTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQ 183
Query: 211 IFQRM--------------------KRDC-------------------CQPSTETYTLMI 231
++ +M K C C P Y ++I
Sbjct: 184 LYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMII 243
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ Y K A + E++ P + TY AL+N F + G E +++ ++ G+
Sbjct: 244 DGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLN 303
Query: 292 PDVYAYNALMEA---YRLISR--------MHMGCEPDRASYNIMVDAYGRAG 332
+V +N +++A Y L+++ MGC PD +YN M++ + G
Sbjct: 304 MNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGG 355
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P Y +++ YC G L+ A +E++ G+ P+ Y + I+G K G +
Sbjct: 232 CVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVD 291
Query: 210 EIFQRMKRDCCQPSTETYTLMINL---YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
++ M + + + +I+ YG +K+ ++ EM C P+I TY ++
Sbjct: 292 QLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEM---GCGPDITTYNTMI 348
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCE 315
N + G +EA+E E+ + G+ P+ ++Y LM AY L +G +
Sbjct: 349 NFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEK 408
Query: 316 PDRASYNIMV 325
PD SY +
Sbjct: 409 PDLVSYGAFI 418
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y ++ A + +++ + P TY L+ +C + +AE VFR M+ +
Sbjct: 557 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFD 616
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS---- 240
L P+ V Y + + G K G P+KA IF+ M + C P+ T+ +IN + S
Sbjct: 617 LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLI 676
Query: 241 ----------FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+ L F M S I Y +++ + G+ + A+ + ++ G
Sbjct: 677 EEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGF 736
Query: 291 EPDVYAYNALMEA 303
D + A++
Sbjct: 737 LIDSVCFTAMLHG 749
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++++K C G +E+ + ++ G P V YN IDG K G+ Q A + +
Sbjct: 203 TTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKEL 262
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P+ ETY +IN + KA + +L EM + N+ + +++A + GL
Sbjct: 263 KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLV 322
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+A E ++ G PD+ YN ++ EA + + G P++ SY +
Sbjct: 323 TKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPL 382
Query: 325 VDAYGRAG 332
+ AY + G
Sbjct: 383 MHAYCKQG 390
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++ P Y +L+ C +G + + EM + P V+ + +DG ++ G
Sbjct: 436 KMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNG 495
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A++IF+ + R P Y MI + K K AL N+M++ P+ TY+
Sbjct: 496 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYS 555
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HM 312
+++ + ++ A ++F Q+ +P+V Y +L+ + + M
Sbjct: 556 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSF 615
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCS 339
P+ +Y +V + +AG E S
Sbjct: 616 DLVPNVVTYTTLVGGFFKAGKPEKATS 642
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS-HKCKPNICTYTALVNAF 269
+ + MK +P+ E ++ +I YG++ AL+LF+ +R H C P + +L+N
Sbjct: 113 VLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGL 172
Query: 270 AREGLCEEAEEIFEQL----QGAGIEPDVYAYNALM----------EAYRLI-SRMHMGC 314
+ G + A ++++++ G G D Y + ++ E RL+ R GC
Sbjct: 173 VKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGC 232
Query: 315 EPDRASYNIMVDAYGRAG 332
P YN+++D Y + G
Sbjct: 233 VPHVVFYNMIIDGYCKKG 250
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY LL+ A M G +A + EM GL P YN I+G K GN +KA+EIF
Sbjct: 178 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 237
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ M R + + TYT +I K + KLF+E +P++ Y AL+N+ +
Sbjct: 238 ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 297
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G + A EI +++ I PD YN LM EA +LI M G +PD +Y
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 357
Query: 322 NIMVDAYGRAG 332
N ++ Y G
Sbjct: 358 NTLISGYSMKG 368
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ +C G ++KA +F M + G+ + V Y S I L K G Q+ ++
Sbjct: 212 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 271
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F R +P Y +IN + + A ++ EM + P+ TY L+
Sbjct: 272 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 331
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS-----------RMHMGCEPDRAS 320
G +EA ++ +++ GI+PD+ YN L+ Y + M+ G P +
Sbjct: 332 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 391
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKH 349
YN ++ + G +G + ++V+ V++
Sbjct: 392 YNALIQGLCKNG--QGDDAENMVKEMVEN 418
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLK 201
LELL P TY ++ +C G ++ A + REMR + G+ P+ Y + I G K
Sbjct: 61 LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCK 120
Query: 202 GGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
G +AV++F M + +P Y +I Y K AL + M +
Sbjct: 121 VGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA 180
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
TY LV+A +G EA E+ E++ G G+ PDV+ YN L+ +
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 224
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ YC G L+ A M + G+ + YN + L G +A E+
Sbjct: 142 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 201
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P TY ++IN + K AL++F M + + TYT+L+ A ++
Sbjct: 202 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 261
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G +E +++F++ GI PD+ YNAL+ ++ + E PD +
Sbjct: 262 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321
Query: 321 YNIMV 325
YN ++
Sbjct: 322 YNTLM 326
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY ++ +C G +++A VF EM G + P AV+YN+ I G G A+
Sbjct: 106 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 165
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
RM + TY L+++ + A +L EM P++ TY L+N
Sbjct: 166 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 225
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-MHMGCEPDRA 319
+EG ++A EIFE + G+ V Y +L+ E +L + G PD
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 285
Query: 320 SYNIMVDAYGRAG 332
YN +++++ +G
Sbjct: 286 LYNALINSHSTSG 298
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A +K ++ + + E + P Y L+ ++ SG +++A + EM K
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + GL G +A ++ M + QP TY +I+ Y AL
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ NEM + P + TY AL+ + G ++AE + +++ GI PD Y +L+E
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A A+F +M + LP +N + L G P +A+E+ ++M R P+ TY +I
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80
Query: 233 LYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-I 290
+ + AL + EMR PN TY +++ + + G +EA ++F+++ G +
Sbjct: 81 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140
Query: 291 EPDVYAYNALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
+P+ YNAL+ Y R++ R G A+YN++V A G G
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVER---GVAMTVATYNLLVHALFMDG--RG 195
Query: 337 KCSYSLVE 344
+Y LVE
Sbjct: 196 TEAYELVE 203
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ R P + TY L++ C+ G +++A + EM K G+ P V YN+ I G G
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + A+ I M P+ TY +I K + A + EM + P+ TY
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 428
Query: 264 ALVNAFAREGLCEEAEEIFEQ 284
+L+ EGL E E +
Sbjct: 429 SLI-----EGLTTEDERAIDD 444
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y K K A E+++ PT TY L++ C +G + AE + +EM + G
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419
Query: 185 LPPSAVVYNSYIDGL 199
+ P Y S I+GL
Sbjct: 420 ITPDDSTYISLIEGL 434
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G ++ G+ + + M
Sbjct: 126 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMH 185
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L +A+ LI M M G +PD+ +Y ++
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 305
Query: 326 DAYGRAG 332
D + G
Sbjct: 306 DGCCKEG 312
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 191 PDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M P TY + YG K + A L +EM KP+ TYT L++
Sbjct: 251 YKQMLSQSLSPDLITYNTLT--YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGC 308
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG E A E +++ I D Y AL+ +A +++ M +G +P+
Sbjct: 309 CKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNX 368
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 369 GTYTMIINEFCKKG 382
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 139 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVY 194
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 255 LSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDM 314
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P+ Y +
Sbjct: 315 ETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMI 374
Query: 301 MEAY 304
+ +
Sbjct: 375 INEF 378
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L C G L++A + EM GL P + Y + IDG K
Sbjct: 251 YKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 310
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KPN T
Sbjct: 311 EGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGT 370
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQ 286
YT ++N F ++G ++ +++Q
Sbjct: 371 YTMIINEFCKKGDVWTGSKLLKEMQ 395
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 29/290 (10%)
Query: 65 TAQQILRFVQREVDSNTIWDAFDSLPPTHA--------TWDDLINVSVQLRLNKKWDPIV 116
T Q+++ ++ E D FDS +A ++ +++ V K + IV
Sbjct: 15 TPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIV 74
Query: 117 ----LMSCV---SILLIEAYGQKSLHKKAEF--TYLELLDSRCIPTEDTYALLLKAYCMS 167
+ +CV ILL G +H+ + + ++ D C P++ Y +L
Sbjct: 75 ARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEE 134
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG-GNPQKAVEIFQRMKRDCCQPSTET 226
L A ++ MR+ GLPP+ N I L + G ++IF M + C P + T
Sbjct: 135 NQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYT 194
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +I+ + + A KLF EM C P + TYT+L+N +EA E+++
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMK 254
Query: 287 GAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRASYNIMV 325
G GIEP+V+ Y++LM+ R + M + GC P+ +Y ++
Sbjct: 255 GKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 11/187 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ C G +++A+ +F EM + P+ V Y S I+GL N +A+
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ MK +P+ TY+ +++ K +S A++LF M + C+PN+ TYT L+
Sbjct: 248 RYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDR 318
+E +EA E+ +++ G++PD Y ++ + +S+ G P+R
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNR 367
Query: 319 ASYNIMV 325
++NI V
Sbjct: 368 LTWNIHV 374
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + E+++ C PT TY L+ C S +++A EM+ G+ P+ Y+S +
Sbjct: 210 EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLM 269
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DGL K G +A+E+F+ M C+P+ TYT +I K K A++L + M K
Sbjct: 270 DGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEP 316
P+ Y +++ F EA +++ GI P+ +N ++ + R P
Sbjct: 330 PDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYP 389
Query: 317 DRA 319
RA
Sbjct: 390 SRA 392
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 195 YIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
Y+ L N KA E I RMK + C S + + YG+ + F +L++F++M+
Sbjct: 56 YMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------- 304
C P+ Y ++ E A + ++ ++ G+ P V + N L++A
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 305 --RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++ M GC+PD +Y ++ R G
Sbjct: 176 GLKIFHEMPKRGCDPDSYTYGTLISGLCRFG 206
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++ +C+ KA V +EM G+ P+ YN+ + G + G ++A E F M
Sbjct: 195 TYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEM 254
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+ TYT +++ +G A + +F+EM P++ TY A + ++
Sbjct: 255 KKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSV 314
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
E A +FE++ G EP+V YN L+ L+ RM + GCEP+ +YN+M
Sbjct: 315 ENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMM 374
Query: 325 VDAY 328
+ Y
Sbjct: 375 IRYY 378
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 63 SPTAQQILR-FVQREVDSN-----TIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIV 116
+P A ++L+ V R ++ N T+ F W+ L + K+ I
Sbjct: 209 TPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFF------LEMKKRNCEID 262
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
+++ ++ + +G K+ + E++ +P+ TY ++ C +E A +
Sbjct: 263 VVTYTTV--VHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVM 320
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F EM + G P+ YN I GL G + E+ QRM+ + C+P+ +TY +MI Y +
Sbjct: 321 FEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 380
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNA-FARE 272
S+ AL LF +M + C PN+ TY L++ F R+
Sbjct: 381 CSEVEKALGLFEKMGTGDCLPNLDTYNILISGMFVRK 417
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+LE+ C TY ++ + ++G +++ VF EM + G+ PS YN++I L K
Sbjct: 251 FLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCK 310
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ + AV +F+ M R +P+ TY ++I A K +L M + C+PN T
Sbjct: 311 KDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQT 370
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y ++ ++ E+A +FE++ P++ YN L+
Sbjct: 371 YNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILI 410
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 49/236 (20%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P+ T+A++ + Y SG +KA +F M ++G +N+ +D L K +KA
Sbjct: 119 RIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 178
Query: 209 VEIFQ----RMKRDCC------------------------------QPSTETYTLMINLY 234
E+F+ R D P+ TY M+ +
Sbjct: 179 YELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGF 238
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+A + A + F EM+ C+ ++ TYT +V+ F G + +F+++ G+ P V
Sbjct: 239 FRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSV 298
Query: 295 YAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
YNA ++ A + M G EP+ +YN+++ R H GK S
Sbjct: 299 ATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLI----RGLFHAGKFS 350
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 93 HATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP 152
H T DD +S + W P ++ S + L +G K+L F +L+ +
Sbjct: 36 HQTLDDQFILSTK---TTPWTPNLVNSVLKRLW--NHGPKALQF---FHFLDNHHREYVH 87
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
++ L + + ++ MR + PS + + G P KAV++F
Sbjct: 88 DASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLF 147
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M C ++ ++++ K+ + A +LF +R + + TY +VN +
Sbjct: 148 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG-RFSADTVTYNVIVNGWCLI 206
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASY 321
+A E+ +++ GI P++ YN +++ + ++ CE D +Y
Sbjct: 207 KRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTY 266
Query: 322 NIMVDAYGRAG 332
+V +G AG
Sbjct: 267 TTVVHGFGVAG 277
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
L +++ +P +Y L+ YC G +A+ +F+EM+K G P+AV YN IDG K
Sbjct: 165 LTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKK 224
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNI 259
G ++A E+ M+ P TYT +++ ++GK A++LFNE+R N+
Sbjct: 225 GRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDD---AVELFNEVRQKGLPLNV 281
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
TYTA+++ ++EG EEA ++++++ AG+ PD Y +L+ +
Sbjct: 282 VTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSS 325
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ YC GL+++A V M K G N+ DGL K P++A M
Sbjct: 109 YNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMI 168
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ +YT +I++Y K A KLF EM+ +PN TY L++ +++G +
Sbjct: 169 EKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMK 228
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
EA E+ ++++ GI PD+Y Y +L+ + ++ E
Sbjct: 229 EAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVE 267
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+ + SG +++ E +F EM + G+ VY I+ K GN ++A +F +
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ TY +I+ KA + A L NEM++ N Y L++ + + GL
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIM 324
+EA ++ ++ G E D+Y N + + R L++ + G P+ SY +
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTL 182
Query: 325 VDAYGRAG 332
+D Y + G
Sbjct: 183 IDIYCKEG 190
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 11/172 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
E+A+ M + G+ P+ V Y + ID K GN +A ++FQ MK+ +P+ TY ++
Sbjct: 158 EEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVL 217
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ + K + A +L +EMR+ P+I TYT+L++ G ++A E+F +++ G+
Sbjct: 218 IDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGL 277
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRA 331
+V Y A++ EA++L M G PD Y +V + +A
Sbjct: 278 PLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ +G + E + E+ + Y +++ C G ++A A+F E+ +
Sbjct: 6 LLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEK 65
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
GL + Y + IDG+ K G + A + M+ + Y +I+ Y G ++
Sbjct: 66 GLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEA 125
Query: 241 FM----------------------ALKLFNE----------MRSHKCKPNICTYTALVNA 268
F L+ N+ M PN+ +YT L++
Sbjct: 126 FKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDI 185
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE--PDRASYNIMVD 326
+ +EG EA+++F++++ AG EP+ YN L++ + RM E + + I D
Sbjct: 186 YCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPD 245
Query: 327 AYGRAGLHEGKCSYSLVELSVKHY 350
Y L G+C + ++ +V+ +
Sbjct: 246 IYTYTSLLHGECIFGKLDDAVELF 269
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + +K K+A E+ P TY LL C+ G L+ A +F E+R+
Sbjct: 216 VLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQK 275
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
GLP + V Y + I GL K G ++A +++ M P YT +++ KA
Sbjct: 276 GLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TYTL+I+ +G + K ++F EM K +I YT ++N + G + A +F++L
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 286 QGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
G+ +V+ Y AL++ A L++ M G + ++ YN ++D Y + GL
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 101/188 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ +K +KA + ++L PT+ T+ ++ C G + +A + +
Sbjct: 504 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 563
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS + YNS +DG +K GN A+ +++ M P+ TYT +IN + K+++ +A
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LK +EMR + ++ Y+AL++ F + E A+++F +L G+ P+ YN+++
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 683
Query: 304 YRLISRMH 311
+R ++ M
Sbjct: 684 FRDLNNME 691
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L+ +C +E A+ +F E+ + GL P+ +VYNS I G N + A+ +++M
Sbjct: 642 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 701
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D TYT +I+ K + A L+ EM S P+I T+ LVN +G E
Sbjct: 702 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 761
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A +I E++ + P V YN L+ EA+ L M G PD +Y+I++
Sbjct: 762 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 821
Query: 326 DA 327
+
Sbjct: 822 NG 823
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + +K A + ++L P TY++L+ G EKA +F +M
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +N+ I+GL K G +A + + + PS TY +++ + K AL
Sbjct: 530 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 589
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM PN+ TYT+L+N F + + A + ++++ G+E DV AY+AL++ +
Sbjct: 590 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 649
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAY 328
+ +G P+R YN M+ +
Sbjct: 650 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 58/298 (19%)
Query: 91 PTHATWDDLI-------NVSVQLRLNKKW----DPIVLMSCVSILLIEAYGQKSLHKKAE 139
P+ AT+ +I N+ LRL ++ P+ L+ S L++ Y + A
Sbjct: 288 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS--LMKGYCAQGNLDSAL 345
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ ++ + P + TY++L++ C SG +EKA ++ +M+ G+PPS NS + G
Sbjct: 346 NLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGY 405
Query: 200 L----------------------------------KGGNPQKAVEIFQRMKRDCCQPSTE 225
L KGG +A + M P+
Sbjct: 406 LKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 465
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+Y MI + + MA +F++M + KPN+ TY+ L++ ++G E+A ++F+Q+
Sbjct: 466 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525
Query: 286 QGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
I P + +N ++ +L + + G P +YN +VD + + G
Sbjct: 526 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 583
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P+E T+ ++ A G + +A + EM G P + VV S + G GN A+
Sbjct: 287 VPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALN 346
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F ++ D P+ TY+++I + A +L+ +M+ + P++ +L+ +
Sbjct: 347 LFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL 406
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ L EEA ++F++ G+ +++ YN +M EA L+ M + G P+
Sbjct: 407 KAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 465
Query: 320 SYNIMVDAYGRAG 332
SYN M+ + R G
Sbjct: 466 SYNDMILGHCRKG 478
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++ + A+ + ELL+ P Y ++ + +E A +++M
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+P Y + IDGLLK G A +++ M P T+ +++N + A
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 764
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM P++ Y L+ + REG +EA + +++ G+ PD Y+ L+
Sbjct: 765 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y+E+L +P T+ +L+ C G LE A + EM + + PS ++YN+ I G +
Sbjct: 732 YMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFR 791
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
GN ++A + M P TY ++IN K +S
Sbjct: 792 EGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 831
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
DS P D LIN + K++D L V L+ AY + + + A + ++
Sbjct: 125 DSDPSPVVFVDHLINCA------KRFD-FELDHRVFNYLLNAYIRANRIENAIDCFNAMI 177
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
IP +LL A ++ + ++ +M G+ + + LK G +
Sbjct: 178 CQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVE 237
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A E F+ K + Y+++I K S + L+L EM+ P+ T+T+++
Sbjct: 238 EAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 297
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCE 315
A +G EA + E++ G ++ +LM+ Y L S +++ G
Sbjct: 298 VACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLF 357
Query: 316 PDRASYNIMVDAYGRAG 332
P++ +Y+++++ +G
Sbjct: 358 PNKVTYSVLIEGCCNSG 374
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+ K + P V C +IL I Y + + KA+ Y E++ P + TY L+ C
Sbjct: 21 ITKGYKPDVF--CYNIL-INGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQL 77
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G L +A+ +F+ M K G P Y+ +DGL K G KA +F+ M+ +P Y
Sbjct: 78 GRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMY 137
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
++++ K+ A +LF+E+ +PN+ YT ++N +EGL +EA E F ++
Sbjct: 138 NILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 197
Query: 288 AGIEPDVYAYNALMEAY 304
G PD ++YN ++ +
Sbjct: 198 DGCPPDEFSYNVIIRGF 214
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +L+ YC + ++KA+ ++ EM GL P V YN+ I GL + G ++A ++
Sbjct: 27 PDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDL 86
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M ++ P Y+++++ K A +LF M+S KP++ Y LV+A +
Sbjct: 87 FKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCK 146
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDR 318
G ++A E+F +L G++P+V Y + +EA+R + GC PD
Sbjct: 147 SGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME--EDGCPPDE 204
Query: 319 ASYNIMVDAY 328
SYN+++ +
Sbjct: 205 FSYNVIIRGF 214
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 88 SLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
L P T++ LI+ QL RL + D K++HK
Sbjct: 59 GLTPDKVTYNTLIHGLCQLGRLREAQDLF----------------KNMHKNGN------- 95
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+P Y++LL C G L KA +FR M+ L P V+YN +D + K GN +
Sbjct: 96 ----LPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLK 151
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A E+F + QP+ + YT +IN K AL+ F M C P+ +Y ++
Sbjct: 152 DARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVII 211
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDV 294
F + A + +++ G DV
Sbjct: 212 RGFLQHKDESRAVHLIGEMRDRGFIADV 239
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A +F M G P YN I+G K KA +++ M P TY +I
Sbjct: 12 EARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLI 71
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ + + A LF M + P++ Y+ L++ ++G +A +F +Q + ++
Sbjct: 72 HGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLK 131
Query: 292 PDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
PD+ YN L++A L S + + G +P+ Y +++ + GL
Sbjct: 132 PDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGL 184
>gi|145341746|ref|XP_001415964.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
gi|144576187|gb|ABO94256.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
Length = 632
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 22/252 (8%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
LN+ DP + L++ A+ + + H A T+ EL++ P TY L + S
Sbjct: 197 LNEDVDPAP--AAYHTLIVAAH-RANQHDLAVRTFDELIEEGITPARQTYETALDSMARS 253
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP--QKAVEIFQRMK-RDCCQPST 224
GLL +A VF +M+ GL P V YN+ + + P + A EIF+ M+ + P
Sbjct: 254 GLLAQALEVFVQMKSNGLMPRKVTYNTLLSACVNAPQPRVEAAFEIFEEMQTKGNVTPDR 313
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV-----NAFAREGLCEEAE 279
TY+L+I+ KA K MA F+ MR + + T L+ NA +
Sbjct: 314 STYSLLIDAACKAGKPEMAFDAFSHMRDSGIEIQVGTLNRLIHAAGLNAKEDSTSVQATL 373
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAY 328
E+++ ++ G+EPDV Y +L+ A ++ M G EP+R +N++++A
Sbjct: 374 ELYDAMKKLGVEPDVITYGSLIATCAKARDAATAIKVYEEMRAAGVEPNRILFNVLINAL 433
Query: 329 GRAGLHEGKCSY 340
GRA E Y
Sbjct: 434 GRANRSEEAMEY 445
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 137 KAEFTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+A F E + ++ P TY+LL+ A C +G E A F MR G+ N
Sbjct: 294 EAAFEIFEEMQTKGNVTPDRSTYSLLIDAACKAGKPEMAFDAFSHMRDSGIEIQVGTLNR 353
Query: 195 YI-----DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
I + + Q +E++ MK+ +P TY +I KA + A+K++ E
Sbjct: 354 LIHAAGLNAKEDSTSVQATLELYDAMKKLGVEPDVITYGSLIATCAKARDAATAIKVYEE 413
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ-----GAGIEPDVYAYNALMEAY 304
MR+ +PN + L+NA R EEA E F +Q + + P+ Y + +A+
Sbjct: 414 MRAAGVEPNRILFNVLINALGRANRSEEAMEYFRVMQKQSEVNSSLTPNRETYTTVFDAF 473
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 121/262 (46%), Gaps = 27/262 (10%)
Query: 94 ATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPT 153
A+ ++++ + ++R + +P+ +L+ + G ++A Y + +++ T
Sbjct: 70 ASMEEVLGLVKEMR-DAGLEPVESTYVAVMLVCQNVGSP---ERAVQVYDAMTEAQVRMT 125
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL-----KGGNPQ-- 206
T+ L ++ + + + A + +MR GLP S+ +Y + + L K PQ
Sbjct: 126 GRTFHLAIELALKAEMFKDALRIKDDMRYVGLPVSSKLYVTLLRALADNDMGKRKGPQER 185
Query: 207 --KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ +F+ M + P+ Y +I +A++ +A++ F+E+ P TY
Sbjct: 186 LIRTCRLFEEMLNEDVDPAPAAYHTLIVAAHRANQHDLAVRTFDELIEEGITPARQTYET 245
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME------------AYRLISRMHM 312
+++ AR GL +A E+F Q++ G+ P YN L+ A+ + M
Sbjct: 246 ALDSMARSGLLAQALEVFVQMKSNGLMPRKVTYNTLLSACVNAPQPRVEAAFEIFEEMQT 305
Query: 313 --GCEPDRASYNIMVDAYGRAG 332
PDR++Y++++DA +AG
Sbjct: 306 KGNVTPDRSTYSLLIDAACKAG 327
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+E+ + +EMR GL P Y + + G+P++AV+++ M + + T+ L
Sbjct: 72 MEEVLGLVKEMRDAGLEPVESTYVAVMLVCQNVGSPERAVQVYDAMTEAQVRMTGRTFHL 131
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA------REGLCE---EAEE 280
I L KA AL++ ++MR + Y L+ A A R+G E
Sbjct: 132 AIELALKAEMFKDALRIKDDMRYVGLPVSSKLYVTLLRALADNDMGKRKGPQERLIRTCR 191
Query: 281 IFEQLQGAGIEPDVYAYNALMEA------YRLISR-----MHMGCEPDRASYNIMVDAYG 329
+FE++ ++P AY+ L+ A + L R + G P R +Y +D+
Sbjct: 192 LFEEMLNEDVDPAPAAYHTLIVAAHRANQHDLAVRTFDELIEEGITPARQTYETALDSMA 251
Query: 330 RAGL 333
R+GL
Sbjct: 252 RSGL 255
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ YC + +++A ++F +M L P+ V Y+S IDGL K G A E+
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F + P+ TY +M++ K A++LFN M PN+ +Y L+N + +
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGCEP-DRAS 320
+EA +FE++ + PD YN L++ A+ L + MH G P D +
Sbjct: 476 SKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVIT 535
Query: 321 YNIMVDAYGR 330
YNI+ DA+ +
Sbjct: 536 YNILFDAFSK 545
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ A C G+L KA + M + G P V +N+ + G + +A ++F
Sbjct: 290 TYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTF 349
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P +Y ++I Y K ++ AL LFN+M K PNI TY++L++ + G
Sbjct: 350 AECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRI 409
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISR--------MHMGCEPDRASYNIM 324
A E+F + G P+V YN +++A +L+ + G P+ +SYNI+
Sbjct: 410 SYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNIL 469
Query: 325 VDAYGRA 331
++ Y ++
Sbjct: 470 INGYCKS 476
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ C SG + A +F + G P+ + YN +D L K KA+E+
Sbjct: 391 PNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIEL 450
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ +Y ++IN Y K+ + A+ LF EM P+ TY L++ +
Sbjct: 451 FNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCK 510
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
G A E+F + G DV YN L +A+ I +
Sbjct: 511 SGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+A +K + KA +++ P T+ L+ YC+ + +A +F +
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN I G K +A+ +F +M P+ TY+ +I+ K+ + A
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF+ + PN+ TY +++A + L ++A E+F + G+ P+V +YN L+
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA L MH PD +YN ++D ++G
Sbjct: 473 YCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 11/186 (5%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY L+ C GL +A + +M + P+ V+YN +DGL K G +A +++
Sbjct: 183 EVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS 242
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
+ P TYT +I+ + + +L +M N+ TY L++A ++G
Sbjct: 243 DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG 302
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYN 322
+ +A ++ + G PD+ +N LM Y L + + G PD SYN
Sbjct: 303 MLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYN 362
Query: 323 IMVDAY 328
I++ Y
Sbjct: 363 ILIIGY 368
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 17/241 (7%)
Query: 100 INVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED-TYA 158
I++S Q+ L IV +S +LI Y H F+ L ++ R T
Sbjct: 98 ISLSKQMGLRGITPSIVTLS----ILINCYCHLG-HMGFAFSVLGMVLKRGYQLNAITLT 152
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
++K C++G + KA + G V Y + I+GL K G ++A E+ +M+
Sbjct: 153 TIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQ 212
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+P+ Y ++++ K A L++++ P++ TYT L++ F G E
Sbjct: 213 VVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREV 272
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH--------MGCEPDRASYNIMVDA 327
+ + + +VY YN L++A ++ + H G PD ++N ++
Sbjct: 273 TRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332
Query: 328 Y 328
Y
Sbjct: 333 Y 333
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 11/175 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
++ A A+F + PS V +N + ++K + A+ + ++M PS T ++
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+IN Y A + + + N T T ++ G +A E + + G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178
Query: 290 IEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGL 333
D Y L+ EA+ L+ +M P+ YN++VD + GL
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGL 233
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K GN + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A L M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGHLETAFEY 333
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSV 416
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M + G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 322
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY AL+ +A +++ M +G
Sbjct: 323 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 383 LKPDARTYTMIINEFCKKG 401
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRLAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 134/308 (43%), Gaps = 31/308 (10%)
Query: 51 GSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF-DSLPPTHATWDDLINVSVQL-RL 108
G G G+ + S + + + + N I +F D L ++ IN + RL
Sbjct: 671 GKGIELGVVSI-SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRL 729
Query: 109 ---NKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLD-SRCIPT-----E 154
N +D +V + + +I YG+ KA +E+ + +RC E
Sbjct: 730 HFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKA----VEMFNKARCSGVGVSLDE 785
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY L+ Y +G +A +FREM++ G+ P V YN I+ G +A E+FQ
Sbjct: 786 KTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQA 845
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M RD C P + TY +I Y ++ K A + M++ P+ + L++AFA+ G
Sbjct: 846 MLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGF 905
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMGCEPDRASYNIM 324
EEAE ++ L AG+ PDV Y ++ Y ++ EPDR +
Sbjct: 906 TEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPDRFIMSSA 965
Query: 325 VDAYGRAG 332
V Y AG
Sbjct: 966 VHFYKLAG 973
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 125 LIEAYGQKSLHKKA--EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI YG++ KKA F+ +E C + Y ++ AY G E+A ++ E+
Sbjct: 616 LITLYGKQHKLKKAIEVFSAIE----GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTG 671
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ V + + L G Q+A + +R D + T Y IN A +
Sbjct: 672 KGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHF 731
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ--GAGIEPDVYAYNAL 300
A +++ M S P+I TY +++ + R ++A E+F + + G G+ D Y L
Sbjct: 732 ANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNL 791
Query: 301 MEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLH 334
+ Y + H G +P + SYNIM++ Y AGLH
Sbjct: 792 ISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLH 836
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
++L + P V+ V +L+ YGQ K AE +LE+L++ C P E +L Y
Sbjct: 182 MKLQLSYQPSVI---VYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYA 238
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYN-------------SYID-GLLKGGNPQKAVEI 211
G + + + +++ G+ PS V+N ID L+K G +++ +
Sbjct: 239 RWGRHKAMLSFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKT 298
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK P TY+L+I+L K A+KL+ +MR + P+ T +L+ + +
Sbjct: 299 FYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYK 358
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G A +F +++ I D Y L+ Y
Sbjct: 359 NGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIY 391
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 8/208 (3%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
T+ E+ + +P E TY+LL+ +G ++A ++ +MR + PS S +
Sbjct: 298 TFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYY 357
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G+ +AV +F M+++ Y L+I +YGK A K F E N
Sbjct: 358 KNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEK 417
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS 320
TY A+ G E+A I E ++ I ++Y L++ Y + + D AS
Sbjct: 418 TYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVM--------KEDLAS 469
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVK 348
A + GL + ++ L +K
Sbjct: 470 AEATFQALSKTGLPDAGSCNDMLNLYIK 497
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSA--------------------VVYNSYIDGL 199
++K YC G+L A+ + +EM GL + V + I
Sbjct: 526 VMKVYCKKGMLRDAKQLIQEMGTNGLFKDSEFIQTLSLILKMLLKTAGGLSVASHLISKF 585
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ G+ KA + ++ + + +I LYGK K A+++F+ + C
Sbjct: 586 TREGDISKAQNLNDQLVKLGRGAEDASIASLITLYGKQHKLKKAIEVFSAIEG--CTSGK 643
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA----------YNALMEAYRLISR 309
Y ++++A+A+ G EEA ++E++ G GIE V + Y EA +I R
Sbjct: 644 LIYISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRR 703
Query: 310 -MHMGCEPDRASYNIMVDAYGRAG-LHEGKCSYS-LVELSV 347
G E D +YN ++A AG LH Y +V L V
Sbjct: 704 SFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGV 744
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 22/229 (9%)
Query: 91 PTHATWDDLINVS---------VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
P T+ LI++S ++L + ++ IV + L+ Y + + +A
Sbjct: 309 PEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSL 368
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ ++ + E Y LL++ Y GL E AE F+E + GL + Y + L
Sbjct: 369 FSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLN 428
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKASKSFMALKLFNEMRSHKC 255
GN +KA+ I + M+ S +Y +++ Y A +F AL S
Sbjct: 429 SGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLASAEATFQAL-------SKTG 481
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P+ + ++N + + L E+A++ Q++ +E D+ +M+ Y
Sbjct: 482 LPDAGSCNDMLNLYIKLDLLEKAKDFIFQIRKDPVEFDMELCKTVMKVY 530
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 25/140 (17%)
Query: 206 QKAVEIFQRMKRDCC-QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A + F MK QPS YT+++ +YG+ K +A + F EM C+P+
Sbjct: 173 RQARDFFGWMKLQLSYQPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGT 232
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIM 324
++ +AR G + + +Q GI P + A +N M
Sbjct: 233 MLCTYARWGRHKAMLSFYSAVQERGIIPSI------------------------AVFNFM 268
Query: 325 VDAYGRAGLHEGKCSYSLVE 344
+ + + LH +SLV+
Sbjct: 269 LSSLQKKSLHGKVIDFSLVK 288
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M + G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGCCKEG 325
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 316
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY AL ++A +++ M +G
Sbjct: 317 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVG 376
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 377 LKPDARTYTMIINEFCKKG 395
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 152 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 207
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL + +EG +AE++ ++ G++PD Y +
Sbjct: 328 DSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT + + + +S A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAE 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V
Sbjct: 367 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 416
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L++ +C G + A+ V + K+GL PS V +N+ I+G ++ G+ + + M
Sbjct: 137 FNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMH 196
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 197 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVD 256
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 257 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLI 316
Query: 326 DAYGRAG 332
D + G
Sbjct: 317 DGCCKEG 323
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%), Gaps = 13/234 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q +++ T W L P+ +++ LIN ++L L++ + M +
Sbjct: 150 IRVAQLVLNAITKW----GLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVY 205
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 206 TYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 265
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G ++A ++ M + +P TYT +I+ K
Sbjct: 266 LSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDM 325
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
A + M + + YTAL++ +EG +AE++ ++ G++P+
Sbjct: 326 ETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNT 379
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM G+ P+ V + + IDG K G A+EI
Sbjct: 202 PDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEI 261
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K + A L +EM KP+ TYT L++ +
Sbjct: 262 YKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCK 321
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EG E A E +++ I D Y AL+
Sbjct: 322 EGDMETAFEHQKRMIQENIRLDDVVYTALISG 353
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 3/226 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ Y + K+E + + +P + + + L AYC G +E+AE V + + G
Sbjct: 338 MVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEG 397
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V YN+ I G K + QKA+E+F R+K P TY MI +G+A K A+
Sbjct: 398 IALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAI 457
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ ++R+ KPN + ++N AR E A EI E ++ AG + L+ AY
Sbjct: 458 LYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIV-TVLVRAY 516
Query: 305 RLISRMHMGCEPDRASY--NIMVDAYGRAGLHEGKCSYSLVELSVK 348
+ RMH + +A + I+ DA + L G SLVE +++
Sbjct: 517 GSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMR 562
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + T +LL Y +GL KAE VF RK G+ + YN+ I K G
Sbjct: 742 EMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMA-DIISYNTIIAAHAKNG 800
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + + QRM+ S E Y M++ YGKA + + +M C+ + TY
Sbjct: 801 DFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYN 860
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM- 312
++N + R+G E + +L+ G EPD+Y+YN L++AY +L+ M +
Sbjct: 861 IMINIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIK 920
Query: 313 GCEPDRASYNIMVDAYGR 330
G DR +Y ++ A R
Sbjct: 921 GIAADRVTYTNLIAALQR 938
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ YG+ L KAE +L + + + +Y ++ A+ +G + M++
Sbjct: 757 VLLDIYGKAGLFNKAEKVFL-MARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEA 815
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P S YN +D K G ++ + Q+M+R C+ TY +MIN+YG+
Sbjct: 816 GFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGV 875
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ E++S +P++ +Y L+ A+ G+ E+A ++ ++++ GI D Y L+ A
Sbjct: 876 ANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAA 935
Query: 304 YR 305
+
Sbjct: 936 LQ 937
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + + +L+ Y GLLEK + + K + +YN I+ + +
Sbjct: 679 VPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSR 738
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF M + +T T +++++YGKA A K+F M + +I +Y ++ A A
Sbjct: 739 IFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF-LMARKQGMADIISYNTIIAAHA 797
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRA 319
+ G +++Q AG + AYN +++AY ++ +M GCE D
Sbjct: 798 KNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHY 857
Query: 320 SYNIMVDAYGRAGLHEG 336
+YNIM++ YGR G EG
Sbjct: 858 TYNIMINIYGRKGWIEG 874
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+G K LH +L+ P T +L+ Y G L +AE F +MRK G+
Sbjct: 281 WGTKWLHM--------MLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGIK-C 331
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
Y++ + + G+ K+ E+ M D P+ E + + +N Y + K A +
Sbjct: 332 VNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLK 391
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+ N+ Y ++ + + ++A E+F++L+ AG+ PD Y +++E +
Sbjct: 392 SLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRAD 451
Query: 309 R-----------MHMGCEPDRASYNIMVDAYGRAGLHEG 336
+ + G +P+ +++ M++ R EG
Sbjct: 452 KYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEG 490
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 120/307 (39%), Gaps = 56/307 (18%)
Query: 87 DSLPPTHATWDDLINVSVQ--------LRLNKKWDPIVLMSCVSI-LLIEAYGQKSLHKK 137
D + P W +N Q L L D + ++ V+ +I YG+ S +K
Sbjct: 361 DEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQK 420
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + L + P E TY +++ + + ++A +R++R G P+A + + I+
Sbjct: 421 AMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMIN 480
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + + + A EI + M+ CQ S+ T+++ YG + L++ K
Sbjct: 481 LLARHDDSEGATEILEDMRAAGCQCSS-IVTVLVRAYGSVGRMHKVLQILKACFYKKILF 539
Query: 258 NICTYTALVNAFARE-----------------------------------GLCEEAEEIF 282
+ + + LV F + G C++A I+
Sbjct: 540 DATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIY 599
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
Q+ + P++ Y ++++ + ++ R C D +Y+++V Y +A
Sbjct: 600 NQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKA 659
Query: 332 GLHEGKC 338
G E C
Sbjct: 660 GRPEDAC 666
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 46/257 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IE +G+ +K+A Y +L +S P + ++ E A + +MR G
Sbjct: 443 MIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAG 502
Query: 185 LPPSAVV------YNSY----------------------------IDGLLKGGNPQKAVE 210
S++V Y S + G ++ ++A+
Sbjct: 503 CQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMR 562
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + K Y ++I +A A++++N+M PN+ Y ++++ F+
Sbjct: 563 VLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFS 622
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC------------EPDR 318
+AE ++ +L+ + D+ AY+ ++ Y R C PD+
Sbjct: 623 IMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDK 682
Query: 319 ASYNIMVDAYGRAGLHE 335
+ M+ Y + GL E
Sbjct: 683 YLFLDMLRTYQKCGLLE 699
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I YG+K + EL P +Y L+KAY ++G+ E A + +EMR
Sbjct: 861 IMINIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIK 920
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
G+ V Y + I L + N +AV+ MK+
Sbjct: 921 GIAADRVTYTNLIAALQRNENFLEAVKWSLWMKQ 954
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 3/226 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ Y + K+E + + +P + + + L AYC G +E+AE V + + G
Sbjct: 338 MVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEG 397
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V YN+ I G K + QKA+E+F R+K P TY MI +G+A K A+
Sbjct: 398 IALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAI 457
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ ++R+ KPN + ++N AR E A EI E ++ AG + L+ AY
Sbjct: 458 LYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAGCQCSSIV-TVLVRAY 516
Query: 305 RLISRMHMGCEPDRASY--NIMVDAYGRAGLHEGKCSYSLVELSVK 348
+ RMH + +A + I+ DA + L G SLVE +++
Sbjct: 517 GSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMR 562
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + T +LL Y +GL KAE VF RK G+ + YN+ I K G
Sbjct: 742 EMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMA-DIISYNTIIAAHAKNG 800
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + + QRM+ S E Y M++ YGKA + + +M C+ + TY
Sbjct: 801 DFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYN 860
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM- 312
++N + R+G E + +L+ G EPD+Y+YN L++AY +L+ M +
Sbjct: 861 IMINIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIK 920
Query: 313 GCEPDRASYNIMVDAYGR 330
G DR +Y ++ A R
Sbjct: 921 GIAADRVTYTNLIAALQR 938
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ YG+ L KAE +L + + + +Y ++ A+ +G + M++
Sbjct: 757 VLLDIYGKAGLFNKAEKVFL-MARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEA 815
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P S YN +D K G ++ + Q+M+R C+ TY +MIN+YG+
Sbjct: 816 GFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGV 875
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ E++S +P++ +Y L+ A+ G+ E+A ++ ++++ GI D Y L+ A
Sbjct: 876 ANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAA 935
Query: 304 YR 305
+
Sbjct: 936 LQ 937
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + + +L+ Y GLLEK + + K + +YN I+ + +
Sbjct: 679 VPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSR 738
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IF M + +T T +++++YGKA A K+F M + +I +Y ++ A A
Sbjct: 739 IFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF-LMARKQGMADIISYNTIIAAHA 797
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRA 319
+ G +++Q AG + AYN +++AY ++ +M GCE D
Sbjct: 798 KNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHY 857
Query: 320 SYNIMVDAYGRAGLHEG 336
+YNIM++ YGR G EG
Sbjct: 858 TYNIMINIYGRKGWIEG 874
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 129 YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
+G K LH +L+ P T +L+ Y G L +AE F +MRK G+
Sbjct: 281 WGTKWLHM--------MLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGIK-C 331
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
Y++ + + G+ K+ E+ M D P+ E + + +N Y + K A +
Sbjct: 332 VNAYSAMVTLYTRLGHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLK 391
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+ N+ Y ++ + + ++A E+F++L+ AG+ PD Y +++E +
Sbjct: 392 SLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRAD 451
Query: 309 R-----------MHMGCEPDRASYNIMVDAYGRAGLHEG 336
+ + G +P+ +++ M++ R EG
Sbjct: 452 KYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEG 490
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 120/307 (39%), Gaps = 56/307 (18%)
Query: 87 DSLPPTHATWDDLINVSVQ--------LRLNKKWDPIVLMSCVSI-LLIEAYGQKSLHKK 137
D + P W +N Q L L D + ++ V+ +I YG+ S +K
Sbjct: 361 DEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQK 420
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + L + P E TY +++ + + ++A +R++R G P+A + + I+
Sbjct: 421 AMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMIN 480
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L + + + A EI + M+ CQ S+ T+++ YG + L++ K
Sbjct: 481 LLARHDDSEGATEILEDMRAAGCQCSS-IVTVLVRAYGSVGRMHKVLQILKACFYKKILF 539
Query: 258 NICTYTALVNAFARE-----------------------------------GLCEEAEEIF 282
+ + + LV F + G C++A I+
Sbjct: 540 DATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIY 599
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
Q+ + P++ Y ++++ + ++ R C D +Y+++V Y +A
Sbjct: 600 NQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKA 659
Query: 332 GLHEGKC 338
G E C
Sbjct: 660 GRPEDAC 666
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 46/257 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+IE +G+ +K+A Y +L +S P + ++ E A + +MR G
Sbjct: 443 MIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAG 502
Query: 185 LPPSAVV------YNSY----------------------------IDGLLKGGNPQKAVE 210
S++V Y S + G ++ ++A+
Sbjct: 503 CQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMR 562
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + K Y ++I +A A++++N+M PN+ Y ++++ F+
Sbjct: 563 VLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFS 622
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC------------EPDR 318
+AE ++ +L+ + D+ AY+ ++ Y R C PD+
Sbjct: 623 IMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDK 682
Query: 319 ASYNIMVDAYGRAGLHE 335
+ M+ Y + GL E
Sbjct: 683 YLFLDMLRTYQKCGLLE 699
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I YG+K + EL P +Y L+KAY ++G+ E A + +EMR
Sbjct: 861 IMINIYGRKGWIEGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIK 920
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
G+ V Y + I L + N +AV+ MK+
Sbjct: 921 GIAADRVTYTNLIAALQRNENFLEAVKWSLWMKQ 954
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M + G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 322
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY AL+ +A +++ M +G
Sbjct: 323 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 383 LKPDARTYTMIINEFCKKG 401
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRJAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L C P+ TY +LL+A C S +A V EMR G P+ V YN I+G+ + G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A EI R+ QP +YT ++ A + LF EM KC PN T+
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-G 313
LV F R G+ E A ++ +Q+ G P+ N ++ +AY ++ M M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 314 CEPDRASYNIMVDAYGRAGLHE 335
C PD SY ++ RAG E
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWE 379
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E++D +C+P E T+ +L++ +C G++E+A V ++M ++G P+ + N I+ + K
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 339
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G A + M C P T +YT ++ +A + A +L EM C PN T
Sbjct: 340 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 399
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HMG 313
+ + ++GL E+A ++ E + G + YNAL+ + + R+ ++
Sbjct: 400 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP 459
Query: 314 CEPDRASYNIMVDAYGRA 331
CEP+ +Y ++ A
Sbjct: 460 CEPNTITYTTLLTGLCHA 477
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 143 LELLDS-RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LEL ++ C P TY LL C + L+ A + EM + P +AV +N + +
Sbjct: 452 LELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQ 511
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++A+E+ +M C P+ T+ +++ K S AL+L + + S + T
Sbjct: 512 KGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTIT 571
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y+++V+ +RE EEA ++ +Q G+ P V YN ++ +A + M
Sbjct: 572 YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 631
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
GC P+ ++Y I+++ GL + + Y L EL K
Sbjct: 632 SNGCMPNESTYIILIEGLAHEGLLK-EARYVLSELYAK 668
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 13/233 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+EA + S +A E+ C P TY +++ C G ++ A+ + + Y
Sbjct: 192 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 251
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y + + GL +F M C P+ T+ +++ + + A
Sbjct: 252 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 311
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+++ +M H C PN ++NA ++G ++A + + G PD +Y ++
Sbjct: 312 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 371
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
A L+ M C P+ ++N + + GL E + L+EL
Sbjct: 372 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ--AIKLIEL 422
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 35/182 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ C T+ +L+ +C G +E+A + +M ++G P+ + +N+ +DG+ K
Sbjct: 489 EMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 548
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL----------------- 246
N ++A+E+ + T TY+ ++++ + ++ A+++
Sbjct: 549 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 608
Query: 247 ------------------FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
F M S+ C PN TY L+ A EGL +EA + +L
Sbjct: 609 KILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 668
Query: 289 GI 290
G+
Sbjct: 669 GV 670
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ Y + A + +++ + P Y +L+ A+C +G ++KA V +
Sbjct: 330 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEAN 389
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ Y S +DG +KGGN QKA+E+F R+K +P +Y +++ KA + A
Sbjct: 390 RLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 449
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ NEM ++ P+ YTAL +AR G E+A +F++++ + D+ AY AL++A
Sbjct: 450 RLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKA 509
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVD-AYGRAG 332
MH G + ++ +Y M+D AY RAG
Sbjct: 510 CCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAG 550
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 61/289 (21%)
Query: 95 TWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE 154
W+D+++ ++ P +++ + L+ A+ + KA + +R +PT
Sbjct: 347 VWEDMVSAGLK--------PDIVIYNI---LVHAFCKAGRMDKALGVLENIEANRLLPTI 395
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG------------ 202
+TY +L Y G ++KA VF ++ GL P V YNS + GL K
Sbjct: 396 ETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE 455
Query: 203 -----------------------GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
G+ +KA +FQRMK++ Y ++ +
Sbjct: 456 MLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGA 515
Query: 240 SFMALKLFNEMRSHKCKPNICTY-TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
A ++F ++ K N TY T L A+AR G EEAEE+ ++ G +PD YN
Sbjct: 516 MHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYN 575
Query: 299 ALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
+L+ AY +++ +PD +YN ++ Y +AG
Sbjct: 576 SLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGF 624
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
Query: 161 LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
LK +G + KA + EM K+G+ P+ ++Y +DG +GG+ A ++++ M
Sbjct: 297 LKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGL 356
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+P Y ++++ + KA + AL + + +++ P I TYT++++ + + G ++A E
Sbjct: 357 KPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALE 416
Query: 281 IFEQLQGAGIEPDVYAYNAL---------MEAYRLI--SRMHMGCEPDRASYNIMVDAYG 329
+F++++ AG+ P V +YN+L ME RL+ + G P Y + + Y
Sbjct: 417 VFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYA 476
Query: 330 RAG 332
R G
Sbjct: 477 RTG 479
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL-LKGGNPQKAVEIFQR 214
Y LLKA C SG + A VF+++ GL + + Y + +DG + G ++A E+
Sbjct: 502 AYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSA 561
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTALVNAFAR 271
M+RD +P T Y +IN YG + + L +M S + KP+I TY L+ +A+
Sbjct: 562 MERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQ 621
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G AEE+F+ L + PD + ALM
Sbjct: 622 AGFIPRAEELFQGLARLKLVPDATTWTALM 651
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 30/239 (12%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++ Y + A T+ + S P Y L+ AY + +E A A EM
Sbjct: 136 LLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQ 195
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + V+ S I G GN + A F++ K + P Y ++ Y +A
Sbjct: 196 GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETV 255
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFA-------------------REGLCEEAEEIFEQ 284
L +M + N+ YT ++N FA + G +A +I E+
Sbjct: 256 EALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEE 315
Query: 285 LQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ G+ P+ Y +M+ A+++ M G +PD YNI+V A+ +AG
Sbjct: 316 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAG 374
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 79/211 (37%), Gaps = 30/211 (14%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y LL+ Y G A A F MR + P+ +Y S I + + + AV
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M Q + + +I+ Y A + A F + ++ P Y ++V A+ +
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH------------- 311
G E E + Q++ G + ++ Y ++ + + +S H
Sbjct: 249 AGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAK 308
Query: 312 ----------MGCEPDRASYNIMVDAYGRAG 332
G P++ Y +++D Y R G
Sbjct: 309 ALDILEEMDKHGVSPNKMIYAMIMDGYARGG 339
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ GN K V FQ + + P Y L+++ Y + A F MR+ KPN+
Sbjct: 111 IDAGNWHKIVNAFQVIDK----PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNV 166
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG------ 313
YT+L++A+A E A E++ GI+ + + +++ Y
Sbjct: 167 HIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEK 226
Query: 314 -----CEPDRASYNIMVDAYGRAG 332
P YN +V AY +AG
Sbjct: 227 FKAENLVPGGIVYNSIVQAYCQAG 250
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 19/220 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L IE YG++ KAE + LL + PT TY ++K+Y +G L+ + +F+ +
Sbjct: 194 LQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDS 253
Query: 184 GLP---PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P P A +YN I K G ++A+ ++Q MKR+ + T+ ++ K+
Sbjct: 254 PSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLL----ACQKT 309
Query: 241 FM-ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ A +F ++++ K P++ +YTALVNA+A+ E A F+ + AGI P AYNA
Sbjct: 310 WKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNA 369
Query: 300 LMEAY----------RLISRMHM-GCEPDRASYNIMVDAY 328
L+ AY ++ +M GC P SY ++ AY
Sbjct: 370 LINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAY 409
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L++ AY + K E + + + + + Y L ++ Y +KAEAVF+ +
Sbjct: 158 FLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAEAVFQRLLT 217
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD---CCQPSTETYTLMINLYGKASK 239
G P+A Y + + + G IF+ + +P Y LMI+ YGK K
Sbjct: 218 TGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGK 277
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A+ ++ M+ + I T+ +L+ A + ++AE++F +LQ A ++PDV++Y A
Sbjct: 278 VEQAMSVYQSMKRERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDPDVFSYTA 334
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHEG 336
L+ AY R + G P + +YN +++AY + EG
Sbjct: 335 LVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEG 382
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K AE + +L ++ P +Y L+ AY + E A A F +M G+ P+ V YN+
Sbjct: 311 KDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNAL 370
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+ K +P+ A + ++MK++ C P+ E+YT +I+ Y + A + M+
Sbjct: 371 INAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADL 430
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+PN+ T+ L+ +A + FE ++ AG+EP+ + Y L+ AY
Sbjct: 431 QPNLQTFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAY 479
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 9/250 (3%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILL 125
A + + ++RE + TI F+SL TW D +V +L+ K DP V L
Sbjct: 281 AMSVYQSMKRERVALTIV-TFNSLLACQKTWKDAEDVFRKLQA-AKLDPDVFSYTA---L 335
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ AY + + A + +++ + PT+ Y L+ AY E A AV ++M++ G
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGC 395
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P+ Y S I + KA + RMK QP+ +T+ +++ Y +K ++
Sbjct: 396 TPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTGYANGNKLDNMMR 455
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
F M+ +PN YT LVNA+ + A ++Q+ G G +PD L++
Sbjct: 456 SFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGYKPDPILRTVLLK--- 512
Query: 306 LISRMHMGCE 315
I++ H E
Sbjct: 513 -IAKSHEQTE 521
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 20/196 (10%)
Query: 93 HATWDDLINVSV---QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR 149
HA +DD+I + Q+ N LI AY + + A ++ +
Sbjct: 349 HAAFDDMIAAGIRPTQVAYNA--------------LINAYAKCKDPEGARAVLKQMKQNG 394
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT ++Y L+ AY L+ KAE M++ L P+ + + G G +
Sbjct: 395 CTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTGYANGNKLDNMM 454
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ MK +P+ YT+++N YG A+ + +M KP+ T L+
Sbjct: 455 RSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGYKPDPILRTVLLKIA 514
Query: 270 AREGLCEEAEEIFEQL 285
E+ EEI E L
Sbjct: 515 KSH---EQTEEIHELL 527
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG+ L ++ + E+ D C P TY L+ +C + KA EM+ G
Sbjct: 293 LIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSG 352
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ ID L K Q+A++ M+R P+ TYT +I+ KA AL
Sbjct: 353 LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDAL 412
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL +EM + N+ TYT L++ +EG EAE++F + AG+ P++ Y AL+ +
Sbjct: 413 KLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGH 472
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 84/148 (56%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++ C G + A+++F +M++ GL P V YNS IDG K G ++ +F+ M
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEM 313
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K C+P TY +IN + K + A +EM++ KPN+ TY+ L++A +E +
Sbjct: 314 KDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHML 373
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++A + ++ G+ P+ + Y +L++A
Sbjct: 374 QQAIKFLLDMRRVGLSPNEFTYTSLIDA 401
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 11/189 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + L + G+LE+A F M ++ + P A N+++ L K G +
Sbjct: 178 CVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSN 237
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ F+ M S TY +MI K A LF++M+ P+I TY +L++ +
Sbjct: 238 KFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGY 297
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ GL +E+ +FE+++ G EPDV YNAL+ +A+ + M + G +P+
Sbjct: 298 GKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNV 357
Query: 319 ASYNIMVDA 327
+Y+ ++DA
Sbjct: 358 VTYSTLIDA 366
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P + L +G + + FR+M G+ S YN I + K G+ A
Sbjct: 212 RVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTA 271
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F +MK+ P TY +I+ YGK + LF EM+ C+P++ TY AL+N
Sbjct: 272 KSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINC 331
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPD 317
F + +A +++ +G++P+V Y+ L++A L+ +G P+
Sbjct: 332 FCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPN 391
Query: 318 RASYNIMVDAYGRAG 332
+Y ++DA +AG
Sbjct: 392 EFTYTSLIDANCKAG 406
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ Y GLL+++ +F EM+ G P + YN+ I+ K KA
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
MK +P+ TY+ +I+ K A+K +MR PN TYT+L++A +
Sbjct: 345 LHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCK 404
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRAS 320
G +A ++ +++ + +V Y L MEA L M G P+ +
Sbjct: 405 AGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464
Query: 321 YNIMVDAY 328
Y +V +
Sbjct: 465 YTALVHGH 472
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A ++ + ++A L++ P E TY L+ A C +G L A + EM +
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V Y + +DGL K G +A ++F+ M + P+ +TYT +++ + K + AL
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L E++ K KP++ Y ++ + EE E + +++ GI + Y M+AY
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAY 542
Query: 305 ----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
L+ M +G E ++ +++D + GL E Y
Sbjct: 543 FKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDY 589
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 97/256 (37%), Gaps = 67/256 (26%)
Query: 139 EFTYLELLDSRC--------IPTED------------TYALLLKAYCMSGLLEKAEAVFR 178
EFTY L+D+ C + D TY LL C G + +AE +FR
Sbjct: 392 EFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFR 451
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE---------------------------- 210
M K G+ P+ Y + + G +K + A+E
Sbjct: 452 AMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQN 511
Query: 211 -------IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ MK + ++ YT+ ++ Y K K+ AL L EM + I T+
Sbjct: 512 KLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFC 571
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY-----------NALMEAYRLISRMH- 311
L++ ++GL EEA + F ++ ++P+ A N + A +L M
Sbjct: 572 VLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQD 631
Query: 312 MGCEPDRASYNIMVDA 327
PD+ +Y ++D
Sbjct: 632 KNMVPDKIAYTALIDG 647
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S + + ++AY + +A E+ D T T+ +L+ C GL+E+A F
Sbjct: 532 SVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFA 591
Query: 179 EMRKYGLPPSAV-VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
M + L P+ V V + IDGL K + A ++F M+ P YT +I+ K
Sbjct: 592 RMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKH 651
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
AL + + M + ++ YT+LV ++ L ++A ++ G GI PD
Sbjct: 652 KDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
N ++ L+ ++F+ + R+ C P + + +++ + A + F+ M
Sbjct: 149 NFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRM 208
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
+ P + A + A+ G + + + F + GAGI V+ YN ++
Sbjct: 209 TRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
A L +M MG PD +YN ++D YG+ GL
Sbjct: 269 VTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGL 302
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY-ALLLKAYCMSGLLEKAEAVFREMRK 182
+LI+ +K L ++A + + D P L+ C + +E A+ +F EM+
Sbjct: 572 VLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQD 631
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+ P + Y + IDG LK + Q+A+ I RM + YT ++ + +
Sbjct: 632 KNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQ 691
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
A NEM P+ L+ + G +EA E+ ++L
Sbjct: 692 ARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDEL 734
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 13/223 (5%)
Query: 116 VLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKA 173
V S VS+ +LI+A + S A F + R C P TY L+ C G +A
Sbjct: 151 VRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEA 210
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ +F+EM G PS V Y+ + GL + GN +A+ +F +MK+ +P+ TY+ +++
Sbjct: 211 KELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDG 270
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K S A++L M + KPN+ TY+ L+N +EG EA E ++++ G++PD
Sbjct: 271 LCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPD 330
Query: 294 VYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMV 325
Y ++ EA + M +G P+R ++++ V
Sbjct: 331 AGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHV 373
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 12/217 (5%)
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
YG+ + A + ++ D C PT+ +Y + L+ A + ++ MR+ G+
Sbjct: 94 GYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQ 153
Query: 188 SAVVYNSYIDGLLKG-GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
S V N I L K G A EIF+ M + C P + TY +IN K K+F A +L
Sbjct: 154 SVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKEL 213
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
F EM + C P++ TY+ L++ + G +EA +F++++ IEP+V+ Y++LM
Sbjct: 214 FKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCK 273
Query: 302 -----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+ M +P+ +Y+ +++ + G
Sbjct: 274 NGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEG 310
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 143 LELLD----SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ELL+ R P TY+ L+ C G L +A M+ GL P A +Y I+G
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIING 340
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL----------YGKASKSFMALKLFN 248
Q+A M P+ T++L + L G ++SF +L+
Sbjct: 341 FCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSF---QLYI 397
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
MR+ + T+ +LV F ++G +A IF+++ G PD ++A++ +
Sbjct: 398 GMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGF 453
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 170 LEKAEAVFREMR---KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
L KA+ +F G + I L+ + A E+ RMK + C+ + E
Sbjct: 28 LRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEI 87
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ + YG+ A+++F++M CKP +Y ++ E + A ++ ++
Sbjct: 88 FLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMR 147
Query: 287 GAGIEPDVYAYNALME-----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
G+ V + N L++ A+ + M GC+PD +Y +++ + G
Sbjct: 148 EMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLG 205
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVY-------NSYIDGLLKGGN 204
P Y ++ +C ++A EM + P+ V + N + GL GN
Sbjct: 329 PDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGN 388
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++ +++ M+ T+ ++ + K A ++F+EM C P+ ++A
Sbjct: 389 LNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSA 448
Query: 265 LVNAF-AREGLCEEAEEIFEQLQGAGIE 291
+V F R + E E I +L +E
Sbjct: 449 VVGGFWDRRKVREAFESIVVELMNEFVE 476
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY ++K C G A + ++M + G P V YN+ ID L K +A+
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ TY+ +++ + + A LF +M PN T+T LV+ +
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG+ EA +FE + G+EPD Y Y+ALM+ Y L S+M G P
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353
Query: 321 YNIMVDAYGRA-GLHEGK 337
YNI+++ + ++ L+E K
Sbjct: 354 YNILINGHCKSRRLNEAK 371
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T+ LL C + A +F E+ K G PS + Y + I GL K G+ A+++
Sbjct: 139 PTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQL 198
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++M+ C+P Y +I+ K ++ A+ F+EM PN+ TY+++++ F
Sbjct: 199 LKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCN 258
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRAS 320
G EA +F+Q+ G + P+ + L +EA R+ M G EPD +
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318
Query: 321 YNIMVDAY 328
Y+ ++D Y
Sbjct: 319 YSALMDGY 326
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 89 LPPTHATWDDLIN----VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT-YL 143
L PTH T+ L+N + + K +D I M L+ K L K T L
Sbjct: 137 LQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNAL 196
Query: 144 ELL----DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+LL + C P Y ++ + C +A F EM G+PP+ V Y+S + G
Sbjct: 197 QLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGF 256
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G +A +F++M P+T T+T++++ K A ++F M + +P+
Sbjct: 257 CNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDA 316
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
TY+AL++ + + +EA+++F+ + G G P V YN L+ EA L+S
Sbjct: 317 YTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSE 376
Query: 310 MH-MGCEPDRASYNIMVDAYGRAG-------LHEGKCSYSLVELSVKH 349
M+ PD +Y+ ++ + +AG L + CSY L+ S+ +
Sbjct: 377 MYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITY 424
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y +S +A+ + ++ P+ Y +L+ +C S L +A+ + EM
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ + G + G PQ A ++F+ M P + TY+++++ K A
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L M+ K +P+IC Y L+ G E A E+F L GI+P V Y ++
Sbjct: 442 RLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGL 501
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA + +M + GC P+ +YN+ + + R G
Sbjct: 502 LKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNG 540
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + +A+ E+ D P TY+ L++ +C +G + A+ +F+EM Y
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P ++ Y+ +DGL K G+ +A + + M+ +P Y ++I K A
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+ + +P++ TYT +++ +EGL EA E+F ++ G P+ YN ++
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVD 326
+ RLI M G D +++ +++D
Sbjct: 536 FLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ ++ + +A + + ++ P TY+ L+ YC+ +++A+ +F M
Sbjct: 286 ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS VYN I+G K +A + M P T TY+ ++ + +A + +A
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVA 405
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
KLF EM S+ P+ TY+ L++ + G +EA + + +Q + IEP + YN L++
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQG 465
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKC 338
A L S + + G +P +Y +M+ + GL C
Sbjct: 466 MCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A + + E++D P TY+ +L +C G L +A ++F++M + P+ V +
Sbjct: 228 NEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTIL 287
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+DGL K G +A +F+ M + +P TY+ +++ Y S+ A KLF+ M
Sbjct: 288 VDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
P++ Y L+N + EA+ + ++ + PD Y+ LM+ + +
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L M G PD +Y+I++D + G
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHG 435
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 152 PTEDTYALLLKAYCMSGL--LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P T +L+ C S + A + +M K GL P+ V + + ++GL AV
Sbjct: 102 PNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV 161
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++F + + PS TYT +I K + AL+L +M CKP++ Y ++++
Sbjct: 162 KLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSL 221
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCE 315
++ EA F ++ GI P+V Y++++ + ++I R M
Sbjct: 222 CKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM--- 278
Query: 316 PDRASYNIMVDAYGRAGL 333
P+ ++ I+VD + G+
Sbjct: 279 PNTVTFTILVDGLCKEGM 296
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ TY +++ GL +A +FR+M G P++ YN I G L+ G+P AV +
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRL 548
Query: 212 FQRMKRDCCQPSTETYTLMINL 233
+ M + T+ ++++L
Sbjct: 549 IEEMVGRGFSADSSTFQMLLDL 570
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Query: 134 LHKKAEFTYL-ELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L KK + T + +L+D+ C+P E TY L+ C+ G L+KA ++ M P+
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
V Y + I+GL+K AV + M+ + Y+++I+ K K+ A+ L+
Sbjct: 327 DVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------- 301
+M CKPNI Y+ LV+ REG EA+EI ++ +G P+ Y Y++LM
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Query: 302 ---EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA ++ M GC ++ Y++++D G
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I+A + +A + + + +C+P TY L+ C +++A + EM+
Sbjct: 192 LVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSE 251
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN---LYGKASKS 240
G PS V+YN IDGL K G+ + ++ M C P+ TY +I+ L GK K
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK- 310
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ L M S KC PN TY L+N ++ +A + ++ G + + Y+ L
Sbjct: 311 --AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ EA L +M GC+P+ Y+++VD R G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 16/235 (6%)
Query: 107 RLNKKWDPIVLMSCVSI-----LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLL 161
R+ K D + L CV LI K KA ++ S+CIP + TY L+
Sbjct: 275 RVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLI 334
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ 221
A + M + G + +Y+ I GL K G ++A+ ++++M C+
Sbjct: 335 NGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 394
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P+ Y+++++ + K A ++ N M + C PN TY++L+ F + GLCEEA ++
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Query: 282 FEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
++++ G + + Y+ L+ EA + S+M +G +PD +Y+ ++
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 120/262 (45%), Gaps = 27/262 (10%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVLMSC-----------VSILLIEAYGQKSLHKKAE 139
P T+ LIN V+ R + D + L+S + +LI ++ ++A
Sbjct: 325 PNDVTYGTLINGLVKQR--RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ ++ + C P Y++L+ C G +A+ + M G P+A Y+S + G
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G ++AV++++ M + C + Y+++I+ + A+ ++++M + KP+
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQL---QGAGIEPDVYAYNALMEAYRL---ISR---- 309
Y++++ G + A +++ ++ + +PDV YN L++ + ISR
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 310 ----MHMGCEPDRASYNIMVDA 327
+ GC+PD + N ++
Sbjct: 563 LNSMLDRGCDPDVITCNTFLNT 584
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P ++ L++KA C +++A VFR M + P Y + +DGL K +AV +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ + C PS Y ++I+ K KL + M C PN TY L++
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+G ++A + E++ + P+ Y L+ +A RL+S M G ++
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 321 YNIMVDAYGRAGLHE 335
Y++++ + G E
Sbjct: 365 YSVLISGLFKEGKAE 379
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 16/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDS-RCIPTEDTYALLLKAYCMSGL----LEKAEAVF 177
I++ AYG+ L KA + ++D RC + ++ +L GL LE + V
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
+ P+ + +N I L K +A+E+F+ M C P TY +++ K
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A+ L +EM+S C P+ Y L++ ++G ++ + + G P+ Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 298 NALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
N L+ +A L+ RM C P+ +Y +++
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L IE YG++ KAE + LL + PT TY ++K+Y +G L+ + +F+ +
Sbjct: 194 LQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDS 253
Query: 184 GLP---PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P P A +YN I K G ++A+ ++Q MKR+ + T+ ++ K+
Sbjct: 254 PSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLL----ACQKT 309
Query: 241 FM-ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ A +F ++++ K P++ +YTALVNA+A+ E A F+ + AGI P AYNA
Sbjct: 310 WKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNA 369
Query: 300 LMEAY----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
L+ AY ++ +M GC P SY ++ AY L
Sbjct: 370 LINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNL 414
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ AY + K E + + + + Y L ++ Y +KAEAVF+ +
Sbjct: 159 LVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT 218
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD---CCQPSTETYTLMINLYGKASKS 240
G P+A Y + + + G IF+ + +P Y LMI+ YGK K
Sbjct: 219 GPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKV 278
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ ++ M+ + I T+ +L+ A + ++AE++F +LQ A ++PDV++Y AL
Sbjct: 279 EQAMSVYQSMKRERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDPDVFSYTAL 335
Query: 301 MEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHEG 336
+ AY R + G P + +YN +++AY + EG
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEG 382
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K AE + +L ++ P +Y L+ AY + E A A F +M G+ P+ V YN+
Sbjct: 311 KDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNAL 370
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+ K +P+ A + ++MK++ C P+ E+YT +I+ Y + A + M+
Sbjct: 371 INAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADL 430
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLI 307
+PN+ T+ L+ +A + FE ++ AG+EP+ + Y L+ AY +I
Sbjct: 431 QPNLQTFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAII 490
Query: 308 SRMHM---GCEPD 317
M GC+PD
Sbjct: 491 WYKQMLGTGCKPD 503
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 9/250 (3%)
Query: 66 AQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILL 125
A + + ++RE + TI F+SL TW D +V +L+ K DP V L
Sbjct: 281 AMSVYQSMKRERVALTIV-TFNSLLACQKTWKDAEDVFRKLQA-AKLDPDVFSYTA---L 335
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ AY + + A + +++ + PT+ Y L+ AY E A AV ++M++ G
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGC 395
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P+ Y S I + KA + RMK QP+ +T+ +++ Y +K ++
Sbjct: 396 TPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMTGYANGNKLDNMMR 455
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
F M+ +PN YT LVNA+ + A ++Q+ G G +PD L++
Sbjct: 456 SFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGCKPDPILRTVLLK--- 512
Query: 306 LISRMHMGCE 315
I++ H E
Sbjct: 513 -IAKSHEQTE 521
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 20/196 (10%)
Query: 93 HATWDDLINVSV---QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR 149
HA +DD+I + Q+ N LI AY + + A ++ +
Sbjct: 349 HAAFDDMIAAGIRPTQVAYNA--------------LINAYAKCKDPEGARAVLKQMKQNG 394
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT ++Y L+ AY L+ KAE M++ L P+ + + G G +
Sbjct: 395 CTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMTGYANGNKLDNMM 454
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+ MK +P+ YT+++N YG A+ + +M CKP+ T L+
Sbjct: 455 RSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGCKPDPILRTVLLKIA 514
Query: 270 AREGLCEEAEEIFEQL 285
E+ EEI E L
Sbjct: 515 KSH---EQTEEIHELL 527
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K +K A KLF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 109 NKKWDPIVLMSCVS-----ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKA 163
NK +D +++ + V LI+ + + A Y ++L +P TY L+
Sbjct: 232 NKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
C G L++A + EM GL P + Y + IDG K G+ A E +RM ++ +
Sbjct: 292 LCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 351
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
YT +I+ + +S A K+ EM S KP+ TYT ++N F ++G + ++ +
Sbjct: 352 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 411
Query: 284 QLQGAGIEPDVYAYNALMEA 303
++Q G P V YN LM
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI +++ A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M QP TYT +I+ K
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM L P+ V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTY 262
A+EI+++M P TY +I YG K + A L +EM +P+ TY
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLI--YGLCKKGDLKQANDLIDEMSMKGLQPDKITY 320
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
T L++ +EG + A E +++ I D AY AL+ +A +++ M
Sbjct: 321 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD +Y ++++ + + G
Sbjct: 381 VGLKPDARTYTMIINEFCKKG 401
>gi|413953459|gb|AFW86108.1| hypothetical protein ZEAMMB73_051838 [Zea mays]
Length = 388
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
KA + EM + G PP Y S ID L K A E+FQ +K +C S Y +MI
Sbjct: 29 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 88
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
GKA + A+ +F+EM C P++ Y AL++ AR G+ +EA ++Q G
Sbjct: 89 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMIDEALSTMRRMQEHGCI 148
Query: 292 PDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
PD+ +YN ++ A ++S M PD SYN ++ A AG+ E
Sbjct: 149 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVSPDVVSYNTVLGALSHAGMFE 203
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 93/179 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 52 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 111
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + GL + G +A+ +RM+ C P +Y +++N K A+
Sbjct: 112 CAPDVYAYNALMSGLARTGMIDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 171
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ + M+ P++ +Y ++ A + G+ EEA ++ +++ G E D+ Y++++EA
Sbjct: 172 EMLSNMKQSTVSPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA 230
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 54/120 (45%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + +A T + + CIP ++Y ++L +G +A + M++
Sbjct: 122 LMSGLARTGMIDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 181
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + L G ++A ++ + M + TY+ ++ GK+ ++ +
Sbjct: 182 VSPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKSEEAIATI 241
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
LEL P T+A L+K C +G E+ + ++M++ G P+ Y + +D +
Sbjct: 219 LELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCRE 278
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A +I M P T T+++N Y + + A+++F MR C+PN+ TY
Sbjct: 279 QKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTY 338
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH- 311
A+V F G +A + +Q++ G+EPDV YN L+ A+RL+ M
Sbjct: 339 NAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEG 398
Query: 312 MGCEPDRASYNIMVDAYGRAGLHEGKCS 339
G D+ +YN+++DA + G + CS
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACS 426
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT YA L+ +C E+AE + EM GL P V ++ + G AV +
Sbjct: 263 PTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRV 322
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ C+P+ TY ++ + A K + A+ L ++MR +P++ TY L+
Sbjct: 323 FESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRAS 320
+G A + ++G G+ D Y YN L++A ++ C P+ +
Sbjct: 383 DGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVT 442
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+N +++ +AG + C++ +S + P
Sbjct: 443 FNTVINGLCKAGKFDVACTFLENMISAGYAP 473
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + ++ ++AE E+ DS +P T +++ AYC G + A VF MR G
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN---LYGKASKSF 241
P+ YN+ + G G KA+ + +M+ +P TY L+I + G +F
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L+L M + + TY L++A + G +EA +F+ L+ GI P+ +N ++
Sbjct: 391 RLLRL---MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447
Query: 302 EAYRLISRMHMGC 314
+ + C
Sbjct: 448 NGLCKAGKFDVAC 460
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 108 LNKKWDPIVLMSCV--SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
LN+ +D LM CV +++ AY ++ A + + C P TY +++ +C
Sbjct: 288 LNEMFDS-GLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC 346
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
+G + KA A+ +MR+ G+ P V YN I G G+ A + + M+ +
Sbjct: 347 NAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQY 406
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY ++I+ K K A LF+ + +PN T+ ++N + G + A E +
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466
Query: 286 QGAGIEPDVYAYNALME 302
AG PD Y Y+ +E
Sbjct: 467 ISAGYAPDTYTYSPFIE 483
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 77/251 (30%)
Query: 152 PTEDTYALLLKA-----------------------------------YCMSGLLEKAEAV 176
PT TY L++A YC + LE A +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF------------------------ 212
F +M G AV Y + I+G + G +A+E+F
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRG 246
Query: 213 -------QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
Q+MK +P+T Y +++L+ + K+ A K+ NEM P + T T +
Sbjct: 247 EEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIV 306
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGC 314
VNA+ REG A +FE ++ G EP+V+ YNA+++ + L+ +M G
Sbjct: 307 VNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGV 366
Query: 315 EPDRASYNIMV 325
EPD +YN+++
Sbjct: 367 EPDVVTYNLLI 377
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ C +G + A M G P Y+ +I+ L K Q+ +
Sbjct: 438 PNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFF 497
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + +PST YT++IN +A +++ +M S C P++ TYT V A+
Sbjct: 498 IDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCN 557
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
EG +EAE + +++ D AYN L++ + I +
Sbjct: 558 EGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL++ C+ G + A + R M GL YN ID L K G +A +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F ++ +P++ T+ +IN KA K +A M S P+ TY+ + +
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCK 487
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM------EAYRLISRM-----HMGCEPDRAS 320
+E +++ ++P Y ++ Y L +R+ GC PD +
Sbjct: 488 TKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVT 547
Query: 321 YNIMVDAYGRAG 332
Y V AY G
Sbjct: 548 YTTSVRAYCNEG 559
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY ++AYC G L++AE V EM+K A+ YN+ IDG G
Sbjct: 535 QMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIG 594
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMI----------NLYGKASKSFMAL------KLF 247
+AV I + M P+ T+ +++ ++ KA+ + + +LF
Sbjct: 595 QTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELF 654
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
M+ + + TY +++ F+ E +E + ++ + + YNAL+ +
Sbjct: 655 ELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCF 711
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 13/179 (7%)
Query: 161 LKAYCMSGLLEKAEA--VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
LKA + +E A+ +F M+K +P SA Y S ++G + + + MK +
Sbjct: 636 LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEE 695
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+ + Y ++N + K A L M H PN+ Y L++ EG + A
Sbjct: 696 NLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRA 755
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVD 326
+EIF + D + +++ + +IS + M C+P +Y ++ +
Sbjct: 756 KEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Query: 141 TYLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
T+LE ++ + P TY+ ++ C + ++ EM + + PS V Y I+ L
Sbjct: 461 TFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRL 520
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
N A I+ +M C P TYT + Y + A + EM+ + +
Sbjct: 521 FNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDA 580
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
Y L++ G + A I + + G P+ + +
Sbjct: 581 MAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
ED Y L+ +C + A A+ M +G P+ + Y + GL G +A EIF+
Sbjct: 701 EDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFR 760
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+ + ++I+ + + + M + + + KCKP+ TY L
Sbjct: 761 SSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLT 813
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y LL G ++A+ +FR R +V+ IDG ++ G+ +
Sbjct: 733 LPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHD 792
Query: 211 IFQRMKRDCCQPSTETYTLM 230
+ +++ C+PS ETY ++
Sbjct: 793 MISMLEQMKCKPSDETYAML 812
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Vitis vinifera]
Length = 1071
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 134/308 (43%), Gaps = 31/308 (10%)
Query: 51 GSGFVDGIFPVLSPTAQQILRFVQREVDSNTIWDAF-DSLPPTHATWDDLINVSVQL-RL 108
G G G+ + S + + + + N I +F D L ++ IN + RL
Sbjct: 737 GKGIELGVVSI-SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRL 795
Query: 109 ---NKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLD-SRCIPT-----E 154
N +D +V + + +I YG+ KA +E+ + +RC E
Sbjct: 796 HFANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKA----VEMFNKARCSGVGVSLDE 851
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY L+ Y +G +A +FREM++ G+ P V YN I+ G +A E+FQ
Sbjct: 852 KTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQA 911
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M RD C P + TY +I Y ++ K A + M++ P+ + L++AFA+ G
Sbjct: 912 MLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAKAGF 971
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMGCEPDRASYNIM 324
EEAE ++ L AG+ PDV Y ++ Y ++ EPDR +
Sbjct: 972 TEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPDRFIMSSA 1031
Query: 325 VDAYGRAG 332
V Y AG
Sbjct: 1032 VHFYKLAG 1039
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++ + +KSLH K + E++D +P TY +++ + GL+E++ F EM+
Sbjct: 267 FMLSSLQKKSLHGKVIDLWREMVDKGVVPNSFTYTVVISSLVKDGLVEESFKTFYEMKNL 326
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ I K GN +A+++++ M+ PS T ++ LY K A
Sbjct: 327 GFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRA 386
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ LF+EM +K + Y L+ + + GL E+AE+ F++ + G+ + Y A+ +
Sbjct: 387 VSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQV 446
Query: 304 Y 304
+
Sbjct: 447 H 447
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 14/241 (5%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
++L + P V+ V +L+ YGQ K AE +LE+L++ C P E +L Y
Sbjct: 182 MKLQLSYQPSVI---VYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYA 238
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
G + + + +++ G+ PS V+N + L K K +++++ M P++
Sbjct: 239 RWGRHKAMLSFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREMVDKGVVPNSF 298
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TYT++I+ K + K F EM++ P TY+ L++ ++ G +EA +++E +
Sbjct: 299 TYTVVISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDM 358
Query: 286 QGAGIEPDVYAYNALMEAY----------RLISRMHMG-CEPDRASYNIMVDAYGRAGLH 334
+ I P Y +L+ Y L S M D Y +++ YG+ GL+
Sbjct: 359 RYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLY 418
Query: 335 E 335
E
Sbjct: 419 E 419
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 125 LIEAYGQKSLHKKA--EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI YG++ KKA F+ +E C + Y ++ AY G E+A ++ E+
Sbjct: 682 LITLYGKQHKLKKAIEVFSAIE----GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTG 737
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ V + + L G Q+A + +R D + T Y IN A +
Sbjct: 738 KGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHF 797
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ--GAGIEPDVYAYNAL 300
A +++ M S P+I TY +++ + R ++A E+F + + G G+ D Y L
Sbjct: 798 ANSIYDRMVSLGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNL 857
Query: 301 MEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLH 334
+ Y + H G +P + SYNIM++ Y AGLH
Sbjct: 858 ISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLH 902
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 8/234 (3%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+V S ++I + + L +++ T+ E+ + +P E TY+LL+ +G ++A
Sbjct: 293 VVPNSFTYTVVISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAI 352
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
++ +MR + PS S + K G+ +AV +F M+++ Y L+I +Y
Sbjct: 353 KLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIY 412
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GK A K F E N TY A+ G E+A I E ++ I
Sbjct: 413 GKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSR 472
Query: 295 YAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
++Y L++ Y + + D AS A + GL + ++ L +K
Sbjct: 473 FSYIVLLQCYVM--------KEDLASAEATFQALSKTGLPDAGSCNDMLNLYIK 518
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 22/229 (9%)
Query: 91 PTHATWDDLINVS---------VQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFT 141
P T+ LI++S ++L + ++ IV + L+ Y + + +A
Sbjct: 330 PEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCASLLTLYYKNGDYSRAVSL 389
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ ++ + E Y LL++ Y GL E AE F+E + GL + Y + L
Sbjct: 390 FSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLN 449
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKASKSFMALKLFNEMRSHKC 255
GN +KA+ I + M+ S +Y +++ Y A +F AL S
Sbjct: 450 SGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLASAEATFQAL-------SKTG 502
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P+ + ++N + + L E+A++ Q++ +E D+ +M+ Y
Sbjct: 503 LPDAGSCNDMLNLYIKLDLLEKAKDFIFQIRKDPVEFDMELCKTVMKVY 551
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 100/264 (37%), Gaps = 76/264 (28%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGL--------PPSAVVYN-----SYIDGLLKG---- 202
++K YC G+L A+ + +EM GL S V++ Y+D ++
Sbjct: 547 VMKVYCKKGMLRDAKQLIQEMGTNGLFKDSEFIQTLSLVMHEESERPDYVDDTVEALNQN 606
Query: 203 ---------------GNPQKAVEIFQRMKRDCCQPSTETYTL------------------ 229
GN K EI + + + S ++ +
Sbjct: 607 NTLALELMLGLYSEVGNACKVEEILKMLLKTAGGLSVASHLISKFTREGDISKAQNLNDQ 666
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNI--------CT-----YTALVNAFAREGLCE 276
++ L A + +A + + HK K I CT Y ++++A+A+ G E
Sbjct: 667 LVKLGRGAEDASIASLITLYGKQHKLKKAIEVFSAIEGCTSGKLIYISMIDAYAKCGKAE 726
Query: 277 EAEEIFEQLQGAGIEPDVYA----------YNALMEAYRLISR-MHMGCEPDRASYNIMV 325
EA ++E++ G GIE V + Y EA +I R G E D +YN +
Sbjct: 727 EAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFI 786
Query: 326 DAYGRAG-LHEGKCSYS-LVELSV 347
+A AG LH Y +V L V
Sbjct: 787 NAMLGAGRLHFANSIYDRMVSLGV 810
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y + L + AEF E+ S +P E TY+LL+ AY + E A V +EM
Sbjct: 347 LLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASN 406
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A V++ + G QK ++ + M+ +P Y ++I+ +GK + A+
Sbjct: 407 VQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAM 466
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+ M S +P+ T+ LV+ + G + AEE+FE++ G P +N ++ ++
Sbjct: 467 ATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSF 526
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
L++ M G P+ +Y ++D YG++G
Sbjct: 527 GDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSG 565
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 17/182 (9%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G E+AEA+F EMR GL P YN+ + G +K G + A + M+R P+ +TY
Sbjct: 320 GRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTY 379
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+L+I+ YG A + A + EM + +PN ++ ++ ++ +G ++ ++ +++
Sbjct: 380 SLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMED 439
Query: 288 AGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
+G+ PD YN L++ + R++S G EPD ++N +VD + +AG
Sbjct: 440 SGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSE---GIEPDTITWNTLVDCHCKAGK 496
Query: 334 HE 335
H+
Sbjct: 497 HD 498
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ +Y K +K E+ DS P Y +L+ + L+ A A F M G
Sbjct: 417 ILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEG 476
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + +N+ +D K G +A E+F+ M P T+ +MIN +G +
Sbjct: 477 IEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVK 536
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L MRS PN TYT L++ + + G ++A E + ++ AG++P YNAL+ AY
Sbjct: 537 NLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAY 596
Query: 305 --RLISRMHM---------GCEPDRASYNIMVDAYGR 330
R +S + G +P + N +++A+G+
Sbjct: 597 AQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGK 633
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + H +AE + E+++ +P T+ +++ ++ + + + MR G
Sbjct: 487 LVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQG 546
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+AV Y + ID K G A+E MK +PS+ Y ++N Y + S A+
Sbjct: 547 LLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAV 606
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F MR KP++ +L+NAF ++ EA + + ++ ++PDV Y LM+A
Sbjct: 607 SAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKAL 666
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
L+ + GC PDR + ++ A
Sbjct: 667 ILVEKFDKVPSVYEEMILSGCTPDRKARAMLRSA 700
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 11/227 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG + A E+ S P ++ +L +Y G +K V REM
Sbjct: 381 LLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS 440
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN ID K A+ F RM + +P T T+ +++ + KA K A
Sbjct: 441 GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRA 500
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF EM P T+ ++N+F + ++ + + ++ G+ P+ Y L++
Sbjct: 501 EELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDI 560
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCS 339
Y R G +P YN +++AY + GL + S
Sbjct: 561 YGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVS 607
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ +I G ++AE + E+ D+ P Y LL+ Y +GLL AE V EM +
Sbjct: 310 VTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMER 369
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASK 239
G+ P+ Y+ ID + A + + M+ QP+ ++ ++ Y G+ K
Sbjct: 370 SGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQK 429
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+F L+ EM +P+ Y L++ F + + A F+++ GIEPD +N
Sbjct: 430 TFQVLR---EMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNT 486
Query: 300 LME----------AYRLISR-MHMGCEPDRASYNIMVDAYG 329
L++ A L M G P ++NIM++++G
Sbjct: 487 LVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFG 527
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I ++G + + + +P TY L+ Y SG + A +M+
Sbjct: 521 IMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAA 580
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS+ +YN+ ++ + G +AV F M+ D +PS +IN +GK + A
Sbjct: 581 GLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEA 640
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ + KP++ TYT L+ A ++ ++E++ +G PD A L A
Sbjct: 641 FVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPDRKARAMLRSA 700
Query: 304 YR 305
+
Sbjct: 701 LK 702
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI A GQ +A LL + T TY L+ A + +EKA + MR+
Sbjct: 174 ILIHALGQSEKLYEAF-----LLSQKQNLTPLTYNALISACARNNDIEKALNLICRMRED 228
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAV--EIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P V Y+ I L+K ++ +I++ + RD + + + +I + KA
Sbjct: 229 GYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLD 288
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
AL+ ++ T ++ G EEAE IFE+++ G++P AYNAL+
Sbjct: 289 KALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALL 348
Query: 302 EAYR----------LISRMHM-GCEPDRASYNIMVDAYGRA 331
Y ++S M G P+ +Y++++DAYG A
Sbjct: 349 RGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNA 389
>gi|413953460|gb|AFW86109.1| hypothetical protein ZEAMMB73_051838 [Zea mays]
Length = 240
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
KA + EM + G PP Y S ID L K A E+FQ +K +C S Y +MI
Sbjct: 29 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 88
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
GKA + A+ +F+EM C P++ Y AL++ AR G+ +EA ++Q G
Sbjct: 89 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMIDEALSTMRRMQEHGCI 148
Query: 292 PDVYAYNALME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRAGLHE 335
PD+ +YN ++ A ++S M PD SYN ++ A AG+ E
Sbjct: 149 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVSPDVVSYNTVLGALSHAGMFE 203
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ + A + EL ++ + YA+++K +G L+ A +F EM K G
Sbjct: 52 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 111
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN+ + GL + G +A+ +RM+ C P +Y +++N K A+
Sbjct: 112 CAPDVYAYNALMSGLARTGMIDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 171
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ + M+ P++ +Y ++ A + G+ EEA ++ +++ G E D+ Y++++EA
Sbjct: 172 EMLSNMKQSTVSPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA- 230
Query: 305 RLISRMHMGCEP 316
I ++ C+P
Sbjct: 231 --IGKVDHECDP 240
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 16/233 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG+ ++A + E+LD+ PT +Y +LL A+ +SGL+++A VF+ MR++
Sbjct: 320 LLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRH 379
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P Y + + + + A + F+R+K D +P+ Y ++ Y K +
Sbjct: 380 RVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKV 439
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
++++ MR +PN YT +++A R A F++++ G PD A N L+
Sbjct: 440 MRVYERMRIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGYPPDQKAKNILLSL 499
Query: 302 --------EAYRLISR--MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
EA L+ + + +PD N VD G +H S+ L++
Sbjct: 500 ANTPEEQQEANELVGNGAIQLEVKPD----NEEVDDDGHEVIHTDAGSHRLLD 548
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 94/330 (28%)
Query: 108 LNKK-WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
+NKK + P V+ L+EAYG+ ++KAE + + S P+ TY ++LK+
Sbjct: 166 MNKKGYQPSVISQTG---LMEAYGRGKQYRKAEAVFRRMQTSGPEPSPVTYQIILKSLVE 222
Query: 167 SGLLEKAEAVFR--------------------------------------EMRKYGLPPS 188
++AEA+F +M + +P S
Sbjct: 223 GDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERKIPLS 282
Query: 189 AVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
V +NS L+ K V I+ +M+R +P +Y+L+I YGKA + AL +F
Sbjct: 283 TVTFNS----LMSFETDYKEVSSIYDQMQRAGMKPDVVSYSLLIKAYGKARREEEALAVF 338
Query: 248 NE-----------------------------------MRSHKCKPNICTYTALVNAFARE 272
E MR H+ +P++C+YT +V A+
Sbjct: 339 EEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRVEPDLCSYTTMVLAYVNA 398
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASY 321
AE+ F +++ G++P+V Y LM+ Y R+ RM + G EP++ Y
Sbjct: 399 SDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRVYERMRIQGVEPNQTIY 458
Query: 322 NIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
++DA+GR G E+ + YP
Sbjct: 459 TTIMDAHGRNSDF-GNAVIWFKEMEARGYP 487
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 52/230 (22%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E + +L+ AY G +AE V + M K G PS + ++ +G +KA +F
Sbjct: 139 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVF 198
Query: 213 QRM--------------------------------------KRDCCQPSTETYTLMINLY 234
+RM KR +P + + +MI +Y
Sbjct: 199 RRMQTSGPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMY 258
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
KA A KLF +M K + T+ +L++ E +E I++Q+Q AG++PDV
Sbjct: 259 KKAGDYAQARKLFAQMSERKIPLSTVTFNSLMSF---ETDYKEVSSIYDQMQRAGMKPDV 315
Query: 295 YAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGL 333
+Y+ L++AY R + G P R SYNI++DA+ +GL
Sbjct: 316 VSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGL 365
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
LE+ + +P TY+ + Y +G LE A ++ EM+ G+ V YN+ + K
Sbjct: 352 LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKL 411
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G + A+++ + M + TY +++ YGK K ++F EM+ + PN+ TY
Sbjct: 412 GRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTY 471
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-H 311
+ L++ +++ L EEA E+F + + AG++ DV Y+ L+ A L+ M
Sbjct: 472 STLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTK 531
Query: 312 MGCEPDRASYNIMVDAYGRAGLHE 335
G P+ +YN ++DA+GR+ E
Sbjct: 532 EGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVEIFQRM 215
++ L+ AY SG ++A VF M+ GL P+ V YN+ ID KGG ++ VEIF+ M
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R+ QP TY ++ + + A LFNEM ++ TY L++A + G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
+ A EI ++ G I P+V Y+ + + Y R+ +G DR SYN +
Sbjct: 345 DLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTL 404
Query: 325 VDAYGRAGLHE 335
+ Y + G E
Sbjct: 405 LSIYAKLGRFE 415
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 80 NTIWDAFDSLPPTHAT---WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLH- 135
NT++ AF +L + +D+ I V ++++ +V + V I+A G+ +
Sbjct: 220 NTVF-AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAV----IDACGKGGVEF 274
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+ + E+L + P TY LL GL E A +F EM G+ YN+
Sbjct: 275 KRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTL 334
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D + KGG A EI M P+ TY+ M + Y KA + AL L+NEM+
Sbjct: 335 LDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------RLISR 309
+ +Y L++ +A+ G E+A ++ +++ +G++ DV YNAL++ Y ++R
Sbjct: 395 GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTR 454
Query: 310 MHMGCEPDRA-----SYNIMVDAYGRAGLHE 335
+ + DR +Y+ ++D Y + L+E
Sbjct: 455 VFKEMKKDRVFPNLLTYSTLIDVYSKGSLYE 485
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 109/284 (38%), Gaps = 72/284 (25%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG++ + + E+ R P TY+ L+ Y L E+A VFRE ++ G
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA------- 237
L V+Y+ I+ L K G AV + M ++ +P+ TY +I+ +G++
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558
Query: 238 ------------SKSFM----------------ALKLFNEMRSHK--------------- 254
S +FM K + ++ S K
Sbjct: 559 DGVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIR 618
Query: 255 -------------CKPNICTYTALVNAFAREGLCEEAEEIFEQL-----QGAGIEPDV-- 294
KPN+ T++A++NA +R E+A + E+L Q G+ +
Sbjct: 619 SILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLM 678
Query: 295 -YAYNALMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++ N ++A L + M A YN + D G G
Sbjct: 679 GFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRG 722
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAE-----AVFREMRKYGLPPSAVVYNSYIDGLL 200
+S+ +ED Y LL+ G KA A+ RE RK + ++ I L
Sbjct: 143 FESKLCGSED-YTFLLRELGNRGECWKAIRCFDFALVREGRK---NERGKLASAMISTLG 198
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + A +F+ + + ++ +I+ YGK+ A+K+F M+ KPN+
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLV 258
Query: 261 TYTALVNAFAREGL-CEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYR-LISR 309
TY A+++A + G+ + EIFE++ G++PD YN+L+ EA R L +
Sbjct: 259 TYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNE 318
Query: 310 M-HMGCEPDRASYNIMVDAYGRAG 332
M G + D +YN ++DA + G
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGG 342
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI+ G+ K +A +F S + ++AL++A+ + G +EA ++FE ++ +G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 290 IEPDVYAYNALMEA--------YRLI----SRMHMGCEPDRASYNIMVDAYGRAGLHEG 336
++P++ YNA+++A R++ + G +PDR +YN ++ R GL E
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEA 311
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD R P TY+ ++ A C ++KA V M K G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YNS + G P++A+ ++M+ D +P TY +++ K +S A
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F+ M +P+I TY L+ +A +G E + + + GI PD + +N L+
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA + S+M G P+ +Y ++ ++G
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ + G +KA + + EM + P V Y+S I L KG KA+E+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P+ TY +++ Y + + A+ +MRS +P++ TY +L++ +
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHM--------GCEPDRAS 320
G EA +IF+ + G+EPD+ Y L++ Y + MH G PD
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Query: 321 YNIMVDAYGR 330
+NI++ AY +
Sbjct: 374 FNILICAYAK 383
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG ++ A F +M
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ +VY S I L KA E I + + R C +T + +I+ + K +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL-NTIFFNSIIHSHCKEGRVIE 494
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KPN+ TY+ L++ + G +EA ++ + G++PD YN L+
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y +SRM G P+ +YNI++
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ AY +++A VF +MR++GL P+ V Y + I L K G+ A+
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P+ YT +I+ K A +L EM N + +++++ +
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++F+ + G++P+V Y+ L++ Y L +M +G +PD +
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 321 YNIMVDAYGRA 331
YN +++ Y R
Sbjct: 549 YNTLINGYCRV 559
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A + KA ++ + +P TY +L YC S ++A ++MR G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------------- 227
+ P V YNS +D L K G +A +IF M + +P TY
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356
Query: 228 ------------------TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++I Y K K A+ +F++MR H PN+ TY A++
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G ++A FEQ+ G+ P++ Y +L+ +
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE LE+LD + ++ ++C G + ++E +F M + G+ P+ + Y++ I
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG G +A ++ M +P TY +IN Y + S+ AL LF EM S
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PNI TY ++ A+E++ + +G + ++ YN ++ EA R+
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ + + + ++NIM+ A + G
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVG 665
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + +++D P Y L+ + C+ +KAE + EM G+ + + +NS I
Sbjct: 425 AMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
K G ++ ++F M R +P+ TY+ +I+ Y A K A KL + M S KP
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TY L+N + R ++A +F+++ +G+ P++ YN +++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSYIDGLLKGGNPQ 206
C+P + +LLK C ++A + M R G P V Y + I+G K G+
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA + M P TY+ +I K A+++ M + PN TY +++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ + +EA ++++ G+EPDV YN+LM EA ++ M G E
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 316 PDRASYNIMVDAYGRAG 332
PD A+Y ++ Y G
Sbjct: 334 PDIATYCTLLQGYATKG 350
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ PT TY +L+ C +G L+ A + K G A+ + + GL A
Sbjct: 82 KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141
Query: 209 VEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTA 264
++I +RM C P + T+++ ++S AL+L + M R P++ +YT
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMG 313
++N F +EG ++A + ++ I PDV Y++++ A L + + G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 314 CEPDRASYNIMVDAY 328
P+ +YN ++ Y
Sbjct: 262 VMPNCMTYNSILHGY 276
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWD 113
IF + IL + R + NTI+ F+S+ +H +I + +R+ K +
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIF--FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
I + LI+ Y +A + P TY L+ YC ++ A
Sbjct: 511 VITYST-----LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
A+F+EM G+ P+ + YN + GL A E++ + + Q TY ++++
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K + + AL++F + + T+ ++ A + G +EA+++F G+ P+
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 294 VYAYNALME 302
+ Y + E
Sbjct: 686 YWTYRLMAE 694
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY+ ++ A C + ++KA V M K G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS + G G P++A+ ++M D +P TY +++ K + A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI P+ Y ++ L+ AY
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G PD +Y ++ ++G E Y
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ + G L+KA + EM G+ P+ V Y+S I L K KA+
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M ++ P+ TY +++ Y + + A+ +M S +P++ TY +L++
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA ++F+ + G++P++ Y L++ Y + MH G P+
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374
Query: 319 ASYNIMVDAYGRAG 332
++I++ AY + G
Sbjct: 375 YVFSILICAYAKQG 388
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG +E A F +M
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P +VYNS I L KA E I + + R C T + +I+ + K +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVIE 497
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I TY+ L++ + G +EA ++ + G++PD YN L+
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y ISRM G PD +YNI++
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++D R P Y L+ + C+ +KA+ + EM G+ + +NS ID K
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++ ++F M R +P TY+ +I+ Y A K A KL M S KP+ T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
Y L+N + + E+A +F +++ +G+ PD+ YN +++
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY G +++A VF +MR+ GL P V Y + I L K G + A+
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P Y +I+ K A +L EM + + +++++ +
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++F+ + G++PD+ Y+ L++ Y L +M +G +PD +
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 321 YNIMVDAY 328
YN +++ Y
Sbjct: 552 YNTLINGY 559
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWD 113
IF + IL + R + +TI+ F+S+ +H +I + +R+ K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
I + LI+ Y +A ++ P TY L+ YC +E A
Sbjct: 514 IITYST-----LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+FREM G+ P + YN + GL + A E++ + Q TY ++++
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K + + AL++F + + T+ ++ A + G +EA+++F L G+ PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 294 VYAYNALME 302
V Y+ + E
Sbjct: 689 VRTYSLMAE 697
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL+ Y G L + + M + G+ P+ V++ I K G +A+ +
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M++ P T TY +I + K+ + A++ F +M + P Y +L+++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISR-------MHMGCEPDRAS 320
++A+E+ ++ GI D +N++++++ R+I + +G +PD +
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 321 YNIMVDAYGRAG 332
Y+ ++D Y AG
Sbjct: 517 YSTLIDGYCLAG 528
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P+ ++++I Y K K A+ +F++MR P+ TY ++ +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A FEQ+ + P YN+L+ +A LI M G D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 321 YNIMVDAYGRAG 332
+N ++D++ + G
Sbjct: 482 FNSIIDSHCKEG 493
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ YC++G +++A + M G+ P V YN+ I+G K + A+ +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY +++ + ++ A +L+ + + + TY +++ +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A + R G PD +
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 321 YNIMVD 326
Y++M +
Sbjct: 692 YSLMAE 697
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
LE+ + +P TY+ + Y +G LE A ++ EM+ G+ V YN+ + K
Sbjct: 352 LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKL 411
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G + A+++ + M + TY +++ YGK K ++F EM+ + PN+ TY
Sbjct: 412 GRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTY 471
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-H 311
+ L++ +++ L EEA E+F + + AG++ DV Y+ L+ A L+ M
Sbjct: 472 STLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTK 531
Query: 312 MGCEPDRASYNIMVDAYGRAGLHE 335
G P+ +YN ++DA+GR+ E
Sbjct: 532 EGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVEIFQRM 215
++ L+ AY SG ++A VF M+ GL P+ V YN+ ID KGG ++ VEIF+ M
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R+ QP TY ++ + + A LFNEM ++ TY L++A + G
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQM 344
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
+ A EI ++ G I P+V Y+ + + Y R+ +G DR SYN +
Sbjct: 345 DLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTL 404
Query: 325 VDAYGRAGLHE 335
+ Y + G E
Sbjct: 405 LSIYAKLGRFE 415
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 80 NTIWDAFDSLPPTHAT---WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLH- 135
NT++ AF +L + +D+ I V ++++ +V + V I+A G+ +
Sbjct: 220 NTVF-AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAV----IDACGKGGVEF 274
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+ + E+L + P TY LL GL E A +F EM G+ YN+
Sbjct: 275 KRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTL 334
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D + KGG A EI M P+ TY+ M + Y KA + AL L+NEM+
Sbjct: 335 LDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------RLISR 309
+ +Y L++ +A+ G E+A ++ +++ +G++ DV YNAL++ Y ++R
Sbjct: 395 GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTR 454
Query: 310 MHMGCEPDRA-----SYNIMVDAYGRAGLHE 335
+ + DR +Y+ ++D Y + L+E
Sbjct: 455 VFKEMKKDRVFPNLLTYSTLIDVYSKGSLYE 485
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 109/284 (38%), Gaps = 72/284 (25%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ YG++ + + E+ R P TY+ L+ Y L E+A VFRE ++ G
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA------- 237
L V+Y+ I+ L K G AV + M ++ +P+ TY +I+ +G++
Sbjct: 499 LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLV 558
Query: 238 ------------SKSFM----------------ALKLFNEMRSHK--------------- 254
S SFM K + ++ S K
Sbjct: 559 DGVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIR 618
Query: 255 -------------CKPNICTYTALVNAFAREGLCEEAEEIFEQL-----QGAGIEPDV-- 294
KPN+ T++A++NA +R E+A + E+L Q G+ +
Sbjct: 619 SILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLM 678
Query: 295 -YAYNALMEAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++ N ++A L + M A YN + D G G
Sbjct: 679 GFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRG 722
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAE-----AVFREMRKYGLPPSAVVYNSYIDGLL 200
+S+ +ED Y LL+ G KA A+ RE RK + ++ I L
Sbjct: 143 FESKLCGSED-YTFLLRELGNRGECWKAIRCFDFALVREGRK---NERGKLASAMISTLG 198
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G + A +F+ + + ++ +I+ YGK+ A+K+F M+ KPN+
Sbjct: 199 RLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLV 258
Query: 261 TYTALVNAFAREGL-CEEAEEIFEQLQGAGIEPDVYAYNALM---------EAYR-LISR 309
TY A+++A + G+ + EIFE++ G++PD YN+L+ EA R L +
Sbjct: 259 TYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNE 318
Query: 310 M-HMGCEPDRASYNIMVDAYGRAG 332
M G + D +YN ++DA + G
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGG 342
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 12/118 (10%)
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI+ G+ K +A +F S + ++AL++A+ + G +EA ++FE ++ +G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 290 IEPDVYAYNALMEA--------YRLI----SRMHMGCEPDRASYNIMVDAYGRAGLHE 335
++P++ YNA+++A R++ + G +PDR +YN ++ R GL E
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 141 TYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
TYL + R + P T+ + Y +G + +A F EM +GL P+ +Y I+G
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K GN +A+ IF+ + P +T + I+ K + ALK+F+E++ P++
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
TY++L++ F ++G E+A E+ +++ GI P+++ YNAL++ A +L
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619
Query: 310 M-HMGCEPDRASYNIMVDAYGRA 331
M G EPD +Y+ M+D Y ++
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKS 642
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ EL + +P TY+ L+ +C G +EKA + EM G+ P+ +YN+ +DGL
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 605
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G+ Q+A ++F M +P + TY+ MI+ Y K+ A LF+EM S +P+
Sbjct: 606 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 665
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RL 306
Y ALV+ +EG E+A +F ++ G + ++N L++ Y +
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM 724
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
I++ M PD +Y ++D + +AG E
Sbjct: 725 IAKQIM---PDHVTYTTVIDWHCKAGKME 750
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + +A + E+LD +P Y +L+ + +G L +A ++FR + G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P +++I GLLK G Q+A+++F +K P TY+ +I+ + K + A
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +EM PNI Y ALV+ + G + A ++F+ + G+EPD Y+ ++
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA+ L M G +P YN +V + G
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C G +EKA + + M G P++ + I+G + N +A+E+ M
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ PS +Y MIN +A KL +M KPN+ Y+ L+ +A EG
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
EEA + + + +G+ PD++ YNA++ +M G +PD ++
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460
Query: 325 VDAYGRAG 332
+ Y + G
Sbjct: 461 ILGYSKTG 468
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ T+ E+ + P + + L+ + G +++ + M G+P + + YN I
Sbjct: 227 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 286
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL K G +KA EI + M C+P++ T+ L+I Y + AL+L +EM
Sbjct: 287 HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 346
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P+ +Y A++N A ++ E++ +G++P+V Y+ L+ EA RL
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 406
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
+ M G PD YN ++ +AG E +Y L
Sbjct: 407 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ LL++ YC + +A + EM K L PSAV Y + I+GL + A
Sbjct: 310 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 369
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M +P+ Y+ +I Y + A +L + M P+I Y A+++
Sbjct: 370 KLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 429
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
++ G EEA ++QG G++PD + A + Y +M G P+
Sbjct: 430 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 489
Query: 319 ASYNIMVDAYGRAG 332
Y ++++ + +AG
Sbjct: 490 PLYTVLINGHFKAG 503
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ +G +E+A E++ GL P AV + ++I G K G +A + F M
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ YT++IN + KA AL +F + + P++ T +A ++ + G +
Sbjct: 482 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 541
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
EA ++F +L+ G+ PDV+ Y++L+ +A+ L M + G P+ YN +V
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 601
Query: 326 DAYGRAG 332
D ++G
Sbjct: 602 DGLCKSG 608
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + +A + E+ P Y L+ C G +EKA +FREM + G
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + +N+ IDG K Q+A ++FQ M P TYT +I+ + KA K A
Sbjct: 695 FA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 753
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD-------VYAY 297
LF EM+ + TYT+L+ + + G E +FE++ G++PD +YA+
Sbjct: 754 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 813
Query: 298 ---NALMEAYRL 306
+ L+EA++L
Sbjct: 814 CKEDNLVEAFKL 825
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 86/205 (41%), Gaps = 18/205 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y+ L+ Y G +E+A + M G+ P YN+ I L K G ++A
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ +P T+ I Y K K A K F+EM H PN YT L+N +
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 501
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EA IF L G+ PDV +A + EA ++ S + G PD +
Sbjct: 502 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561
Query: 321 YNIMVDAYGRAG-------LHEGKC 338
Y+ ++ + + G LH+ C
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEMC 586
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA + E+L + T ++ L+ YC S +++A +F+EM + P V Y +
Sbjct: 681 EKAMNLFREML-QKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 739
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G ++A +F+ M+ T TYT ++ Y K +S LF +M +
Sbjct: 740 IDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGV 799
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
KP+ TY ++ A +E EA ++ +++ G G+ ++ L+ EA +
Sbjct: 800 KPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASK 859
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ M +G +P A+ + +V ++ AG
Sbjct: 860 LLDEMGELGLKPSLAACSTLVRSFHEAG 887
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 88/186 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + ++A + E++ + +P TY ++ +C +G +E+A +F+EM++
Sbjct: 704 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 763
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L V Y S + G K G + +F++M +P TY L+I + K A
Sbjct: 764 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 823
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL +E+ + L+ A + EA ++ +++ G++P + A + L+ ++
Sbjct: 824 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 883
Query: 305 RLISRM 310
+M
Sbjct: 884 HEAGKM 889
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 116/300 (38%), Gaps = 57/300 (19%)
Query: 86 FDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL 145
F + PT T + +S L+ N W I++ S + L + LH+ L
Sbjct: 29 FSTSTPTSETLNFSQQISDFLKQNN-WKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRL 87
Query: 146 LD-------SRCIPT-EDTYALLLKAYCMSGLLEKAEAVFREM----------------- 180
LD +P D++++L C S L A V +M
Sbjct: 88 LDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFW 147
Query: 181 -RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-------CQ----------- 221
R YG S VV++ ID + G +A +F K D C
Sbjct: 148 FRNYG-GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLV 206
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P+T TYT++ +A + A F EM+ KP+ +AL++ F REG +E I
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGR 330
+ + GI ++ YN L+ +M +GC+P+ ++ ++++ Y R
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 129 YGQKSLHKKAE-FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
YG L + +E F E + ++ + P E TY L++ A+C L +A + E+ G+
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
+++ I L K + +A ++ M +PS + ++ + +A K A ++
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
F ++S P+ T LVN + E+A + +QL
Sbjct: 896 FEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 122/233 (52%), Gaps = 17/233 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+ + H++A E L+ C P E Y ++ +C +G +++A + EM++
Sbjct: 81 VLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKER 140
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ +++++ I GL + G +A+E F+ M + C P+ TY ++N KA++ A
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEA 199
Query: 244 LKLFNEMR-----SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
L+LF++M SH C+P++ +Y+ +++A + ++A E F++++ G P+V Y+
Sbjct: 200 LELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 259
Query: 299 ALMEAYRLISR--------MHM---GCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+L++ + R +HM G + +N M+ A + E C +
Sbjct: 260 SLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQF 312
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK-----YGLPPSAVVYNSYIDGLL 200
+ C P TY ++ C + +++A +F +M K +G P + Y++ ID L
Sbjct: 172 MGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALC 231
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K KA E F+RM+ C P+ TY+ +I+ K + L+L M+ NI
Sbjct: 232 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINII 291
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
+ A+++A + E+A + FE+L +G +P+V YN + EAYR++ M
Sbjct: 292 DFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM 351
Query: 311 -HMGCEPDRASYNIMVDAYGRAG 332
PD +Y+ ++D + +AG
Sbjct: 352 VESKVTPDVITYSSIIDGFCKAG 374
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y+ ++ A C + ++KA F+ MR G P+ V Y+S IDGL K P + +
Sbjct: 216 CEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECL 275
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ MK + + M++ K + A + F + KPN+ TY V+
Sbjct: 276 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGL 335
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYG 329
+ G +EA I ++ + + PDV Y+++++ + RM D+A D +
Sbjct: 336 CKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM------DKAD-----DVFT 384
Query: 330 RAGLHE 335
R +HE
Sbjct: 385 RMMVHE 390
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
LE+++S+ P TY+ ++ +C +G ++KA+ VF M + P V + + + G +
Sbjct: 349 LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 408
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
++A + + M P +TY ++++ A AL+++++M+ K +P+ TY
Sbjct: 409 KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTY 468
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMH 311
L+ R +EA+E + ++ + P+ +AL+E L + +
Sbjct: 469 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528
Query: 312 MGCEPDRASYNIMVD 326
+GC+P ++ I+V+
Sbjct: 529 VGCQPLGETFKILVE 543
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A + +KA + LL S P TY + + C +G +++A + EM +
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + Y+S IDG K G KA ++F RM C P T+ +++ + + KS A
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
++ +M + P + TY L++ E A EI+ +++ +PD Y L++
Sbjct: 416 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQ 473
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 8/216 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + + KA+ + ++ CIP T+ LL + +A V +M G
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P YN +D + + + A+EI+ +MKR QP TY +I +A + A
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + M + PN ALV ++G +EA + + + G +P + L+E
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Query: 305 RLISRMHM--------GCEPDRASYNIMVDAYGRAG 332
L + G D A+Y++ V +AG
Sbjct: 546 YLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAG 581
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 3/193 (1%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D +V + L+E ++ +A +++ C P +T+ +L++ L +K
Sbjct: 494 DNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL---YLRKK 550
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
EA + +R G A Y+ + + K G P +AVE+ ++M +P TY ++
Sbjct: 551 WEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLR 610
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ A+ F +M S C P + TYT L+ + +EA IFE + AG P
Sbjct: 611 SLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTP 670
Query: 293 DVYAYNALMEAYR 305
L R
Sbjct: 671 QAQTMRTLSSCLR 683
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT+D +LL G+L+ + R++ Y S V L + +P A
Sbjct: 12 PTQDVAEILL------GILKPGPYLCRDLAGYA---STVTPEVAGRVLQQVEDPDVAWTF 62
Query: 212 FQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
FQ + Q + T +++N + KA + A +L E C PN YT ++N F
Sbjct: 63 FQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFC 122
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRAS 320
+ G ++A E+ ++++ G++ DV ++ L+ EA M C P+ +
Sbjct: 123 KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVIT 182
Query: 321 YNIMVDAYGRA 331
YN +V+ +A
Sbjct: 183 YNTVVNGLCKA 193
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+L + C +G ++A V +M G+ P Y + + L + A+ F++M
Sbjct: 569 TYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKM 628
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
C P TYTL+I A + A ++F M + P T L + G
Sbjct: 629 ASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ ++ C G A + ++M + G P+ V YN+ ID L K +A++
Sbjct: 43 PDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDF 102
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M ++ P TY+ +++ + + A LF +M PN T+T L++ +
Sbjct: 103 FSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCK 162
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
+ + EA +FE + G+EPDVY YNAL++ Y S+M GC P+ S
Sbjct: 163 KRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRS 222
Query: 321 YNIMVDAYGRAG 332
YNI+++ + ++G
Sbjct: 223 YNILINGHCKSG 234
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ Y +S +A+ + ++D + C P +Y +L+ +C SG +++A+ + EM
Sbjct: 191 LVDGYCSRSQMDEAQKLF-NIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P Y++ + G + G PQ+A E+ + M P+ TY+++++ K A
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEA 309
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+L M+ K +PNI YT L+ G E A E+F L GI+P V Y ++
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA L M + GC P+ +YN+++ + R G
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNG 409
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I++ + L +A + E++ P TY+ +L +C G + +A ++F++M +
Sbjct: 86 IIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERN 145
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V + IDGL K +A +F+ M +P TY +++ Y S+ A
Sbjct: 146 VIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQ 205
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
KLFN M C PN+ +Y L+N + G +EA+ + ++ + PD++ Y+ LM
Sbjct: 206 KLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGF 265
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+ M G P+ +Y+I++D + G
Sbjct: 266 CQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ +K + +A + + + P TY L+ YC +++A+ +F M +
Sbjct: 155 ILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK 214
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ YN I+G K G +A + M P TY+ ++ + + + A
Sbjct: 215 GCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEA 274
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+L EM S+ PN+ TY+ +++ + G +EA E+ + +Q + IEP+++ Y L+E
Sbjct: 275 QELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKC 338
A L S + + G +P +Y +M+ + GL C
Sbjct: 335 MCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + +A+ E+ P TY+ L++ +C G ++A+ + +EM Y
Sbjct: 225 ILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ + Y+ +DGL K G+ +A E+ + M+ +P+ YT++I K A
Sbjct: 285 GLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAA 344
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+LF+ + +P + TYT +++ + GL EA E+F ++ G P+ YN +++
Sbjct: 345 RELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQG 404
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMVD 326
+ RLI M G D +++ ++ D
Sbjct: 405 FLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 11/159 (6%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M K GL P+ V +N+ + GL AV++F M + +P TY+ +IN K
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ MAL+L +M CKPN+ Y ++++ ++ L EA + F ++ GI PDV+ Y++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 300 LMEAYRLISRMHMGCE-----------PDRASYNIMVDA 327
++ + + R++ P++ ++ I++D
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDG 159
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++ + C L+ +A F EM K G+PP Y+S + G G +A
Sbjct: 76 CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F++M P+ T+T++I+ K A +F M +P++ TY ALV+ +
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EA+++F + G P+V +YN L+ EA L++ M H PD
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255
Query: 319 ASYNIMVDAYGRAG-------LHEGKCSYSLV 343
+Y+ ++ + + G L + CSY L+
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLL 287
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +++ GL +A +FREM G P++ YN I G L+ G+ AV +
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417
Query: 212 FQRMKRDCCQPSTETYTLMINL 233
+ M + T+ ++ +L
Sbjct: 418 IEEMVGKGFSADSSTFRMLSDL 439
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++L+ AYG+ +AE + P+ + L++AY + KAEAVFR M+
Sbjct: 146 LMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQT 205
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---KRDCCQPSTETYTLMINLYGKASK 239
G PSAV Y + ++G ++A IF+ + KR +P + + +MI +Y KA
Sbjct: 206 SGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGD 265
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF +M + T+ +L++ E +E I++Q+Q ++PDV +Y+
Sbjct: 266 YAQARKLFAQMSERGIPLSTVTFNSLMSF---ETDYKEVSNIYDQMQRTALKPDVVSYSL 322
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
L++AY R + G P R SYNI++DA+ +GL E
Sbjct: 323 LIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVE 369
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 86 FDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL 145
F+SL + ++ N+ Q++ +V S LLI+AYG+ ++A + E+
Sbjct: 288 FNSLMSFETDYKEVSNIYDQMQRTALKPDVVSYS----LLIKAYGKARREEEALAVFEEM 343
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
LD+ PT +Y +L+ A+ +SGL+E+A VF+ MR++ + P Y + + + +
Sbjct: 344 LDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDM 403
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A + F+R+K D +P+ Y ++ Y K + ++++ MR +PN YT +
Sbjct: 404 DGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTI 463
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR--MHMG 313
++ R A F++++ G D A N L+ EA L + +
Sbjct: 464 MDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQLE 523
Query: 314 CEPDRASYNIMVDAYGRAGLH 334
+PD +Y + ++ G H
Sbjct: 524 AKPDGTTYGLEINGTGNEYKH 544
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++L+ AYG+ +AE + P+ + L++AY + KAEAVFR M+
Sbjct: 146 LMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQT 205
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM---KRDCCQPSTETYTLMINLYGKASK 239
G PSAV Y + ++G ++A IF+ + KR +P + + +MI +Y KA
Sbjct: 206 SGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGD 265
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A KLF +M + T+ +L++ E +E I++Q+Q ++PDV +Y+
Sbjct: 266 YAQARKLFAQMSERGIPLSTVTFNSLMSF---ETNYKEVSSIYDQMQRTALKPDVVSYSL 322
Query: 300 LMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
L++AY R + G P R SYNI++DA+ +GL E
Sbjct: 323 LIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVE 369
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 86 FDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLEL 145
F+SL + ++ ++ Q++ +V S LLI+AYG+ ++A + E+
Sbjct: 288 FNSLMSFETNYKEVSSIYDQMQRTALKPDVVSYS----LLIKAYGKARREEEALAVFEEM 343
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
LD+ PT +Y +L+ A+ +SGL+E+A VF+ MR++ + P Y + + + +
Sbjct: 344 LDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDM 403
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A + F+R+K D +P+ Y ++ Y K + ++++ MR +PN YT +
Sbjct: 404 DGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTI 463
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR--MHMG 313
++ R A F++++ G D A N L+ EA L + +
Sbjct: 464 MDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQLE 523
Query: 314 CEPDRASYNIMVDAYGRAGLH 334
+PD +Y + ++ G H
Sbjct: 524 AKPDGTTYGLEINGTGNEYKH 544
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+++ +P TY L+ +C G + +A +FREM + G PS V YN IDG K G+
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGS 472
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A + M++ P TY +++ + K +ALKLF EM+ +PN+ YTA
Sbjct: 473 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA 532
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L++ A+EG E A ++++ + AG+ PD Y+AL+
Sbjct: 533 LISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 135/319 (42%), Gaps = 54/319 (16%)
Query: 67 QQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSV---QLRLNKKWDPIVLMSCVSI 123
Q+IL ++ E T+ + L + +T D+ V +++ N + L + V
Sbjct: 232 QEILEIMENEGIEATVG-TYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAV-- 288
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
I AY + ++A E + + P E TY +L+ +C G +E AE + +M+
Sbjct: 289 --INAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 346
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR---------------DCCQ------- 221
G+ + +++N+ IDG + G A++I M++ C+
Sbjct: 347 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 406
Query: 222 -------------PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
P+ TYT +I+++ K A +LF EM P++ TY +++
Sbjct: 407 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDG 466
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPD 317
+ ++G EAE ++++ G PDVY Y +L+ A +L M G EP+
Sbjct: 467 YTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPN 526
Query: 318 RASYNIMVDAYGRAGLHEG 336
+Y ++ + G E
Sbjct: 527 VVAYTALISGLAKEGRSEA 545
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++++ C SG ++ A + +M ++G+ +A+ YNS +D ++ + + EI + M+
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ + + TYT++++ A LFNEM+++ ++ YTA++NA+ R G
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVD 326
A ++ ++ G G+EP+ Y L+ + I +M G ++ +N M+D
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360
Query: 327 AYGRAGL 333
Y R G+
Sbjct: 361 GYCRKGM 367
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L C L++A+ + M + G+ P+ V Y + I K G+ +A +F+ M
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 448
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
PS TY +MI+ Y K A + EM P++ TY +LV+ G
Sbjct: 449 AEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 508
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIM 324
+ A ++FE+++ G EP+V AY AL+ A++L M G PD + Y+ +
Sbjct: 509 DVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSAL 568
Query: 325 V 325
V
Sbjct: 569 V 569
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E+ + P+ TY +++ Y G + +AE +EM K G P Y S +
Sbjct: 440 EARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLV 499
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G A+++F+ MK+ +P+ YT +I+ K +S A +L+++M
Sbjct: 500 HGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLI 559
Query: 257 PNICTYTALVNAF 269
P+ Y+ALV +
Sbjct: 560 PDDSLYSALVGSL 572
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ Y +K ++AE E+ +P TYA L+ +C++G ++ A +F EM++
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G P+ V Y + I GL K G + A +++ M + P Y+ ++
Sbjct: 522 GTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L+ YC G L+ A + M +PP A Y I GL G A+ + M
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R CQPS TYT+++ K+S A+K+ +EMR+ C PNI TY ++N RE +
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
+A +I +L G +PD +Y +++ R + C P+ +++++V
Sbjct: 225 DARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284
Query: 326 DAYGRAGLHE 335
+ R G+ E
Sbjct: 285 RFFCRGGMVE 294
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ E + E++++ C+P E T+ +L++ +C G++E+A V M ++G + + N
Sbjct: 259 EDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIV 318
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+ + K G A E M C P T +YT ++ +A + A +L NEM C
Sbjct: 319 INSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNC 378
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---- 311
PN T+ + ++GL ++A + EQ+ G + YNAL+ + + R+
Sbjct: 379 PPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALE 438
Query: 312 ----MGCEPDRASYNIMVDAYGRA 331
+ CEP+ +Y ++ A
Sbjct: 439 LFNSLPCEPNTITYTTLLTGLCHA 462
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++L C P+ TY +LL+A C S +A V EMR G P+ V YN I+G+ +
Sbjct: 162 DMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRED 221
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A +I R+ QP T +YT ++ A + LF EM + C PN T+
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
LV F R G+ E A E+ +++ G + N ++ +A+ ++ M
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341
Query: 313 GCEPDRASYNIMVDAYGRAG 332
GC PD SY ++ RAG
Sbjct: 342 GCSPDTISYTTVLKGLCRAG 361
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LEL +S C P TY LL C + L+ A + EM + P + V +N + +
Sbjct: 437 LELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQ 496
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++A+E+ Q+M C P+ T+ +++ + S AL+L + + S + T
Sbjct: 497 KGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTIT 556
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRM-HM- 312
Y+++V+ +RE EEA ++F +Q G+ P YN ++ A R I HM
Sbjct: 557 YSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMV 616
Query: 313 --GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
C P+ ++Y I+++ R GL + + Y L EL
Sbjct: 617 SNSCMPNESTYVILIEGLAREGLLK-EARYVLSEL 650
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +LK C + E E +F EM + P+ V ++ + +GG ++A+E+
Sbjct: 240 PDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEV 299
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM C +T ++IN K + A + N M S+ C P+ +YT ++ R
Sbjct: 300 LDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCR 359
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A+E+ ++ P+ +N + +A LI +M GC +
Sbjct: 360 AGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVT 419
Query: 321 YNIMVDAYGRAG 332
YN +V+ + G
Sbjct: 420 YNALVNGFCVQG 431
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 14/237 (5%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L ++ P V+ V L+EA + S +A E+ C P TY +++ C
Sbjct: 164 LRRECQPSVVTYTV---LLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRE 220
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
++ A + + YG P V Y + + GL + +F M + C P+ T+
Sbjct: 221 DRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+++ + + A+++ + M H C N ++N+ ++G ++A E +
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340
Query: 288 AGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
G PD +Y ++ +A L++ M C P+ ++N + + GL
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGL 397
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 73 VQREVDSNTIWDAFDSLP--PTHATWDDLI---------NVSVQLRLNKKWDPIVLMSCV 121
VQ VDS + F+SLP P T+ L+ + + +L + L
Sbjct: 429 VQGRVDS--ALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT 486
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L+ + QK ++A ++++ C P T+ LL E+A + +
Sbjct: 487 FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLV 546
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ + Y+S +D L + ++AV++F ++ +P Y +++ K ++
Sbjct: 547 SKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETD 606
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
A+ F M S+ C PN TY L+ AREGL +EA + +L G+
Sbjct: 607 RAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +L S P++ T L+ R G +A + +G+G DV+AYN L+
Sbjct: 54 AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113
Query: 303 AY----------RLISRMHMGCEPDRASYNIMVDAY---GRAG 332
Y RLI+ M + PD +Y ++ GR G
Sbjct: 114 GYCRYGRLDAARRLIASMPV--PPDAYTYTPLIRGLCDRGRVG 154
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F MR+ G+ P V +N+
Sbjct: 246 QKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTL 305
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A+E+F M+ C T TY +MINL G+ + + EM+
Sbjct: 306 IDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGL 365
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY
Sbjct: 366 VPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALN 425
Query: 306 LISRMHM-GCEPDRASYNIMVDAYG 329
++ M G E N +++A+G
Sbjct: 426 VVKAMRADGLEASTVVLNSLINAFG 450
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A + +EM G
Sbjct: 165 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 224
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G QKA + + M +P Y +MI+ +GK + A+
Sbjct: 225 VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAM 284
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
F+ MR +P++ T+ L++A + G + A E+F++++ + YN ++
Sbjct: 285 DAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLL 344
Query: 302 -EAYR------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
E R +++ M G P+ +Y +VD YGR+G
Sbjct: 345 GEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSG 383
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM
Sbjct: 199 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 258
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A++ F RM+ + +P T+ +I+ + K + A
Sbjct: 259 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA 318
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++LF+EMR C TY ++N E E E + +++ G+ P++ Y L++
Sbjct: 319 IELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDV 378
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
Y R G +P Y+ +V+AY + GL +
Sbjct: 379 YGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLAD 421
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + H +A + E+ +S C TY +++ E EA+ EM++ G
Sbjct: 305 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y + +D + G ++AV+ + MK D +PS+ Y ++N Y + + AL
Sbjct: 365 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHAL 424
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ MR+ + + +L+NAF + EA + + ++ G+ PDV Y LM+A
Sbjct: 425 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 484
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDA 327
+ + + GC PDR + ++ A
Sbjct: 485 IRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSA 518
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI + G +AE +LE L P Y LLK Y G L+ AE V EM +
Sbjct: 129 LISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQC 188
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G+ K+
Sbjct: 189 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKA 248
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM + +P+ Y +++ F + A + F++++ GIEPDV +N L
Sbjct: 249 FAVLR---EMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTL 305
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++A+ L M C +YNIM++ G EG
Sbjct: 306 IDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEG 352
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 14/244 (5%)
Query: 84 DAFD-----SLPPTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAY 129
DAFD + P TW+ LI+ +++L + L + ++I
Sbjct: 285 DAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLL 344
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G++ + E E+ + +P TY L+ Y SG ++A M+ GL PS+
Sbjct: 345 GEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSS 404
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+Y++ ++ + G A+ + + M+ D + ST +IN +G+ + A +
Sbjct: 405 TMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQF 464
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M+ + +P++ TYT L+ A R E+ I+E++ +G PD A L A R +
Sbjct: 465 MKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKH 524
Query: 310 MHMG 313
M +
Sbjct: 525 MRVA 528
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 101/188 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ +K +KA + ++L PT+ T+ ++ C G + +A + +
Sbjct: 544 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 603
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PS + YNS +DG +K GN A+ +++ M P+ TYT +IN + K+++ +A
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LK +EMR + ++ Y+AL++ F + E A+++F +L G+ P+ YN+++
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 723
Query: 304 YRLISRMH 311
+R ++ M
Sbjct: 724 FRDLNNME 731
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L+ +C +E A+ +F E+ + GL P+ +VYNS I G N + A+ +++M
Sbjct: 682 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 741
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D TYT +I+ K + A L+ EM S P+I T+ LVN +G E
Sbjct: 742 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 801
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A +I E++ + P V YN L+ EA+ L M G PD +Y+I++
Sbjct: 802 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 861
Query: 326 DA 327
+
Sbjct: 862 NG 863
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + +K A + ++L P TY++L+ G EKA +F +M
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +N+ I+GL K G +A + + + PS TY +++ + K AL
Sbjct: 570 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 629
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ EM PN+ TYT+L+N F + + A + ++++ G+E DV AY+AL++ +
Sbjct: 630 AVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 689
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAY 328
+ +G P+R YN M+ +
Sbjct: 690 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 58/298 (19%)
Query: 91 PTHATWDDLI-------NVSVQLRLNKKW----DPIVLMSCVSILLIEAYGQKSLHKKAE 139
P+ AT+ +I N+ LRL ++ P+ L+ S L++ Y + A
Sbjct: 328 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS--LMKGYCAQGNLDSAL 385
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ ++ + P + TY++L++ C SG +EKA ++ +M+ G+PPS NS + G
Sbjct: 386 NLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGY 445
Query: 200 L----------------------------------KGGNPQKAVEIFQRMKRDCCQPSTE 225
L KGG +A + M P+
Sbjct: 446 LKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 505
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+Y MI + + MA +F++M + KPN+ TY+ L++ ++G E+A ++F+Q+
Sbjct: 506 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565
Query: 286 QGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
I P + +N ++ +L + + G P +YN +VD + + G
Sbjct: 566 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 623
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P+E T+ ++ A G + +A + EM G P + VV S + G GN A+
Sbjct: 327 VPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALN 386
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F ++ D P+ TY+++I + A +L+ +M+ + P++ +L+ +
Sbjct: 387 LFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL 446
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ L EEA ++F++ G+ +++ YN +M EA L+ M + G P+
Sbjct: 447 KAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 505
Query: 320 SYNIMVDAYGRAG 332
SYN M+ + R G
Sbjct: 506 SYNDMILGHCRKG 518
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++ + A+ + ELL+ P Y ++ + +E A +++M
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+P Y + IDGLLK G A +++ M P T+ +++N + A
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 804
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM P++ Y L+ + REG +EA + +++ G+ PD Y+ L+
Sbjct: 805 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y+E+L +P T+ +L+ C G LE A + EM + + PS ++YN+ I G +
Sbjct: 772 YMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFR 831
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
GN ++A + M P TY ++IN K +S
Sbjct: 832 EGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 871
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELL 146
DS P D LIN + K++D L V L+ AY + + + A + ++
Sbjct: 165 DSDPSPVVFVDHLINCA------KRFD-FELDHRVFNYLLNAYIRANRIENAIDCFNAMI 217
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
IP +LL A ++ + ++ +M G+ + + LK G +
Sbjct: 218 CQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVE 277
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A E F+ K + Y+++I K S + L+L EM+ P+ T+T+++
Sbjct: 278 EAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 337
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCE 315
A +G EA + E++ G ++ +LM+ Y L S +++ G
Sbjct: 338 VACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLF 397
Query: 316 PDRASYNIMVDAYGRAG 332
P++ +Y+++++ +G
Sbjct: 398 PNKVTYSVLIEGCCNSG 414
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A G+ KA + + + C+P Y +L+ G +++A + +M + G
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 182
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN ID L G +KA F MKR P TY ++N K ++ A
Sbjct: 183 IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEAC 242
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF+EM+++KC P++ T+ L++ A+ G E+A E +L G P+ Y YNAL+
Sbjct: 243 DLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGF 302
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ Y L M C PD +Y I+V + R G
Sbjct: 303 CRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRG 341
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ A +G KA VF M+K G P VVYN I L K G +A+E+ + M
Sbjct: 119 TYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 178
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R P TY ++I++ + A F M+ K P++ TY L+N +
Sbjct: 179 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 238
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
+EA ++F+++Q PD+ + L++ RM MG P+ YN +
Sbjct: 239 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNAL 298
Query: 325 VDAYGRAG 332
+ + R+G
Sbjct: 299 ISGFCRSG 306
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 130 GQKSLHKKAEFTYL--ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
G K L + E L E+ ++C+P T+ L+ +G +E A + K G P
Sbjct: 231 GLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVP 290
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
++ +YN+ I G + G K E+FQ M C P + TYT+++ + + + MA++L
Sbjct: 291 NSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELL 350
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
EM P + TY L+ + + G E+A +F+++ G PD+ Y+AL
Sbjct: 351 QEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+ C G+L +A + M + Y+ +D L K G KA+E+F M++
Sbjct: 88 LIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAG 147
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C P T Y ++I+ GK K AL+L +M P+ TY +++ + G E+A
Sbjct: 148 CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAY 207
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAY 328
F ++ PDV YN L+ + + R C+ PD ++ ++D
Sbjct: 208 SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 267
Query: 329 GRAGLHEGKCSYSLVELSVKHYP 351
+AG E S + + H P
Sbjct: 268 AKAGRMEDALEQSARLVKMGHVP 290
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 12/214 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKA 208
C P Y L+ YC +G ++A +FR +++ G P+AV +++ + L K A
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ +FQ M Q +I+ + A +L + M +H ++ TY+ L++A
Sbjct: 67 LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
+ G +A E+F +Q AG PD YN L+ EA L+ M+ G PD
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186
Query: 318 RASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+YNI++D G +E S+ + KH P
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP 220
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
+ C P ++ L+ C A AVF+EM GL V N+ I + G +
Sbjct: 40 EGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLR 99
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+A + M TY+ +++ GKA ++ AL++F+ M+ C P+ Y L+
Sbjct: 100 QARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLI 159
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCE 315
+ ++G +EA E+ E + GI PD YN +++ AY M
Sbjct: 160 SCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS 219
Query: 316 PDRASYNIMVDA 327
PD +YN +++
Sbjct: 220 PDVVTYNTLLNG 231
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 54/251 (21%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
+LI G++ +A LELL+ +P TY +++ G EKA + F
Sbjct: 157 VLISCLGKQGKVDEA----LELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGM 212
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ P V YN+ ++GL K +A ++F M+ + C P T+ +I+ KA +
Sbjct: 213 MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGR 272
Query: 240 SFMALK-----------------------------------LFNEMRSHKCKPNICTYTA 264
AL+ LF +M C P+ TYT
Sbjct: 273 MEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 332
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
LV F+R G A E+ +++ G P + YN L+ +AY L M G
Sbjct: 333 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 392
Query: 314 CEPDRASYNIM 324
PD +Y+ +
Sbjct: 393 FNPDMQTYSAL 403
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 91 PTHATWDDLINVSVQLRLNKK----WDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFT 141
P T++ L+N +LR + +D + C+ L LI+ + + A
Sbjct: 220 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 279
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L+ +P Y L+ +C SG ++K +F++M + P ++ Y + G +
Sbjct: 280 SARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 339
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A+E+ Q M R+ P+ TY ++I A + A LF EM + P++ T
Sbjct: 340 RGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQT 399
Query: 262 YTALVN 267
Y+AL N
Sbjct: 400 YSALPN 405
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + K + ++++ C P TY +L+ + G A + +EM + G
Sbjct: 298 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 357
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
P+ YN I L G + A +F+ M P +TY+ + NL
Sbjct: 358 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 406
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 85/150 (56%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ +C G + +A +FREM G PS V YN +DG +K G+ ++A
Sbjct: 386 PNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 445
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M++ P +Y +++ + K +AL+LF EM+ KPN+ YTAL++ A+
Sbjct: 446 KKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK 505
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
EG EEA ++++ + G G+ PD Y+AL+
Sbjct: 506 EGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++++ YC SG + A + EM ++G+ +A+ YNS +D + + + E+ + M+
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ +P+ TYT++++ A +F EM+S ++ Y++++NA+ R G
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVD 326
A E+F++ G GIEP+ + Y AL+ + I +M G ++ +N M+D
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326
Query: 327 AYGRAGL 333
Y R +
Sbjct: 327 GYCRKNM 333
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY + ++A + E + + P E TY L+ +C G +E AE + +M+ G
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + +V+N+ IDG + KA+EI M++ + TY + +A++ A
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 373
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M +PN +YT L++ EG EA +F ++ G G EP + YN +M+ Y
Sbjct: 374 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 433
Query: 305 ------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
R R E ++ D Y A L G C V+++++ +
Sbjct: 434 IKKGSIREAERFKKEMEKK----GLVPDIYSYAALVHGHCVNGKVDVALRLF 481
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L++AY +K + AE L+++++ I PT TY +L+ + + K EAVF EM+
Sbjct: 184 LLDAYTREKDDDRVAEM--LKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKS 241
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L Y+S I+ + GN ++A E+F + +P+ TY +IN + K +
Sbjct: 242 KNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEA 301
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L +M+ N + +++ + R+ + ++A EI ++ GIE DVY YN L
Sbjct: 302 AEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLAC 361
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
R +RM G P+ SY ++ + G
Sbjct: 362 GLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEG 402
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+++A+ + R M + G+ P+ V Y + I G+ +A +F+ M + +PS TY +
Sbjct: 369 MDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNV 428
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
M++ Y K A + EM P+I +Y ALV+ G + A +FE+++ G
Sbjct: 429 MMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRG 488
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
+P++ AY AL+ EA++L M G PD A Y+ +V
Sbjct: 489 SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E+ + P+ TY +++ Y G + +AE +EM K GL P Y + +
Sbjct: 406 EARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALV 465
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G A+ +F+ MK+ +P+ YT +I+ K +S A +L++ M
Sbjct: 466 HGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLT 525
Query: 257 PNICTYTALVNAF 269
P+ Y+ALV +
Sbjct: 526 PDDALYSALVGSL 538
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 66 AQQILRF-VQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLR--LNKKWDPIVLMSCVS 122
A+ +LR +++ V N + ++ +L H D++ R +P ++ V
Sbjct: 372 AKNLLRIMIEKGVRPNHV--SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNV- 428
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+++ Y +K ++AE E+ +P +YA L+ +C++G ++ A +F EM++
Sbjct: 429 --MMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 486
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G P+ V Y + I GL K G ++A +++ M D P Y+ ++
Sbjct: 487 RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++ C P E TY L+ + G LE A F+EM + GL P+ V Y + IDG K G
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ + +RM+ C P+ E+Y +IN K ++ A K+ ++M PN+ TYT L+
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEP 316
+ R G + A +IF ++ P++Y Y++L+ EA R+ +GCEP
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM---SEIGCEP 647
Query: 317 DRASYNIMVDAYGRAG 332
+Y+ +V R G
Sbjct: 648 TLDTYSTLVSGLCRKG 663
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +P TY L+ C+ G A +F M +G + YN I GL
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG+ +KA+ +F++M + P+ TY +IN Y A +L + M+ + C+P+ T
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
Y LV+ F++ G E A F+++ G+ P+ +Y AL++ A L+ RM
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 311 HMGCEPDRASYNIMVDAYGR 330
MGC P+ SYN +++ +
Sbjct: 541 EMGCNPNVESYNAVINGLSK 560
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ TY ++K C+ G +EKA +F +M K G P+ V YN+ I+G L GN A
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ MK + C+P TY +++ + K K A F EM PN +YTAL++ +
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHS 524
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
++G + A + ++++ G P+V +YNA++ EA ++ +M G P+
Sbjct: 525 KDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVI 584
Query: 320 SYNIMVDAYGRAG 332
+Y ++D R G
Sbjct: 585 TYTTLIDGLCRNG 597
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ PT TY L + A C E+A + M+K G P+ Y + I GL + G
Sbjct: 293 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+ ++ +M ++ P+T TY +IN + ALK+F+ M H N TY
Sbjct: 353 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 412
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
++ G E+A +FE++ G P V YN L+ Y RL+ M
Sbjct: 413 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSY--SLVELSVKHYPA 352
GCEPD +YN +V + + G E Y +VE + P
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K ++AE ++ P TY L+ +C + L+ A VF M K G
Sbjct: 204 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 263
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P++V Y++ I+GL G +A+++ + M +P+ TYTL I A+
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L M+ C+PN+ TYTAL++ +R G E A ++ ++ G+ P+ YNAL+
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 15/215 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + + A F + E+++ P +Y L+ + G ++ A ++ + M + G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ I+GL K +A +I +M P+ TYT +I+ + ++ A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F++M KC PN+ TY++L+ +EG +EAE + E G EP + Y+ L+
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSE----IGCEPTLDTYSTLVSGL 659
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
EA +L+ M G PDR Y ++ A+
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAH 694
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
L SC ++L+ + + + A Y ++L+S P+ T+ L+ G + +AE +
Sbjct: 163 LYSCNTLLI--QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 220
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
++ +Y L P Y S I G + N A +F RM ++ C P++ TY+ +IN
Sbjct: 221 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 280
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ AL + EM +P + TYT + A EEA E+ +++ G P+V
Sbjct: 281 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340
Query: 297 YNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
Y AL+ + ++ + G P+ +YN +++ G
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C+P TY+ L+ C G ++AE M + G P+ Y++ + GL + G +A
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 668
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ + MK P E Y ++ + K + ALK+F+ + + + ++ Y AL+ A
Sbjct: 669 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 728
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G EEA+ +F+ + D + L++
Sbjct: 729 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDG 763
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT DTY+ L+ C G +AE + ++M++ G P +Y S + K A+
Sbjct: 645 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 704
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+IF ++ Q Y +I KA + A LF+ M + + +T LV+
Sbjct: 705 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+EG + ++ ++ P++ Y L
Sbjct: 765 LKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 46/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L++KA + + E+ G S N+ + L K + A +
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA------- 264
+++M QPS T+ +IN+ K K A + +++ + P++ TYT+
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245
Query: 265 ----------------------------LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
L+N EG +EA ++ E++ GIEP VY
Sbjct: 246 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 305
Query: 297 YNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y + A L++RM GC P+ +Y ++ R G
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + Y LL A+C + ++ A +F + G +Y + I L K G ++A +
Sbjct: 682 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 741
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M +T++++ K + + +KL + M S PNI TY L +R
Sbjct: 742 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 801
Query: 272 EGLCEEAEEIFEQLQ 286
G E+E + ++L+
Sbjct: 802 IGKSIESEPLADKLK 816
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA+ + + P TY +L+ +C + ++++A +F+EM + + P V Y+S
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTE-TYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDGL K G ++ M D QP+ TY+ +I+ K A+ LFN+M+
Sbjct: 381 IDGLCKSGRIPYVWDLIDEM-HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
+PN T+T L++ + G ++A+E+F+ L G +VY YN ++ EA
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499
Query: 305 RLISRMH-MGCEPDRASYNIMVDA 327
++S+M GC PD ++ I++ A
Sbjct: 500 TMLSKMEDNGCIPDAVTFEIIIIA 523
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + + +A + E+ +P TY+ L+ C SG + + EM
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDR 403
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + + Y+S IDGL K G+ +A+ +F +MK +P+T T+T++++ K + A
Sbjct: 404 GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 463
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F ++ + N+ TY +++ ++GL EEA + +++ G PD + ++ A
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
N+ F S PP+ DD ++ ++ + PI+ + + ++++ K H
Sbjct: 24 NSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKI----LDSFA-KMKHYSTA 78
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ L+ + I P T +L+ +C G + +V ++ K G PP V N+ I G
Sbjct: 79 VSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKG 138
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G +KA+ ++ Q + +Y +IN K + A+KL ++ KPN
Sbjct: 139 LCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPN 198
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ Y+ +++A + L EA +F ++ GI DV Y+ L+ EA L++
Sbjct: 199 VVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAG 332
M + P+ +YNI+VDA + G
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEG 283
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ +C+ G L++A + EM + P+ YN +D L K G ++A + M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C +P TY+ +++ Y + A +FN M P++ TYT L+N F + +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRMHMGCEP-DRASYNIM 324
+EA +F+++ + P + Y++L++ + LI MH +P + +Y+ +
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 416 IDGLCKNG 423
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ A C G +++A++V M K + P + Y++ +DG +KA +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P TYT++IN + K AL LF EM P I TY++L++ +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
G ++ +++ G +V Y++L++ A L ++M G P+ +
Sbjct: 387 SGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFT 446
Query: 321 YNIMVDAYGRAG 332
+ I++D + G
Sbjct: 447 FTILLDGLCKGG 458
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 11/223 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A ++ K+A+ +L + P TY+ L+ Y + ++KA+ VF M
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P Y I+G K +A+ +F+ M + P TY+ +I+ K+ +
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L +EM N+ TY++L++ + G + A +F +++ GI P+ + + L++
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453
Query: 304 Y----RLISRMHM-------GCEPDRASYNIMVDAYGRAGLHE 335
RL + G + +YN+M+D + + GL E
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLE 496
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 16/227 (7%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D + L + + L ++ +K+LH + +LL + +Y L+ C G
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALH-----FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA 182
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A + +++ P+ V+Y++ ID L K +A +F M TY+ +I
Sbjct: 183 AIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ K A+ L NEM PN+ TY LV+A +EG +EA+ + + A ++P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 293 DVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAY 328
DV Y+ LM+ Y L+ + MG PD +Y I+++ +
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T +L+ +C G + ++ ++ K G P + + + I+GL G KA+
Sbjct: 959 PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ Q + +Y +IN K + A+KL ++ KP++ Y +++A +
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
L +A +F ++ GI DV YN L+ EA L+++M + P+ +
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138
Query: 321 YNIMVDAYGRAG 332
YNI+VDA + G
Sbjct: 1139 YNILVDALCKEG 1150
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ C +G L++A A+F +M+ G+ P+ + +DGL KGG + A E+FQ +
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE--- 272
+ TY +MI+ + K AL + ++M + C P+ T+ ++ A ++
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDEN 530
Query: 273 ----GLCEEAEEIFEQLQG 287
G ++ EI E +G
Sbjct: 531 GGNVGFDKKVWEIVEHKKG 549
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C+ G + KA ++ G + V Y + I+G+ K G+ + A+++
Sbjct: 994 PDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 1053
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++ +P Y +I+ K A LF EM ++ TY L+ F
Sbjct: 1054 LRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM------------EAYRLISRMH-MGCEPDR 318
G +EA + ++ I P+V YN L+ E+ ++S+M GC+ +
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173
Query: 319 ASYNIMVDA 327
++ I++ A
Sbjct: 1174 VTFEIIISA 1182
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 15/139 (10%)
Query: 204 NPQK----AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
NP K AV + R++ QP T ++IN + + + ++ P+
Sbjct: 937 NPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDT 996
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
T+T L+N +G +A ++L G + + +Y L+ A +L+ +
Sbjct: 997 ITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRK 1056
Query: 310 MHMG-CEPDRASYNIMVDA 327
+ +PD YN ++DA
Sbjct: 1057 IDGRLTKPDVVMYNTIIDA 1075
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G ++ G+ + + M
Sbjct: 128 FNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMH 187
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A ++F+EM PN T+T L++ + G +
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 247
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 248 LAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 326 DAYGRAG 332
D + G
Sbjct: 308 DGCCKEG 314
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 193 PDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 252
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 253 YKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 312
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRAS 320
EG E A E +++ I D AY AL ++A +++ M +G +PD +
Sbjct: 313 EGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGT 372
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 373 YTMIINEFCKKG 384
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++S A + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 200 VLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 259
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K A
Sbjct: 260 SLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETA 319
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M + + YTAL++ +E +AE++ ++ G++PD Y ++
Sbjct: 320 FEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINE 379
Query: 304 Y 304
+
Sbjct: 380 F 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A + EM GL P + Y + IDG K
Sbjct: 253 YKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 312
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + + A K+ EM S KP+ T
Sbjct: 313 EGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGT 372
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQ 286
YT ++N F ++G ++ +++Q
Sbjct: 373 YTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 39/259 (15%)
Query: 88 SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
++PP+ +T+++LIN A G K+A ++ +
Sbjct: 216 AIPPSRSTYNNLIN--------------------------ACGSSGNWKEALNVCKKMTE 249
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ P T+ ++L A+ KA + F M+ + P N I L+K K
Sbjct: 250 NGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 309
Query: 208 AVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A+EIF M K+ C P T+T +I+LY + FN M + KPNI +Y AL
Sbjct: 310 AIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNAL 369
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMG-C 314
+ A+A G+ EA F +++ G PD+ +Y +L+ AY ++ RM
Sbjct: 370 IGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKL 429
Query: 315 EPDRASYNIMVDAYGRAGL 333
+P+ SYN ++DAYG GL
Sbjct: 430 KPNLVSYNALIDAYGSNGL 448
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F + S C P T+ ++ Y + G +E EA F M GL P+ V YN+ I
Sbjct: 314 FNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAY 373
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G +A F +K++ +P +YT ++N YG++ K A ++F+ M+ +K KPN+
Sbjct: 374 AARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNL 433
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+Y AL++A+ GL +A +I +++ GI+P+V + L+ A
Sbjct: 434 VSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAA 477
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 48/256 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +A + E+ + RC P +TY ++ A+ +G A + +M +
Sbjct: 156 MMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRA 215
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEI-------------------------------- 211
+PPS YN+ I+ GN ++A+ +
Sbjct: 216 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKA 275
Query: 212 ---FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICTYTALV 266
F+ MK +P T T ++I+ K + A+++FN MR K C P++ T+T+++
Sbjct: 276 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSII 335
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR---LISRMHM--------GCE 315
+ ++ G E E F + G++P++ +YNAL+ AY + + H+ G
Sbjct: 336 HLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFR 395
Query: 316 PDRASYNIMVDAYGRA 331
PD SY +++AYGR+
Sbjct: 396 PDIVSYTSLLNAYGRS 411
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ AY G+ +A F E+++ G P V Y S ++ + P KA +I
Sbjct: 361 PNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQI 420
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RMKR+ +P+ +Y +I+ YG A+K+ EM +PN+ + L+ A R
Sbjct: 421 FDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGR 480
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ + + + GI+ + AYNA
Sbjct: 481 CSRKVKIDTVLTAAEMRGIKLNTVAYNA 508
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AYG+ KA + + ++ P +Y L+ AY +GLL A + REM + G
Sbjct: 404 LLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEG 463
Query: 185 LPPS-----------------------------------AVVYNSYIDGLLKGGNPQKAV 209
+ P+ V YN+ I + G KA+
Sbjct: 464 IQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAI 523
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+++ M++ + + TYT++I+ K SK AL E+ K + Y++ + A+
Sbjct: 524 GLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAY 583
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+++G EAE F ++ +G PDV Y A+++AY
Sbjct: 584 SKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAY 618
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++++ + ++A +F EM+++ P YN+ I+ + G + A+ I
Sbjct: 152 DIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDD 211
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R PS TY +IN G + AL + +M + P++ T+ +++AF
Sbjct: 212 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQ 271
Query: 275 CEEAEEIFEQLQGAGIEPDVYA-------------YNALMEAYRLISRMHMGCEPDRASY 321
+A FE ++G I PD Y+ +E + + C PD ++
Sbjct: 272 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTF 331
Query: 322 NIMVDAYGRAG 332
++ Y G
Sbjct: 332 TSIIHLYSVCG 342
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C +A + E+ LP S VY+S I K G +A F M
Sbjct: 540 TYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLM 599
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
K C P TYT M++ Y A A LF EM + K + AL+ +F + G
Sbjct: 600 KSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGG 657
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 35/210 (16%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I AY ++ +AE T+ + S C P TY +L AY + EKA A+F EM +
Sbjct: 580 ICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSI 639
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL------------ 233
+ + + KGG P + + + + M+ S + M++
Sbjct: 640 KLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVD 699
Query: 234 -----------------------YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
GK+ K LKLF +M + N+ TY+ L+
Sbjct: 700 MIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLL 759
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G + E+ + ++ AGI P Y+ +
Sbjct: 760 SSGNWRKYLEVLQWMEDAGIHPSKEMYHDI 789
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 55/125 (44%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + +++ Y+ + AY G + +AE+ F M+ G P V Y + +D
Sbjct: 563 EIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAE 622
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +KA +F+ M+ + T ++ + K + L L MR + + +
Sbjct: 623 NWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFF 682
Query: 264 ALVNA 268
+V+A
Sbjct: 683 EMVSA 687
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 18/233 (7%)
Query: 118 MSCVSILLIEAYGQKSL-HKKAEFTYLELL------DSRCIPTEDTYALLLKAYCMSGLL 170
+SCV + K L H+ LELL C+P +Y+ ++ G
Sbjct: 155 LSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDP 214
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+KA A +REM + P+ V+Y+S I L KG KA+E+ RM ++ P+ TYT +
Sbjct: 215 DKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSL 274
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
++ + + + A+K +M S+ +PN+ TY++ ++ + G C EA +IF+ + G+
Sbjct: 275 VHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGL 334
Query: 291 EPDVYAYNALMEAYRL---ISRMH--------MGCEPDRASYNIMVDAYGRAG 332
+PD+ Y++L+ Y + + MH +PD +N ++ A + G
Sbjct: 335 KPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQG 387
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA TY E+LD R +P Y+ ++ A C ++KA V M K G+ P+ Y S +
Sbjct: 216 KAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLV 275
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G +A++ ++M + +P+ TY+ ++ K + A K+F+ M K
Sbjct: 276 HGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLK 335
Query: 257 PNICTYTALVNAFA-----------------------------------REGLCEEAEEI 281
P+I TY++L++ +A ++G +EA +
Sbjct: 336 PDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLV 395
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGR 330
F +++ G++P+ Y+ L+ Y I+RM G P+ +YNIM+ R
Sbjct: 396 FSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFR 455
Query: 331 AG 332
G
Sbjct: 456 TG 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ LL Y + G L + +F M + + P V+N+ I K G +A+ +
Sbjct: 336 PDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLV 395
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M++ +P+ TY+ +IN Y K ++ AL LF EM S+ PN TY ++ R
Sbjct: 396 FSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFR 455
Query: 272 EGLCEEAEEIFEQLQGAG 289
G A+E + Q+ +G
Sbjct: 456 TGRTATAKEFYVQIIKSG 473
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 92/228 (40%), Gaps = 49/228 (21%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL-------- 199
S PT TY +L+ C +G L+ A + K G +++N + GL
Sbjct: 84 SMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDD 143
Query: 200 ------------------------LKG----GNPQKAVEIFQRMKRD--CCQPSTETYTL 229
LKG Q+A+E+ M D C P+ +Y+
Sbjct: 144 AMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYST 203
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ K A + EM + PN+ Y++++ A + ++A E+ +++ G
Sbjct: 204 VIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNG 263
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVD 326
+ P+ + Y +L+ EA + + +M G EP+ +Y+ +D
Sbjct: 264 VTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMD 311
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A ++ +A + ++ P TY+ L+ YC +E A A+F+EM G
Sbjct: 379 LIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNG 438
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKA----VEIFQRMKRD 218
+ P+ + YN + GL + G A V+I + K+D
Sbjct: 439 VSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSGKKD 476
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A + + +KA+ + + + + +P E +Y++LL+ + + L +A VFREM + G
Sbjct: 153 LLSALCKSNNVRKAQEIF-DAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAG 211
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y +D L K G +AVE+ + M C+P++ Y+++++ YG + A+
Sbjct: 212 CDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAI 271
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
F EM K ++ Y AL+ AF + + + ++++ G+ P+ N ++
Sbjct: 272 DTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSM 331
Query: 302 -------EAYRLISRMHMGCEPDRASYNIMVDAY 328
A+R+ RM CEPD +Y +M+ +
Sbjct: 332 IGQGQTDRAFRVFCRMIKLCEPDADTYTMMIKMF 365
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 19/234 (8%)
Query: 112 WDPIVLMSCVSILLIEA-------YGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAY 164
WD + M +L +E Y + + +A +T+ + +P + LL A
Sbjct: 98 WDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSAL 157
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C S + KA+ +F M+ +P Y+ ++G K N +A E+F+ M C P
Sbjct: 158 CKSNNVRKAQEIFDAMKGQFVPDEK-SYSILLEGWGKAPNLPRAREVFREMVEAGCDPDV 216
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +M+++ KA + A+++ EM C+P Y+ LV+ + E E+A + F +
Sbjct: 217 VTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLE 276
Query: 285 LQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ GI+ DV AYNAL+ A+ R++ M G P+ + N+++ +
Sbjct: 277 MAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISS 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T+ ++++ Y + +++A F M KY + P+ +N + L K N +KA EIF
Sbjct: 113 ETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDA 172
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK P ++Y++++ +GKA A ++F EM C P++ TY +V+ + G
Sbjct: 173 MKGQFV-PDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGR 231
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNI 323
+EA E+ +++ P + Y+ L+ Y + R+ G + D +YN
Sbjct: 232 VDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNA 291
Query: 324 MVDAY 328
++ A+
Sbjct: 292 LIGAF 296
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG + + A T+LE+ Y L+ A+C + V +EM
Sbjct: 256 VLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESN 315
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P++ N I ++ G +A +F RM + C+P +TYT+MI ++ + ++ MA
Sbjct: 316 GVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIK-LCEPDADTYTMMIKMFCEKNELEMA 374
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
LK++ M+S + P++ T++AL+ + +A + E++ GI P + L
Sbjct: 375 LKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRL 431
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
++ G S Y+ I+ L K Q ++ M++ + ET+ +M+ Y +A+K
Sbjct: 70 KQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKG-MLNVETFCIMMRKYARANKV 128
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ FN M + PN+ + L++A + +A+EIF+ ++G + PD +Y+ L
Sbjct: 129 DEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFV-PDEKSYSIL 187
Query: 301 MEAY---------RLISR--MHMGCEPDRASYNIMVDAYGRAG 332
+E + R + R + GC+PD +Y IMVD +AG
Sbjct: 188 LEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAG 230
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P DTY +++K +C LE A +++ M+ PS +++ I GL + N KA
Sbjct: 351 CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKAC 410
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+ + M +PS T+ + L K + + LK +E
Sbjct: 411 VVMEEMIEKGIRPSRITFGRLRQLLIKEGREDV-LKFLHE 449
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y +K K+AE E+ S P E TY LL+ AY G E A + ++M
Sbjct: 357 LLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARN 416
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +++ + G QK E+ + MK +P Y +MI+ +GK + A+
Sbjct: 417 VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAM 476
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ ++ M S +P++ T+ L++ + G + A E+FE++Q G P YN ++
Sbjct: 477 ETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSL 536
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
E L+ +M G P+ +Y +VD YG +G
Sbjct: 537 GEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSG 575
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ A G E+AEA+F EM++ GL P +N+ + G + G+ ++A I
Sbjct: 314 PKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESI 373
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M++ P TY L+++ Y + A L +M + +PN ++ ++ ++
Sbjct: 374 ISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRD 433
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAY-RLISRMHMGCEPD 317
G ++ E+ +++ + ++PD + YN + ME Y R++S G EPD
Sbjct: 434 RGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSE---GIEPD 490
Query: 318 RASYNIMVDAYGRAGLHE 335
++N ++D + + G H+
Sbjct: 491 VVTWNTLIDCHRKHGYHD 508
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+ +I A G ++AE + E+ + P + LLK Y G L++AE++ EM K
Sbjct: 320 VAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEK 379
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASK 239
GL P Y +D G + A + ++M+ QP+T ++ ++ Y G+ K
Sbjct: 380 SGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQK 439
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+F L+ EM++ KP+ Y +++ F + + A E ++++ GIEPDV +N
Sbjct: 440 TFEVLR---EMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNT 496
Query: 300 LMEAYR----------LISRMH-MGCEPDRASYNIMVDAYG 329
L++ +R L M G P +YNIM+++ G
Sbjct: 497 LIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 537
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ +S P Y +++ + L+ A + M G+ P V +N+ ID K G
Sbjct: 446 EMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHG 505
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A E+F+ M+ P TY +MIN G+ K L +M+S PN+ TYT
Sbjct: 506 YHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYT 565
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM--------- 312
LV+ + G +A + E ++ AG++P YNAL+ A+ R +S +
Sbjct: 566 TLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISD 625
Query: 313 GCEPDRASYNIMVDAYG 329
G P + N +++A+G
Sbjct: 626 GLRPSLLALNSLINAFG 642
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ +G+ + A TY +L P T+ L+ + G ++A +F EM++
Sbjct: 461 VMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQER 520
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN I+ L + + + +M+ P+ TYT ++++YG + + A
Sbjct: 521 GYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDA 580
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL--- 300
+ M+S KP+ Y AL+NAFA+ GL E+A + + G+ P + A N+L
Sbjct: 581 IDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINA 640
Query: 301 -------MEAYRLISRM-HMGCEPDRASYNIMVDAYGR 330
+EA+ ++ M +PD +Y ++ A R
Sbjct: 641 FGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIR 678
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + G++ + + ++ +P TY L+ Y SG A M+
Sbjct: 531 IMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSA 590
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PSA +YN+ I+ + G ++AV ++ M D +PS +IN +G+ + A
Sbjct: 591 GLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEA 650
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M+ + KP++ TYT L+ A R ++ ++E++ +G PD A L A
Sbjct: 651 FSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSA 710
Query: 304 YRLISR 309
R + R
Sbjct: 711 LRYMKR 716
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 53/231 (22%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C E Y++L+ A G EK F +K L P + YN+ I + + +KA+
Sbjct: 175 CFSYELLYSILIHAL---GRSEKLYEAFILSQKQTLTP--LTYNALIGACARNNDLEKAL 229
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL--KLFNEMRSHKCK----------- 256
+ RM++D Q Y+L+I + +K + L KL+ E+ S K +
Sbjct: 230 NLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIIL 289
Query: 257 ------------------------PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
P T+ A+++A G EEAE IFE+++ G++P
Sbjct: 290 GFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKP 349
Query: 293 DVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ A+NAL++ Y +IS M G PD +Y ++VDAY G
Sbjct: 350 RIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVG 400
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 157 YALLLKAYCMSGLLEKA--EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
Y+L++++ + ++ + ++ E+ + ++ N I G K G+P +A+
Sbjct: 247 YSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSM 306
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
++ P T T+ +I+ G ++ A +F EM+ KP I + AL+ +AR+G
Sbjct: 307 VQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGS 366
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
+EAE I +++ +G+ PD + Y L++AY + R
Sbjct: 367 LKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGR 401
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + H +A + E+ + +P TY +++ + ++ + + +M+ G
Sbjct: 497 LIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQG 556
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + +D G A++ + MK +PS Y +IN + + S A+
Sbjct: 557 LLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAV 616
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ M S +P++ +L+NAF + EA I + ++ ++PDV Y LM+A
Sbjct: 617 NAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKAL 676
Query: 305 RLISRMH-----------MGCEPD 317
+ + GC PD
Sbjct: 677 IRVDKFDKVPAVYEEMILSGCTPD 700
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P + + I L G ++A IF+ MK +P + + ++ Y + A
Sbjct: 311 GLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA 370
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EM P+ TY LV+A+A G E A + +Q++ ++P+ + ++ ++ +
Sbjct: 371 ESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILAS 430
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGR 330
YR L + +PDR YN+M+D +G+
Sbjct: 431 YRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGK 468
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY ++ + G LE A +F EM + G+ P+ V +N IDG K GN A
Sbjct: 265 CSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAE 324
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ ++M C P T+T +I+ Y + + LK+++ M++ PNI TY+ ++NA
Sbjct: 325 AMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINAL 384
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDR 318
++ EA ++ QL+ + + P + YN ++ EA +++ M C PD+
Sbjct: 385 CKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDK 444
Query: 319 ASYNIMVDAYGRAG 332
++ I++ + G
Sbjct: 445 VTFTILIIGHCMKG 458
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ ++ Q A+ +E+ + Y LL G + +A +F+E +
Sbjct: 133 FLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAF 192
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PP+ +N I GL + G +K E+F M+ C P TY +I+ KA++ A
Sbjct: 193 HSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRA 252
Query: 244 LKLFNEMRS-HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L E++S + C P++ TYT++++ F + G E A +FE++ +GIEP V +N L++
Sbjct: 253 CDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLID 312
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ I M C PD ++ ++D Y R G
Sbjct: 313 GFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTG 353
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 13/214 (6%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A F + E L P T+ +L++ C G +EK +F M+ +G P V YN+ I
Sbjct: 181 EAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLI 240
Query: 197 DGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
GL K +A ++ + ++ R+ C P TYT +I+ + K K A LF EM
Sbjct: 241 SGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGI 300
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
+P + T+ L++ F + G AE + E++ PDV + +L++ Y + +G +
Sbjct: 301 EPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLK 360
Query: 316 -----------PDRASYNIMVDAYGRAG-LHEGK 337
P+ +Y+++++A + +HE +
Sbjct: 361 VWDVMKARNVSPNIYTYSVIINALCKDNRIHEAR 394
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + + A + E++ S PT T+ +L+ + G + AEA+ +M Y
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V + S IDG + G+ + ++++ MK P+ TY+++IN K ++ A
Sbjct: 335 CIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEAR 394
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L +++ P Y +++ F + G +EA I +++ PD + L+ +
Sbjct: 395 DLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGH 454
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ RM +GC PD + + +V +AG
Sbjct: 455 CMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAG 493
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ +G+ AE + ++ CIP T+ L+ YC +G + V+ M+
Sbjct: 309 VLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKAR 368
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ Y+ I+ L K +A ++ +++K P Y +I+ + KA A
Sbjct: 369 NVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEA 428
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ EM +C+P+ T+T L+ +G EA +IF+++ G PD ++L+
Sbjct: 429 NVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLV 486
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++++ A C + +A + R+++ + P +YN IDG K GN +A I
Sbjct: 372 PNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVI 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ C+P T+T++I + + AL +F +M + C P+ T ++LV +
Sbjct: 432 VTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLK 491
Query: 272 EGLCEEAEEIFE 283
G EA I +
Sbjct: 492 AGKPSEAFHIVQ 503
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 54/242 (22%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL+++ C GL + E V MR G + V + + G A ++ +
Sbjct: 95 TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + + S+ Y ++N K K A+ LF E + PN T+ L+ R G
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNAL----------------------------------- 300
E+ E+F +Q G PDV YN L
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274
Query: 301 -MEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG-------LHEGKCSYS 341
+ +R + ++ G EP ++N+++D +G+ G +HE SYS
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334
Query: 342 LV 343
+
Sbjct: 335 CI 336
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 82 IWDAFDS--LPPTHATWDDLINVSVQ-LRLNKKWDPIVLMSCVSIL--------LIEAYG 130
+WD + + P T+ +IN + R+++ D + + C + +I+ +
Sbjct: 361 VWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFC 420
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+ +A E+ + RC P + T+ +L+ +CM G + +A +F++M G P +
Sbjct: 421 KAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNI 480
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+S + LLK G P +A I Q D
Sbjct: 481 TISSLVACLLKAGKPSEAFHIVQTASED 508
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S P Y ++ +C +G +++A + EM + P V + I G G +
Sbjct: 403 SDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVE 462
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
A++IF++M C P T + ++ KA K
Sbjct: 463 ALDIFKKMLAIGCAPDNITISSLVACLLKAGK 494
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY+ ++ A C + ++KA V M K G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS + G G P++A+ ++M D +P TY +++ K + A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI P+ Y ++ L+ AY
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G PD +Y ++ ++G E Y
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ + G L+KA + EM G+ P+ V Y+S I L K KA+
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M ++ P+ TY +++ Y + + A+ +M S +P++ TY +L++
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA ++F+ + G++P++ Y L++ Y + MH G P+
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374
Query: 319 ASYNIMVDAYGRAG 332
++I++ AY + G
Sbjct: 375 YVFSILICAYAKQG 388
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG +E A F +M
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P +VYNS I L KA E I + + R C T + +I+ + K +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVIE 497
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I TY+ L++ + G +EA ++ + G++PD YN L+
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y ISRM G PD +YNI++
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++D R P Y L+ + C+ +KA+ + EM G+ + +NS ID K
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G ++ ++F M R +P TY+ +I+ Y A K A KL M S KP+ T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
Y L+N + + E+A +F +++ +G+ PD+ YN +++
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY G +++A VF +MR+ GL P V Y + I L K G + A+
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P Y +I+ K A +L EM + + +++++ +
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++F+ + G++PD+ Y+ L++ Y L +M +G +PD +
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 321 YNIMVDAY 328
YN +++ Y
Sbjct: 552 YNTLINGY 559
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWD 113
IF + IL + R + +TI+ F+S+ +H +I + +R+ K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
I + LI+ Y +A ++ P TY L+ YC +E A
Sbjct: 514 IITYST-----LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+FREM G+ P + YN + GL + A E++ + Q TY ++++
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K + + AL++F + + T+ ++ A + G +EA+++F L G+ PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 294 VYAYNALME 302
V Y+ + E
Sbjct: 689 VRTYSLMAE 697
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL+ Y G L + + M + G+ P+ V++ I K G +A+ +
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M++ P T TY +I + K+ + A++ F +M + P Y +L+++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISR-------MHMGCEPDRAS 320
++A+E+ ++ GI D +N++++++ R+I + +G +PD +
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 321 YNIMVDAYGRAG 332
Y+ ++D Y AG
Sbjct: 517 YSTLIDGYCLAG 528
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P+ ++++I Y K K A+ +F++MR P+ TY ++ +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A FEQ+ + P YN+L+ +A LI M G D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 321 YNIMVDAYGRAG 332
+N ++D++ + G
Sbjct: 482 FNSIIDSHCKEG 493
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ YC++G +++A + M G+ P V YN+ I+G K + A+ +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY +++ + ++ A +L+ + + + TY +++ +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A + R G PD +
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 321 YNIMVD 326
Y++M +
Sbjct: 692 YSLMAE 697
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 17/234 (7%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLE-LLDSRCIPTEDTYALLLKAYCM 166
+ K + P VLM L+I + K+ + + LE +++ C+P T+ +L+ C
Sbjct: 176 IAKGFTPTVLMF---NLVINGFC-KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK 231
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+ + +A+ + +M G P+ V Y++ I+GL K G A E+FQ M+R C P+ T
Sbjct: 232 ANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT 291
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ ++I+ KA + A +L++ MR C P+I TY +L++ + +EA ++F+ +
Sbjct: 292 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 351
Query: 287 GAGIE-PDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMVDAY 328
+G+ + Y+ L Y + RM C PD A+Y ++ Y
Sbjct: 352 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 405
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+E A V + G P+ +++N I+G K + A ++ + M C P+ T+T+
Sbjct: 165 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 224
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I KA++ A +L +M + C PN+ TY+ ++N ++G ++A E+F+ ++
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
P+V +N L+ EA +L RM GC PD +YN ++D
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 333
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY+ ++ C G ++ A +F+ M + PP+ V +N IDGL K
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTY 262
++A +++ RM+ C P TY +I+ K+ + A +LF + S N TY
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 363
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
+ L + +A G +A IF L G PD+ Y +L+ Y SR
Sbjct: 364 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + TY +L++ + +G L+ A + EM+ G +AVV+ + + GL G +A+
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E F+ M +D C P TYT +++ KA K A + EM + C P+ T++ L++
Sbjct: 65 EHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-------AYRLISR-----MHMGCEPD 317
+ G E+A + E + G+ A+ +++ + L S+ + G P
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 318 RASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
+N++++ + +A + +Y L+E+ ++
Sbjct: 184 VLMFNLVINGFCKA--KDLDSAYKLLEVMIE 212
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 92/195 (47%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ A C +G ++A+ + REM G P V +++ IDGL K G+ ++A
Sbjct: 74 CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAF 133
Query: 210 EIFQR-MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ + ++R T++ L K + +A K+ + + P + + ++N
Sbjct: 134 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 193
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
F + + A ++ E + G P+V+ + L+ EA +L+ +M GC P+
Sbjct: 194 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPN 253
Query: 318 RASYNIMVDAYGRAG 332
+Y+ +++ + G
Sbjct: 254 VVTYSTVINGLCKQG 268
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 49/237 (20%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L+D P TY L+ YC + + + EM G PP ++ + GL +G +
Sbjct: 386 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 445
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPN--- 258
++A+++F M C Y L++ +ASK AL + ++ R K P+
Sbjct: 446 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSA 505
Query: 259 --------------------------------ICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ +Y L++ +R +EA ++FE +
Sbjct: 506 VDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMV 565
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
AG P++ N ++ +AY L+ RM +GC PD + N ++ Y ++G
Sbjct: 566 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 622
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
L++E + S H KA +++D R P+ L+++ C G + A+ + +M
Sbjct: 470 LVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKM 529
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G + YN + GL + +A ++F+ M P T ++I+ A+K
Sbjct: 530 SERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKV 589
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +L M C P+I T L+ + + G + A ++ E++ AG+EP+ ++ L
Sbjct: 590 DDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 37/207 (17%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ +L++ R C P T+ +L+ C + +E+A ++ MR+ G P + YNS IDG
Sbjct: 274 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 333
Query: 199 LLKGGNPQKAVEIFQRMKR-------------------------DCCQ-----------P 222
L K +A ++FQ + D C+ P
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
TYT +I Y K S++ ++L EM S P + T +A++ E A ++F
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISR 309
+ + G D YN ++E S+
Sbjct: 454 DSMAARGCTDDALIYNLVVEGMARASK 480
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 83/200 (41%), Gaps = 18/200 (9%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSY 195
++L DS C Y L+++ + KA AV ++ R PS+ ++
Sbjct: 450 IQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDAL 509
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++ L + G A ++ +M + +Y +++ + + A ++F M S
Sbjct: 510 VESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGP 569
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
P I T +++ ++A E+ +++ G PD+ N L+ Y +
Sbjct: 570 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARK 629
Query: 306 LISRM-HMGCEPDRASYNIM 324
L+ M G EP+ +++++
Sbjct: 630 LLEEMTEAGLEPNDTTHDLL 649
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y K KA F Y + + R I PT TY LL+ A + G +++A+ + ++M
Sbjct: 347 LIDGYCNKGDLVKA-FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P ++ YN I+G + GN +KA + M QP+ TYT +I + K ++ A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
LF ++ P++ + AL++ G + A + +++ I PD YN LM
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA L+ M G PD SYN ++ Y + G
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRG 565
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 47/237 (19%)
Query: 143 LELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L+++ +R + P TY L+ C G LE+A + +M++ GL P+AV YN+ IDG
Sbjct: 294 LDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCN 353
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTL-------------------------------- 229
G+ KA M R P+ TY L
Sbjct: 354 KGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSIT 413
Query: 230 ---MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+IN Y + + A L +EM S +P + TYT+L+ ++ + A+++FE++
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473
Query: 287 GAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
G PD+ +NAL++ A+ L+ M PD +YN ++ R G
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREG 530
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ YC G +E A V M+ G+ P + Y S I G+ KGG ++A I
Sbjct: 269 PNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGI 328
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++MK P+ TY +I+ Y A +EM P + TY L++A
Sbjct: 329 LEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFL 388
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EG +EA+ + + + +GI PD YN L+ Y
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGY 421
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +++ K A+ + +++ P + L+ +C +G L++A A+ +EM K
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + G + G ++A E+ + MKR +P +Y +I+ Y K A
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EM S P + TY AL+ + + AEE+ +++ GI PD Y +L+E
Sbjct: 572 TIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 35/323 (10%)
Query: 41 GSLRGKGWKYGSGFVDGIFPV-LSPTAQQILRFVQREVDSNTIWDAFD--------SLPP 91
G +G + SG ++ + + L PTA + + + AF ++ P
Sbjct: 315 GMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILP 374
Query: 92 THATWDDLINVSVQLRLNKKWDP------------IVLMSCVSILLIEAYGQKSLHKKAE 139
T +T++ LI+ L L K D IV S +LI Y + KKA
Sbjct: 375 TVSTYNLLIHA---LFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ E++ PT TY L+ ++ A+ +F ++ + G P +++N+ IDG
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
GN +A + + M + P TY ++ + K A +L EM+ +P+
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
+Y L++ +++ G +A I +++ G P + YNAL++ A L+
Sbjct: 552 ISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKE 611
Query: 310 M-HMGCEPDRASYNIMVDAYGRA 331
M G PD ++Y +++ G+
Sbjct: 612 MVSKGITPDDSTYFSLIEGIGKV 634
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ + T T+ +++ C G L+KA+ M G+ P+ V YN+ I G
Sbjct: 224 YAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCS 283
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G + A + MK +P + TY +I+ K K A + +M+ P T
Sbjct: 284 RGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT 343
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----------- 310
Y L++ + +G +A +++ I P V YN L+ A L +M
Sbjct: 344 YNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG 403
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G PD +YNI+++ Y R G
Sbjct: 404 DSGIVPDSITYNILINGYCRCG 425
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ +L++A C + A F M++ G+ P +N+ + LK + ++ M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R + + T+ +MIN+ K K A M + KPN+ TY +++ + G
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E A + + ++ G+EPD Y Y +L+ EA ++ +M +G P +YN +
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 325 VDAYGRAG 332
+D Y G
Sbjct: 348 IDGYCNKG 355
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
F L+ +D R +P E TY L++ C G +E+A + +EM++ G+ P + YN+ I G
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
K G+ A I M P+ TY +I K + +A +L EM S P+
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620
Query: 259 ICTYTALVNAFAREGLCEEAEE 280
TY +L+ + EA +
Sbjct: 621 DSTYFSLIEGIGKVDDSSEASD 642
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 39/272 (14%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEF-----TYLEL- 145
TH + D I S Q L K P + S +S L+ SLHKK++ T++
Sbjct: 57 THQSLLDSIQSS-QWHLIKHLAPNLSPSLISATLL------SLHKKSDLALQFVTHIGFK 109
Query: 146 ---LDSRCI--------PTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVV 191
+ ++C+ P+ + LLK + + + VF E+ R S++V
Sbjct: 110 GLDIKTKCLAVAVVSRSPSPKSTLHLLKQ-TIESRVAGVKDVFHELAITRDRLGTKSSIV 168
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
++ I + A E F MK P ET+ M++L+ K +++ L+ EM
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
K K + T+ ++N +EG ++A++ ++ G++P+V YN ++ Y
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288
Query: 305 --RLISRM--HMGCEPDRASYNIMVDAYGRAG 332
R++ + + G EPD +Y ++ + G
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGG 320
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
+P +T+ +L + E ++ EM + + + +N I+ L K G +KA
Sbjct: 197 VVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAK 256
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M+ +P+ TY +I+ Y + A + + M++ +P+ TY +L++
Sbjct: 257 DFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGM 316
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ G EEA I E+++ G+ P YN L++ Y
Sbjct: 317 CKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY 351
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L++A + EM G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT +VN F ++G + ++ +++Q G P V YN LM
Sbjct: 373 KMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTY 262
A+EI+++M P TY +I YG K + A L +EM KP+ TY
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLI--YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 320
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
T L++ +EG + A E +++ I D AY AL+ +A +++ M
Sbjct: 321 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD +Y ++V+ + + G
Sbjct: 381 VGLKPDTGTYTMIVNEFCKKG 401
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 VNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY+ ++ A C + ++KA V M K G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS + G G P++A+ ++M D +P TY +++ K + A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI P+ Y ++ L+ AY
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G PD +Y ++ ++G E Y
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ + G L+KA + EM G+ P+ V Y+S I L K KA+
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M ++ P+ TY +++ Y + + A+ +M S +P++ TY +L++
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA ++F+ + G++P++ Y L++ Y + MH G P+
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374
Query: 319 ASYNIMVDAYGRAG 332
++I++ AY + G
Sbjct: 375 YVFSILICAYAKQG 388
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P+ ++++I Y K K A+ +F++MR P+ TY ++ +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G E+A FEQ+ + P YN+L+ +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG +E A F +M
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
L P +VYNS I L KA + F +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ + +G ++A +FR+M + G+ P+ + N+ +DGL K G +AVE
Sbjct: 391 PNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK + + TYT +I+ + + A++ F EM S C P+ Y +L++
Sbjct: 451 FNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCI 510
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRM-HMGCEPDRAS 320
G +A + +L+ AG D YN L+ Y L++ M G +PD +
Sbjct: 511 AGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570
Query: 321 YNIMVDAYGRAG 332
YN ++ G+ G
Sbjct: 571 YNTLISYLGKTG 582
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRK------YGLPPSAVVYNSYIDGLLKGGNP 205
P+ T+ +L+ C + +++A VF +R G+ P V++N+ IDGL K G
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373
Query: 206 QKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ + + + MK + +P+T TY +I+ + KA A +LF +M +PN+ T
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------G 313
LV+ + G A E F +++G G++ + Y AL+ A+ ++ ++ G
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493
Query: 314 CEPDRASYNIMVDAYGRAG 332
C PD Y ++ AG
Sbjct: 494 CSPDAVVYYSLISGLCIAG 512
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 13/209 (6%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
+H+ EF + E+ TY L+ A+C + +A F EM G P AVVY
Sbjct: 444 VHRAVEF-FNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYY 502
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S I GL G A + ++K Y ++I+ + K K +L EM
Sbjct: 503 SLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEET 562
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
KP+ TY L++ + G A ++ E++ G+ P V Y A++ AY + G
Sbjct: 563 GVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEG 622
Query: 314 CE------------PDRASYNIMVDAYGR 330
+ P+ YNI++DA R
Sbjct: 623 MKIFGEMCSTSKVPPNTVIYNILIDALCR 651
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 12/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ + +A + E+L S C P Y L+ C++G + A V +++ G
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAG 528
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
YN I G K ++ E+ M+ +P T TY +I+ GK A
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATAS 588
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF-EQLQGAGIEPDVYAYNALMEA 303
K+ +M +P++ TY A+++A+ + +E +IF E + + P+ YN L++A
Sbjct: 589 KVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDA 648
Query: 304 Y-------RLISRMH----MGCEPDRASYNIMV 325
R IS M P+ +YN ++
Sbjct: 649 LCRNNDVDRAISLMEDMKVKRVRPNTTTYNAIL 681
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD------CCQPS 223
+++ + EM K + PS V + ++ L K +A+++F R++ +P
Sbjct: 297 IKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPD 356
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKC-KPNICTYTALVNAFAREGLCEEAEEIF 282
+ +I+ K K L L EM+ +PN TY L++ F + G + A E+F
Sbjct: 357 VVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELF 416
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAY 328
Q+ G++P+V N L++ R+H G + + A+Y ++ A+
Sbjct: 417 RQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAF 473
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
SC ++L+ +K L + E E+ ++ P TY L+ +G A V
Sbjct: 534 SCYNVLISGFCKKKKLERVYEL-LTEMEETGVKPDTITYNTLISYLGKTGDFATASKVME 592
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKA 237
+M K GL PS V Y + I N + ++IF M P+T Y ++I+ +
Sbjct: 593 KMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRN 652
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A+ L +M+ + +PN TY A++ + + +A E+ +++ PD
Sbjct: 653 NDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITM 712
Query: 298 NALME 302
L E
Sbjct: 713 EVLTE 717
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P+ TY ++ AYC +++ +F EM +PP+ V+YN ID L + + +A+
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + MK +P+T TY ++ A +L + M C+P+ T L +
Sbjct: 661 LMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLS 720
Query: 271 REGLCEEAEEIFEQLQ 286
G E+ + E Q
Sbjct: 721 AVGEIEKLKHFVEGYQ 736
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG------AGIEPDVYAYN 298
+L EM K +P++ T+ LVN + +EA ++F++L+G G+EPDV +N
Sbjct: 302 ELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFN 361
Query: 299 ALM----------EAYRLISRMHMG--CEPDRASYNIMVDAYGRAG 332
L+ + L+ M MG P+ +YN ++D + +AG
Sbjct: 362 TLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAG 407
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A V + + G A N+ + L +G + ++ E+ M++ +PS T+ +++N
Sbjct: 265 AWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVN 324
Query: 233 LYGKASKSFMALKLFNEMRSH------KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
KA + AL++F+ +R +P++ + L++ + G E+ + E+++
Sbjct: 325 HLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMK 384
Query: 287 GAGIE-PDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
I P+ YN L++ A+ L +M+ G +P+ + N +VD + G
Sbjct: 385 MGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHG 442
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S+ P Y +L+ A C + +++A ++ +M+ + P+ YN+ + G+ K
Sbjct: 633 SKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHK 692
Query: 208 AVEIFQRMKRDCCQP---STETYTLMINLYGKASK 239
A E+ RM + C+P + E T ++ G+ K
Sbjct: 693 AFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY L+ C +E+A + R + G+ P +NS I GL
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N + A+E+F+ M+ C+P TY ++I+ K AL + +M C ++ TY
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
L++ F + EAEEIF++++ G+ + YN L+ +A +L+ +M M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +PD+ +YN ++ + R G
Sbjct: 535 GQKPDKYTYNSLLTHFCRGG 554
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 159 LLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+++ +C G +E A +EM + G P +N+ ++GL K G+ + A+EI M +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ P TY +I+ K + A+++ ++M + C PN TY L++ +E EE
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 278 AEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVD 326
A E+ L GI PDV +N+L++ A L M GCEPD +YN+++D
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 327 AYGRAG 332
+ G
Sbjct: 444 SLCSKG 449
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T+ L+ C +G ++ A + M + G P YNS I GL K G ++AVE+
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M C P+T TY +I+ K ++ A +L + S P++CT+ +L+
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI----- 407
Query: 272 EGLC-----EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCE 315
+GLC A E+FE+++ G EPD + YN L+ EA ++ +M + GC
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 316 PDRASYNIMVDAYGRA 331
+YN ++D + +A
Sbjct: 468 RSVITYNTLIDGFCKA 483
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H+ A + E+ C P E TY +L+ + C G L++A + ++M G S + YN+
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDG K ++A EIF M+ ++ TY +I+ K+ + A +L ++M
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
KP+ TY +L+ F R G ++A +I + + G EPD+ Y L+
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S C + TY L+ +C + +AE +F EM +G+ ++V YN+ IDGL K +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ +M + +P TY ++ + + A + M S+ C+P+I TY L++
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCE-- 315
+ G E A ++ +Q GI +AYN ++ EA L M E
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Query: 316 PDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
PD SY I+ G + LVEL K +
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+KA C + L A + +M YGL P + + + G ++ G+ A+ I
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFA 270
++M C S + ++++ + K + AL EM + P+ T+ LVN
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ G + A EI + + G +PDVY YN+++ EA ++ +M C P+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 320 SYNIMV 325
+YN ++
Sbjct: 367 TYNTLI 372
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
++LIE+Y Q L + ++D + P Y +L L+ E +M
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+G+ P +N I L + + A+ + + M P +T+T ++ Y +
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-GIEPDVYAYNAL 300
AL++ +M C + + +V+ F +EG E+A +++ G PD Y +N L
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ A ++ M G +PD +YN ++ + G
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 183 YGLPPSAVVYNS---YIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKAS 238
+ P SA + ++ +D L + A+ +F K+ P Y ++ G++
Sbjct: 38 FASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSG 97
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE-QLQGAGIEPDVYAY 297
K+ +M+S +C+ T+ L+ ++A+ L +E + + + G++PD + Y
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 298 NALM------EAYRLISRMHM-----GCEPDRASYNIMVDAYGRA 331
N ++ + +L+ H G +PD +++N+++ A RA
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRA 202
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA + + C P TY L+ C +G +E A + R ++ G+ + YN
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 196 IDGLLKGGNPQKAVEIFQRM 215
I GL + +A+ +F+ M
Sbjct: 617 IQGLFRKRKTTEAINLFREM 636
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+ AYG+ ++A + E+LD+ PT Y +LL A+ +SG++E+A+ VF+ MR+
Sbjct: 316 LLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRD 375
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P Y + + + + + A + F+R+ +D +P+ TY +I Y K + M
Sbjct: 376 RYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMV 435
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+K + EM K N T +++A+ + G + A F++++ GI PD A N L+
Sbjct: 436 MKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLL 493
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 20/254 (7%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W+ ++ + LR WD +LI AYG+ AE + + P
Sbjct: 116 WNLVVEILEWLRTQNWWD---FGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVV 172
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ L++AY G AEA+FR M+K+G PSA Y + ++G ++A E+F +
Sbjct: 173 SQTALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDNL 232
Query: 216 KRD---CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
D +P + + +MI ++ KA A K F +M + TY +L+ + E
Sbjct: 233 LNDENSPLKPDQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLM---SFE 289
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASY 321
+E I++Q+Q A + PDV +Y L+ AY R + G P R +Y
Sbjct: 290 TNYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAY 349
Query: 322 NIMVDAYGRAGLHE 335
NI++DA+ +G+ E
Sbjct: 350 NILLDAFSISGMVE 363
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 18/244 (7%)
Query: 101 NVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD---SRCIPTEDTY 157
N R +KW P I+L + + Q + ++AE + LL+ S P + +
Sbjct: 189 NAEAIFRRMQKWGPEPSAFTYQIIL-KTFVQGNKFREAEELFDNLLNDENSPLKPDQKMF 247
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+++ + +G EKA F +M + G+ + V YNS + N ++ I+ +M+R
Sbjct: 248 NMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLMSF---ETNYKEVSNIYDQMQR 304
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+P +Y L+++ YGKA + AL +F EM +P Y L++AF+ G+ E+
Sbjct: 305 ADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQ 364
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVD 326
A+ +F+ ++ PD+ +Y ++ AY + R+ G EP+ +Y ++
Sbjct: 365 AQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIK 424
Query: 327 AYGR 330
Y +
Sbjct: 425 GYAK 428
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ + P +YALL+ AY + E+A AVF EM G+ P+ YN
Sbjct: 292 YKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNI 351
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD P +YT M++ Y A A K F +
Sbjct: 352 LLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDG 411
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRM 310
+PN+ TY L+ +A+ E + +E++ GI+ + +M+AY S +
Sbjct: 412 FEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAV 471
Query: 311 HM-------GCEPDRASYNIMV 325
H G PD+ + N+++
Sbjct: 472 HWFKEMESNGIPPDQKAKNVLL 493
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 47/114 (41%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C ++ AY + AE + L+ P TY L+K Y LE + E
Sbjct: 382 CSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEE 441
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
M G+ + + + +D K G+ AV F+ M+ + P + ++++L
Sbjct: 442 MLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSL 495
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 11/228 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + AE + LL+ +P TY+ L+ +C G + K E + +EM +
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +VY+S +DG K G +A+++ ++M + P+ Y +I+ Y KA + +AL
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF EM+S + N + VN R G EEA+E+F+ + G+ PD Y ++M
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377
Query: 302 -------EAYRLISRMHMGCEP-DRASYNIMVDAYGRAGLHEGKCSYS 341
+A+ + M D +YN++++ + G +E + ++
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY + + A + Y E+ +P TY ++ C SG +E+A++VFREM + G
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 185 LPPS-----------------------------------AVVYNSYIDGLLKGGNPQKAV 209
+ P+ VVY + +DGL K G A
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++FQ + + P+ TY+ +I+ + K L EM PN+ Y+++V+ +
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++GL EA ++ ++ I P+V+ Y L++ Y
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ YC +G + +A + M+ G P V YN+ ++G K G+ A ++ +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ TYT +I+ Y K+ AL +++EM P++ TYT ++N + G E
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
EA+ +F +++ G+ P+ ++Y L+ EA+ L RM + G D Y ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 326 DAYGRAGL 333
D +AG+
Sbjct: 200 DGLFKAGM 207
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ AYC G L A + EM+ YGL P+++ N + L G +K +++
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P+ T+ +++ K+ ++ + L +++ K ++ TY L++ F R
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCR 553
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G+ A +F+ + G GI D+ YNAL+ Y + S + G P+ +
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613
Query: 321 YNIMVDAYGRAGL 333
YNI++ A L
Sbjct: 614 YNILLGGLSAARL 626
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + + ++A + +++ + TY L+ YC+S L+KA AV +M G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN + GL ++A + +MK P+ TY ++++ +GK +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL+ EM + P TY L++ FA+ +A+E+ +++Q GI P+ Y+ L+ +
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726
Query: 305 RLISR 309
+S+
Sbjct: 727 YKLSK 731
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ AYC S LE A ++ EM L P V Y ++GL K G ++A +
Sbjct: 85 PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P+ +Y +I+ K A L M ++ YTAL++ +
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G+ AE++F+ L + P+ Y+AL++ + + ++ G P+
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264
Query: 321 YNIMVDAYGRAGL 333
Y+ +VD Y + GL
Sbjct: 265 YSSIVDGYTKKGL 277
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C G++ +A VF++M G+ + YN+ I G + +KA + +M
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM 602
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ ETY +++ A A L N+M+ PN TY LV+ + G
Sbjct: 603 LTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNM 662
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
+E +++ ++ G P YN L+ +A L+ M + G P+ ++Y+I+
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722
Query: 325 V 325
+
Sbjct: 723 I 723
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C G L A+ + E+ L P+ + Y + ID K + A+ +
Sbjct: 50 PDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYM 109
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P TYT ++N K+ K A +F EM PN +Y L+++ +
Sbjct: 110 YDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK 169
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EG EA + ++ GI DV Y ALM+
Sbjct: 170 EGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
S E + ++I+ Y + + A++L M++ P+I TY L+N F + G A+++
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 283 EQLQGAGIEPDVYAYNALMEAY 304
++ +EP+V Y L++AY
Sbjct: 76 GEISLVNLEPNVITYTTLIDAY 97
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 12/174 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ L K+A ++ + +P TY +L+ + G +++ ++ EM
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---- 239
G P YN I KG +A E+ Q M+ P++ TY ++I + K SK
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735
Query: 240 --------SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
A +LF EM P T + A+ G +A+ I +L
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W + ++L ++P V+ V L+ YG+ K AE T+LE+L C P
Sbjct: 153 WRQARDFFAWMKLQLCYEPSVVAYTV---LLRLYGRVGKVKLAEETFLEMLQVGCEPDAV 209
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
LL AY G E + +R GL P VYN I L K K + ++++M
Sbjct: 210 ACGTLLCAYARWGRHEDMMLFYSAVRGRGLVPPISVYNYMISSLQKQKLHGKVIHVWKQM 269
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TYT++I K A+ LF EMR + P TY+ L++A +R G
Sbjct: 270 LEAGAPPNQFTYTVVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKG 329
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIM 324
E+A +FE+++G GI P Y +L+ +A L S M PD Y I+
Sbjct: 330 EQALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKALALFSDMESSKVIPDEVIYGIL 389
Query: 325 VDAYGRAGLHE 335
+ YG+ GL+E
Sbjct: 390 IRIYGKLGLYE 400
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 134 LHKKAEFTYLELLDSRCIPTE---DT--YALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L K +F +E + C E DT Y +K+ SG L A +++ M G+ S
Sbjct: 721 LTKHGKFQEVENIMHGCFRDEVQLDTALYNTFIKSMLESGKLHSAVSIYDRMVSSGVSQS 780
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
+N+ I KGG KAVE+F + + YT M++LYGKA + A +F
Sbjct: 781 MQTFNTMISVYGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFK 840
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
M+ +P ++ +++NA+A GL EA+ +F+++Q G PD ++Y AL+ AY
Sbjct: 841 RMKEDGIRPGKISFNSMINAYATSGLFSEAKSVFQEMQDCGHAPDSFSYLALIRAY 896
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ LH K + ++L++ P + TY +++ + LLE+A +F EMR+
Sbjct: 249 MISSLQKQKLHGKVIHVWKQMLEAGAPPNQFTYTVVIGSLVKEDLLEEAVDLFGEMRRRR 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y+ I + G ++A+ +F+ MK PS T ++ L+ K AL
Sbjct: 309 FVPEEATYSLLISASSRHGKGEQALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKAL 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF++M S K P+ Y L+ + + GL EEA + F +++ AG+ D Y A+ + +
Sbjct: 369 ALFSDMESSKVIPDEVIYGILIRIYGKLGLYEEARQTFGEIEKAGLLNDEQTYVAMAQVH 428
Query: 305 R-----------LISRMHMGCEPDRASYNIMV 325
L S G +P R SY+ ++
Sbjct: 429 LNAGDCDRALEVLESMKTRGVKPSRFSYSALL 460
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + ++ L ++A + E+ R +P E TY+LL+ A G E+A +F EM+
Sbjct: 283 VVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEEMKGQ 342
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS S + K + KA+ +F M+ P Y ++I +YGK A
Sbjct: 343 GIAPSNYTCASLLALHCKNEDYPKALALFSDMESSKVIPDEVIYGILIRIYGKLGLYEEA 402
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ F E+ + TY A+ G C+ A E+ E ++ G++P ++Y+AL+
Sbjct: 403 RQTFGEIEKAGLLNDEQTYVAMAQVHLNAGDCDRALEVLESMKTRGVKPSRFSYSALLRC 462
Query: 302 -----------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ +R +S+ G PD N M+ Y R G
Sbjct: 463 HVAKEDVVAAEDTFRALSQSQHGL-PDAFCCNDMLRLYMRLG 503
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++ S + T+ ++ Y G L+KA +F ++ GLP +Y + + K
Sbjct: 769 YDRMVSSGVSQSMQTFNTMISVYGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGK 828
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G Q+A +F+RMK D +P ++ MIN Y + A +F EM+ P+ +
Sbjct: 829 AGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLFSEAKSVFQEMQDCGHAPDSFS 888
Query: 262 YTALVNAFAREGLCEEAEEIFE--QLQGAGIEPDVYAYNALM----------EAYRLISR 309
Y AL+ A+ L EAEE L + P ++ L+ EA R+ +
Sbjct: 889 YLALIRAYTEAKLYTEAEEAIRTMTLSSSNTTPSCPHFSHLILAFLKEGRVGEARRIYGQ 948
Query: 310 -MHMGCEPDRASYNIMVDAYGRAGL 333
M +G PD A M+ Y GL
Sbjct: 949 MMEVGVAPDLACCRAMMRVYVDRGL 973
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 48/272 (17%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
LN D +S VS LLI ++ +A F Y +L + P + A L+ Y +
Sbjct: 597 LNSLLDMPGGLSSVS-LLISRLAREGSTDEARFIYDQLTELGTKPDDSAVATLIVQYGQA 655
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK----------- 216
LE+A+ +F + P A+V N+ +D K G + A +F M
Sbjct: 656 KQLERAQELF-DSASASFPDGALVCNAMVDAFCKCGRAEDAYHLFMEMADQGSYRNAVTA 714
Query: 217 ------------------------RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
RD Q T Y I ++ K A+ +++ M S
Sbjct: 715 SILVTHLTKHGKFQEVENIMHGCFRDEVQLDTALYNTFIKSMLESGKLHSAVSIYDRMVS 774
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
++ T+ +++ + + G ++A E+F Q G+ D Y ++ E
Sbjct: 775 SGVSQSMQTFNTMISVYGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQE 834
Query: 303 AYRLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
A + RM G P + S+N M++AY +GL
Sbjct: 835 ASLMFKRMKEDGIRPGKISFNSMINAYATSGL 866
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 6/193 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ YG+ H++A + + + P + ++ ++ AY SGL +A++VF+EM+ G
Sbjct: 822 MLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLFSEAKSVFQEMQDCG 881
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ--PSTETYTLMINLYGKASKSFM 242
P + Y + I + +A E + M PS ++ +I + K +
Sbjct: 882 HAPDSFSYLALIRAYTEAKLYTEAEEAIRTMTLSSSNTTPSCPHFSHLILAFLKEGRVGE 941
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +++ +M P++ A++ + GL ++ ++E G+ ++PD + +A
Sbjct: 942 ARRIYGQMMEVGVAPDLACCRAMMRVYVDRGLVDDGISLYETTCGS-LKPDSFVLSA--- 997
Query: 303 AYRLISRMHMGCE 315
A+ L R CE
Sbjct: 998 AFHLYERAGRECE 1010
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 58/251 (23%)
Query: 136 KKAEFTYLELLDSRC-------IPTEDTYALL----------------LKAYCMSGLLEK 172
K + F+Y LL RC + EDT+ L L+ Y G L+K
Sbjct: 450 KPSRFSYSALL--RCHVAKEDVVAAEDTFRALSQSQHGLPDAFCCNDMLRLYMRLGRLDK 507
Query: 173 AEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
A A+ + R+ G + + ++ K G + A ++ + ++R+ T L++
Sbjct: 508 ARALVSVLLREDGFQLDENLSTTVMEFYCKSGMVEDAEKLLEDIQRNRKPVKVPTLLLLV 567
Query: 232 NLYGK-----------------ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+Y + +S + +AL +M + + + L++ AREG
Sbjct: 568 EMYARNRPSVVLEERSSSRALGSSAASVALNSLLDM-----PGGLSSVSLLISRLAREGS 622
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE---------PDRASY-NIM 324
+EA I++QL G +PD A L+ Y ++ E PD A N M
Sbjct: 623 TDEARFIYDQLTELGTKPDDSAVATLIVQYGQAKQLERAQELFDSASASFPDGALVCNAM 682
Query: 325 VDAYGRAGLHE 335
VDA+ + G E
Sbjct: 683 VDAFCKCGRAE 693
>gi|293334337|ref|NP_001169631.1| uncharacterized protein LOC100383512 [Zea mays]
gi|224030539|gb|ACN34345.1| unknown [Zea mays]
gi|413953501|gb|AFW86150.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 790
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W + ++L ++P V+ V L+ YG+ K AE T+LE+L C P
Sbjct: 153 WRQARDFFAWMKLQLCYEPSVVAYTV---LLRLYGRVGKVKLAEETFLEMLQVGCEPDAV 209
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
LL AY G E + +R GL P VYN I L K K + ++++M
Sbjct: 210 ACGTLLCAYARWGRHEDMMLFYSAVRGRGLVPPISVYNYMISSLQKQKLHGKVIHVWKQM 269
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TYT++I K A+ LF EMR + P TY+ L++A +R G
Sbjct: 270 LEAGAPPNQFTYTVVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKG 329
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIM 324
E+A +FE+++G GI P Y +L+ +A L S M PD Y I+
Sbjct: 330 EQALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKALALFSDMESSKVIPDEVIYGIL 389
Query: 325 VDAYGRAGLHE 335
+ YG+ GL+E
Sbjct: 390 IRIYGKLGLYE 400
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ LH K + ++L++ P + TY +++ + LLE+A +F EMR+
Sbjct: 249 MISSLQKQKLHGKVIHVWKQMLEAGAPPNQFTYTVVIGSLVKEDLLEEAVDLFGEMRRRR 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y+ I + G ++A+ +F+ MK PS T ++ L+ K AL
Sbjct: 309 FVPEEATYSLLISASSRHGKGEQALRLFEEMKGQGIAPSNYTCASLLALHCKNEDYPKAL 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF++M S K P+ Y L+ + + GL EEA + F +++ AG+ D Y A+ + +
Sbjct: 369 ALFSDMESSKVIPDEVIYGILIRIYGKLGLYEEARQTFGEIEKAGLLNDEQTYVAMAQVH 428
Query: 305 R-----------LISRMHMGCEPDRASYNIMV 325
L S G +P R SY+ ++
Sbjct: 429 LNAGDCDRALEVLESMKTRGVKPSRFSYSALL 460
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + ++ L ++A + E+ R +P E TY+LL+ A G E+A +F EM+
Sbjct: 283 VVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEEMKGQ 342
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS S + K + KA+ +F M+ P Y ++I +YGK A
Sbjct: 343 GIAPSNYTCASLLALHCKNEDYPKALALFSDMESSKVIPDEVIYGILIRIYGKLGLYEEA 402
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ F E+ + TY A+ G C+ A E+ E ++ G++P ++Y+AL+
Sbjct: 403 RQTFGEIEKAGLLNDEQTYVAMAQVHLNAGDCDRALEVLESMKTRGVKPSRFSYSALLRC 462
Query: 302 -----------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ +R +S+ G PD N M+ Y R G
Sbjct: 463 HVAKEDVVAAEDTFRALSQSQHGL-PDAFCCNDMLRLYMRLG 503
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
LN D +S VS LLI ++ +A F Y +L + P + A L+ Y +
Sbjct: 597 LNSLLDMPGGLSSVS-LLISRLAREGSTDEARFIYDQLTELGTKPDDSAVATLIVQYGQA 655
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
LE+A+ +F + P A+V N+ +D K G + A +F M + T
Sbjct: 656 KQLERAQELF-DSASASFPDGALVCNAMVDAFCKCGRAEDAYHLFMEMADQGSYRNAVTA 714
Query: 228 TLMINLYGKASKSFMALKLFNEMRS--HKC-KPNICTYTALVNAFAREGL 274
++++ K K F E+ + H C + + TAL N F + L
Sbjct: 715 SILVTHLTKHGK-------FQEVENIMHGCFRDEVQLDTALYNTFIKSML 757
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 58/251 (23%)
Query: 136 KKAEFTYLELLDSRC-------IPTEDTYALL----------------LKAYCMSGLLEK 172
K + F+Y LL RC + EDT+ L L+ Y G L+K
Sbjct: 450 KPSRFSYSALL--RCHVAKEDVVAAEDTFRALSQSQHGLPDAFCCNDMLRLYMRLGRLDK 507
Query: 173 AEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
A A+ + R+ G + + ++ K G + A ++ + ++R+ T L++
Sbjct: 508 ARALVSVLLREDGFQLDENLSTTVMEFYCKSGMVEDAEKLLEDIQRNRKPVKVPTLLLLV 567
Query: 232 NLYGK-----------------ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+Y + +S + +AL +M + + + L++ AREG
Sbjct: 568 EMYARNRPSVVLEERSSSRALGSSAASVALNSLLDMPG-----GLSSVSLLISRLAREGS 622
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE---------PDRASY-NIM 324
+EA I++QL G +PD A L+ Y ++ E PD A N M
Sbjct: 623 TDEARFIYDQLTELGTKPDDSAVATLIVQYGQAKQLERAQELFDSASASFPDGALVCNAM 682
Query: 325 VDAYGRAGLHE 335
VDA+ + G E
Sbjct: 683 VDAFCKCGRAE 693
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 97/182 (53%), Gaps = 13/182 (7%)
Query: 167 SGLLEKAEAVFREMRKYGLP-PSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPST 224
+G ++ A V EM+K + P+ + Y++ I+GL G ++A+E+F+ M +D P
Sbjct: 256 NGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDA 315
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TY +IN + K ALK+ M+ + C PN+ Y+AL+N F +EG EEA+E+F++
Sbjct: 316 LTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDE 375
Query: 285 LQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
++ G++PD Y L+ EA L+ M C D ++N+++ R G
Sbjct: 376 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGR 435
Query: 334 HE 335
E
Sbjct: 436 FE 437
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 81/155 (52%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ +P TY L+ +C +++A + M+K G P+ Y++ ++G K G ++A
Sbjct: 310 QILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEA 369
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+F MK +P T YT +IN + +A + A++L +M +KC+ + T+ ++
Sbjct: 370 KEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGG 429
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
REG EEA + E+L G+ + +Y ++ +
Sbjct: 430 LCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNS 464
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y+ L+ +C G LE+A+ VF EM+ GL P V Y + I+ + G +A+
Sbjct: 346 CNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAM 405
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ + M + C+ T T+ +++ + + A + + N +Y ++N+
Sbjct: 406 ELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSL 465
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----EAYR-------LISRMHMGCEPDR 318
REG ++A ++ + G G+ P N L+ EA + L+ + +G +P+
Sbjct: 466 CREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEP 525
Query: 319 ASYNIMVDAYGR 330
S+ ++V+ R
Sbjct: 526 NSWALLVELICR 537
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD R P TY+ ++ A C ++KA V M K G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YNS + G P++A+ ++M+ D +P TY +++ K +S A
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F+ M +P+I TY L+ +A +G E + + + GI PD + +N L+
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA + S+M G P+ +Y ++ ++G
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ + G +KA + + EM + P V Y+S I L KG KA+E+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P+ TY +++ Y + + A+ +MRS +P++ TY +L++ +
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHM--------GCEPDRAS 320
G EA +IF+ + G+EPD+ Y L++ Y + MH G PD
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Query: 321 YNIMVDAYGR 330
+NI++ AY +
Sbjct: 374 FNILICAYAK 383
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG ++ A F +M
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P+ +VY S I L KA E I + + R C +T + +I+ + K +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL-NTIFFNSIIHSHCKEGRVIE 494
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KPN+ TY+ L++ + G +EA ++ + G++PD YN L+
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y +SRM G P+ +YNI++
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ AY +++A VF +MR++GL P+ V Y + I L K G+ A+
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P+ YT +I+ K A +L EM N + +++++ +
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++F+ + G++P+V Y+ L++ Y L +M +G +PD +
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 321 YNIMVDAYGRA 331
YN +++ Y R
Sbjct: 549 YNTLINGYCRV 559
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A + KA ++ + +P TY +L YC S ++A ++MR G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY----------------- 227
+ P V YNS +D L K G +A +IF M + +P TY
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356
Query: 228 ------------------TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++I Y K K A+ +F++MR H PN+ TY A++
Sbjct: 357 ALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G ++A FEQ+ G+ P++ Y +L+ +
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE LE+LD + ++ ++C G + ++E +F M + G+ P+ + Y++ I
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG G +A ++ M +P TY +IN Y + S+ AL LF EM S
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PNI TY ++ A+E++ + +G + ++ YN ++ EA R+
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ + + + ++NIM+ A + G
Sbjct: 639 FQNLCLTDLQLETRTFNIMIGALLKVG 665
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + +++D P Y L+ + C+ +KAE + EM G+ + + +NS I
Sbjct: 425 AMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
K G ++ ++F M R +P+ TY+ +I+ Y A K A KL + M S KP
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ TY L+N + R ++A +F+++ +G+ P++ YN +++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSYIDGLLKGGNPQ 206
C+P + +LLK C ++A + M R G P V Y + I+G K G+
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA + M P TY+ +I K A+++ M + PN TY +++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ + +EA ++++ G+EPDV YN+LM EA ++ M G E
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 316 PDRASYNIMVDAYGRAG 332
PD A+Y ++ Y G
Sbjct: 334 PDIATYCTLLQGYATKG 350
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWD 113
IF + IL + R + NTI+ F+S+ +H +I + +R+ K +
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIF--FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
I + LI+ Y +A + P TY L+ YC ++ A
Sbjct: 511 VITYST-----LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
A+F+EM G+ P+ + YN + GL A E++ + + Q TY ++++
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K + + AL++F + + T+ ++ A + G +EA+++F L G+ PD
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 685
Query: 294 VYAYNALME 302
V Y+ + E
Sbjct: 686 VRTYSLMAE 694
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+ PT TY +L+ C +G L+ A + K G A+ + + GL A
Sbjct: 82 KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141
Query: 209 VEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPNICTYTA 264
++I +RM C P + T+++ ++S AL+L + M R P++ +YT
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMG 313
++N F +EG ++A + ++ I PDV Y++++ A L + + G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 314 CEPDRASYNIMVDAY 328
P+ +YN ++ Y
Sbjct: 262 VMPNCMTYNSILHGY 276
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++++ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320
Query: 326 DAYGRAG 332
D + G
Sbjct: 321 DGCCKEG 327
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y +L +P TY L+ C G L++A + EM G
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ YT +I+ + +S A
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAE 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KPN TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 369 KMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 199 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 258
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTY 262
A+EI++RM P TY +I YG K + A L +EM KP+ TY
Sbjct: 259 VDLAMEIYKRMLSQSLLPDLITYNTLI--YGLCKKGDLKQAHHLIDEMSMKGLKPDKITY 316
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
T L++ +EG + A E +++ I D AY AL+ +A +++ M
Sbjct: 317 TTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLS 376
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +P+ +Y ++++ + + G
Sbjct: 377 VGLKPNXRTYTMIINEFCKKG 397
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 154 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 209
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A +++ M
Sbjct: 210 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRM 269
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 270 LSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 329
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + YTAL++ +EG +AE++ ++ G++P+ Y +
Sbjct: 330 DTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMI 389
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 390 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
++ + + G P S +N + K G+ + A +F + + +PS +Y ++N Y +
Sbjct: 126 YKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 185
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L + M + +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 186 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 245
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K ++ L+ E
Sbjct: 246 FTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLI--YGLCKKGDLKQAHHLIDE 303
Query: 345 LSVK 348
+S+K
Sbjct: 304 MSMK 307
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 187 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 246
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 247 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 306
Query: 326 DAYGRAG 332
D + G
Sbjct: 307 DGCCKEG 313
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L +A + EM G
Sbjct: 235 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKG 294
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + IDG K G+ A E +RM ++ + YT +I+ + + A
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAE 354
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 355 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 185 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 244
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 245 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTT 304
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY A++ +A +++ M +G
Sbjct: 305 LIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVG 364
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 365 LKPDTGTYTMIINEFCKKG 383
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 140 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 195
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 196 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 255
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ +A + M +P TYT +I+ K
Sbjct: 256 LSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 315
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTA+++ +EG +AE++ ++ G++PD Y +
Sbjct: 316 DAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMI 375
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 376 INEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY L+ C +E+A + R + G+ P +NS I GL
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N + A+E+F+ M+ C+P TY ++I+ K AL + +M C ++ TY
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
L++ F + EAEEIF++++ G+ + YN L+ +A +L+ +M M
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +PD+ +YN ++ + R G
Sbjct: 535 GQKPDKFTYNSLLTHFCRGG 554
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 159 LLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+++ +C G +E A +EM + G P +N+ ++GL K G+ + A+EI M +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ P TY +I+ K + A++ ++M + C PN TY L++ +E EE
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 278 AEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVD 326
A E+ L GI PDV +N+L++ A L M GCEPD +YN+++D
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 327 AYGRAG 332
+ G
Sbjct: 444 SLCSKG 449
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 21/196 (10%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T+ L+ C +G ++ A + M + G P YNS I GL K G ++AVE
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M C P+T TY +I+ K ++ A +L + S P++CT+ +L+
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI----- 407
Query: 272 EGLC-----EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCE 315
+GLC A E+FE+++ G EPD + YN L+ EA ++ +M + GC
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 316 PDRASYNIMVDAYGRA 331
+YN ++D + +A
Sbjct: 468 RSVITYNTLIDGFCKA 483
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
H+ A + E+ C P E TY +L+ + C G L++A + ++M G S + YN+
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDG K ++A EIF M+ ++ TY +I+ K+ + A +L ++M
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
KP+ TY +L+ F R G ++A +I + + G EPD+ Y L+
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 12/215 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S C + TY L+ +C + + +AE +F EM +G+ ++V YN+ IDGL K +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++ +M + +P TY ++ + + A + M S+ C+P+I TY L++
Sbjct: 524 ASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCE-- 315
+ G E A ++ +Q GI +AYN ++ EA L M E
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAA 643
Query: 316 PDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
PD SY I+ G + LVEL K +
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+KA C + L A + +M YGL P + + + G ++ G+ A+ I
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFA 270
++M C S + ++++ + K + AL EM + P+ T+ LVN
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
+ G + A EI + + G +PDVY YN+++ EA + +M C P+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366
Query: 320 SYNIMV 325
+YN ++
Sbjct: 367 TYNTLI 372
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
++LIE+Y Q L + ++D + P Y +L L+ E +M
Sbjct: 122 LILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMS 181
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+G+ P +N I L + + A+ + + M P +T+T ++ Y +
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLD 241
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-GIEPDVYAYNAL 300
AL++ +M C + + +V+ F +EG E+A +++ G PD Y +N L
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 301 M----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ A ++ M G +PD +YN ++ + G
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA + + C P TY L+ C +G +E A + R ++ G+ + YN
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPV 616
Query: 196 IDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLM 230
I GL + +A+ +F+ M +++ P +Y ++
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CI TY+ L+K CM + +A +F M+K G P A+ Y + + GL +
Sbjct: 77 LEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQ 136
Query: 202 GGNPQKAVEIFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
GN A+++ Q M D C+P+ +Y+++I+ K + A +LF EM++
Sbjct: 137 TGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGM 196
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
P++ +YT+L++ F G E+A+ +F ++ GI+PDV L +EA
Sbjct: 197 MPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANE 256
Query: 306 LISRM-HMGCEPDRASYNIMV 325
L+ M H GC D +Y+ ++
Sbjct: 257 LLEVMVHRGCILDIVTYSTLI 277
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CIP TY L+K CM+ + +A +F +M+K G P V Y + + GL +
Sbjct: 732 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 791
Query: 202 GGNPQKAVEIFQRMKRDCCQ------PSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
GN + A+E+ ++M D Q P +Y+++I+ K + A +LF EM++
Sbjct: 792 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 851
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PN+ +YT+L++ F R G E+A+ +F ++ G++ + Y+ ++ +
Sbjct: 852 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 900
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CI T L+K CM + KA +F +M+K G P+ V + + GL +
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610
Query: 202 GGNPQKAVEIFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
GN + A+E+ + M D C+P+ +Y+++I+ K + A +LF EM++
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
P++ +YT+L++ F R G ++A+ +F ++ G++PDV ++ L +EA
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730
Query: 306 LISRM-HMGCEPDRASYNIMV 325
L+ M GC P+ +Y +V
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLV 751
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y++++ C G ++A +F+EM+ G+ P + Y S I G + G + A
Sbjct: 635 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 694
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M QP T++++I++ K K A +L M C PN TYT LV
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------------- 315
EA ++F ++Q G PDV Y LM+ + E
Sbjct: 755 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814
Query: 316 ---PDRASYNIMVDAYGRAG 332
PD SY+I++D + G
Sbjct: 815 NFKPDVISYSIIIDGLCKHG 834
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 7/167 (4%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CI TY+ L+K CM + +A +F M+K G P A+ Y + + GL +
Sbjct: 370 LEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQ 429
Query: 202 GGNPQKAVEIFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
GN A+++ Q M D C+P+ +Y+++I+ K + A +LF EM++
Sbjct: 430 TGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGI 489
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
P++ +YT L++ F G E+A+ +F ++ GI+PDV + L++
Sbjct: 490 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 536
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 135 HKKAEFTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREMR----KYGL--P 186
H+ +E T+L + + C P TY L+K C +G + A + +EM +YG+
Sbjct: 103 HRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCK 162
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ + Y+ IDGL K +A E+F+ MK P +YT +I+ + + K A L
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
FNEM +P++ T L++ F +EG EA E+ E + G D+ Y+ L+
Sbjct: 223 FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCM 282
Query: 302 -----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA +L M +GC PD +Y ++ + G
Sbjct: 283 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTG 319
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CI TY+ L+K CM + +A +F M+K G P A+ Y + + GL +
Sbjct: 258 LEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQ 317
Query: 202 GGNPQKAVEIFQRMKRD-------CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
G A+ + Q M D C +P T +++I++ K K A +L M
Sbjct: 318 TGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 377
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------------- 301
C +I TY+ L+ E EA +F +Q G PD Y LM
Sbjct: 378 CILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL 437
Query: 302 ----EAYRLISRMHMGCEPDRASYNIMVDA 327
E R + C+P SY+I++D
Sbjct: 438 QLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 52/261 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + +A + E+ +P +Y L+ +C+SG EKA+ +F EM
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522
Query: 184 GLPPSAVVYNSYIDGLLKGGNP-----------------------------------QKA 208
G+ P + ID L K G KA
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH------KCKPNICTY 262
++F +M++ C P+ T ++ ++ +AL+L M S CKPN +Y
Sbjct: 583 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 642
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRMH 311
+ +++ + G +EA E+F++++ G+ PDV +Y +L+ Y +
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD ++++++D + G
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEG 723
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP +Y L+ +C SG + A+ +F EM G+ P ++ ID L K G +A E
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + M + C P+T TYT ++ + A +LF +M+ C P++ TY L+
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790
Query: 271 REGLCEEAEEIFEQLQ------GAGIEPDVYAYNALM----------EAYRLISRMH-MG 313
+ G + A E+ +++ G +PDV +Y+ ++ EA L M +G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850
Query: 314 CEPDRASYNIMVDAYGRAG 332
P+ SY ++ + R+G
Sbjct: 851 VIPNVISYTSLIHGFCRSG 869
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C PT +Y++++ C ++A +F EM+ G+ P + Y + I G G +KA
Sbjct: 453 KCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 512
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F M QP T +++I++ K K A KL + C ++ T T LV
Sbjct: 513 KCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKG 572
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------RLISRMH----------- 311
+ +A ++F ++Q G P+V LM+ ++ +H
Sbjct: 573 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 632
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+ C+P+ SY+I++D + G
Sbjct: 633 INCKPNAISYSIIIDGLCKCG 653
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T ++L+ C G + +A + M + G V Y++ I GL +A +
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH------KCKPNICTYTAL 265
F M++ C+P TY ++ + +AL+L EM + KCKP + +Y+ +
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGC 314
++ ++ +EA E+F++++ G+ PDV +Y +L+ + L + M +G
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGI 231
Query: 315 EPDRASYNIMVDAYGRAG 332
+PD + +++D + + G
Sbjct: 232 QPDVTTSGVLIDMFCKEG 249
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 135 HKKAEFTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREMR----KYGL--P 186
H+ +E T+L + + C P TY L+K C +G + A + +EM +YG+
Sbjct: 396 HRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCK 455
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ + Y+ IDGL K +A E+F+ MK P +YT +I+ + + K A L
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
FNEM +P++ T + L++ ++G EA ++ E + G DV L+
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575
Query: 302 -----EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+A +L +M +GC P+ + ++ ++G
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 612
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMR----KYG--LPPSAVVYNSYIDGLLKGG 203
C+P TY L+K C +G ++ A + ++M +YG P + Y+ IDGL K G
Sbjct: 775 CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 834
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A E+F+ MK P+ +YT +I+ + ++ K A LFNEM + N TY+
Sbjct: 835 REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYS 894
Query: 264 ALVNAFAREGLCEEAEEIFEQLQG 287
+++ F +EG ++A +F++++
Sbjct: 895 VMIHGFCKEGQIDKA--LFQKMEA 916
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 53/262 (20%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + +A + E+ +P +Y L+ +C SG EKA+ +F EM
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV 229
Query: 184 GLPPSA-----------------------------------VVYNSYIDGLLKGGNPQKA 208
G+ P V Y++ I GL +A
Sbjct: 230 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEA 289
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH------KC-KPNICT 261
++F MK+ C+P Y ++ + K +AL L EM + KC +P++ T
Sbjct: 290 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTT 349
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRM 310
+ L++ +EG EA E+ E + G D+ Y+ L++ + +S
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 409
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
+GC PD +Y ++ + G
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTG 431
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 26/174 (14%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD---------CCQPSTETYTLM 230
MR GL P + +N I+ L + + + R +P T +++
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I++ K K A +L M C +I TY+ L+ E EA +F +Q G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 291 EPDVYAYNALM-----------------EAYRLISRMHMGCEPDRASYNIMVDA 327
PD Y LM E R + C+P SY+I++D
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 174
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + +A + E+ IP +Y L+ +C SG LE A+ +F EM
Sbjct: 825 IIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQ 884
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
G+ +AV Y+ I G K G KA +FQ+M+ +
Sbjct: 885 GVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLD---SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
++++ + + + K+AE + LLD S P + + +++ + +G EKA +F M
Sbjct: 215 IILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALM 274
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G+P S V YNS + N ++ +I+ +M+R QP +Y L+IN YGKA +
Sbjct: 275 TQRGVPKSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVISYALLINAYGKARRE 331
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL +F EM +P Y L++AFA G+ E+A +F+ ++ PD+ +Y +
Sbjct: 332 DEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTM 391
Query: 301 MEAYRLISRM-----------HMGCEPDRASYNIMVDAYGR 330
+ AY S M G EP+ +Y ++ Y +
Sbjct: 392 LSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAK 432
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 20/254 (7%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W + + +R WD S++LI AYG++ AE + +P
Sbjct: 120 WHLVSQILEWVRTQSWWD---FNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVPNVV 176
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ L++AY AEA+FR M+ G PSAV Y + ++G ++A E+F+ +
Sbjct: 177 SHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEVFETL 236
Query: 216 ---KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
++ +P + + +MI ++ KA A ++F M + TY +L+ + E
Sbjct: 237 LDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSLM---SFE 293
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASY 321
+E +I++Q+Q +G++PDV +Y L+ AY R + G P +Y
Sbjct: 294 TNYKEVSKIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRPTHKAY 353
Query: 322 NIMVDAYGRAGLHE 335
NI++DA+ +G+ E
Sbjct: 354 NILLDAFAISGMVE 367
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 66 AQQILRFV-QREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSIL 124
A+QI + QR V +T+ ++SL + ++ + Q++ P V+ L
Sbjct: 267 ARQIFALMTQRGVPKSTV--TYNSLMSFETNYKEVSKIYDQMQ-RSGLQPDVISYA---L 320
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AYG+ +A + E+LD+ PT Y +LL A+ +SG++E+A VF+ MR+
Sbjct: 321 LINAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDR 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y + + + + A F R+K+D +P+ TY +I Y K + +
Sbjct: 381 YTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMM 440
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ + EM+ K N +T +++A+ + A +++++ G+ PD A N L+
Sbjct: 441 EKYEEMQLRGVKANQTIFTTIMDAYGKNKDFGSAVIWYKEMEQYGVPPDQKAKNILL 497
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ S P +YALL+ AY + ++A AVF EM G+ P+ YN
Sbjct: 296 YKEVSKIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRPTHKAYNI 355
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD P +YT M++ Y AS A FN ++
Sbjct: 356 LLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDG 415
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RL 306
+PN+ TY AL+ +A+ ++ E +E++Q G++ + + +M+AY +
Sbjct: 416 LEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAYGKNKDFGSAV 475
Query: 307 ISRMHM---GCEPDRASYNIMV 325
I M G PD+ + NI++
Sbjct: 476 IWYKEMEQYGVPPDQKAKNILL 497
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C ++ AY S AE + L P TY L+K Y + L+K + E
Sbjct: 386 CSYTTMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEE 445
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ G+ + ++ + +D K + AV ++ M++ P + ++++L A +
Sbjct: 446 MQLRGVKANQTIFTTIMDAYGKNKDFGSAVIWYKEMEQYGVPPDQKAKNILLSLAKTADE 505
Query: 240 SFMALKLFNEMRSH 253
K N+M H
Sbjct: 506 Q----KEANQMVGH 515
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 13/204 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA+ + + P TY +L+ +C + ++++A +F+EM + + P V Y+S
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPS-TETYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDGL K G ++ M RD QP+ TY+ +I+ K A+ LFN+M+ +
Sbjct: 381 IDGLCKSGRISYVWDLIDEM-RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
+PNI T+T L++ + G ++A+E+F+ L G +VY YN ++ EA
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499
Query: 305 RLISRMH-MGCEPDRASYNIMVDA 327
++S+M GC P+ ++ ++ A
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIA 523
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + + +A + E+ +P TY+ L+ C SG + + EMR
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + Y+S IDGL K G+ +A+ +F +MK +P+ T+T++++ K + A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F ++ + N+ TY ++N ++GL EEA + +++ G P+ + + ++ A
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
N+ F S PP+ DD ++ ++ + PI+ + + ++++ K H
Sbjct: 24 NSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKI----LDSFA-KMKHYSTA 78
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ L+ + I P T +L+ +C G + +V ++ K G PP V N+ I G
Sbjct: 79 VSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKG 138
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G +KA+ ++ Q + +Y +IN K + A+K ++ KP+
Sbjct: 139 LCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPD 198
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ Y +++A + L EA +F ++ GI DV YN L+ EA L++
Sbjct: 199 VVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 258
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAG 332
M + P+ +YNI+VDA + G
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEG 283
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ K KKA + +LL + +YA L+ C G A R++
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRL 194
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V+YN+ ID + K +A +F M TY +I + K A+
Sbjct: 195 TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI 254
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L NEM PN+ TY LV+A +EG +EA+ + + A ++PDV Y+ LM+ Y
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAY 328
L+ + MG PD +Y I+++ +
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C+ G L++A + EM + P+ YN +D L K G ++A + M
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C +P TY+ +++ Y + A +FN M P++ TYT L+N F + +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGCEP-DRASYNIM 324
+EA +F+++ + P + Y++L++ + LI M +P D +Y+ +
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSL 415
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 416 IDGLCKNG 423
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ A C G +++A++V M K + P + Y++ +DG +KA +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P TYT++IN + K AL LF EM P I TY++L++ +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRAS 320
G ++ ++++ G DV Y++L++ A L ++M P+ +
Sbjct: 387 SGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 321 YNIMVDAYGRAG 332
+ I++D + G
Sbjct: 447 FTILLDGLCKGG 458
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ C +G L++A A+F +M+ + P+ + +DGL KGG + A E+FQ +
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ TY +MIN + K AL + ++M + C PN T+ ++ A ++
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530
Query: 276 EEAEEIFEQLQGAGI 290
++AE++ Q+ G+
Sbjct: 531 DKAEKLLRQMIARGL 545
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D P T+ +LL C G L+ A+ VF+++ G + YN I+G K G +
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+A+ + +M+ + C P+ T+ +I K ++ A KL +M
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 84/150 (56%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ +C G + +A +FREM G PS V YN +DG +K G+ ++A
Sbjct: 310 PNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 369
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M++ P +Y +++ + K +AL+LF EM+ KPN+ YTAL++ A+
Sbjct: 370 KNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK 429
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
EG EEA ++++ + G G+ PD Y+AL+
Sbjct: 430 EGRSEEAFQLYDNMLGDGLTPDDALYSALV 459
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++++ YC SG + A + EM ++G+ +A+ YNS +D + + + E+ + M+
Sbjct: 71 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ +P+ TYT++++ A +F EM+S ++ Y++++NA+ R G
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 190
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVD 326
A E+F++ G GIEP+ + Y AL+ + I +M G ++ +N M+D
Sbjct: 191 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 250
Query: 327 AYGRAGL 333
Y R +
Sbjct: 251 GYCRKNM 257
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY + ++A + E + + P E TY L+ +C G +E AE + +M+ G
Sbjct: 178 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 237
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + +V+N+ IDG + KA+EI M++ + TY + +A++ A
Sbjct: 238 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 297
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M +PN +YT L++ EG EA +F ++ G G EP + YN +M+ Y
Sbjct: 298 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 357
Query: 305 ------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
R R E ++ D Y A L G C V+++++ +
Sbjct: 358 IKKGSIREAERFKNEMEKK----GLVPDIYSYAALVHGHCVNGKVDVALRLF 405
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L++AY +K + AE L+++++ I PT TY +L+ + + K EAVF EM+
Sbjct: 108 LLDAYTREKDDDRVAEM--LKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKS 165
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L Y+S I+ + GN ++A E+F + +P+ TY +IN + K +
Sbjct: 166 KNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEA 225
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L +M+ N + +++ + R+ + ++A EI ++ GIE DVY YN L
Sbjct: 226 AEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLAC 285
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
R +RM G P+ SY ++ + G
Sbjct: 286 GLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEG 326
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L + +++A+ + R M + G+ P+ V Y + I G+ +A +F+ M
Sbjct: 279 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 338
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ +PS TY +M++ Y K A + NEM P+I +Y ALV+ G
Sbjct: 339 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKV 398
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A +FE+++ G +P++ AY AL+ EA++L M G PD A Y+ +
Sbjct: 399 DVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL 458
Query: 325 V 325
V
Sbjct: 459 V 459
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E+ + P+ TY +++ Y G + +AE EM K GL P Y + +
Sbjct: 330 EARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALV 389
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G A+ +F+ MK+ +P+ YT +I+ K +S A +L++ M
Sbjct: 390 HGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLT 449
Query: 257 PNICTYTALVNAF 269
P+ Y+ALV +
Sbjct: 450 PDDALYSALVGSL 462
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 66 AQQILRF-VQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLR--LNKKWDPIVLMSCVS 122
A+ +LR +++ V N + ++ +L H D++ R +P ++ V
Sbjct: 296 AKNLLRIMIEKGVRPNHV--SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNV- 352
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+++ Y +K ++AE E+ +P +YA L+ +C++G ++ A +F EM++
Sbjct: 353 --MMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 410
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G P+ V Y + I GL K G ++A +++ M D P Y+ ++
Sbjct: 411 RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++A + KAEF +++D P TY ++ Y SG +++ +FR+M G
Sbjct: 273 IVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V ++S++ L K G + A EIFQ M P +Y+++++ Y +
Sbjct: 333 LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMN 392
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF+ M N L++A A+ G+ +EA +F ++QG G+ P+V Y+ L+ A+
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ R+ +G EP+ A Y+ ++ + G
Sbjct: 453 CRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG 491
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 13/225 (5%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C++IL I A+ ++ + +A + E+ P TY+ L+ A+C G L A F +
Sbjct: 409 CINIL-ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQ 467
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKAS 238
M G+ P+ VY+S I G G+ KA E I + M + +P+ ++ +I+
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ A +FN + +P I T+ +L++ + G E+A + + + GIEPDV N
Sbjct: 528 RVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNN 587
Query: 299 ALMEAY--------RLI---SRMHMGCEPDRASYNIMVDAYGRAG 332
L+ Y LI +H +P +YNI++D RAG
Sbjct: 588 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ Y + + + D + +L+ A+ G++++A VF EM+
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ V Y++ I + G A+E F +M +P+T Y +I+ + A
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496
Query: 244 LKLFNEMRSHKC-KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ +EM S +PNI +++++++ EG +A+++F + G P + +N+L++
Sbjct: 497 KEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLID 556
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
Y L+ +M +G EPD + N +V Y ++G
Sbjct: 557 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSG 597
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA + E++ +P TY ++ A C + ++KAE V R+M G
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ I G G+ +++ ++F++M P T T++ ++ K +S A
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++F M + P+I +Y+ L++ +A EG + +F + GI + + N L+
Sbjct: 358 EIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA + + M G P+ +Y+ ++ A+ R G
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMG 456
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 12/207 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T+ L+ YC+ G +EKA V M G+ P V N+ + G K G + +
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M +P+T TY ++++ +A ++ A K+F+EM +I TY L+ R
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F +L + D+ N ++ A + R G P+ ++
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725
Query: 321 YNIMVDAYGRAG-LHEGKCSYSLVELS 346
Y +M+ + G + E +S +E S
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKS 752
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC P ++ ++ + G + KA +F EM + G+ P YNS +D L K KA
Sbjct: 227 RCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKA 286
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ ++M +P TY +I+ Y + + K+F +M S P+ T+++ +++
Sbjct: 287 EFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSS 346
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ G ++AEEIF+ + G PD+ +Y+ L+ Y
Sbjct: 347 LCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGY 382
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYT 228
E + + M + P A+ YN+ I L Q+A+++ QRM ++ C P ++
Sbjct: 177 EAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 236
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ + K + A LFNEM P++ TY ++V+A + ++AE + Q+
Sbjct: 237 TVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK 296
Query: 289 GIEPDVYAYNALMEAY 304
G+EPD YNA++ Y
Sbjct: 297 GVEPDGVTYNAIIHGY 312
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
++ ++ + C+ G + A+ VF + G P+ V +NS IDG G +KA + M
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 575
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P T +++ Y K+ K L LF EM K KP TY +++ R G
Sbjct: 576 SVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTS 635
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A+++F ++ +G D+ Y L+ EA L ++ M C+ D N M+
Sbjct: 636 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMI 695
Query: 326 DA 327
+A
Sbjct: 696 NA 697
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K AE + + +P +Y++LL Y G +F M G+ + N
Sbjct: 354 KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINIL 413
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I K G +A+ +F M+ +P+ TY+ +I+ + + + A++ F++M S
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE-PDVYAYNALMEAYRLISR----- 309
+PN Y +L++ F G +A+E ++ G+ P++ +++++ + + R
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533
Query: 310 ------MHMGCEPDRASYNIMVDAYGRAGLHE 335
+H+G P ++N ++D Y G E
Sbjct: 534 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKME 565
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+ Y +KA F L+ + S I P T L+ YC SG ++ +FREM
Sbjct: 554 LIDGYCLVGKMEKA-FGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHK 612
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ V YN +DGLL+ G A ++F M +TY +++ + + A
Sbjct: 613 KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 672
Query: 244 LKLFNEMRSHKCK-----------------------------------PNICTYTALVNA 268
+ LF+++ + CK PN+ TY ++
Sbjct: 673 ITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+EG EEA+ +F ++ +G P N ++
Sbjct: 733 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L+KK P + + + + G+ S KK + E++DS DTY +LLK C +
Sbjct: 610 LHKKVKPTTVTYNIVLDGLLRAGRTSAAKK---MFHEMIDSGTAVDIDTYKILLKGLCRN 666
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
L ++A +F ++ + N+ I+ L K ++A ++F + P+ TY
Sbjct: 667 DLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTY 726
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+MI K A +F+ M C P+ ++ ++G +A ++ G
Sbjct: 727 GVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDG 786
Query: 288 AGIEPDVYAYNALMEAY 304
I + + LM +
Sbjct: 787 TIISLEASTTSLLMSLF 803
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 97 DDLINVSVQL-----RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
+DL + ++ L ++ K+D +L + +I A + ++A + + S +
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNT-----MINALYKVRRREEANDLFAAISTSGLV 720
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++++ G +E+A+ +F M K G PS+ + N I LL+ G+ KA
Sbjct: 721 PNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYY 780
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASK 239
++ T +L+++L+ K
Sbjct: 781 MSKVDGTIISLEASTTSLLMSLFSSKGK 808
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG--LLKGGNPQKAV 209
P T+ +L+ +C +++ + VF M K G+ P V YNS +DG L+K N K+
Sbjct: 263 PDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKS- 321
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
IF M + P +Y ++IN + K K A+ LFNEM PN+ TY +L++
Sbjct: 322 -IFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 380
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDR 318
++ G A ++ +Q+ G+ P++ YN++++A LI++ G +P
Sbjct: 381 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 440
Query: 319 ASYNIMVDA 327
+Y I++D
Sbjct: 441 YTYTILIDG 449
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ + + K+ + + ++ IP TY L+ YC+ + A+++F M +
Sbjct: 270 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG 329
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN I+G K KA+ +F M P+ TY +I+ K+ + A
Sbjct: 330 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 389
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+L ++M PNI TY ++++A + ++A + + + GI+P +Y Y L++
Sbjct: 390 LQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 449
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ G + +YN+M+ + + GL +
Sbjct: 450 LCKVE----GYDITVNTYNVMIHGFCKKGLFD 477
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ C G A + + + + +AV+YN+ I G+ K + A +++ M
Sbjct: 162 SYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM 221
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ TY+ +I+ + K A+ LFN++ KP+ T+ LV+ F ++
Sbjct: 222 VSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKM 281
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
+E + +F + GI PDV YN+LM+ Y L+ ++ G PD SYNI+
Sbjct: 282 KEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNIL 341
Query: 325 VDAY 328
++ +
Sbjct: 342 INGF 345
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E++ P TY+ L+ + + G L+ A +F ++ + P +N +DG K
Sbjct: 218 YSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK 277
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++ +F M + P TY +++ Y + A +FN M P+I +
Sbjct: 278 DRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRS 337
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
Y L+N F + ++A +F ++ I P+V YN+L++ A +L+ +MH
Sbjct: 338 YNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMH 397
Query: 312 -MGCEPDRASYNIMVDA 327
G P+ +YN ++DA
Sbjct: 398 DRGVPPNILTYNSIIDA 414
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 100/218 (45%), Gaps = 16/218 (7%)
Query: 137 KAEFTYLELLDSRCIPTEDT-YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+A L+ +D + + Y ++ C + A ++ EM G+ P+ V Y++
Sbjct: 177 RAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 236
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G G + A+++F ++ + +P T+ ++++ + K K +F M
Sbjct: 237 ISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 296
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----- 310
P++ TY +L++ + A+ IF + G+ PD+ +YN L+ + I ++
Sbjct: 297 IPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 356
Query: 311 ---HMGCE---PDRASYNIMVDAYGRAGLHEGKCSYSL 342
M C+ P+ +YN ++D ++ G+ SY+L
Sbjct: 357 LFNEMHCKNIIPNVVTYNSLIDGLSKS----GRISYAL 390
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + KA + E+ IP TY L+ SG + A + +M
Sbjct: 340 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 399
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----------- 232
G+PP+ + YNS ID L K KA+ + + K QPS TYT++I+
Sbjct: 400 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDIT 459
Query: 233 -------LYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
++G K AL L ++M+ C PN TY + + ++AE++F
Sbjct: 460 VNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFR 519
Query: 284 QLQGAGI 290
++ G+
Sbjct: 520 EMITRGL 526
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS 148
+PP T++ +I+ + K +I LI + + + + + +TY L+D
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDK----------AIALITKFKDQGI-QPSMYTYTILIDG 449
Query: 149 RCIP-----TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
C T +TY +++ +C GL ++A ++ +M+ P+AV Y I LL
Sbjct: 450 LCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNN 509
Query: 204 NPQKAVEIFQRM 215
KA ++F+ M
Sbjct: 510 ENDKAEKLFREM 521
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 148 SRCIPTEDT--YALLLKAYCMSGLLEKAEAVFREMRKYG---LPPSAVVYNSYIDGLLKG 202
S+ +P +T Y +L+K Y G L A VF EMRK + PS V Y++ I GL +G
Sbjct: 184 SKYLPQPNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRG 243
Query: 203 GNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++A E+F+ M ++D P TY L+I + + + A +F MR ++C+PN
Sbjct: 244 AQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFN 303
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y L+N ++G E A +FE++ +G++PD +Y +L+ E L+ M
Sbjct: 304 YATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMW 363
Query: 311 HMGCEPDRASYNIMVDA 327
GC+ D +YN++++
Sbjct: 364 QKGCKADVVTYNLLLEG 380
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R +P + TY LL+ +C G +EKA+++F MRK P+A Y + I+G K G + A
Sbjct: 261 RIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAA 320
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F+ M R QP +YT ++ + + L EM CK ++ TY L+
Sbjct: 321 RGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEG 380
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++ EA + E+L G++ +V +Y +M
Sbjct: 381 LCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVM 413
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 18/252 (7%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI---PTEDTYALLLKAYCMSGLLEKAEA 175
+C+ +LI+ Y +K A + E+ C P+ TY+ L+ C +++A
Sbjct: 192 TCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFE 251
Query: 176 VFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F +M K + P + YN I G + G +KA IF M+++ C+P+ Y +IN +
Sbjct: 252 LFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGH 311
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K + A +F EM +P+ +YT+LV R G +E + +++ G + DV
Sbjct: 312 CKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADV 371
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE---GKCSY 340
YN L+ EA L+ ++ G + + ASY I+++ G E G
Sbjct: 372 VTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGM 431
Query: 341 SLVELSVKHYPA 352
L V HY A
Sbjct: 432 MLGRGFVPHYAA 443
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 13/224 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI + + +KA+ + + + C P YA L+ +C G +E A VF EM +
Sbjct: 271 LLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRS 330
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P AV Y S + L + GN + + + Q M + C+ TY L++ K + A
Sbjct: 331 GVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEA 390
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L ++ S + N+ +Y ++N G E+A + + G G P A N L+
Sbjct: 391 VTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIG 450
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAG---LHEGKCSYSLVE 344
C+ R S + V YG + E +C L+E
Sbjct: 451 L---------CDVGRVS-DATVTLYGLVDTGFMPEARCWARLIE 484
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC---KPNICTYTALVNAFAREGLCEE 277
QP+T Y ++I Y K A ++F+EMR C +P++ TY+ L+ R +E
Sbjct: 189 QPNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKE 248
Query: 278 AEEIFEQL-QGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYNIMV 325
A E+FE + + I PD YN L+ + + ++ CEP+ +Y ++
Sbjct: 249 AFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLI 308
Query: 326 DAYGRAG 332
+ + + G
Sbjct: 309 NGHCKKG 315
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 84/150 (56%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y L+ +C G + +A +FREM G PS V YN +DG +K G+ ++A
Sbjct: 386 PNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 445
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M++ P +Y +++ + K +AL+LF EM+ KPN+ YTAL++ A+
Sbjct: 446 KNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK 505
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
EG EEA ++++ + G G+ PD Y+AL+
Sbjct: 506 EGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++++ YC SG + A + EM ++G+ +A+ YNS +D + + + E+ + M+
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ +P+ TYT++++ A +F EM+S ++ Y++++NA+ R G
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVD 326
A E+F++ G GIEP+ + Y AL+ + I +M G ++ +N M+D
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326
Query: 327 AYGRAGL 333
Y R +
Sbjct: 327 GYCRKNM 333
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY + ++A + E + + P E TY L+ +C G +E AE + +M+ G
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + +V+N+ IDG + KA+EI M++ + TY + +A++ A
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 373
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M +PN +YT L++ EG EA +F ++ G G EP + YN +M+ Y
Sbjct: 374 NLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGY 433
Query: 305 ------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
R R E ++ D Y A L G C V+++++ +
Sbjct: 434 IKKGSIREAERFKNEMEKK----GLVPDIYSYAALVHGHCVNGKVDVALRLF 481
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L++AY +K + AE L+++++ I PT TY +L+ + + K EAVF EM+
Sbjct: 184 LLDAYTREKDDDRVAEM--LKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKS 241
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L Y+S I+ + GN ++A E+F + +P+ TY +IN + K +
Sbjct: 242 KNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEA 301
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A L +M+ N + +++ + R+ + ++A EI ++ GIE DVY YN L
Sbjct: 302 AEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLAC 361
Query: 303 AYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
R +RM G P+ SY ++ + G
Sbjct: 362 GLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEG 402
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+++A+ + R M + G+ P+ V Y + I G+ +A +F+ M + +PS TY +
Sbjct: 369 MDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNV 428
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
M++ Y K A + NEM P+I +Y ALV+ G + A +FE+++ G
Sbjct: 429 MMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRG 488
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
+P++ AY AL+ EA++L M G PD A Y+ +V
Sbjct: 489 SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E+ + P+ TY +++ Y G + +AE EM K GL P Y + +
Sbjct: 406 EARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALV 465
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G A+ +F+ MK+ +P+ YT +I+ K +S A +L++ M
Sbjct: 466 HGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLT 525
Query: 257 PNICTYTALVNAF 269
P+ Y+ALV +
Sbjct: 526 PDDALYSALVGSL 538
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 66 AQQILRF-VQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLR--LNKKWDPIVLMSCVS 122
A+ +LR +++ V N + ++ +L H D++ R +P ++ V
Sbjct: 372 AKNLLRIMIEKGVRPNHV--SYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNV- 428
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+++ Y +K ++AE E+ +P +YA L+ +C++G ++ A +F EM++
Sbjct: 429 --MMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQ 486
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
G P+ V Y + I GL K G ++A +++ M D P Y+ ++
Sbjct: 487 RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 31/278 (11%)
Query: 80 NTIWDAFDSLPPTHATWDDLIN--------------VSVQLRLNKKWDPIVLMSCVSILL 125
+T D+F +PP T + LIN ++ L+L + DP + + L
Sbjct: 68 STQMDSF-GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 126
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+E ++LH + +++D P TY L+ C G A + R M +
Sbjct: 127 VEGKIGEALH-----LFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 181
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P V+Y S ID L K +A +F +M P TYT +++ +
Sbjct: 182 QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTT 241
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
L N+M + K P++ ++ +V+A +EG EA EI + + G+EPDV Y LM+ +
Sbjct: 242 LLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHC 301
Query: 306 LISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
L S M G PD SY +++A + G
Sbjct: 302 LQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG 339
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++S+ +P ++ ++ A C G + +A + M + G+ P V Y + +DG
Sbjct: 245 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 304
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK------------------ 245
+AV++F M R P +YT +IN K ++L+
Sbjct: 305 EMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAV 364
Query: 246 ----------------LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
L NEM + K PN+ ++ +V+A +EG EA ++ + + G
Sbjct: 365 EVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG 424
Query: 290 IEPD 293
+EP+
Sbjct: 425 VEPN 428
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 15/214 (7%)
Query: 129 YGQKSLH----KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+ KSLH A ++ LL P+ +A LL + ++ +M +G
Sbjct: 16 FHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFG 75
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+PP+ N I+ A + ++ + QP T+T +I K AL
Sbjct: 76 VPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 135
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF++M +PN+ TY L+N + G A + ++ +PDV Y +++
Sbjct: 136 HLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 195
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDA 327
EA+ L S+M G PD +Y +V A
Sbjct: 196 CKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHA 229
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + ++A Y E+ R P +++ L+ + G ++ A REMR++
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V+Y I G + G +A+ + M C P TY ++N K + A
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+L NEM+ P++CT+T L++ + R+G E+A + F+ + + PD+ YN L++
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448
Query: 303 ---------AYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
A L MH P+ +Y+I++D++ G
Sbjct: 449 MCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKG 488
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ ++ KA + ++ P TY++L+ ++C G ++ A A EM G
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YNS I G + GN K + +M+ D P TY +I+ Y K K A
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M + +P+ TY +++ F+ G +EA+ +++++ GIEPD Y Y +++ +
Sbjct: 565 NLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGH 624
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 132 KSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+L T + ++ RC+ P T+ +++ A +G +E A A+ M G+ P V
Sbjct: 171 KTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLV 230
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
YNS + GLL+ G KA E+F+ M P ++ ++I + +A + AL+ + EM
Sbjct: 231 TYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM 290
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------L 300
R + P++ +++ L+ F R G + A E +++ G+ PD Y +
Sbjct: 291 RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLM 350
Query: 301 MEAYRLISRM-HMGCEPDRASYNIMVDA 327
+EA R+ M GC PD +YN +++
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLNG 378
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 12/228 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+ ++I + + L +A E++ C+P TY LL C L AE + EM
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
++ G+PP + + I G + GN +KA++ F + +P TY +I+ +
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +L+++M S + PN TY+ L+++ +G + A +++ GI P++ YN++
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG-LHEG 336
++ Y + + +M H PD +YN ++ Y + G +HE
Sbjct: 516 IKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 143 LELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L + R +P + T+ L+ YC G +EKA F + L P V YN+ IDG+ +
Sbjct: 392 LNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCR 451
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ KA E++ M P+ TY+++I+ + + + A +EM + PNI T
Sbjct: 452 QGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMT 511
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-------- 313
Y +++ + R G + ++ +++ + PD+ YN L+ Y +MH
Sbjct: 512 YNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIME 571
Query: 314 ---CEPDRASYNIMVDAYGRAG 332
+PD +YN+++ + G
Sbjct: 572 NENVQPDAVTYNMIISGFSVHG 593
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 11/224 (4%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C LI Y + +KA + + D R P TY L+ C G L KA ++ +
Sbjct: 405 CTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDD 464
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + P+ V Y+ ID + G A M P+ TY +I Y ++
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ +MR K P++ TY L++ + +EG EA + + ++ ++PD YN
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNM 584
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
++ + + M G EPDR +Y M++ + AG
Sbjct: 585 IISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAG 628
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P ++ +L+ +C +G LE+A ++EMR + P V ++ I + G A E
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ P YT++I + +A AL++ +EM + C P++ TY L+N +
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
E +AEE+ +++ G+ PD+ + L+ Y + + PD +
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441
Query: 321 YNIMVDAYGRAG 332
YN ++D R G
Sbjct: 442 YNTLIDGMCRQG 453
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 13/224 (5%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQL----RLNKKWDPI----VLMSCVSI-LLIEAYG 130
+TI D L P T++ LI+ + + N+ WD + + + V+ +LI+++
Sbjct: 428 DTISD--QRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC 485
Query: 131 QKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
+K A F +L E+++ +P TY ++K YC SG + K + +MR + P
Sbjct: 486 EKGQVDNA-FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDL 544
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+ YN+ I G +K G +A + + M+ + QP TY ++I+ + A ++ +
Sbjct: 545 ITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKK 604
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
M + +P+ TY +++N G +++ ++ +++ G+ PD
Sbjct: 605 MGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +++ +YC + + + V EM K + P V +N +D + G+ + A+ + M
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P TY ++ + + A ++F M + P++ ++ L+ F R G
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
EEA +++++G + PDV +++ L+ + M G PD Y ++
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340
Query: 325 VDAYGRAGL 333
+ + RAGL
Sbjct: 341 IGGFCRAGL 349
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL S P + LL++ Y S +A FR + + +P A N+ + L + G
Sbjct: 80 LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGW 139
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
P + ++ + + +T T +M++ Y K + + +EM P++ T+
Sbjct: 140 PHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNV 199
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMH 311
+V+A R G E A + + + GI+P + YN+++ E +R +
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD--A 257
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
G PD S+N+++ + RAG
Sbjct: 258 CGVAPDVRSFNMLIGGFCRAG 278
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 11/228 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + AE + LL+ +P TY+ L+ +C G + K E + +EM +
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +VY+S +DG K G +A+++ ++M + P+ Y +I+ Y KA + +AL
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF EM+S + N + VN R G EEA+E+F+ + G+ PD Y ++M
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377
Query: 302 -------EAYRLISRMHMGCEP-DRASYNIMVDAYGRAGLHEGKCSYS 341
+A+ + M D +YN++++ + G +E + ++
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY + + A + Y E+ +P TY ++ C SG +E+A++VFREM + G
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 185 LPPS-----------------------------------AVVYNSYIDGLLKGGNPQKAV 209
+ P+ VVY + +DGL K G A
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++FQ + + P+ TY+ +I+ + K L EM PN+ Y+++V+ +
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++GL EA ++ ++ I P+V+ Y L++ Y
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ AYC G L A + EM+ YGL P+++ N + L G +K +++
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P+ T+ +++ K+ ++ + L + +++ K ++ TY L++ F R
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G+ A +F+ + G GI D+ YNAL+ Y + S + G P+ +
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613
Query: 321 YNIMVDAYGRAGL 333
YNI++ A L
Sbjct: 614 YNILLGGLSAARL 626
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ YC +G + +A + M+ G P V YN+ ++G K G+ A ++ +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ TYT +I+ Y K+ AL +++EM P++ TYT ++N + G E
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
EA+ +F +++ G+ P+ ++Y L+ EA+ L RM + G D Y ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 326 DAYGRAGL 333
D +AG+
Sbjct: 200 DGLFKAGM 207
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + + ++A + +++ + TY L+ YC+S L+KA AV +M G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN + GL ++A + +MK P+ TY ++++ +GK +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL+ EM + P TY L++ FA+ +A+E+ +++Q GI P+ Y+ L+ +
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726
Query: 305 RLISR 309
+S+
Sbjct: 727 YKLSK 731
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ AYC S LE A ++ EM L P V Y ++GL K G ++A +
Sbjct: 85 PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P+ +Y +I+ K A L M ++ YTAL++ +
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G+ AE++F+ L + P+ Y+AL++ + + ++ G P+
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264
Query: 321 YNIMVDAYGRAGL 333
Y+ +VD Y + GL
Sbjct: 265 YSSIVDGYTKKGL 277
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C G++ +A VF++M G+ + YN+ I G + +KA + +M
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM 602
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ ETY +++ A A L N+M+ PN TY LV+ + G
Sbjct: 603 LTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNM 662
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
+E +++ ++ G P YN L+ +A L+ M + G P+ ++Y+I+
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722
Query: 325 V 325
+
Sbjct: 723 I 723
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C G L A+ + E+ L P+ + Y + ID K + A+ +
Sbjct: 50 PDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYM 109
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P TYT ++N K+ K A +F EM PN +Y L+++ +
Sbjct: 110 YDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK 169
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EG EA + ++ GI DV Y ALM+
Sbjct: 170 EGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T+ +L A S + + ++ G+ YN+ I + G ++A +
Sbjct: 504 PTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLV 563
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M TY +I+ Y +S A + ++M + PN+ TY L+ +
Sbjct: 564 FKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSA 623
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----HMGCE-------PDRAS 320
L +EA + Q++ G+ P+ Y+ L+ + I M + CE P +
Sbjct: 624 ARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRT 683
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
YN+++ + + G + + E+ V+ P
Sbjct: 684 YNVLISCFAK-GKKMSQAKELMQEMQVRGIP 713
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
S E + ++I+ Y + + A++L M++ P+I TY L+N F + G A+++
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 283 EQLQGAGIEPDVYAYNALMEAY 304
++ +EP+V Y L++AY
Sbjct: 76 GEISLVNLEPNVITYTTLIDAY 97
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 12/174 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ L K+A ++ + +P TY +L+ + G +++ ++ EM
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---- 239
G P YN I KG +A E+ Q M+ P++ TY ++I + K SK
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735
Query: 240 --------SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
A +LF EM P T + A+ G +A+ I +L
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 15/237 (6%)
Query: 107 RLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
R +K W P +C +L E + + K Y E+L+ + + +L+ +C
Sbjct: 93 REHKFWVP--FDTCRKVL--EHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCK 148
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
G + A++VF E+ K+GL PS V +N+ ++G ++ G+ + + M QP T
Sbjct: 149 EGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYT 208
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y+++IN K SK A +LF+EM + PN T+T L++ + G + A E ++++
Sbjct: 209 YSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEML 268
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G PD+ YN L+ +A LI M M G +PD+ +Y ++D + G
Sbjct: 269 RQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D T W L P+ +++ L+N ++L L++ + M I
Sbjct: 152 MRLAQSVFDEITKW----GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E++ + +P T+ L+ +C +G ++ A ++EM
Sbjct: 208 TYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A K M + + YTAL++ REG AE++ ++ G++PD Y +
Sbjct: 328 ETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C + A +F EM GL P+ V + + IDG K G+ A+E
Sbjct: 204 PDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEA 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M R P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 264 YKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
EG E A + +++ I D AY AL+ A +++ M +G +PD +
Sbjct: 324 EGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGT 383
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 384 YTMIINEFCKKG 395
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A + +RM ++ + YT +I+ + +S A K+ EM S KP+ T
Sbjct: 324 EGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G + ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCV 416
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ C G LE A + M K + V Y + I GL + G A ++
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKM 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ M +P TYT++IN + K M KL EM+ P + T
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+ AYG+ ++A + E+LD+ PT Y +LL A+ +SG++E+A+ VF+ MR+
Sbjct: 315 LLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRD 374
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P Y + + + + + A + F+R+ +D +P+ TY +I Y K + M
Sbjct: 375 RYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYAKINDLEMV 434
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+K + EM K N T +++A+ + G + A F++++ GI PD A N L+
Sbjct: 435 MKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLL 492
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 20/254 (7%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
W ++ + LR WD +LI AYG+ AE + + +P
Sbjct: 115 WHLVVEILDWLRTQNWWD---FGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYVPNVV 171
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ L++AY G AEA+FR M+K+G PSA Y + ++G ++A E+F +
Sbjct: 172 SQTALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNL 231
Query: 216 KRD---CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
D +P + + +MI +Y KA A K F M + TY +L+ + E
Sbjct: 232 LNDENSPLKPDQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVTYNSLM---SFE 288
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASY 321
+E I++Q+Q A + PDV +Y L+ AY R + G P R +Y
Sbjct: 289 TDYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAY 348
Query: 322 NIMVDAYGRAGLHE 335
NI++DA+ +G+ E
Sbjct: 349 NILLDAFSISGMVE 362
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ + P +YALL+ AY + E+A AVF EM G+ P+ YN
Sbjct: 291 YKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNI 350
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD P +YT M++ Y A A K F +
Sbjct: 351 LLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDD 410
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRM 310
+PN+ TY L+ +A+ E + +E++ GI+ + +M+AY S +
Sbjct: 411 FEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAV 470
Query: 311 HM-------GCEPDRASYNIMV 325
H G PD+ + N+++
Sbjct: 471 HWFKEMESNGIPPDQKAKNVLL 492
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 47/114 (41%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C ++ AY + AE + L+ P TY L+K Y LE + E
Sbjct: 381 CSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEE 440
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
M G+ + + + +D K G+ AV F+ M+ + P + ++++L
Sbjct: 441 MLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSL 494
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 11/228 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + AE + LL+ +P TY+ L+ +C G + K E + +EM +
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ +VY+S +DG K G +A+++ ++M + P+ Y +I+ Y KA + +AL
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
LF EM+S + N + VN R G EEA+E+F+ + G+ PD Y ++M
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377
Query: 302 -------EAYRLISRMHMGCEP-DRASYNIMVDAYGRAGLHEGKCSYS 341
+A+ + M D +YN++++ + G +E + ++
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AY + + A + Y E+ +P TY ++ C SG +E+A++VFREM + G
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 185 LPPS-----------------------------------AVVYNSYIDGLLKGGNPQKAV 209
+ P+ VVY + +DGL K G A
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++FQ + + P+ TY+ +I+ + K L EM PN+ Y+++V+ +
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++GL EA ++ ++ I P+V+ Y L++ Y
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGY 307
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ ++ AYC G L A + EM+ YGL P+++ N + L G +K +++
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P+ T+ +++ K+ ++ + L + +++ K ++ TY L++ F R
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G+ A +F+ + G GI D+ YNAL+ Y + S + G P+ +
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613
Query: 321 YNIMVDAYGRAGL 333
YNI++ A L
Sbjct: 614 YNILLGGLSAARL 626
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ YC +G + +A + M+ G P V YN+ ++G K G+ A ++ +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ TYT +I+ Y K+ AL +++EM P++ TYT ++N + G E
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
EA+ +F +++ G+ P+ ++Y L+ EA+ L RM + G D Y ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 326 DAYGRAGL 333
D +AG+
Sbjct: 200 DGLFKAGM 207
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + + ++A + +++ + TY L+ YC+S L+KA AV +M G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN + GL ++A + +MK P+ TY ++++ +GK +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL+ EM + P TY L++ FA+ +A+E+ +++Q GI P+ Y+ L+ +
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726
Query: 305 RLISR 309
+S+
Sbjct: 727 YKLSK 731
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ AYC S LE A ++ EM L P V Y ++GL K G ++A +
Sbjct: 85 PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P+ +Y +I+ K A L M ++ YTAL++ +
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G+ AE++F+ L + P+ Y+AL++ + + ++ G P+
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264
Query: 321 YNIMVDAYGRAGL 333
Y+ +VD Y + GL
Sbjct: 265 YSSIVDGYTKKGL 277
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C G++ +A VF++M G+ + YN+ I G + +KA + +M
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM 602
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ ETY +++ A A L N+M+ PN TY LV+ + G
Sbjct: 603 LTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNM 662
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
+E +++ ++ G P YN L+ +A L+ M + G P+ ++Y+I+
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722
Query: 325 V 325
+
Sbjct: 723 I 723
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C G L A+ + E+ L P+ + Y + ID K + A+ +
Sbjct: 50 PDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYM 109
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P TYT ++N K+ K A +F EM PN +Y L+++ +
Sbjct: 110 YDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK 169
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EG EA + ++ GI DV Y ALM+
Sbjct: 170 EGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T+ +L A S + + ++ G+ YN+ I + G ++A +
Sbjct: 504 PTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLV 563
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M TY +I+ Y +S A + ++M + PN+ TY L+ +
Sbjct: 564 FKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSA 623
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----HMGCE-------PDRAS 320
L +EA + Q++ G+ P+ Y+ L+ + I M + CE P +
Sbjct: 624 ARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRT 683
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
YN+++ + + G + + E+ V+ P
Sbjct: 684 YNVLISCFAK-GKKMSQAKELMQEMQVRGIP 713
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
S E + ++I+ Y + + A++L M++ P+I TY L+N F + G A+++
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 283 EQLQGAGIEPDVYAYNALMEAY 304
++ +EP+V Y L++AY
Sbjct: 76 GEISLVNLEPNVITYTTLIDAY 97
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 12/174 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ L K+A ++ + +P TY +L+ + G +++ ++ EM
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK---- 239
G P YN I KG +A E+ Q M+ P++ TY ++I + K SK
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735
Query: 240 --------SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
A +LF EM P T + A+ G +A+ I +L
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P TY ++ +C SG +++A EM+ + G P Y+ I+GL K N +KA E
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213
Query: 211 IFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ Q M ++DCC S + +++ Y KA A +L + M H C P++ TY+ +++
Sbjct: 214 LLQEMIGRKDCC-ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDG 272
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPD 317
R G ++ + E++ G +PDV Y L +EA RL+ RM GC P+
Sbjct: 273 LCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPN 332
Query: 318 RASYNIMVDA 327
+Y+++ D
Sbjct: 333 AVTYSLVFDG 342
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY +L++A+C++G L+ A + REM + G+ P+ +YN ++ L K G +A+E+ +
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK C+P T+ +I KA + A ++ +EM N+ TY L+N + G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM--HMGCEPDRASYN 322
EA + +QG PD YNA++ AY + M GC PD +Y+
Sbjct: 140 SGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 323 IMVDA 327
I+++
Sbjct: 197 ILING 201
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P T+ L+ C +G L++A+ V EM + G + V YN+ I+GL G
Sbjct: 82 DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSG 141
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTAL 265
+AV + Q M P T+TY +I+ + K+ + A EM+ C P+ TY+ L
Sbjct: 142 EAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL 198
Query: 266 VNAFAREGLCEEAEEIFEQLQG-AGIEPDVYAYNALMEAY-----------RLISRMHMG 313
+N + +A+E+ +++ G V A+N L++ Y L S + G
Sbjct: 199 INGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG 258
Query: 314 CEPDRASYNIMVDAYGRAG 332
C PD +Y+ ++D R G
Sbjct: 259 CAPDVVTYSTIIDGLCRCG 277
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI + S +KA+ E++ + C + + L+ YC + L++A + M +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+G P V Y++ IDGL + G+ K + ++M C+P TYT+++ KA K
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +L M C PN TY+ + + + + A ++ ++ G DV A+ L+
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLL 376
Query: 303 AY--RLISR 309
+ RL+ R
Sbjct: 377 SVKKRLLDR 385
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 140 FTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYI 196
+ +LE + R C P TY++L+ C S L KA+ + +EM + S V +N+ +
Sbjct: 176 YGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLV 235
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K + +A E+ M C P TY+ +I+ + L +M S CK
Sbjct: 236 DGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCK 295
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
P++ TYT LV + G EA + +++ G P+ Y+ + + I ++ M
Sbjct: 296 PDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMA 352
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y + A C SG + +A V + M+ P V +N+ I GL K G +A ++
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+R + TY +IN A +S A+ + M + P+ TY A+++ F +
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCK 168
Query: 272 EGLCEEAEEIFEQL-QGAGIEPDVYAYNALM----------EAYRLISRM--HMGCEPDR 318
G + A E++ Q AG PD + Y+ L+ +A L+ M C
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 319 ASYNIMVDAYGRA 331
++N +VD Y +A
Sbjct: 229 VAFNTLVDGYCKA 241
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMR-KYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P TY ++ +C SG +++A EM+ + G P Y+ I+GL K N +KA E
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213
Query: 211 IFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ Q M ++DCC S + +++ Y KA A +L + M H C P++ TY+ +++
Sbjct: 214 LLQEMIGRKDCC-ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDG 272
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPD 317
R G ++ + E++ G +PDV Y L +EA RL+ RM GC P+
Sbjct: 273 LCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPN 332
Query: 318 RASYNIMVDA 327
+Y+++ D
Sbjct: 333 AVTYSLVFDG 342
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY +L++A+C++G L+ A + REM + G+ P+ +YN ++ L K G +A+E+ +
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK C+P T+ +I KA + A ++ +EM N+ TY L+N + G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM--HMGCEPDRASYN 322
EA + +QG PD YNA++ AY + M GC PD +Y+
Sbjct: 140 SGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 323 IMVDA 327
I+++
Sbjct: 197 ILING 201
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C P T+ L+ C +G L++A+ V EM + G + V YN+ I+GL G
Sbjct: 82 DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSG 141
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTAL 265
+AV + Q M P T+TY +I+ + K+ + A EM+ C P+ TY+ L
Sbjct: 142 EAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL 198
Query: 266 VNAFAREGLCEEAEEIFEQLQG-AGIEPDVYAYNALMEAY-----------RLISRMHMG 313
+N + +A+E+ +++ G V A+N L++ Y L S + G
Sbjct: 199 INGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG 258
Query: 314 CEPDRASYNIMVDAYGRAG 332
C PD +Y+ ++D R G
Sbjct: 259 CAPDVVTYSTIIDGLCRCG 277
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI + S +KA+ E++ + C + + L+ YC + L++A + M +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
+G P V Y++ IDGL + G+ K + ++M C+P TYT+++ KA K
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A +L M C PN TY+ + + + + A ++ ++ G DV A+ AL+
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLL 376
Query: 303 AY--RLISR 309
+ RL+ R
Sbjct: 377 SVKKRLLDR 385
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 140 FTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYI 196
+ +LE + R C P TY++L+ C S L KA+ + +EM + S V +N+ +
Sbjct: 176 YGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLV 235
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
DG K + +A E+ M C P TY+ +I+ + L +M S CK
Sbjct: 236 DGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCK 295
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
P++ TYT LV + G EA + +++ G P+ Y+ + + I ++ M
Sbjct: 296 PDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMA 352
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y + A C SG + +A V + M+ P V +N+ I GL K G +A ++
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+R + TY +IN A +S A+ + M + P+ TY A+++ F +
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCK 168
Query: 272 EGLCEEAEEIFEQL-QGAGIEPDVYAYNALM----------EAYRLISRM--HMGCEPDR 318
G + A E++ Q AG PD + Y+ L+ +A L+ M C
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 319 ASYNIMVDAYGRA 331
++N +VD Y +A
Sbjct: 229 VAFNTLVDGYCKA 241
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ CM + + + + + G P+ + YNS I+G +K G A ++Q+M
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TYT I+ Y + S MALK+ N++R +P+I Y AL+N F +EG
Sbjct: 568 REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNM 627
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
A ++ L G+ P+ YN+L+ Y+ ++ M G D ++Y +
Sbjct: 628 SHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTL 687
Query: 325 VDAYGRAG 332
+D + + G
Sbjct: 688 IDGFSKDG 695
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 46/247 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + + + A Y ++ + P TY + YC +G + A + ++R+ G
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST-------------------- 224
L P V YN+ I+G + GN A+++ + +D P+T
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVS 666
Query: 225 ---------------ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
TYT +I+ + K AL+L++EM + P+ T+TAL +
Sbjct: 667 KFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
R G + A+++ E+++ + P+V+ YN L+ EA+RL M +MG +PD
Sbjct: 727 CRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDD 786
Query: 319 ASYNIMV 325
+Y+I+V
Sbjct: 787 TTYDILV 793
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IPT TY ++ + +G++ A V+++MR+ GLPP+ + Y S+IDG + G A++
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALK 597
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++R QP Y +IN + + AL+L + PN Y +L+ +
Sbjct: 598 MLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYK 657
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE--PDRASYNIMVDAY 328
+ +E + +E + GI D Y L++ + + E + + + DA+
Sbjct: 658 NLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAF 717
Query: 329 GRAGLHEGKC 338
L G C
Sbjct: 718 TFTALTHGLC 727
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 28/265 (10%)
Query: 85 AFDSLPPTHATWDDLI----NVSVQLRLN-------KKWDPIVLMSCVSILLIEAYGQKS 133
FD+ T+ T D++ + LR+N KK D IV + L+ Y +
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIV-----ATTLMRGYCLRQ 311
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
A + E L +PT+ Y +L++ G+ +KA + R+M GL PS +
Sbjct: 312 EVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELS 371
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ GLL + AV +F+ M D P TY +I+ + +A K AL LF+ M+
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMA-DSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKA 430
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
KP+I TY +L+ + ++G +EA +++ ++ G +P+V Y LM A
Sbjct: 431 GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNA 490
Query: 304 YRLISRMHM-GCEPDRASYNIMVDA 327
Y L+ M G + +YN++++
Sbjct: 491 YALLDEMKQNGVSCNDYTYNVLING 515
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 53/259 (20%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A + E+ DS +P TY L+ +C + L +A +F M+K G+ PS YNS
Sbjct: 384 KDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSL 442
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-MALKLFNEMRSHK 254
+ G K G +AV+++ M + +P+ TY ++ Y A K F A L +EM+ +
Sbjct: 443 LMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGY-IAKKDFDNAYALLDEMKQNG 501
Query: 255 CK-----------------------------------PNICTYTALVNAFAREGLCEEAE 279
P + TY +++N F + G+ A
Sbjct: 502 VSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAF 561
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAY 328
+++Q++ G+ P++ Y + ++ Y L G +PD +YN +++ +
Sbjct: 562 TVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGF 621
Query: 329 GRAGLHEGKCSYSLVELSV 347
EG S++L L +
Sbjct: 622 ----CQEGNMSHALQLLVI 636
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L++ YC+ + A +F+E K G+ P+ V+Y I G + G QKA E+ ++M
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG 362
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
PST +L++ + A+ LF EM + P++ TY L++ + EA
Sbjct: 363 LLPSTFELSLVLKGLLNDRRWKDAVCLFEEM-ADSGLPDVFTYNNLIHWHCQAHKLREAL 421
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAY 328
+F++++ AG++P + YN+L+ EA +L S M M G +P+ +Y ++ Y
Sbjct: 422 NLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGY 481
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 11/213 (5%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L A TY ++ +P + LL + A A+F EMR G A +++
Sbjct: 137 LPSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFD 196
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ + LK G + AV +F M P Y L I K AL++ EM+
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR---- 309
TY +V+ + G EEA + ++++ AG + DV LM Y L
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316
Query: 310 -------MHMGCEPDRASYNIMVDAYGRAGLHE 335
+ G P + Y +++ + G+ +
Sbjct: 317 LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQ 349
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y ++ K+ Y ++ + TY L+ + G + A ++ EM G
Sbjct: 652 LITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKG 711
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P A + + GL + G+ A ++ + M+R +P+ Y ++IN Y + K A
Sbjct: 712 YIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAF 771
Query: 245 KLFNEMRSHKCKPNICTYTALVN 267
+L +EM + +P+ TY LV+
Sbjct: 772 RLHDEMLNMGIQPDDTTYDILVS 794
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVV 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGDLETALEY 333
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G + A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL+ M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A+E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 113/273 (41%), Gaps = 51/273 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL--LLKAYCMSGLLEKAEAVFREMRK 182
LI+ + A + E+L+++ T D Y L+ AY SG L A +R ++
Sbjct: 35 LIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKE 94
Query: 183 Y-----------------------------------GLPPSAVVYNSYIDGLLKGGNPQK 207
+ G P S +N + +K G +
Sbjct: 95 HKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A +F + + +PS ++ ++N Y K +L N M++ +P++ TY+ L+N
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEP 316
+E ++A E+F+++ G+ P+ + L++ + R++ M + P
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSP 274
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLV-ELSVK 348
D +YN ++ YG + K + L+ E+S+K
Sbjct: 275 DLITYNTLI--YGLCKKGDLKQAQDLIDEMSMK 305
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 18/201 (8%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CIP T L+K CM + KA +F +M+K G P+ V + + GL +
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454
Query: 202 GGNPQKAVEIFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
GN + A+E+ + M D C+P+ +Y+++I+ K + A +LF EM++
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
P++ +YT+L++ F R G ++A+ +F ++ G++PDV ++ L +EA
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574
Query: 306 LISRM-HMGCEPDRASYNIMV 325
L+ M GC P+ +Y +V
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLV 595
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CIP TY L+K CM+ + +A +F +M+K G P V Y + + GL +
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635
Query: 202 GGNPQKAVEIFQRMKRDCCQ------PSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
GN + A+E+ ++M D Q P +Y+++I+ K + A +LF EM++
Sbjct: 636 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PN+ +YT+L++ F R G E+A+ +F ++ G++ + Y+ ++ +
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 744
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y++++ C G ++A +F+EM+ G+ P + Y S I G + G + A
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F M QP T++++I++ K K A +L M C PN TYT LV
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------------- 315
EA ++F ++Q G PDV Y LM+ + E
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 658
Query: 316 ---PDRASYNIMVDAYGRAG 332
PD SY+I++D + G
Sbjct: 659 NFKPDVISYSIIIDGLCKHG 678
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
LE++ R CI TY+ L+K CM + +A +F M+K G P A+ Y + + GL +
Sbjct: 33 LEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQ 92
Query: 202 GGNPQKAVEIFQRMKRDC------CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
G A+ + Q M D C+P+ +Y+++I+ K + A +LF EM++
Sbjct: 93 TGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGM 152
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYR 305
P++ +YT+L++ F R G E+A+ +F ++ GI DV + L +EA
Sbjct: 153 MPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANE 212
Query: 306 LISRM-HMGCEPDRASYNIMV 325
L+ M GC D +Y+ ++
Sbjct: 213 LLEVMIQRGCILDIVTYSTLI 233
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 135 HKKAEFT--YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM----RKYGL--P 186
H+ +E T ++ + C P Y L+K C +G + A + +EM +YG+
Sbjct: 59 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P+ V Y+ IDGL K +A E+F+ MK P +YT +I+ + ++ K A L
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----- 301
FNEM + ++ T + L++ +EG EA E+ E + G D+ Y+ L+
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 302 -----EAYRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
EA RL M +GC PD +Y ++ + G
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C PT +Y++++ C ++A +F+EM+ G+ P + Y + I G G +KA
Sbjct: 297 KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 356
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F M QP T +++I++ K K A KL + C P++ T T LV
Sbjct: 357 KCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKG 416
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------RLISRMH----------- 311
+ +A ++F ++Q G P+V LM+ ++ +H
Sbjct: 417 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 476
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+ C+P+ SY+I++D + G
Sbjct: 477 INCKPNAISYSIIIDGLCKCG 497
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C PT +Y++++ C ++A +F+EM+ G+ P + Y S I G + G +KA
Sbjct: 116 KCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKA 175
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+F M + T +++I++ K K A +L M C +I TY+ L+
Sbjct: 176 KCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 235
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------------EAYRLISRMH 311
+ EA +F +Q G PD AY LM E R
Sbjct: 236 LCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295
Query: 312 MGCEPDRASYNIMVDA 327
+ C+P SY+I++D
Sbjct: 296 IKCKPTLISYSIIIDG 311
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 52/261 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + +A + E+ +P +Y L+ +C+SG EKA+ +F EM
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366
Query: 184 GLPPSAVVYNSYIDGLLKGGNP-----------------------------------QKA 208
G+ P + ID L K G KA
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKA 426
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH------KCKPNICTY 262
++F +M++ C P+ T ++ ++ +AL+L M S CKPN +Y
Sbjct: 427 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 486
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRMH 311
+ +++ + G +EA E+F++++ G+ PDV +Y +L+ Y +
Sbjct: 487 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 546
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD ++++++D + G
Sbjct: 547 IGVQPDVTTFSVLIDMLCKEG 567
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP +Y L+ +C SG + A+ +F EM G+ P ++ ID L K G +A E
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + M + C P+T TYT ++ + A +LF +M+ C P++ TY L+
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634
Query: 271 REGLCEEAEEIFEQLQ------GAGIEPDVYAYNALM----------EAYRLISRMH-MG 313
+ G + A E+ +++ G +PDV +Y+ ++ EA L M +G
Sbjct: 635 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694
Query: 314 CEPDRASYNIMVDAYGRAG 332
P+ SY ++ + R+G
Sbjct: 695 VIPNVISYTSLIHGFCRSG 713
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T +L+ +C G + +A + M + G V Y++ I GL +A ++
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH------KCKPNICTYTAL 265
F MK+ C+P Y ++ + K +AL L EM + KCKP + +Y+ +
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ ++ +EA E+F++++ G+ PDV +Y +L+ +
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 166
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 52/261 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + +A + E+ +P +Y L+ +C SG EKA+ +F EM
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI------NLYGKA 237
G+ + ID L K G +A E+ + M + C TY+ +I + +A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245
Query: 238 SKSFM-----------------------------ALKLFNEMRSH------KCKPNICTY 262
++ FM AL+L EM + KCKP + +Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MH 311
+ +++ ++ +EA E+F++++ GI PDV +Y L+ + L + +
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD + ++++D + G
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKG 386
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMR----KYG--LPPSAVVYNSYIDGLLKGG 203
C+P TY L+K C +G ++ A + ++M +YG P + Y+ IDGL K G
Sbjct: 619 CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 678
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A E+F+ MK P+ +YT +I+ + ++ K A LFNEM + N TY+
Sbjct: 679 REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYS 738
Query: 264 ALVNAFAREGLCEEAEEIFEQLQG 287
+++ F +EG ++A +F++++
Sbjct: 739 VMIHGFCKEGQIDKA--LFQKMEA 760
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
QP T ++I+++ K K A +L M C +I TY+ L+ + EA +
Sbjct: 7 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66
Query: 281 IFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------------CEPDRASYNI 323
+F ++ G PD AY LM+ ++++ C+P SY+I
Sbjct: 67 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI 126
Query: 324 MVDA 327
++D
Sbjct: 127 IIDG 130
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP +Y L+ +C SG LE A+ +F EM G+ +AV Y+ I G K G KA
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA-- 753
Query: 211 IFQRMKRD 218
+FQ+M+ +
Sbjct: 754 LFQKMEAN 761
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 18/180 (10%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M G+ P ID K G +A E+ + M + C TY+ +I +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ------GAGIEPD 293
A +LF M+ C+P+ Y L+ + G A + +++ G +P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 294 VYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHE-GKCSYS 341
+ +Y+ ++ EA L M G PD SY ++ + R+G E KC ++
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 14/244 (5%)
Query: 75 REVDSNTIWDAFDSL-----PPTHATWDDLINVSVQLRLNKKWDPIV-LMSCVSIL---- 124
+E D N D F + PP T+ +++ + R K + + M +L
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW 290
Query: 125 ----LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
LI Y K+A + E+ +P T+ +L+ + C G +++A VF M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM 350
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G P YN ++G G ++F M D P T+ ++I Y
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 410
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+ +FNEMR H KPN+ TYT ++ A R G ++A E F Q+ G+ PD YAY+ L
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470
Query: 301 MEAY 304
++ +
Sbjct: 471 IQGF 474
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL--PPSAVVYNSYIDGLLKGGNPQK 207
C+P +Y++LLK+ C G +A+ + R M + G P V YN+ IDG K G+ K
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNK 237
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A ++F+ M + P TY+ +++ KA A +M + PN TY L+
Sbjct: 238 ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIY 297
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEP 316
++ G +EA +F++++ I PDV +N LM EA + M M G P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 317 DRASYNIMVDAYGRAG 332
D SYNIM++ Y G
Sbjct: 358 DVFSYNIMLNGYATKG 373
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A + KAE ++++ +P TY L+ Y +G ++A VF+EMR+
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V +N + L K G ++A ++F M P +Y +M+N Y
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF+ M P ICT+ L+ A+A G+ ++A IF +++ G++P+V Y ++ A
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
I +M G PD+ +Y+ ++ + G
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L+KAY G+L+KA +F EMR +G+ P+ + Y + I L + G A+E
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M P Y +I + A +L +E+ ++ +I +++++N +
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
G +A+ IF+ G+ P Y+ LM+ Y L+ +M G EP+
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 321 YNIMVDAYGRAG-LHEG 336
Y +V+ Y + G + EG
Sbjct: 572 YGTLVNGYCKIGRIDEG 588
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++ + G + KA +F+EM + G+PP V Y+S + L K KA
Sbjct: 215 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAE 274
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++M P+ TY +I Y + A+++F EMR P++ T+ L+ +
Sbjct: 275 AFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSL 334
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----LISRMHM-------GCEPDR 318
+ G +EA ++F+ + G PDV++YN ++ Y L+ + G P
Sbjct: 335 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVI 394
Query: 319 ASYNIMVDAYGRAGL 333
++N+++ AY G+
Sbjct: 395 CTFNVLIKAYANCGM 409
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 27/258 (10%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D I + C +LI+AY + KA + E+ D P TY ++ A C G ++
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A F +M G+ P Y+ I G G+ KA E+ + + ++ +IN
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
K + A +F+ + P Y+ L++ + G E+A +F+ + AGIEP
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 293 DVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAG--------L 333
+ Y L+ Y I R + G +P YNI++D AG
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627
Query: 334 HE--------GKCSYSLV 343
HE KC+YS+V
Sbjct: 628 HEMTESGIAMNKCTYSIV 645
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y++L+ YC+ G +EKA VF M G+ P+ VVY + ++G K G + + +
Sbjct: 532 PTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSL 591
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M + +PST Y ++I+ +A ++ A F+EM N CTY+ ++ +
Sbjct: 592 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK 651
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+EA +F++L+ ++ D+ N ++ EA L + + G P +
Sbjct: 652 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 711
Query: 321 YNIMVDAYGRAGLHE 335
Y+IM+ + GL E
Sbjct: 712 YSIMITNLIKEGLVE 726
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + ++ KA + E++ P TY+ ++ A C + ++KAEA R+M G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN+ I G G ++AV +F+ M+R P T+ +++ K K A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+ M P++ +Y ++N +A +G + ++F+ + G GI P + +N L++AY
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Query: 305 R----------LISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ + M G +P+ +Y ++ A R G
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y +KA + ++ + P + Y L+ YC G +++ ++FREM +
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS ++YN IDGL + G A F M + TY++++ K A
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 658
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ LF E+R+ K +I T ++ + EEA+++F + +G+ P V Y+ ++
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMV 325
EA + S M + GCEPD N +V
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++L Y G L +F M G+ P +N I G KA+ I
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMII 416
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ +P+ TYT +I + K A++ FN+M P+ Y L+ F
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLIS-RMHMGCEPDRAS 320
G +A+E+ ++ G+ D+ ++++ M+A + +++G P
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536
Query: 321 YNIMVDAYGRAGLHE 335
Y++++D Y G E
Sbjct: 537 YSMLMDGYCLVGKME 551
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TYA+L+ + E A A F ++ + GL ++ N + G + +A++I
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168
Query: 212 -FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICTYTALVNA 268
R C P +Y++++ KS A L M C P++ Y +++
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPD 317
F +EG +A ++F+++ GI PD Y++++ A L ++ G P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 318 RASYNIMVDAYGRAG 332
+YN ++ Y G
Sbjct: 289 NWTYNNLIYGYSSTG 303
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
++ ++ C G + A+ +F GL P+AVVY+ +DG G +KA+ +F M
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ Y ++N Y K + L LF EM KP+ Y +++ G
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM 301
A+ F ++ +GI + Y+ ++
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYSIVL 646
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 96 WDDLINVSVQLR-LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE 154
+D+ I + +LR +N K D I L + +I Q ++A+ + + S +P
Sbjct: 655 FDEAIFLFKELRAMNVKIDIITLNT-----MIAGMFQTRRVEEAKDLFASISRSGLVPCV 709
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
TY++++ GL+E+AE +F M+ G P + + N + LLK +A +
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769
Query: 215 MKRDCCQPSTETYTLMINLY 234
+ T L+++L+
Sbjct: 770 IDERNFSLEHLTTMLLVDLF 789
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A LF+EM PN T+T L++ + G +
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 246 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 305
Query: 326 DAYGRAG 332
D + G
Sbjct: 306 DGCCKEG 312
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L++A + EM G
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 293
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 294 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 353
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT +VN F ++G + ++ +++Q G P V YN LM
Sbjct: 354 KMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTY 262
A+EI+++M P TY +I YG K + A L +EM KP+ TY
Sbjct: 244 VDLAMEIYKQMLSQSLLPDLITYNTLI--YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 301
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
T L++ +EG + A E +++ I D AY AL+ +A +++ M
Sbjct: 302 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 361
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD +Y ++V+ + + G
Sbjct: 362 VGLKPDTGTYTMIVNEFCKKG 382
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 139 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 194
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 195 TYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 255 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 314
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 315 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMI 374
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 375 VNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
T TY++L+ + G EKA +F+ M + G P + YN+ + L KGG +A IF
Sbjct: 215 TAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIF 274
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M +P TY++ I+ Y A A ++ ++MR + PN+ TY ++ +
Sbjct: 275 HDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKN 334
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASY 321
EEA ++ +++ G++PD ++YNA+ A RL+ RM C PDR +Y
Sbjct: 335 EHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTY 394
Query: 322 NIMVDAYGRAG 332
N+++ R G
Sbjct: 395 NMVLKLLIRIG 405
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A + +A+ + ++L R P TY++ + +YC + ++ A V +MR+Y
Sbjct: 257 LLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYN 316
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQ------------------------------- 213
L P+ YN I L K + ++A ++
Sbjct: 317 LLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRAL 376
Query: 214 ----RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
RM++D C P TY +++ L + + +++ M K P++ TY+ +++ F
Sbjct: 377 RLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGF 436
Query: 270 ARE-GLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
++ G EEA + FE + GI P V L
Sbjct: 437 CKKKGKLEEACKYFEMMIDEGIPPYVTTVEML 468
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 12/229 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI +G+ +KA + +L+ C Y LL+A C G +++A+ +F +M
Sbjct: 221 ILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSK 280
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P A Y+ +I + Q A + +M+R P+ TY +I K A
Sbjct: 281 RVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEA 340
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L +EM S KP+ +Y A+ A + +++ PD + YN +++
Sbjct: 341 YQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKL 400
Query: 304 YRLISRMHMGCE-----------PDRASYNIMVDAY-GRAGLHEGKCSY 340
I R E P ++Y++M+ + + G E C Y
Sbjct: 401 LIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKY 449
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 148/340 (43%), Gaps = 31/340 (9%)
Query: 23 KNGKLRSFNHKKLSRKRCGSLRGKGWKYGSGFV----------DGIFPVLSPTAQQILRF 72
K + RSF L R + + W +GS +V D V SPT F
Sbjct: 67 KGLRCRSFQRSVLI-DRANEVDHEDWCFGSDYVGERRNSRELLDSKKSVNSPTLSPEAPF 125
Query: 73 VQR-EVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQ 131
VQ E+ +N I S LI+V + +K SC + LI + +
Sbjct: 126 VQNDEMTNNEILQRLCSRGKLTVA-ARLIDV-----MARKSQIPHFPSCTN--LIRGFIR 177
Query: 132 KSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
K L +A T +++ S +P TY +++ C +G L A + +M G P A+
Sbjct: 178 KGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAIT 237
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
YNS I L GN +AV ++ R C P TYT++I L K + AL++ +M
Sbjct: 238 YNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMA 297
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---------- 301
C P+I TY +LVN +++G E+ + L G++P+ YN L+
Sbjct: 298 MEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWD 357
Query: 302 EAYRLISRMH-MGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
E ++ M+ P +YNI+++ ++GL + S+
Sbjct: 358 EVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISF 397
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ ++ ++ L LL P TY L+ + G ++ + + + M +
Sbjct: 311 LVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETS 370
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-- 242
PP+ V YN ++GL K G +A+ + M + C P TY + L G + F+
Sbjct: 371 SPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTL--LSGLCKEGFIDE 428
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
++L N + C P + TY +++ AR G E A+E+++++ GI PD +++L
Sbjct: 429 GIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTW 488
Query: 302 ---------EAYRLISRMHM 312
EA L+ M M
Sbjct: 489 GFCRADQLEEATELLKEMSM 508
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ G E V + +G+ P+AV YN+ I L+ G +
Sbjct: 301 CYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVD 360
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+I + M P+ TY +++N K+ A+ ++ M + C P+I TY L++
Sbjct: 361 DILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGL 420
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
+EG +E ++ L G P + YN +++ + M E + Y+ MVD
Sbjct: 421 CKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSM----ESAKELYDEMVD 473
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +LL C SGLL++A + + M P + YN+ + GL K G + +++
Sbjct: 373 PTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQL 432
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ C P TY ++I+ + A +L++EM P+ T+++L F R
Sbjct: 433 LNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCR 492
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPDRAS 320
EEA E+ +++ AY ++ A +++ M G C PD
Sbjct: 493 ADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERI 552
Query: 321 YNIMVDAYGRAGL 333
Y+ ++ A G+
Sbjct: 553 YSALIKAVADGGM 565
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 83 WDAFDSL---------PPTHATWDDLIN--------------VSVQLRLNKKWDPIVLMS 119
WD D + PPTH T++ L+N S + N D I +
Sbjct: 356 WDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNT 415
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+S L E + + + L LL + C P TY +++ G +E A+ ++
Sbjct: 416 LLSGLCKEGFIDEGIQ------LLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYD 469
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM G+ P + ++S G + ++A E+ + M + Y +I +
Sbjct: 470 EMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQK 529
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
K +A+++ + M +C P+ Y+AL+ A A G+ +EA ++ + L
Sbjct: 530 KVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTL 576
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 17/234 (7%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLE-LLDSRCIPTEDTYALLLKAYCM 166
+ K + P VLM L+I + K+ + + LE +++ C+P T+ +L+ C
Sbjct: 224 IAKGFTPTVLMF---NLVINGFC-KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK 279
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+ + +A+ + +M G P+ V Y++ I+GL K G A E+FQ M+R C P+ T
Sbjct: 280 ANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT 339
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ ++I+ KA + A +L++ MR C P+I TY +L++ + +EA ++F+ +
Sbjct: 340 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 399
Query: 287 GAGIE-PDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMVDAY 328
+G+ + Y+ L Y + RM C PD A+Y ++ Y
Sbjct: 400 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 453
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+E A V + G P+ +++N I+G K + A ++ + M C P+ T+T+
Sbjct: 213 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I KA++ A +L +M C PN+ TY+ ++N ++G ++A E+F+ ++
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDA 327
P+V +N L+ EA +L RM GC PD +YN ++D
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P + TY +L++ + +G L+ A + EM+ G +AVV+ + + GL G +A+
Sbjct: 53 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEAL 112
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E F+ M +D C P TYT +++ KA K A + EM + C P+ T++ L++
Sbjct: 113 EHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGL 171
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-------AYRLISR-----MHMGCEPD 317
+ G E+A + E + G+ A+ +++ + L S+ + G P
Sbjct: 172 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 231
Query: 318 RASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
+N++++ + +A + +Y L+E+ ++
Sbjct: 232 VLMFNLVINGFCKA--KDLDSAYKLLEVMIE 260
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ A C +G ++A+ + REM G P V +++ IDGL K G+ ++A
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAF 181
Query: 210 EIFQR-MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ + ++R T++ L K + +A K+ + + P + + ++N
Sbjct: 182 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 241
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPD 317
F + + A ++ E + G P+V+ + L+ EA +L+ +M M GC P+
Sbjct: 242 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPN 301
Query: 318 RASYNIMVDAYGRAG 332
+Y+ +++ + G
Sbjct: 302 VVTYSTVINGLCKQG 316
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 49/237 (20%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
L+D P TY L+ YC + + + EM G PP ++ + GL +G +
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 493
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM---RSHKCKPN--- 258
++A+++F M C Y L++ +ASK AL + ++ R K P+
Sbjct: 494 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSA 553
Query: 259 --------------------------------ICTYTALVNAFAREGLCEEAEEIFEQLQ 286
+ +Y L++ +R +EA ++FE +
Sbjct: 554 VDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMV 613
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
AG P++ N ++ +AY L+ RM +GC PD + N ++ Y ++G
Sbjct: 614 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 670
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSR---CIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
L++E + S H KA +++D R P+ L+++ C G + A+ + +M
Sbjct: 518 LVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKM 577
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G + YN + GL + +A ++F+ M P T ++I+ A+K
Sbjct: 578 SERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKV 637
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +L M C P+I T L+ + + G + A ++ E++ AG+EP+ ++ L
Sbjct: 638 DDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 37/207 (17%)
Query: 140 FTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ +L++ R C P T+ +L+ C + +E+A ++ MR+ G P + YNS IDG
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381
Query: 199 LLKGGNPQKAVEIFQRMKR-------------------------DCCQ-----------P 222
L K +A ++FQ + D C+ P
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
TYT +I Y K S++ ++L EM S P + T +A++ E A ++F
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 501
Query: 283 EQLQGAGIEPDVYAYNALMEAYRLISR 309
+ + G D YN ++E S+
Sbjct: 502 DSMAARGCTDDALIYNLVVEGMARASK 528
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N +D L + Q+A+ +F+ C P+ TY ++I + A +A++L EM+S
Sbjct: 26 NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
+ N +T L+ G EA E F + PDV Y AL+ E
Sbjct: 86 SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDE 144
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
A ++ M GC PD +++ ++D + G E
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEE 178
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 86/210 (40%), Gaps = 17/210 (8%)
Query: 143 LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSY 195
++L DS C Y L+++ + +KA AV ++ R PS+ ++
Sbjct: 498 IQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDAL 557
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++ L + G A ++ +M + +Y +++ + + A ++F M S
Sbjct: 558 VESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGP 617
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
P I T +++ ++A E+ +++ G PD+ N L+ Y C+
Sbjct: 618 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGY---------CK 668
Query: 316 PDRASY-NIMVDAYGRAGLHEGKCSYSLVE 344
RA +++ AGL ++ L+E
Sbjct: 669 SGRADLARKLLEEMTEAGLEPNDTTHDLLE 698
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+K+ Y ++ S P +YALL+KAY + E+A AVF EM G+ PS YN
Sbjct: 272 YKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNI 331
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+D G ++A +F+ M+RD C P +YT M++ Y AS A F +R
Sbjct: 332 LLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDG 391
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM---- 310
KPN+ TY AL+ A+ E+ EI+E++Q I+ + +M+AY
Sbjct: 392 LKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSAV 451
Query: 311 -------HMGCEPDRASYNIMV 325
H G PD+ + NI++
Sbjct: 452 IWYKEMEHHGVPPDQKAQNILL 473
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 49/291 (16%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WD + + L+ WD ++LI AYG+ AE + + +P
Sbjct: 96 WDLVSEILEWLQSQHWWD---FNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVV 152
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
++ L++AY G AEA+FR M+ G PSA+ Y + ++G ++A E+F+ +
Sbjct: 153 SHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETL 212
Query: 216 ---KRDCCQPSTETYTLMINL------YGKASKSFMAL---------------------- 244
+ +P + + +MI + Y KA K F +
Sbjct: 213 LNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSFETNY 272
Query: 245 ----KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
K++++M+ +P++ +Y L+ A+ R EEA +FE++ AG+ P AYN L
Sbjct: 273 KEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNIL 332
Query: 301 MEAYRLISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEGKCSY 340
++A+ + + C PD SY M+ AY A EG ++
Sbjct: 333 LDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENF 383
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 95/178 (53%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AYG+ ++A + E+LD+ P+ Y +LL A+ +SG++E+A VF+ MR+
Sbjct: 296 LLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRD 355
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P Y + + + + + A F+R+++D +P+ TY +I + K +
Sbjct: 356 RCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKM 415
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++++ EM+ + K N T +++A+ + A +++++ G+ PD A N L+
Sbjct: 416 MEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEMEHHGVPPDQKAQNILL 473
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 17/221 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTE---DTYALLLKAYCMSGLLEKAEAVFREM 180
++++ + + + K+AE + LL+ P E + +++ +G EKA VF M
Sbjct: 191 IILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALM 250
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G+P S V YNS + N ++ +I+ +M+R +P +Y L+I YG+A +
Sbjct: 251 AERGVPQSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARRE 307
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL +F EM +P+ Y L++AFA G+ E+A +F+ ++ PD+ +Y +
Sbjct: 308 EEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTM 367
Query: 301 MEAYRLISRM-----------HMGCEPDRASYNIMVDAYGR 330
+ AY S M G +P+ +Y ++ + +
Sbjct: 368 LSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAK 408
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ + C G + A V + M+K G+ P V YNS I L G + I
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R P T++ +I++YGK + A K +NEM PNI TY +L+N
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
GL +EA+++ L G P+ YN L+ Y R+ M + G + D +
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 321 YNIMVDAYGRAG 332
YN + Y +AG
Sbjct: 362 YNTLYQGYCQAG 373
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ YG++ +A+ Y E++ P TY L+ C+ GLL++A+ V + G
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+AV YN+ I+G K ++I M RD T TY + Y +A K A
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
K+ M S P++ T+ L++ G +A E LQ + + YN +++
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL 439
Query: 304 ----------YRLISRMHMGCEPDRASYNIMVDAYGRAGL 333
Y S G PD +Y M+ R L
Sbjct: 440 CKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRL 479
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ +S +P+ ++ LL A E ++FR + G+ + + ID +
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+ +M + +PS T+ ++N + ++ + A+ L +++ +PN+
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLIS-RM 310
Y ++++ +G A ++ + ++ GI PDV YN+L+ + R++S M
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 311 HMGCEPDRASYNIMVDAYGRAG-LHEGKCSYS-LVELSV 347
MG PD +++ ++D YG+ G L E K Y+ +++ SV
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ L+ Y G L +A+ + EM + + P+ V YNS I+GL G +A ++
Sbjct: 252 PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ P+ TY +IN Y KA + +K+ M + TY L + +
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
G AE++ ++ G+ PD+Y +N L++
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 140 FTYLELLDSRCIPTEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
F +LE+L + D Y+ L+ +C L A + +M K G PS V + S ++
Sbjct: 102 FRHLEMLG----ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN 157
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G +A+ + ++ +P+ Y +I+ + + AL + M+ +P
Sbjct: 158 GFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP 217
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ TY +L+ G + I + GI PDV ++AL++ Y
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
L + +SR Y L++ S A +F +M + PS V ++ + + K
Sbjct: 33 LRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKL 92
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+ + +F+ ++ ++T +I+ + + ++ +AL +M +P+I T+
Sbjct: 93 NKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTF 152
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-H 311
+LVN F EA + +Q+ G G EP+V YN +++ A ++ M
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
MG PD +YN ++ +G
Sbjct: 213 MGIRPDVVTYNSLITRLFHSG 233
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L + YC +G AE V M G+ P +N +DGL G KA+ + +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ TY ++I KA K A LF + P++ TY ++ R+ L
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 276 EEAEEIFEQLQ 286
EA E++ ++Q
Sbjct: 481 REAHELYRKMQ 491
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ + C +G + A ++F +M YG+ P V+Y S ++GL G + A +
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + +P T+ +I+ + K K A +L+NEM PNI TYT+L+N F
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG +EA ++F ++ G PDV AY +L+ +A ++ M G + +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 321 YNIMVDAYGRAG 332
Y ++ +G+ G
Sbjct: 355 YTTLIQGFGQVG 366
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 35/292 (11%)
Query: 67 QQILRFVQREVDSNTIWDAF----DSLP-PTHATWDDLINVSVQLRLNKKWDPIV----- 116
++ILR + N D F +S P P+ + L+NV ++ KK+D ++
Sbjct: 41 REILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKM---KKFDVVINLCDH 97
Query: 117 ---------LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L +C LL+ + Q S A +++ P T+ L+ +C+
Sbjct: 98 LQIMGVSHDLYTCN--LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
+E+A ++ +M + G+ P V+Y + ID L K G+ A+ +F +M+ +P Y
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T ++N + + A L M K KP++ T+ AL++AF +EG +AEE++ ++
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 288 AGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAY 328
I P+++ Y +L+ EA ++ M GC PD +Y +++ +
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ AE Y E++ P TY L+ +CM G +++A +F M G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S I+G K A++IF M + +T TYT +I +G+ K +A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA---GIEPDVYAYNALM 301
++F+ M S PNI TY L++ G ++A IFE +Q G+ P+++ YN L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 302 EA 303
Sbjct: 433 HG 434
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ A+ G AE ++ EM + + P+ Y S I+G G +A ++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ C P YT +IN + K K A+K+F EM N TYT L+ F +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
G A+E+F + G+ P++ YN L+
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C SG A+++ R M K + P + +N+ ID +K G A E+
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M R P+ TYT +IN + A ++F M + C P++ YT+L+N F +
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR--------MHM---GCEPDRAS 320
++A +IF ++ G+ + Y L++ + + + HM G P+ +
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389
Query: 321 YNIMV 325
YN+++
Sbjct: 390 YNVLL 394
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY- 183
LI+ +GQ A+ + ++ P TY +LL C +G ++KA +F +M+K
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 184 --GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P+ YN + GL G +KA+ +F+ M++ TYT++I KA K
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
A+ LF + S KPN+ TYT +++ REGL EA +F +++ G+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 24/272 (8%)
Query: 89 LPPTHATWDDLINVSVQ----LRLNKKWDPIVLMSCVSIL-----LIEAYGQKSLHKKAE 139
+ P T++ LI+ V+ L + ++ ++ MS + LI + + +A
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
+ + C P Y L+ +C ++ A +F EM + GL + + Y + I G
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK---CK 256
+ G P A E+F M P+ TY ++++ K AL +F +M+ +
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE----PDVYAYNALMEAYRLISRMHM 312
PNI TY L++ G E+A +FE ++ ++ + +A ++ + +++
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 313 GC-------EPDRASYNIMVDAYGRAGL-HEG 336
C +P+ +Y M+ R GL HE
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 43/261 (16%)
Query: 88 SLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLD 147
++PP+ +T+++LIN A G ++A ++ +
Sbjct: 200 AIPPSRSTYNNLIN--------------------------ACGSSGNWREALKLCKKMTE 233
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ P T+ ++L AY KA + F M+ + P N I L K G +K
Sbjct: 234 NGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEK 293
Query: 208 AVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A+ IF+ M KR C P T+T +I+LY + +F+ M + KPNI +Y L
Sbjct: 294 AIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTL 353
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EAYRLISRMHM 312
+ A+A G+ +EA +F ++ +G+ PDV +Y +L+ E + ++ R +
Sbjct: 354 MGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKL 413
Query: 313 GCEPDRASYNIMVDAYGRAGL 333
+P+ SYN M+DAYG GL
Sbjct: 414 --KPNIVSYNAMIDAYGSNGL 432
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
+ C P T+ ++ Y ++G +E AVF M GL P+ V YN+ + G ++
Sbjct: 306 AECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKE 365
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+ +F +K +P +YT ++N YG++ + A ++F M+ K KPNI +Y A+++
Sbjct: 366 ALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMID 425
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
A+ GL EA E+ +++ GI P+ + L+ A
Sbjct: 426 AYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAA 461
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 106/225 (47%), Gaps = 13/225 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +A + E+ RC P +T L+ A+ SG A + +M +
Sbjct: 140 MMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQK 199
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+PPS YN+ I+ GN ++A+++ ++M + P T+ ++++ Y ++ A
Sbjct: 200 AIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKA 259
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE--PDVYAYNALM 301
L F M+ +P+ T ++ + G E+A IF+ ++ E PDV + +++
Sbjct: 260 LSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSII 319
Query: 302 EAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLHE 335
Y + ++ G +P+ SYN ++ AY G+++
Sbjct: 320 HLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNK 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 38/253 (15%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY ++K+A + + +S P +Y LL +Y S +KA VF M++
Sbjct: 353 LMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDK 412
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK----- 239
L P+ V YN+ ID G +AVE+ + M++D P+ + ++ G+ S+
Sbjct: 413 LKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNID 472
Query: 240 -----------------------SFM-------ALKLFNEMRSHKCKPNICTYTALVNAF 269
S+M A ++ MR K P+ T+T L++
Sbjct: 473 VVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGC 532
Query: 270 AREGLCEEAEEIFEQLQGAGI--EPDVYAYNALMEAYRLISRMHM-GCEPDRASYNIMVD 326
+ EA E ++ I + Y+ + EA + ++M M GC PD +Y +M+
Sbjct: 533 CKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESMFNKMKMAGCSPDVVTYTMMLH 592
Query: 327 AYGRAGLHEGKCS 339
AY A + C+
Sbjct: 593 AYNAAEHWKKACA 605
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 16/227 (7%)
Query: 124 LLIEAYGQKSL--HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
LLI+ QK H F +++ + C T D Y ++++ + ++A +F EM+
Sbjct: 104 LLIKEITQKGSIEHSILVFRWMKNQRNYCART-DIYNMMIRLHARHNWTDQARGLFFEMQ 162
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+ P A N+ I+ + G + A+ I + M + PS TY +IN G +
Sbjct: 163 KWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWR 222
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL- 300
ALKL +M + P++ T+ +++A+ +A FE ++G I PD N +
Sbjct: 223 EALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIII 282
Query: 301 ------------MEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ ++ + C PD ++ ++ Y G E
Sbjct: 283 YCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIE 329
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 62/242 (25%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +YG+ KKA + + + P +Y ++ AY +GLL +A V REM + G
Sbjct: 388 LLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDG 447
Query: 185 LPPSAV-----------------------------------VYNSYIDGLLKGGNPQKAV 209
+ P+AV YNS I + G +KA
Sbjct: 448 IYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKAT 507
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK------------------------ 245
+++ M++ P T+T++I+ K +K AL+
Sbjct: 508 SMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITE 567
Query: 246 ---LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+FN+M+ C P++ TYT +++A+ ++A + ++++ I+PD A +ALM
Sbjct: 568 AESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMR 627
Query: 303 AY 304
A+
Sbjct: 628 AF 629
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 196 IDGLLKGGNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I + + G+ + ++ +F+ MK R+ C T+ Y +MI L+ + + + A LF EM+
Sbjct: 106 IKEITQKGSIEHSILVFRWMKNQRNYC-ARTDIYNMMIRLHARHNWTDQARGLFFEMQKW 164
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
+CKP+ T AL+NA R G A I E + I P YN L+ EA
Sbjct: 165 RCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREA 224
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+L +M G PD ++NI++ AY + SY
Sbjct: 225 LKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSY 262
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 19/219 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+AYG L +A E+ P + LL A + V + +
Sbjct: 423 MIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRH 482
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + + YNS I + G +KA +++ M++ P T+T++I+ K +K AL
Sbjct: 483 IKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEAL 542
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +EM K Y++ G EAE +F +++ AG PDV Y ++ AY
Sbjct: 543 EFLSEMMDLKIPMTKEAYSS--------GKITEAESMFNKMKMAGCSPDVVTYTMMLHAY 594
Query: 305 RLISRMHMGC-----------EPDRASYNIMVDAYGRAG 332
C +PD + + ++ A+ + G
Sbjct: 595 NAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGG 633
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 127 EAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP 186
EAY + +AE + ++ + C P TY ++L AY + +KA A+ +EM +Y +
Sbjct: 558 EAYSSGKI-TEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQ 616
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P + ++ + KGG+P K + + + M+ S + M++ ++L
Sbjct: 617 PDTIACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDWRTTIEL 676
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
M S +I L++ + G E ++F ++ G+G E + Y+ L++
Sbjct: 677 IKLMESSFSVVSIGLLNQLLHLLGKSGKIESMMKLFYKIIGSGAEINCNTYSILLK 732
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WD + V +R + P + + I LI G+ +KA + ++D C P
Sbjct: 121 WDSALKVFELMRDQVWYKPHI---GIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQ 177
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+Y L+ Y SG +A + M+ G P Y+ I L + +K +
Sbjct: 178 SYTALVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLAD 237
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R P+T TY +I+ YGKA + +M S CKP++ T + + AF G
Sbjct: 238 MARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQ 297
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHMGCEPDR--------ASYNI 323
E E +E+ Q +GI P++ YN L+++Y ++ +M E + +YN+
Sbjct: 298 IETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNV 357
Query: 324 MVDAYGRAG 332
++DA+GRAG
Sbjct: 358 VIDAFGRAG 366
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+AYG+ + E T L++L C P T L+A+ SG +E E+ + + + G
Sbjct: 253 LIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQASG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN +D K +K + + M++ + TY ++I+ +G+A
Sbjct: 313 IVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQME 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M+S + KPN T ++V A+ R G ++ + ++ + I D+ +N L++AY
Sbjct: 373 YIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIENSDITLDIVFFNCLVDAY 432
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ + C+PD+ + M+ + G+ + + Y
Sbjct: 433 GRVGCLAEMWDILDLMKEHRCKPDKVTCTTMIKWFLIKGIDDHRVQY 479
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 50/231 (21%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY++L+K+ + EK +++ +M + G+PP+ V YN+ ID K G +
Sbjct: 208 CQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEME 267
Query: 210 EIFQRMKRDCCQPST-----------------------------------ETYTLMINLY 234
+M C+P +TY ++++ Y
Sbjct: 268 STLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSY 327
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GKA + M+ + I TY +++AF R G E+ E IF ++ I+P+
Sbjct: 328 GKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNC 387
Query: 295 YAYNALMEAY-------------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+++ AY R+I + D +N +VDAYGR G
Sbjct: 388 VTLCSVVRAYGRAGEVKKIKTALRIIENSDITL--DIVFFNCLVDAYGRVG 436
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ A+G + E Y + S +P TY +LL +Y + + EK AV M+KY
Sbjct: 289 LRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYY 348
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS---KSFM 242
+ V YN ID + G+ ++ IF+ MK + +P+ T ++ YG+A K
Sbjct: 349 SWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKT 408
Query: 243 ALKLFNE--------------------------------MRSHKCKPNICTYTALVNAFA 270
AL++ M+ H+CKP+ T T ++ F
Sbjct: 409 ALRIIENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCTTMIKWFL 468
Query: 271 REGLCEEAEEIFEQLQGAGIEPDV 294
+G+ + + L+ + D
Sbjct: 469 IKGIDDHRVQYLRDLKDGRAKDDT 492
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+A+G+ ++ E+ + + R P T +++AY +G ++K + R +
Sbjct: 357 VVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIENS 416
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ V +N +D + G + +I MK C+P T T MI +
Sbjct: 417 DITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCTTMIKWF 467
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L + T+ +LL Y +GL +AE VF RK GL + YN+ I KGG
Sbjct: 220 EMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGLA-DIISYNTIIAAYAKGG 278
Query: 204 NPQKAVEIFQRMKRDCCQP-STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
N ++ F +M +D P S E Y M++ YGKA + + +M+ KCK + TY
Sbjct: 279 NFL-SMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTY 337
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM 312
++N + R G ++ + +L+ G+EPD+Y+YN L++AY +L+ M +
Sbjct: 338 NIMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRV 397
Query: 313 -GCEPDRASYNIMVDAYGR 330
G PDR +Y ++ A R
Sbjct: 398 KGISPDRVTYANLIAALQR 416
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+S +I+ + AE LEL S + Y+++++ Y + L+ A +V EM
Sbjct: 91 ISCTMIDVFSTMERFADAETILLELKASASVLDMIAYSVIVRMYIKARRLKDACSVLAEM 150
Query: 181 RKYG-LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
K + P ++ + K G +K + + +++ + Y +IN G+A
Sbjct: 151 EKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEAMYNCIINCCGRAIP 210
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
++F+EM N T+ L++ + + GL AE++F + G+ D+ +YN
Sbjct: 211 VDELSRIFDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGL-ADIISYNT 269
Query: 300 LMEAYR----------LISRMH-MGCEPDRASYNIMVDAYGRAGLHE 335
++ AY + M G +YN M+DAYG+AG E
Sbjct: 270 IIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLE 316
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I YG++ + EL D P +Y L+KAY ++ + E A + +EMR
Sbjct: 339 IMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVK 398
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
G+ P V Y + I L + N +AV+ MK+
Sbjct: 399 GISPDRVTYANLIAALQRNENFLEAVKWSLWMKQ 432
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++AYG+ ++ ++ ++C TY +++ Y G ++ V E++ G
Sbjct: 305 MLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRG 364
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+ P YN+ I P+ AV++ Q M+ P TY +I
Sbjct: 365 VEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVKGISPDRVTYANLI 411
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 116 VLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR--CIPTEDTYALLLKAYCMSGLLEKA 173
+++ C+S L GQ S +A + + D R C P T+ ++ Y + G +E
Sbjct: 288 IIIYCLSKL-----GQSS---QALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENC 339
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
AVF M GL P+ V YN+ + G + A+ +F +KR+ P +YT ++N
Sbjct: 340 RAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNS 399
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
YG++ + A ++F MR + KPN+ TY AL++A+ G EA EIF Q++ G +P+
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPN 459
Query: 294 VYAYNALMEA 303
V + L+ A
Sbjct: 460 VVSVCTLLAA 469
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +A + E+ C P +TY L+ A+ +G A + +M +
Sbjct: 148 MMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRA 207
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEI-------------------------------- 211
+ PS YN+ I+ GN ++A+E+
Sbjct: 208 AIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 267
Query: 212 ---FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICTYTALV 266
F+ MK +P T T+ ++I K +S AL +FN MR + C+P++ T+T+++
Sbjct: 268 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIM 327
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL-------------ISRMHMG 313
+ ++ G E +FE + G++P++ +YNALM AY + I R G
Sbjct: 328 HLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKR--NG 385
Query: 314 CEPDRASYNIMVDAYGRA 331
PD SY ++++YGR+
Sbjct: 386 IVPDVVSYTSLLNSYGRS 403
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G ++A ++ D+ P T+ ++L AY KA + F M+
Sbjct: 219 LINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFM 242
+ P +N I L K G +A+++F M KR C+P T+T +++LY +
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIEN 338
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+F M + KPNI +Y AL+ A+A G+ E A +F ++ GI PDV +Y +L+
Sbjct: 339 CRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLN 398
Query: 303 AYR------------LISRMHMGCEPDRASYNIMVDAYGRAGL 333
+Y L+ R +P+ +YN ++DAYG G
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGF 440
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 46/254 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +YG+ KA+ +L + R P TY L+ AY +G L +A +FR+M + G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 185 LPPSAV-----------------------------------VYNSYIDGLLKGGNPQKAV 209
P+ V YNS I + +KA+
Sbjct: 456 TKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++Q M++ + + T+T++I+ + SK A+ EM Y++++ A+
Sbjct: 516 ALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDR 318
+++G EAE IF Q++ AG +PDV AY +++ AY + C EPD
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 319 ASYNIMVDAYGRAG 332
+ + ++ A+ + G
Sbjct: 636 IACSALMRAFNKGG 649
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++++ + +++A +F EM+K+ P A Y++ I+ + G + A+ +
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R PS TY +IN G + AL++ +M + P++ T+ +++A+
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNAL-------------MEAYRLISRMHMGCEPDRASY 321
+A FE ++GA + PD +N + ++ + + C PD ++
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTF 323
Query: 322 NIMVDAYGRAG 332
++ Y G
Sbjct: 324 TSIMHLYSVRG 334
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 196 IDGLLKGGNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I L + G + V +F+ MK ++ C + Y +MI L+ + + A LF EM+
Sbjct: 114 IRELSRRGCIELCVNVFKWMKSQKNYC-ARNDIYNMMIRLHARHNWVDQARGLFFEMQKW 172
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
CKP+ TY AL+NA R G A + + + A I P YN L+ +A
Sbjct: 173 SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQA 232
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ +M G PD ++NI++ AY + SY
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSY 270
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
AY ++ +AE + ++ + C P Y +L AY S KA +F EM G+ P
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 633
Query: 188 SAVVYNSYIDGLLKGGNP-----------------------------------QKAVEIF 212
++ ++ + KGG P ++A+++
Sbjct: 634 DSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEWKRAIDLI 693
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
Q M S M+ L+GK+ K +KLF ++ + + N TY L+
Sbjct: 694 QMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKLFYKIIASGVEINFKTYAILLEHLLAV 753
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + E+ E + AGI+P Y ++
Sbjct: 754 GNWRKYIEVLEWMSDAGIQPSNQMYRDII 782
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 140 FTYLELLDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+YL+ ++ IP T++ Y+ +L AY G + +AE++F +M+ G P + Y S +
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHA 609
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
KA E+F M+ + +P + + ++ + K + L + MR
Sbjct: 610 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF E+ K+GL PS V +N+ ++G ++ G+ + + M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSID 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A E ++++ G PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGSCKEG 325
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 MRLAQSVFDEITKW----GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E++ + +P T+ L+ +C +G ++ A ++EM
Sbjct: 208 TYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
AL M + + YTAL++ REG +AE++ ++ G++PD Y +
Sbjct: 328 ETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C + A +F EM GL P+ V + + IDG K G+ A+E
Sbjct: 204 PDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMET 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M R P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 264 YKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E A +++ I D AY AL+ +A +++ M +G +PD +
Sbjct: 324 EGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGT 383
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 384 YTMIINEFCKKG 395
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
TY E+L P TY L+ C G L++A+ + EM GL P + Y + IDG
Sbjct: 263 TYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G+ + A+ +RM ++ + YT +I+ + +S A K+ EM S KP+
Sbjct: 323 KEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNG 382
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
TYT ++N F ++G + ++ +++Q G P V
Sbjct: 383 TYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCV 416
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 15/169 (8%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
++E+ + G P S +N + K G + A +F + + +PS ++ ++N Y +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L + M + +P++ TY+ L+N +E +A E+F ++ G G+ P+
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVT 243
Query: 297 YNAL-------------MEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ L ME Y+ + R G PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKTGSIDLAMETYKEMLR--QGFSPDLITYNTLIYGLCKKG 290
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ C G LE A + M K + V Y + I GL + G A ++
Sbjct: 309 PDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKM 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ M +P TYT++IN + K KL EM+ P + T
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|12324348|gb|AAG52140.1|AC022355_1 hypothetical protein; 19198-19943 [Arabidopsis thaliana]
Length = 233
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 39/236 (16%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
EL+ S+ C P TY L+K +C + +++ +FREM + GL + V Y + I GL +
Sbjct: 2 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 61
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC------ 255
G+ A EIF+ M D P TY ++++ K K AL +F M+ C
Sbjct: 62 AGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVVFGYMQKRMCKAGKVE 121
Query: 256 --------------KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
KPN+ TYT +++ F ++G EEA +F +++ G PD YN L+
Sbjct: 122 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 181
Query: 302 EAY----------RLISRMHMGCE--PDRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
A+ LI M C D ++Y ++ D LH+G+ +E+
Sbjct: 182 RAHLRDGDKAASAELIKEMR-SCRFAGDASTYGLVTDM-----LHDGRLDKGFLEM 231
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F+ M C P+ TY +I + KA + ++LF EM N TYT L+
Sbjct: 1 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 60
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ G C+ A+EIF+++ G+ PD+ YN L++
Sbjct: 61 QAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 93
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY- 183
LI+ Q A+ + E++ P TY +LL C +G LEKA VF M+K
Sbjct: 55 LIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVVFGYMQKRM 114
Query: 184 -------------------GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
G+ P+ V Y + I G K G ++A +F++MK D P +
Sbjct: 115 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDS 174
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
TY +I + + + +L EMRS + + TY LV +G
Sbjct: 175 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDG 222
>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 376
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C +G ++K+ V + G A Y++ I+GL K N +AV + M
Sbjct: 96 TYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGM 155
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C+P+ Y +IN ASK A+++F EM + C P I TY L+N F + +
Sbjct: 156 IKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMF 215
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIM 324
EA + ++L G++P V Y+ LME A +L +++ G +PD +NI+
Sbjct: 216 GEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNIL 275
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKHY 350
+ G CS +EL++ Y
Sbjct: 276 I---------HGLCSVGKMELALSLY 292
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 89/179 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI S + A + E+ C PT TY L+ +C + + +A + +E+ G
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKG 229
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y+ ++GL ++A++++ ++ +P + + ++I+ K +AL
Sbjct: 230 LDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELAL 289
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ +M KC PN+ ++ L+ F ++G A I+ ++ G+EPD+ +YN +E
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEG 348
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F E++ S + ++ ++++ +G +++ +++ M++ G ++ Y + G
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G K++ + + ++ Y+ MIN K + A+ + N M CKPN+
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 164
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
Y L+N E+A +F ++ P + YN L+ EAY L+
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKE 224
Query: 310 -MHMGCEPDRASYNIMVDA 327
+ G +P +Y+++++
Sbjct: 225 LLDKGLDPGVITYSMLMEG 243
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C SG ++ AE V++E+ + + P AVVYN+ ++G + + E+++ M + S
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSE-GNRSV 59
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
++ +M+ K + ++ M+ + TY LV+ F + G +++ + E
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 285 LQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRASYNIMVDA 327
+ G +AY+A++ R +S ++ GC+P+ YN +++
Sbjct: 120 AEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLING 173
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
YL+LLD+ P + +L++ SG L A +F EM + G+PP+ V +N+ + G+ K
Sbjct: 232 YLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCK 291
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ A + M + P TY + KA + A+++F EMR PN
Sbjct: 292 ASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVV 351
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
+T L++A +EG E+ ++ GI+ D+ AYNAL A ++ M
Sbjct: 352 FTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMR 411
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
+ G +PD+ +Y ++D + + G
Sbjct: 412 NNGLKPDKVTYTTLIDGFCKEG 433
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + E+L PT T+ L+ C + L A A+ M K G+ P Y +++
Sbjct: 263 ARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQ 322
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K G Q AVE+F+ M+ P+T +T +I+ + K L+L EM + K
Sbjct: 323 GLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKT 382
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM- 312
++ Y AL N R + A +I E+++ G++PD Y L++ + L M M
Sbjct: 383 DLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMK 442
Query: 313 ------GCEPDRASYNIMVDAYGRAG 332
G D +Y ++ ++G
Sbjct: 443 QEMSDEGVALDEVTYTTLISGLSKSG 468
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L C L+ A + EMR GL P V Y + IDG K G A+E+ Q M
Sbjct: 387 YNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMS 446
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ TYT +I+ K+ +S + ++ EM +P+ TYT +++AF + +
Sbjct: 447 DEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMV 325
++ +++Q G +P V YN +M + ++ +M ++G PD +YNI++
Sbjct: 507 TGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILL 566
Query: 326 DAYGRAG 332
D + + G
Sbjct: 567 DGHCKHG 573
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A E+ ++ P + TY L+ +C G L+ A + +EM G+ V Y +
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I GL K G + I M +P TYT++I+ + K S KL EM++
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR 520
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KP + TY ++N F G + A+ + + G+ PD YN L++ +
Sbjct: 521 KPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGH 569
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L+ A+C G + + REM G+ V YN+ +GL + + + A +I
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ + +P TYT +I+ + K + MA+++ EM + TYT L++ ++
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLISRM-HMGCEPDRAS 320
G ++E I ++ AG+EPD Y +++A ++L+ M + G +P +
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVT 526
Query: 321 YNIMVDAY 328
YN++++ +
Sbjct: 527 YNVVMNGF 534
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ D E TY L+ SG +E + EM + GL P Y ID K
Sbjct: 444 EMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNS 503
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ + ++ + M+ +P TY +++N + + A L N M + P+ TY
Sbjct: 504 DVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYN 563
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++ + G +AEE+ G+ D Y +L+ +
Sbjct: 564 ILLDGHCKHGKVRDAEEL---KSAKGMVSDFGLYTSLINEF 601
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Query: 87 DSLPPTHATWDDLIN---------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
+ L P T+ LI+ ++++++ + + L LI +
Sbjct: 413 NGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVD 472
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+E E++++ P TY +++ A+C + ++ + +EM+ G P V YN ++
Sbjct: 473 SERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMN 532
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CK 256
G G + A + M P TY ++++ + K K ++ E++S K
Sbjct: 533 GFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGK----VRDAEELKSAKGMV 588
Query: 257 PNICTYTALVNAFARE 272
+ YT+L+N F ++
Sbjct: 589 SDFGLYTSLINEFVKK 604
>gi|298711148|emb|CBJ32373.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TYA +++A + G E++ ++ EM + G+ P+ VVYN+ I +LKG +KA +I
Sbjct: 553 PDEYTYAAMMRASGIDGSWEESWSMLVEMEQAGVRPNRVVYNTLIASVLKGEQMEKADDI 612
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM+ P TYT +++ + S A L +EM S KPN T TA++ +
Sbjct: 613 LNRMREGGVPPDVTTYTTIMSGCKRESDWRRAEALLSEMESFGVKPNSRTLTAVLKVYGD 672
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G E A +FEQ +G+ DV +N LM L SRM G EPD +
Sbjct: 673 AGEVERALALFEQYDASGMVMDVICFNTLMGPVLKKDDPETVLELFSRMESRGVEPDSLT 732
Query: 321 YNIMVDAYGRAGLHE 335
++++ A +AG E
Sbjct: 733 MSLVLRAAEQAGAAE 747
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVF 177
S + I AYG K ++AE + + + P Y+ ++KA G ++A
Sbjct: 412 SITYVSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGGQWKRALETL 471
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET----YTLMINL 233
EMR+ GL VVY + I K G +KA++ ++ + +P + Y I+
Sbjct: 472 DEMRECGLSADPVVYTAAIGACEKFGQWEKALDTLSKLVSE--KPPMRSLMWGYNAAISA 529
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
GKA + L M++ KP+ TY A++ A +G EE+ + +++ AG+ P+
Sbjct: 530 LGKAKQMEGIKDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQAGVRPN 589
Query: 294 VYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
YN L+ +A +++RM G PD +Y ++
Sbjct: 590 RVVYNTLIASVLKGEQMEKADDILNRMREGGVPPDVTTYTTIM 632
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 19/233 (8%)
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
+S V ++ Y + A E+ + E TY + A +G +A A
Sbjct: 231 LSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAGKWMQAAAFL 290
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
MR+ G+PP+ + YN+ I G P KA R +P++ L
Sbjct: 291 PRMREDGVPPNTIAYNTVIGACAFFGRPNKAWN-NNRETSSFLRPTSTRENKGRGLSPAQ 349
Query: 238 SKSF----MALKLFNEMRSHKCKPNICTYTALVNAFAREGL--CEEAEEIFEQLQGAGIE 291
+++ AL L EM+ +P+I TY +L++A + GL + E+FE L +G++
Sbjct: 350 AEASDAGDFALGLMEEMKREGVEPDIITYGSLMSALSPRGLAGADIVLELFETLAKSGLK 409
Query: 292 PDVYAYNALMEAY----------RLISRMHM--GCEPDRASYNIMVDAYGRAG 332
P+ Y + + AY +++ M G EP+R Y+ +V A G
Sbjct: 410 PNSITYVSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGG 462
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
++S ++AE E+ P T +LK Y +G +E+A A+F + G+ +
Sbjct: 637 RESDWRRAEALLSEMESFGVKPNSRTLTAVLKVYGDAGEVERALALFEQYDASGMVMDVI 696
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+N+ + +LK +P+ +E+F RM+ +P + T +L++ +A + A L +M
Sbjct: 697 CFNTLMGPVLKKDDPETVLELFSRMESRGVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKM 756
Query: 251 RSH 253
R
Sbjct: 757 REE 759
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +P TY L+ C+ G A +F M +G + YN I GL
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG+ +KA+ +F++M + P+ TY +IN Y A +L + M+ + C+P+ T
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
Y LV+ F++ G E A F+++ G+ P+ +Y AL++ A L+ RM
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 311 HMGCEPDRASYNIMVDAYGR 330
MGC P+ SYN +++ +
Sbjct: 541 EMGCNPNVESYNAVINGLSK 560
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + + A F + E+++ P +Y L+ + G ++ A ++ + M + G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ I+GL K +A +I +M P+ TYT +I+ + ++ A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F++M KC PN+ TY++L+ +EG +EAE + ++++ G+ PD + +L++ +
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663
Query: 305 RLISRM-----------HMGCEPDRASYNIMV 325
++ R+ MGC+P+ +Y++++
Sbjct: 664 VVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLL 695
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ TY ++K C+ G +EKA +F +M K G P+ V YN+ I+G L GN A
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ MK + C+P TY +++ + K K A F EM PN +YTAL++ +
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHS 524
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRA 319
++G + A + ++++ G P+V +YNA++ EA ++ +M G P+
Sbjct: 525 KDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVI 584
Query: 320 SYNIMVDAYGRAG 332
+Y ++D R G
Sbjct: 585 TYTTLIDGLCRNG 597
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++ C P E TY L+ + G LE A F+EM + GL P+ V Y + IDG K G
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ + +RM+ C P+ E+Y +IN K ++ A K+ ++M PN+ TYT L+
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCE 315
+ R G + A +IF ++ P++Y Y++L+ EA L+ M G
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 650
Query: 316 PDRASYNIMVDAYGRAG 332
PD ++ ++D + G
Sbjct: 651 PDEVTFTSLIDGFVVLG 667
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ PT TY L + A C E+A + M+K G P+ Y + I GL + G
Sbjct: 293 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+ ++ +M ++ P+T TY +IN + ALK+F+ M H N TY
Sbjct: 353 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 412
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
++ G E+A +FE++ G P V YN L+ Y RL+ M
Sbjct: 413 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSY--SLVELSVKHYPA 352
GCEPD +YN +V + + G E Y +VE + P
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K ++AE ++ P TY L+ +C + L+ A VF M K G
Sbjct: 204 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 263
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P++V Y++ I+GL G +A+++ + M +P+ TYTL I A+
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L M+ C+PN+ TYTAL++ +R G E A ++ ++ G+ P+ YNAL+
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
L SC ++L+ + + + A Y ++L+S P+ T+ L+ G + +AE +
Sbjct: 163 LYSCNTLLI--QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 220
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
++ +Y L P Y S I G + N A +F RM ++ C P++ TY+ +IN
Sbjct: 221 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 280
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ AL + EM +P + TYT + A EEA E+ +++ G P+V
Sbjct: 281 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340
Query: 297 YNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
Y AL+ + ++ + G P+ +YN +++ G
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P ++Y ++ +AE + +M + GL P+ + Y + IDGL + G Q A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+IF M++ C P+ TY+ +I + K+ A L EM P+ T+T+L++ F
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA------------YRLISRMHMGCEP 316
G + A + ++ G +P+ Y+ L++ + L+ +GC P
Sbjct: 664 VVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIFPLVDNYFLGCNP 722
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I +++ +AE ++++ +P TY L+ C +G + A +F +M K
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ Y+S I GL + G +A + + M+R P T+T +I+ + + A
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 673
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
L M CKPN TY+ L+ +E L E E+IF
Sbjct: 674 LLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE-EKIF 710
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 46/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L++KA + + E+ G S N+ + L K + A +
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA------- 264
+++M QPS T+ +IN+ K K A + +++ + P++ TYT+
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245
Query: 265 ----------------------------LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
L+N EG +EA ++ E++ GIEP VY
Sbjct: 246 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 305
Query: 297 YNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y + A L++RM GC P+ +Y ++ R G
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
L L KK+ V + ++ LL ++ G+ L K+A T E L R P TY +LL +C
Sbjct: 266 LELMKKYKYKVGVETINCLL-DSLGRAKLGKEA-LTIFEKLHGRFTPNLQTYTVLLNGWC 323
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
L +A ++ +M P V +N+ ++GLL+ A+++F+ MK P +
Sbjct: 324 RVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVK 383
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+YT+++ + K +K A++ F EM+ C+P+ YT L+ F + + + +++
Sbjct: 384 SYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM 443
Query: 286 QGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+ G PD YNAL+ +A R+ +M G +P +Y++M+ +Y
Sbjct: 444 KANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSY 497
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 106 LRLNKKWDPIVLMSCVS-----------ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTE 154
LR K+ D I L + +L+ + +++ K+A + E+ + C P
Sbjct: 358 LRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDA 417
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
Y L+ + ++ + +EM+ G PP YN+ I + P AV I+++
Sbjct: 418 AIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 477
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + +P+T TY++M+ Y + M + ++EM+ C P+ +YT + G
Sbjct: 478 MIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGR 537
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYN 298
C EA + E++ G++ YN
Sbjct: 538 CAEAGKYLEEMIEKGMKAPQLDYN 561
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ LE + + + T +T+ + KA+ + +KA V M+KY N +D L
Sbjct: 230 SLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLG 289
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ ++A+ IF+++ P+ +TYT+++N + + A K++N+M KP+I
Sbjct: 290 RAKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIV 348
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
+ ++ R +A ++FE ++ G PDV +Y L+ EA + M
Sbjct: 349 AHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEM 408
Query: 311 H-MGCEPDRASYNIMVDAYG 329
GC PD A Y ++ +G
Sbjct: 409 QGAGCRPDAAIYTCLITGFG 428
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L++ +C +++A F EM+ G P A +Y I G +
Sbjct: 380 PDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGL 439
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MK + C P +TY +I L A++++ +M + KP TY+ ++ ++ +
Sbjct: 440 LKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQ 499
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
E +++++ G PD +Y + EA + + M G + +
Sbjct: 500 TRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLD 559
Query: 321 YNIMVDAYGRAG 332
YN + RAG
Sbjct: 560 YNKFAADFSRAG 571
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 66/165 (40%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +G + E+ + C P TY L+K + + A ++++M + G
Sbjct: 423 LITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENG 482
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ Y+ + + N + V + MK C P +YT+ I + A
Sbjct: 483 IKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAG 542
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
K EM K Y F+R G + EE+ ++++ +G
Sbjct: 543 KYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSG 587
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y KA F + + P +Y++++ C + ++++A +F+EM
Sbjct: 315 LMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKS 374
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YNS IDGLLK G A ++ M TY+ +++ K + A+
Sbjct: 375 MAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAI 434
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L +++ +PNI TYT LV+ + G ++A+ +++ L G DV YN ++
Sbjct: 435 TLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGL 494
Query: 302 -------EAYRLISRMH-MGCEPDRASYNIMVDA 327
EA L+S+M GC PD +Y +V A
Sbjct: 495 CKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRA 528
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+A + ++L P T+ +L+ C G ++KA V M K G+ + V YNS
Sbjct: 256 KEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSL 315
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+DG KA +F M R P ++Y++MIN K A+ LF EM S
Sbjct: 316 MDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSM 375
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
PN TY +L++ + G +A ++ ++ G DV Y++L++A
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG-LHEGKCSYSLVELSVKHY 350
LI+++ G +P+ +Y I+VD + G L + + Y +L +K Y
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQ--DLLIKGY 480
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ R P TY L+ + G L++A +F +M + P +N +DGL K G
Sbjct: 229 EMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEG 288
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+KA + M + + TY +++ Y + A +FN M P++ +Y+
Sbjct: 289 EMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYS 348
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG 313
++N + + +EA +F+++ + P+ YN+L+ +A+ L++ MH
Sbjct: 349 IMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNR 408
Query: 314 CEP-DRASYNIMVDA 327
+P D +Y+ ++DA
Sbjct: 409 GQPADVITYSSLLDA 423
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+K C++G + +A ++ G V Y + I+GL K G + A+++
Sbjct: 132 PDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQV 191
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++ QP+ Y +I+ K A L +EM + P++ TYT L+
Sbjct: 192 LRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLI 251
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
G +EA +F Q+ I+PDVY +N L++ L + G + + +
Sbjct: 252 VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVT 311
Query: 321 YNIMVDAY 328
YN ++D Y
Sbjct: 312 YNSLMDGY 319
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 15/214 (7%)
Query: 132 KSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+ +A L +D + P Y ++ + C L+ A + EM + P V
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y + I G L G ++AV +F +M +P T+ ++++ K + A + M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
NI TY +L++ + +A +F + G+ PDV +Y+ ++
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360
Query: 302 -EAYRLISRMH-MGCEPDRASYNIMVDA---YGR 330
EA L MH P+ +YN ++D YGR
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ LL A C + ++KA + +++ G+ P+ Y +DGL K G + A ++Q +
Sbjct: 416 TYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDL 475
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ Y +M+N K AL L ++M + C P+ TY LV A
Sbjct: 476 LIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKN 535
Query: 276 EEAEEIFEQL--QGAGIEPDVYAYNALMEAYR 305
++A ++ ++ QG+ + ++ + N+++ Y+
Sbjct: 536 DKAVKLLREMIVQGSAVGSNI-SSNSMLCVYQ 566
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 88 SLPPTHATWDDLINVSVQL-RLNKKWD----------PIVLMSCVSILLIEAYGQKSLHK 136
S+ P T++ LI+ ++ R++ WD P +++ S+L +A +
Sbjct: 374 SMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLL--DALCKNHQVD 431
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA ++ D P TY +L+ C +G L+ A+AV++++ G +YN +
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+GL K G +A+ + +M+ + C P TY ++ + K+ A+KL EM
Sbjct: 492 NGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C SG L+ A+A+ ++M G P+ V Y + IDGL K P A++ +RM
Sbjct: 47 TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 106
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK-PNICTYTALVNAFAREGL 274
R C+P TY +I+ A++ A + E+ + P++ TY ++ + G
Sbjct: 107 LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGK 166
Query: 275 CEEAEEIFEQLQGAGIEPDVYAY----------NALMEAYRLISRM-HMGCEPDRASYNI 323
++ E+ E++ GI PDV + N + +A+++ M GC PD +Y+I
Sbjct: 167 LDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSI 226
Query: 324 MVDAYGRA 331
M+D RA
Sbjct: 227 MLDNLSRA 234
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE-MRKYGLPPSAVVYNSYIDGL 199
T +L S C P TY L+ CM+ ++ A V +E M + G P V YN++I GL
Sbjct: 102 TVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGL 161
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G K +E+ + M R P T+ +I+ KA++ A ++F M C P+
Sbjct: 162 CKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 221
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAG--------------------IEPDVYAYNA 299
TY+ +++ +R + EE+ E + +G IE +AY
Sbjct: 222 LTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQ 281
Query: 300 LMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
MEA GC + ++N + A R+G
Sbjct: 282 AMEA---------GCVMEVYTHNAFIGALCRSG 305
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
A +YN+ I GL K P+ A+E+ M + S TYT +I+ K+ A L
Sbjct: 10 AAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQ 69
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+M C PN+ TYTAL++ + +A + +++ +G EPD+ YN+L+ + +
Sbjct: 70 KMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMAN 129
Query: 309 RM------------HMGCEPDRASYNIMVDAYGRAG 332
RM G PD +YN + +AG
Sbjct: 130 RMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAG 165
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A + + A + Y + +++ C+ T+ + A C SG A+ + M + G
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ + YN IDGL K GN A ++ ++M CC+P + +I+ + KA + A
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381
Query: 244 LKLFNEMRSHK-CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+L EM++ C P++ TY +++ ++ G ++A+ + E++Q G
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 55/239 (23%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+++S IP TY + C +G L+K + EM + G+ P V + S I GL K
Sbjct: 142 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANR 201
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN----IC 260
A ++F+ M C P + TY++M++ +A++ L E+ H K
Sbjct: 202 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANR----LDTVEEVLEHMVKSGHYALSA 257
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAG------------------------------- 289
TY L++A R G E A +EQ AG
Sbjct: 258 TYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGM 317
Query: 290 IE----PDVYAYNALM----------EAYRLISRMHMG--CEPDRASYNIMVDAYGRAG 332
IE P++ +YN ++ +A++L +M C+PD +N ++ + +AG
Sbjct: 318 IESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAG 376
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + A+ ++ D+ C P TY L+ C + A + M + G
Sbjct: 51 LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 110
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQ-PSTETYTLMINLYGKASKSFMA 243
P V YNS I GL A + Q + + + P TY I+ KA K
Sbjct: 111 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKG 170
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ EM P++ T+ ++++ + ++A ++F+ + G PD Y+ +++
Sbjct: 171 LEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDN 230
Query: 304 YRLISRM--------HM---GCEPDRASYNIMVDAYGRAG 332
+R+ HM G A+Y ++ A RAG
Sbjct: 231 LSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAG 270
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 13/201 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L+ C+P TY+++L + L+ E V M K G + Y I L++ G+
Sbjct: 212 MLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGD 271
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ A +++ C T+ I ++ K +A + M PN+ +Y
Sbjct: 272 IESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNF 331
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALMEAYRLISRMHMG---------- 313
+++ + G ++A ++ ++ +G +PDV +N L+ + R+
Sbjct: 332 VIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAK 391
Query: 314 --CEPDRASYNIMVDAYGRAG 332
C PD +YN M+D + G
Sbjct: 392 NICVPDVVTYNTMIDGQSKFG 412
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM ++ PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A L M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGHLETAFEY 333
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S + A + E+L++ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E +YG P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E E+A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
V++ I L+ G + A+E ++ K + +T +I K + + E
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEES 127
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
+ ++ + L+++F +EG A+ +F+ + G+ P V ++N LM
Sbjct: 128 LEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187
Query: 302 -EAYRLISRMHM-GCEPDRASYNIMVDA 327
E +RL + M G +PD +Y+++++
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLING 215
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D +L+ C +G +A + ++ + G+ V+YN+ L K +++++
Sbjct: 419 DACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEK 478
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK+D P T TY ++I+ +G+A K A+K+F E+ KP+ C+Y +L+N + G
Sbjct: 479 MKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGH 538
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA F+++ G+ PDV Y+ L+E + ++ M GC P+ +YNI
Sbjct: 539 LDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNI 598
Query: 324 MVDAYGRAG 332
++D R+G
Sbjct: 599 LLDCLERSG 607
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +L+ ++ +G +++A +F E+ P YNS I+ L K G+ +A
Sbjct: 485 LPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHM 544
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F+ M P TY+ +I +GK K MA +LF+EM + C PNI TY L++
Sbjct: 545 KFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLE 604
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R G EA +++ +L+ G+ PD Y+ L
Sbjct: 605 RSGRTAEAVDLYAKLKQQGLIPDSITYSVL 634
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++AY S EK AV+ EM+K G +N +D L+K A ++F+ M
Sbjct: 213 TYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDM 272
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
KR C+P TYT+MI + GK K +L+LF EM + PN+ Y ++ A A +
Sbjct: 273 KRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMV 332
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++A +F ++ P + Y+ ++ ++H
Sbjct: 333 DKAILLFLKMVEKECRPSEFTYSVILHLLATERKLH 368
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 52/277 (18%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
LNK + P V+ +I+A + KA +L++++ C P+E TY+++L
Sbjct: 308 LNKGYSPNVIAYNT---MIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATE 364
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF-------QRMKRDCC 220
L K + V +KY S +Y + L K G+ +A +F +R RD C
Sbjct: 365 RKLHKLDEVVEVSKKYM---SRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDAC 421
Query: 221 QPSTETY------TLMINLYGKASKS------------FMAL----------KLFNEMRS 252
E T I+L GK + F AL L+ +M+
Sbjct: 422 VSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQ 481
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------E 302
P+ TY L+++F R G +EA +IFE+L+ + +PD +YN+L+ E
Sbjct: 482 DGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDE 541
Query: 303 AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
A+ M G PD +Y+ +++ +G+ E C
Sbjct: 542 AHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMAC 578
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
++K+GL + Y + L+ N +K ++ MK+ + ++++ K S+
Sbjct: 202 IKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSE 261
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A K+F +M+ C+P+ TYT ++ + G +E+ E+FE++ G P+V AYN
Sbjct: 262 VDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNT 321
Query: 300 LMEAY---RLISR--------MHMGCEPDRASYNIMV 325
+++A R++ + + C P +Y++++
Sbjct: 322 MIQALANARMVDKAILLFLKMVEKECRPSEFTYSVIL 358
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++G+ +A + EL DS P +Y L+ +G L++A F+EM +
Sbjct: 493 ILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEK 552
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P V Y++ I+ K + A +F M + C P+ TY ++++ ++ ++ A
Sbjct: 553 GLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEA 612
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
+ L+ +++ P+ TY+ L
Sbjct: 613 VDLYAKLKQQGLIPDSITYSVL 634
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 64 PTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSI 123
P + R + E++ N + + ++ +++ ++ + L KKW + +
Sbjct: 157 PDRFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLIKKWG-LRMTGYTYK 215
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++AY + +K YLE+ + + +LL A ++ A VF +M++
Sbjct: 216 CLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRK 275
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P Y I K G P +++E+F+ M P+ Y MI A A
Sbjct: 276 HCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKA 335
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ LF +M +C+P+ TY+ +++ A E + +E+ E + + +YAY
Sbjct: 336 ILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVVE-VSKKYMSRSIYAY 388
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A + E+ + P TY+ L++ + + +E A +F EM G
Sbjct: 529 LINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEG 588
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
P+ V YN +D L + G +AV+++ ++K+ P + TY+++ L
Sbjct: 589 CYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVLARL 637
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 191 VYNSYIDGLLKGGNPQK---AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
Y+ I L K P + A I M+R+ + S T ++I Y + + L
Sbjct: 143 TYSRIILILSKSNLPDRFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGL- 201
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---- 303
++ + TY LV A+ R E+ ++ +++ G D++A+N L++A
Sbjct: 202 --IKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKD 259
Query: 304 ------YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y++ M CEPD +Y IM+ G+ G
Sbjct: 260 SEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIG 295
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++K C+ G +EKA +F +M K G P+ V YN+ I+G L GN A + M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K + C+P TY +++ + K K A F EM PN +YT L++ +++G
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+ A + E+++ G P+V +YNA++ EA ++ +M G P+ +Y +
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631
Query: 325 VDAYGRAG 332
+D R G
Sbjct: 632 IDGLCRNG 639
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +P TY L+ C+ G A +F M +G + YN I GL
Sbjct: 403 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 462
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG+ +KA+ +F++M + P+ TY +IN Y A +L + M+ + C+P+ T
Sbjct: 463 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 522
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
Y LV+ F++ G E A F+++ G+ P+ +Y L++ A L+ RM
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582
Query: 311 HMGCEPDRASYNIMVDAYGR 330
MGC P+ SYN +++ +
Sbjct: 583 EMGCNPNVESYNAVINGLSK 602
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
++ C P E TY L+ + G LE A F+EM + GL P+ V Y + IDG K G
Sbjct: 513 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVD 572
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+ + +RM+ C P+ E+Y +IN K ++ A K+ ++M PN+ TYT L+
Sbjct: 573 IALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLI 632
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCE 315
+ R G + A +IF ++ P++Y Y++L+ EA L+ M G
Sbjct: 633 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 692
Query: 316 PDRASYNIMVDAYGRAG 332
PD ++ ++D + G
Sbjct: 693 PDEVTFTSLIDGFVVLG 709
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ PT TY L + A C E+A + M+K G P+ Y + I GL + G
Sbjct: 335 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+ ++ +M ++ P+T TY +IN + ALK+F+ M H N TY
Sbjct: 395 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 454
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
++ G E+A +FE++ G P V YN L+ Y RL+ M
Sbjct: 455 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 514
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSY--SLVELSVKHYPA 352
GCEPD +YN +V + + G E Y +VE + P
Sbjct: 515 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 556
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K ++AE ++ P TY L+ +C + L+ A VF M K G
Sbjct: 246 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 305
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P++V Y++ I+GL G +A+++ + M +P+ TYTL I A+
Sbjct: 306 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 365
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L M+ C+PN+ TYTAL++ +R G E A ++ ++ G+ P+ YNAL+
Sbjct: 366 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 422
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 24/180 (13%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C+P TY+ L+ C G ++AE + +EM + GL P V + S IDG + G A
Sbjct: 655 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 714
Query: 209 VEIFQRMKRDCCQPSTETYTLMIN--------------LYGKASKSF----------MAL 244
+ +RM C+P+ TY++++ + +A SF +
Sbjct: 715 FLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVS 774
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L M C+P + TY+ LV+ R+G EAE++ + ++ G PD Y +L+ A+
Sbjct: 775 NLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAH 834
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 35/218 (16%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P ++Y ++ +AE + +M + GL P+ + Y + IDGL + G Q A
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAF 645
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+IF M++ C P+ TY+ +I + K+ A L EM P+ T+T+L++ F
Sbjct: 646 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR------------------------ 305
G + A + ++ G +P+ Y+ L++ +
Sbjct: 706 VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHE 765
Query: 306 ----------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++RM +GCEP +Y+ +V R G
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKG 803
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 117 LMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAV 176
L SC ++L+ + + + A Y ++L+S P+ T+ L+ G + +AE +
Sbjct: 205 LYSCNTLLI--QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 262
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
++ +Y L P Y S I G + N A +F RM ++ C P++ TY+ +IN
Sbjct: 263 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 322
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ AL + EM +P + TYT + A EEA E+ +++ G P+V
Sbjct: 323 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 382
Query: 297 YNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
Y AL+ + ++ + G P+ +YN +++ G
Sbjct: 383 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 429
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT DTY+ L+ C G +AE + ++M++ G P +Y S + K A+
Sbjct: 785 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 844
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+IF ++ Q Y +I KA + A LF+ M + + +T LV+
Sbjct: 845 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+EG + ++ ++ P++ Y L
Sbjct: 905 LKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 46/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L++KA + + E+ G S N+ + L K + A +
Sbjct: 168 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 227
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA------- 264
+++M QPS T+ +IN+ K K A + +++ + P++ TYT+
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 287
Query: 265 ----------------------------LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
L+N EG +EA ++ E++ GIEP VY
Sbjct: 288 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 347
Query: 297 YNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
Y + A L++RM GC P+ +Y ++ R G
Sbjct: 348 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 145 LLDSRCIPTEDTYALLLKAY---CMSGLLEKAEAVFRE---------------------- 179
++D C P TY++LLK C+ LLE+ AV E
Sbjct: 721 MVDVGCKPNYRTYSVLLKGLQKECL--LLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLA 778
Query: 180 -MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
M + G P+ Y++ + GL + G +A ++ + MK P E Y ++ + K
Sbjct: 779 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 838
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ ALK+F+ + + + ++ Y AL+ A + G EEA+ +F+ + D +
Sbjct: 839 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWT 898
Query: 299 ALMEA 303
L++
Sbjct: 899 VLVDG 903
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + Y LL A+C + ++ A +F + G +Y + I L K G ++A +
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 881
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M +T++++ K + + +KL + M S PNI TY L +R
Sbjct: 882 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 941
Query: 272 EGLCEEAEEIFEQLQ 286
G E+E + ++L+
Sbjct: 942 IGKSIESEPLADKLK 956
>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 22/257 (8%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
T W+ + V LR + P M I LI G+ +KA + E+++ C
Sbjct: 76 TTLRWESALKVFELLREQLWYRPYAGMY---IKLIVMLGKCKQQEKAYELFQEMIEEGCE 132
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ ++Y LL AY SGLL++A ++ EM+ P Y+ I L+ KA
Sbjct: 133 VSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQT 192
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK--LFNEMRSHKCKPNICTYTALVNA 268
+ M +P+T TY I+ YGKA K F ++ L + + CKP++ T + + A
Sbjct: 193 LLSDMVTRGIKPNTITYNTFIDAYGKA-KMFAEMESILVDMLNDDGCKPDVWTMNSTLRA 251
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCE 315
F R G E E+ +E+ Q AGI+P + +N L+++Y + + H
Sbjct: 252 FGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWT 311
Query: 316 PDRASYNIMVDAYGRAG 332
+YNI++DA+GRAG
Sbjct: 312 I--VTYNIVIDAFGRAG 326
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
I+AYG+ + + E +++L D C P T L+A+ SG LE E + + ++
Sbjct: 212 FIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEA 271
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS +N +D K + +K + + M++ + TY ++I+ +G+A
Sbjct: 272 GIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQM 331
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF MRS + KP+ T +LV A+ + G E+ + + ++ + I D YN L++A
Sbjct: 332 EHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDA 391
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
Y +++ M GC+PD+ +Y M AY G+
Sbjct: 392 YGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGM 432
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 171 EKAEAVFREMR-KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A VF +R + P A +Y I L K +KA E+FQ M + C+ S E+YT
Sbjct: 81 ESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTA 140
Query: 230 MINLYGKASKSFMALKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+++ Y ++ A + NEM+ S C+P++ TY+ L+ + + +A+ + +
Sbjct: 141 LLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTR 200
Query: 289 GIEPDVYAYNALMEAY---RLISRMHM---------GCEPDRASYNIMVDAYGRAGLHE 335
GI+P+ YN ++AY ++ + M GC+PD + N + A+GR+G E
Sbjct: 201 GIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLE 259
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ A+G+ + E Y + ++ P+ T+ +LL +Y + EK AV M+KY
Sbjct: 249 LRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHY 308
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK------ 239
+ V YN ID + GN ++ +F+ M+ + +PS T ++ YG+A K
Sbjct: 309 SWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDS 368
Query: 240 ----------------------SFMALKLFNEMR-------SHKCKPNICTYTALVNAFA 270
++ L+ F EM+ CKP+ TY + A++
Sbjct: 369 VLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYS 428
Query: 271 REGLCEEAEEIFEQLQGA 288
G+ A+EI E + A
Sbjct: 429 DGGMANHAKEIQELITTA 446
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY+ ++ A C + ++KA V M K G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS + G G P++A+ ++M D +P TY +++ K + A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI P+ Y ++ L+ AY
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G PD +Y ++ ++G E Y
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ + G L+KA + EM G+ P+ V Y+S I L K KA+
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M ++ P+ TY +++ Y + + A+ +M S +P++ TY +L++
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA ++F+ + G++P++ Y L++ Y + MH G P+
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374
Query: 319 ASYNIMVDAYGRAG 332
++I++ AY + G
Sbjct: 375 YVFSILICAYAKQG 388
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG +E A F +M
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P +VYNS I L KA E I + + R C T + +I+ + K +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVIE 497
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I TY+ L++ + G +EA ++ + G++PD YN L+
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y ISRM G PD +YNI++
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++D R P Y L+ + C+ +KA+ + EM G+ + +NS ID K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++ ++F M R +P TY+ +I+ Y A K A KL M S KP+ TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+N + + E+A +F +++ +G+ PD+ YN +++
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY G +++A VF +MR+ GL P V Y + I L K G + A+
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P Y +I+ K A +L EM + + +++++ +
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++F+ + G++PD+ Y+ L++ Y L +M +G +PD +
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 321 YNIMVDAY 328
YN +++ Y
Sbjct: 552 YNTLINGY 559
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWD 113
IF + IL + R + +TI+ F+S+ +H +I + +R+ K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
I + LI+ Y +A ++ P TY L+ YC +E A
Sbjct: 514 IITYST-----LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+FREM G+ P + YN + GL + A E++ + Q TY ++++
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K + + AL++F + + T+ ++ A + G +EA+++F L G+ PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 294 VYAYNALME 302
V Y+ + E
Sbjct: 689 VRTYSLMAE 697
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL+ Y G L + + M + G+ P+ V++ I K G +A+ +
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M++ P T TY +I + K+ + A++ F +M + P Y +L+++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISR-------MHMGCEPDRAS 320
++A+E+ ++ GI D +N++++++ R+I + +G +PD +
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 321 YNIMVDAYGRAG 332
Y+ ++D Y AG
Sbjct: 517 YSTLIDGYCLAG 528
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P+ ++++I Y K K A+ +F++MR P+ TY ++ +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A FEQ+ + P YN+L+ +A LI M G D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 321 YNIMVDAYGRAG 332
+N ++D++ + G
Sbjct: 482 FNSIIDSHCKEG 493
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ YC++G +++A + M G+ P V YN+ I+G K + A+ +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY +++ + ++ A +L+ + + + TY +++ +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A + R G PD +
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 321 YNIMVD 326
Y++M +
Sbjct: 692 YSLMAE 697
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
R P +Y +++ +C ++++A +F EM G+ P V YNS IDGL K G A
Sbjct: 328 RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYA 387
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+ M +C TY +I+++ K A+ L +++ H +PN+CTY L++
Sbjct: 388 WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDG 447
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPD 317
+ G + A+++F+ L G + + YN ++ EA L+S+M G PD
Sbjct: 448 LCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPD 507
Query: 318 RASYNIMVDA 327
+Y ++ A
Sbjct: 508 AVTYETIIQA 517
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 99 LINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYA 158
L+N +V + + I+ C L+ +AYG Y E++ R PT T++
Sbjct: 188 LVNTNVVM-----YSTIIDGLCKDKLVTDAYG----------LYSEMIVKRIPPTVVTFS 232
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
L+ +C+ G + A +F EM + P A +N +D L K G ++A + M ++
Sbjct: 233 SLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKE 292
Query: 219 CCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P+ TY +++ L + K+ L + + MR PN +Y ++N F + +
Sbjct: 293 GVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR---VAPNSRSYNIMINGFCKIKMV 349
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGCEP-DRASYNIM 324
+EA +F ++ GI P YN+L++ A+ L+ MH C P D +YN +
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409
Query: 325 VDAY 328
+D +
Sbjct: 410 IDVF 413
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C G A V R++ + + V+Y++ IDGL K A ++ M
Sbjct: 160 TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEM 219
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T++ +I + K A +LFNEM P+ T+ LV+A +EG
Sbjct: 220 IVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKI 279
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCEPDRASYN 322
+EA+ + + G+EP V YN LM+ Y +ISRM + P+ SYN
Sbjct: 280 KEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA--PNSRSYN 337
Query: 323 IMVDAY 328
IM++ +
Sbjct: 338 IMINGF 343
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A + E++ P T+ +L+ A C G +++A+ V M K G+ P+ V YN+
Sbjct: 245 KDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTL 304
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+DG KA + + R P++ +Y +MIN + K AL LF+EM
Sbjct: 305 MDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGI 364
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
P+ TY +L++ + G A E+ +++ I D+ YN+L++ +
Sbjct: 365 APHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIA 424
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ ++ G +P+ +YNI++D + G
Sbjct: 425 LVKKIKEHGIQPNMCTYNILIDGLCKGG 452
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 144 ELLD---SRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
EL+D + CIP + TY L+ +C + ++KA A+ ++++++G+ P+ YN IDGL
Sbjct: 389 ELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGL 448
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
KGG + A ++FQ + + TY +MIN K A L ++M + P+
Sbjct: 449 CKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDA 508
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
TY ++ A + E+A+++ ++ G+ VYA+
Sbjct: 509 VTYETIIQALFHKDENEKAQKLLREMVIKGVV--VYAF 544
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 140 FTYLELLDSRCIPTEDTYA------LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
FT L++ C + T+A +L C++G + +A + G + V Y
Sbjct: 103 FTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYG 162
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I+GL K G + A+++ ++++ + Y+ +I+ K A L++EM
Sbjct: 163 ILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVK 222
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
+ P + T+++L+ F G ++A +F ++ I PD Y +N L+ EA
Sbjct: 223 RIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEA 282
Query: 304 YRLIS-RMHMGCEPDRASYNIMVDAY 328
+I+ M G EP +YN ++D Y
Sbjct: 283 KNVIAVMMKEGVEPTVVTYNTLMDGY 308
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/232 (18%), Positives = 88/232 (37%), Gaps = 68/232 (29%)
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETY 227
+++ A F MR+ PS V +N + L+K N V + +M+ +P T
Sbjct: 46 VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105
Query: 228 TLMINLY------------------------GKASKSFM--------------------- 242
+++IN Y GK +++ +
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILI 165
Query: 243 -----------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
AL++ ++ N+ Y+ +++ ++ L +A ++ ++ I
Sbjct: 166 NGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIP 225
Query: 292 PDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
P V +++L+ +A+RL + M M PD ++NI+VDA + G
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEG 277
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+L R P TY+ ++ A C + ++KA V M K G
Sbjct: 210 VINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 269
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + Y+S + G G P++ + +M+ D +P+ TY ++N K + A
Sbjct: 270 VMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKAR 329
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M +P+I TY L+ +A +G E + + + GI+PD + +N L+ AY
Sbjct: 330 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 389
Query: 305 R----------LISRMHM-GCEPDRASYNIMVDAYGRAG 332
+ S+M G P+ Y ++D ++G
Sbjct: 390 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 428
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ + G +KA + + EM + P+ V Y+S I L K KA+E+
Sbjct: 202 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEV 261
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M ++ P TY+ +++ Y + + + N+MRS +PN+ TY +L+N +
Sbjct: 262 LNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCK 321
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMHM--------GCEPDRAS 320
G C +A +IF+ + G+EPD+ Y L++ Y + MH G +PD
Sbjct: 322 NGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 381
Query: 321 YNIMVDAYGR 330
+NI++ AY +
Sbjct: 382 FNILICAYAK 391
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM---RKYGLPPSAVVYNSYIDGLLKGGNPQ 206
C+P + +LLK C ++A + M R G PP V Y + I+G K G+
Sbjct: 162 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 221
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
KA + M P+ TY+ +I KA A+++ N M + P+ TY++++
Sbjct: 222 KAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSIL 281
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ + G +E +++ G+EP+V Y +LM +A ++ M G E
Sbjct: 282 HGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLE 341
Query: 316 PDRASYNIMVDAYGRAG 332
PD A+Y ++ Y G
Sbjct: 342 PDIATYRTLLQGYATKG 358
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G KA +F M K GL P Y + + G G + +
Sbjct: 307 PNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 366
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ QP + ++I Y K K A+ +F++MR H PN+ Y +++ +
Sbjct: 367 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 426
Query: 272 EGLCEEAEEIFEQLQGAGIEPDV 294
G ++A FEQ+ G+ P++
Sbjct: 427 SGSVDDAMLYFEQMIDEGLTPNI 449
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY+ ++ A C + ++KA V M K G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS + G G P++A+ ++M D +P TY +++ K + A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI P+ Y ++ L+ AY
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G PD +Y ++ ++G E Y
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ + G L+KA + EM G+ P+ V Y+S I L K KA+
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M ++ P+ TY +++ Y + + A+ +M S +P++ TY +L++
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA ++F+ + G++P++ Y L++ Y + MH G P+
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374
Query: 319 ASYNIMVDAYGRAG 332
++I++ AY + G
Sbjct: 375 YVFSILICAYAKQG 388
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG +E A F +M
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P +VYNS I L KA E I + + R C T + +I+ + K +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVIE 497
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I TY+ L++ + G +EA ++ + G++PD YN L+
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y ISRM G PD +YNI++
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++D R P Y L+ + C+ +KA+ + EM G+ + +NS ID K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++ ++F M R +P TY+ +I+ Y A K A KL M S KP+ TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+N + + E+A +F +++ +G+ PD+ YN +++
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY G +++A VF +MR+ GL P V Y + I L K G + A+
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P Y +I+ K A +L EM + + +++++ +
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++F+ + G++PD+ Y+ L++ Y L +M +G +PD +
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 321 YNIMVDAY 328
YN +++ Y
Sbjct: 552 YNTLINGY 559
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWD 113
IF + IL + R + +TI+ F+S+ +H +I + +R+ K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
I + LI+ Y +A ++ P TY L+ YC +E A
Sbjct: 514 IITYST-----LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+FREM G+ P + YN + GL + A E++ + Q TY ++++
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K + + AL++F + + T+ ++ A + G +EA+++F L G+ PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 294 VYAYNALME 302
V Y+ + E
Sbjct: 689 VRTYSLMAE 697
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL+ Y G L + + M + G+ P+ V++ I K G +A+ +
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M++ P T TY +I + K+ + A++ F +M + P Y +L+++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISR-------MHMGCEPDRAS 320
++A+E+ ++ GI D +N++++++ R+I + +G +PD +
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 321 YNIMVDAYGRAG 332
Y+ ++D Y AG
Sbjct: 517 YSTLIDGYCLAG 528
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P+ ++++I Y K K A+ +F++MR P+ TY ++ +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A FEQ+ + P YN+L+ +A LI M G D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 321 YNIMVDAYGRAG 332
+N ++D++ + G
Sbjct: 482 FNSIIDSHCKEG 493
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ YC++G +++A + M G+ P V YN+ I+G K + A+ +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY +++ + ++ A +L+ + + + TY +++ +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A + R G PD +
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 321 YNIMVD 326
Y++M +
Sbjct: 692 YSLMAE 697
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G ++LH++ + ++ P TY L++ C G +E A VF +M G+ P+A
Sbjct: 169 GAETLHRR-------MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNA 221
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
VV+ ID K G+ + +E+ + M+ +P TY ++N +A A + E
Sbjct: 222 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 281
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
MRS +P+ TYT L++ + +E + A EI + + G+ D Y AL+
Sbjct: 282 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 341
Query: 302 --EAYRLISR-MHMGCEPDRASYNIMVDAYGRAG 332
+A R++ M G EPD +Y +++DA+ R G
Sbjct: 342 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 375
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 11/225 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V +LI+A+ +K + + E+ + P TY ++ C + L+ A +
Sbjct: 221 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 280
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EMR GL P V Y + IDG K A+EI Q M + TYT +I+ KA
Sbjct: 281 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 340
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+S A ++ EM +P+ TYT +++AF R+G + + +++Q G +P V YN
Sbjct: 341 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 400
Query: 299 ALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+M + + +M ++G PD +YNI++D + + G
Sbjct: 401 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 445
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ A+C G E + REMR+ G+ P AV YN+ ++GL + + + A I
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ +P T TYT +I+ Y K + MA+++ M + + TYTAL++ ++
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G +AE + ++ AG+EPD Y +++A+ RL+ M + G +P +
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398
Query: 321 YNIMVDAYGRAG 332
YN++++ + + G
Sbjct: 399 YNVIMNGFCKLG 410
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
YL+LLD+ P + +L++ G L A+ VF EM+ G+ + V +N+ I G+ +
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A + +RM P TY +I + + A +F +M KPN
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH 311
+T L++A ++G E E+ +++ G+ PD YNA++ A ++ M
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283
Query: 312 -MGCEPDRASYNIMVDAY 328
G PD +Y ++D Y
Sbjct: 284 SAGLRPDTVTYTTLIDGY 301
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A A + ++ GLPP A ++N + L++ G A +F M+ + + ++ MI
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ +A A L M P++ TY AL+ R G E+A +FE++ G G++
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 292 PDVYAYNALMEAY------RLISRMH-----MGCEPDRASYNIMVDAYGRA 331
P+ + L++A+ + +H G PD +YN +V+ RA
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 269
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY L+ +G AE V EM + GL P Y ID + G+ + + + +
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M+ +P TY +++N + K + A L N M + P+ TY L++ + G
Sbjct: 386 EMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 445
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ EE+ G PD+ Y +++
Sbjct: 446 KVTDIEELK---SAKGTVPDLGVYTSIV 470
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 88 SLPPTHATWDDLIN---------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKA 138
L P T+ LI+ ++++++ N + + L LI + A
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Query: 139 EFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
E E++++ P TY +++ A+C G ++ + +EM+ G P V YN ++G
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK-P 257
K G + A + M P TY ++++ + K K + E++S K P
Sbjct: 406 FCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK----VTDIEELKSAKGTVP 461
Query: 258 NICTYTALVNAFARE 272
++ YT++V ++
Sbjct: 462 DLGVYTSIVGEIVKK 476
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 141 TYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
TYL + R + P T+ + Y +G + +A F EM +GL P+ +Y I+G
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K GN +A+ IF+ + P +T + I+ K + ALK+F+E++ P++
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISR 309
TY++L++ F ++G E+A E+ +++ GI P+++ YNAL++ A +L
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420
Query: 310 M-HMGCEPDRASYNIMVDAYGRA 331
M G EPD +Y+ M+D Y ++
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKS 443
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ EL + +P TY+ L+ +C G +EKA + EM G+ P+ +YN+ +DGL
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
K G+ Q+A ++F M +P + TY+ MI+ Y K+ A LF+EM S +P+
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RL 306
Y ALV+ +EG E+A +F ++ G + ++N L++ Y +
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM 525
Query: 307 ISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
I++ M PD +Y ++D + +AG E
Sbjct: 526 IAKQIM---PDHVTYTTVIDWHCKAGKME 551
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + +A + E+LD +P Y +L+ + +G L +A ++FR + G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P +++I GLLK G Q+A+++F +K P TY+ +I+ + K + A
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L +EM PNI Y ALV+ + G + A ++F+ + G+EPD Y+ ++
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 440
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA+ L M G +P YN +V + G
Sbjct: 441 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C G +EKA + + M G P++ + I+G + N +A+E+ M
Sbjct: 82 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ PS +Y MIN +A KL +M KPN+ Y+ L+ +A EG
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
EEA + + + +G+ PD++ YNA++ +M G +PD ++
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261
Query: 325 VDAYGRAG 332
+ Y + G
Sbjct: 262 ILGYSKTG 269
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ T+ E+ + P + + L+ + G +++ + M G+P + + YN I
Sbjct: 28 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 87
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
GL K G +KA EI + M C+P++ T+ L+I Y + AL+L +EM
Sbjct: 88 HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 147
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P+ +Y A++N A ++ E++ +G++P+V Y+ L+ EA RL
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 207
Query: 307 ISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
+ M G PD YN ++ +AG E +Y L
Sbjct: 208 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T+ LL++ YC + +A + EM K L PSAV Y + I+GL + A
Sbjct: 111 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 170
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M +P+ Y+ +I Y + A +L + M P+I Y A+++
Sbjct: 171 KLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 230
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
++ G EEA ++QG G++PD + A + Y +M G P+
Sbjct: 231 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 290
Query: 319 ASYNIMVDAYGRAG 332
Y ++++ + +AG
Sbjct: 291 PLYTVLINGHFKAG 304
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ +G +E+A E++ GL P AV + ++I G K G +A + F M
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P+ YT++IN + KA AL +F + + P++ T +A ++ + G +
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
EA ++F +L+ G+ PDV+ Y++L+ +A+ L M + G P+ YN +V
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 402
Query: 326 DAYGRAG 332
D ++G
Sbjct: 403 DGLCKSG 409
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 86/205 (41%), Gaps = 18/205 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y+ L+ Y G +E+A + M G+ P YN+ I L K G ++A
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ +P T+ I Y K K A K F+EM H PN YT L+N +
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EA IF L G+ PDV +A + EA ++ S + G PD +
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362
Query: 321 YNIMVDAYGRAG-------LHEGKC 338
Y+ ++ + + G LH+ C
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMC 387
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C G +EKA +FREM + G + + +N+ IDG K Q+A ++
Sbjct: 463 PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQL 521
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK----------------- 254
FQ M P TYT +I+ + KA K A LF EM+
Sbjct: 522 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKG 581
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
KP+ TY ++ A +E EA ++ +++ G G+ ++ L+ EA
Sbjct: 582 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 641
Query: 305 RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ M +G +P A+ + +V ++ AG
Sbjct: 642 KLLDEMGELGLKPSLAACSTLVRSFHEAG 670
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY- 183
LI+ Y + ++A + E++ + +P TY ++ +C +G +E+A +F+EM++
Sbjct: 505 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 564
Query: 184 ----------------GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G+ P V Y I K N +A ++ + +
Sbjct: 565 LIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIH 624
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
L+I K A KL +EM KP++ + LV +F G +EA +FE ++
Sbjct: 625 DLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 684
Query: 288 AGIEPDV 294
G+ PD
Sbjct: 685 LGLVPDT 691
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P+T TYT++ +A + A F EM+ KP+ +AL++ F REG +E I
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGR 330
+ + GI ++ YN L+ +M +GC+P+ ++ ++++ Y R
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LL + +++L F E + ++ + P E TY L++ A+C L +A + E+
Sbjct: 555 LLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 614
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ +++ I L K + +A ++ M +PS + ++ + +A K
Sbjct: 615 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 674
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
A ++F ++S P+ T LVN + E+A + +QL
Sbjct: 675 ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 104/241 (43%), Gaps = 46/241 (19%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-------------------- 181
Y E+ R P T+ L+L A C SG LEKA V REM
Sbjct: 187 YREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCN 246
Query: 182 ---------------KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
K GL P+ V +NS I G K G +A F MK P+T T
Sbjct: 247 KGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVT 306
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +IN YG+ S MA K++ EM + K +I TY AL+ +EG ++A + ++L
Sbjct: 307 YNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELD 366
Query: 287 GAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+ P+ Y+AL+ A++L M GC P+ ++ ++ A+ + E
Sbjct: 367 KENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFE 426
Query: 336 G 336
G
Sbjct: 427 G 427
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 29/252 (11%)
Query: 110 KKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR------------------CI 151
K +PI L +++ +KS K A+ LL SR C
Sbjct: 67 KTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRMCD 126
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
+ + L K Y A VF M+ YG P+ N+Y+ LL A+
Sbjct: 127 SSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTF 186
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M+R P++ T+ L+++ K+ K A+++ EM S PN+ +Y L+
Sbjct: 187 YREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCN 246
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
+GL A ++ + G+EP+V +N+L+ EA R S M M P+ +
Sbjct: 247 KGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVT 306
Query: 321 YNIMVDAYGRAG 332
YN +++ YG+ G
Sbjct: 307 YNTLINGYGQVG 318
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L + Y + + A + + D +PT ++ L + ++ A +REMR+
Sbjct: 135 LFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCR 194
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ +N + L K G +KAVE+ + M+ P+ +Y +I + +A
Sbjct: 195 ISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIAT 254
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL N M + +PN+ T+ +L++ F +EG EA F +++ + P+ YN L+ Y
Sbjct: 255 KLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGY 314
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+ +M G + D +YN ++ + G
Sbjct: 315 GQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEG 353
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 20/185 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YGQ A Y E++ + TY L+ C G +KA + +E+ K
Sbjct: 310 LINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKEN 369
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+A Y++ I G N +A ++++ M R C P+ +T+ ++ + + K ++ F
Sbjct: 370 LVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVK-NEDFEG- 427
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE--EIFEQLQGAGIEPDVYAYNALME 302
+ L++ FAR + EI++ L G E ME
Sbjct: 428 ----------------AFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEME 471
Query: 303 AYRLI 307
A RLI
Sbjct: 472 ARRLI 476
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ +Y GL++KA +F EM P + YN+ I+ L K G+ +A +
Sbjct: 461 PDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHIL 520
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY+ +I +GK++K MA LF+EM + C PNI TY L++ R
Sbjct: 521 FKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLER 580
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G EA + +E ++ G+ PD Y+ L
Sbjct: 581 RGKTAEAHKHYETMKQQGLTPDSITYSIL 609
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + +L+ C SG +A + M + G+ +YN L K +F +
Sbjct: 394 DAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDK 453
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK P TY +MI+ YG+ A LF EM + CKP++ TY L+N + G
Sbjct: 454 MKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGD 513
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNI 323
+EA +F+++Q G +PDV+ Y+ L+E + +++ M GC P+ +YNI
Sbjct: 514 LDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNI 573
Query: 324 MVDAYGRAG 332
++D R G
Sbjct: 574 LLDCLERRG 582
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 43/258 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL------------------------- 159
+IEA G+ + K F ++++S C P + TY+L
Sbjct: 297 VIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYL 356
Query: 160 -------LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
L+K+ C SG +A VF M + S ++ L G +A+++
Sbjct: 357 NKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLL 416
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M Y ++ + GK + LF++M++ P++ TY +++++ R
Sbjct: 417 HMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRV 476
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASY 321
GL ++A +FE+++ + +PDV YN L+ EA+ L M G +PD +Y
Sbjct: 477 GLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTY 536
Query: 322 NIMVDAYGRAGLHEGKCS 339
+ +++ +G++ + CS
Sbjct: 537 STLIECFGKSNKVDMACS 554
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +++A+ S + K V+ EM + G YN +D L K G +A ++F+ M
Sbjct: 188 TYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDM 247
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C P TYT++I + GK +++ L F+EM S C N+ Y ++ A + +
Sbjct: 248 KQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMV 307
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ + ++ + +P+ + Y+ ++ ++H
Sbjct: 308 DKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLH 343
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I +YG+ L KA + E+ S C P TY L+ +G L++A +F+EM++
Sbjct: 468 IMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEK 527
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y++ I+ K A +F M + C P+ TY ++++ + K+ A
Sbjct: 528 GYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEA 587
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
K + M+ P+ TY+ L
Sbjct: 588 HKHYETMKQQGLTPDSITYSIL 609
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 43/253 (16%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + +A + ++ C+P TY +L++ +G K + F EM
Sbjct: 226 MLLDALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSR 285
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG-------- 235
G + + YN+ I+ L K K + + +M CQP+ TY+L +++
Sbjct: 286 GCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRL 345
Query: 236 ------------KASKSFMALKLFNEMRSHKCKPNIC------------TYTALVNAFAR 271
K+ S++ L + + C + +++
Sbjct: 346 NEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCN 405
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRAS 320
G EA ++ + GI+ D+ YN + A L +M G PD +
Sbjct: 406 SGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFT 465
Query: 321 YNIMVDAYGRAGL 333
YNIM+ +YGR GL
Sbjct: 466 YNIMISSYGRVGL 478
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+K+GL + Y + L+ K E+++ M R + Y ++++ KA
Sbjct: 178 KKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMV 237
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A ++F +M+ C P+ TYT L+ + G + F+++ G ++ AYN +
Sbjct: 238 DQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTV 297
Query: 301 MEA-----------YRLISRMHMGCEPDRASYNIMVDAYGRAG-LH 334
+EA + L + C+P++ +Y++ +D G LH
Sbjct: 298 IEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLH 343
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A + E+ + P TY+ L++ + S ++ A ++F EM G
Sbjct: 504 LINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEG 563
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P+ V YN +D L + G +A + ++ MK+ P + TY+++ L ++ ++
Sbjct: 564 CIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLTPDSITYSILERLESRSQRT 619
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + + +KA+ + +++ P+ ++++L+ +C GL+ +A ++ EM++ G
Sbjct: 510 LMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 569
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V N+ I G L+ GN KA + M + P TY +IN + K A
Sbjct: 570 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 629
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L N M PN+ TY A++ F+R G +EAE + ++ GI PD Y +L+ Y
Sbjct: 630 FLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGY 689
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++ +++A+ E+L P T+ +L C + +AE VF EM + G
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRG 359
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + ++S + + G +A+ F++MK P T YT++IN Y + AL
Sbjct: 360 VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGAL 419
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+ NEM C ++ TY L+N R + ++A+E+F+++ G+ PD Y L+ Y
Sbjct: 420 KMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGY 479
Query: 305 ----------RLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
L M + +PD +YN ++D + + G E
Sbjct: 480 CKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME 521
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + E+++ P T L+ YC G + KA ++F M L P V YN+ +D
Sbjct: 453 ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G +KA E++ M PS +++++IN + A +L++EM+ KP
Sbjct: 513 GFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP 572
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLI 307
+ T ++ + R G +A + + G+ PD YN L+ A+ LI
Sbjct: 573 TLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLI 632
Query: 308 SRM-HMGCEPDRASYNIMVDAYGRAG 332
+ M G P+ +YN ++ + R G
Sbjct: 633 NNMEERGLLPNLVTYNAILGGFSRHG 658
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ C+ TY LL C +L+ A+ +F+EM + G+ P + I G K G
Sbjct: 424 EMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDG 483
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N KA+ +F+ M +P TY +++ + K + A +L+ +M S + P+ +++
Sbjct: 484 NMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFS 543
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHM 312
L+N F GL EA ++++++ GI+P + N +++ Y L + +
Sbjct: 544 ILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISE 603
Query: 313 GCEPDRASYNIMVDAY 328
G PD +YN +++++
Sbjct: 604 GVPPDCITYNTLINSF 619
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ AYC GL+ +A + M GL P YN+ I+GL K G+ ++A + M
Sbjct: 261 TYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T+ M+ + + A ++FNEM P++ +++++V F+R G
Sbjct: 321 LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGEL 380
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHM---GCEPDRASYNIM 324
A FE+++G G+ PD Y L+ Y L R M GC D +YN +
Sbjct: 381 GRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTL 440
Query: 325 VDAYGRAGL 333
++ R +
Sbjct: 441 LNGLCRGKM 449
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI Y + KA + E + R + P TY L+ +C G +EKA+ ++ +M
Sbjct: 475 LIHGYCKDGNMTKA-LSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR 533
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ PS + ++ I+G G +A ++ MK +P+ T +I Y +A A
Sbjct: 534 EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKA 593
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
N M S P+ TY L+N+F +E + A + ++ G+ P++ YNA++
Sbjct: 594 NDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGG 653
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAY 328
+ RM G PD+++Y +++ Y
Sbjct: 654 FSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGY 689
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ LL++ Y + L + F+ +RK G S N+ + ++K G A ++++
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + T +M+N K K +EM ++ TY LVNA+ R GL
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIM 324
EA + + + G G++P ++ YNAL+ A R++ M +G P+ A++N M
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335
Query: 325 V 325
+
Sbjct: 336 L 336
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
Y + + S I T +++ A C G L+ EM + G+ V YN+ ++
Sbjct: 211 VYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYC 270
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G +A + M +P TY +IN K A ++ +EM PN
Sbjct: 271 RRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM 310
T+ ++ R+ EAE +F ++ G+ PD+ ++++++ A +M
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390
Query: 311 H-MGCEPDRASYNIMVDAYGR 330
+G PD Y I+++ Y R
Sbjct: 391 KGVGLVPDTVIYTILINGYCR 411
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 61 VLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATW--DDLINVSV---------QLRLN 109
++PT Q + +Q E D FDS +A DL S+ Q RL
Sbjct: 41 TVTPTHVQ--QLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLA 98
Query: 110 K------KWDPIVLMSCVSILLIEAYGQKSLHKKAEF--TYLELLDSRCIPTEDTYALLL 161
+ K + I + + + + AYG+ +HK + + ++ D C PTE +Y +L
Sbjct: 99 ETLLDRMKEEKIDVTEDILLSICRAYGR--IHKPLDSIRVFHKMQDFHCKPTEKSYISVL 156
Query: 162 KAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG-GNPQKAVEIFQRMKRDCC 220
L+ A +R+MRK G+PP+ N I K G KA+ +F+ M C
Sbjct: 157 AILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGC 216
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+P + TY +IN + A +L EM + C P++ TYT++++ + +EA
Sbjct: 217 EPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMR 276
Query: 281 IFEQLQGAGIEPDVYAYNALMEAY 304
+ E ++ IEP+V+ Y++LM+ +
Sbjct: 277 LLEDMKDKNIEPNVFTYSSLMDGF 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 124 LLIEAYGQKS-LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
+LI+A+ + S KA + + + C P TY L+ C + +A+ + +EM
Sbjct: 189 VLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMET 248
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G PS V Y S I GL + N +A+ + + MK +P+ TY+ +++ + K S
Sbjct: 249 KGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSR 308
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A + M + +PN+ +Y+ L+N EG EA EIF++++ G +PD Y ++
Sbjct: 309 ARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVN 368
Query: 302 ---------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYS 341
EA + M + G +P+R ++++ V + R +H G C+ +
Sbjct: 369 CLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRV-IH-GLCTIN 416
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G ++ I L+ + A + RMK + + + + YG+ K +
Sbjct: 74 GFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDS 133
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+++F++M+ CKP +Y +++ E + A + ++ GI P V + N L++A
Sbjct: 134 IRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKA 193
Query: 304 Y-----RLISRMHM-------GCEPDRASYNIMVDAYGR 330
+ + MH+ GCEPD +Y +++ R
Sbjct: 194 FCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCR 232
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 17/223 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G ++A ++ D+ P T+ ++L AY KA + F M+
Sbjct: 106 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTN 165
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFM 242
+ P N I L+K +A+EIF M KR C+P T+T +I+LY +
Sbjct: 166 IRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIED 225
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+F+ M + KPNI +Y AL++A+A G+ +EA +F++++ +G PDV +Y +L+
Sbjct: 226 CKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLIS 285
Query: 302 ------------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
E + ++ R C+P+ SYN ++DAYG G
Sbjct: 286 TFGRSQQPARAREVFDMMKRNK--CKPNLVSYNALMDAYGSNG 326
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F+ + S C P T+ ++ Y + G +E +AVF M G+ P+ V YN+ I
Sbjct: 193 FSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAY 252
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
G ++A +F MKR P +YT +I+ +G++ + A ++F+ M+ +KCKPN+
Sbjct: 253 ASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNL 312
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+Y AL++A+ G +A +I +++ GI P+V + L+ A
Sbjct: 313 VSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAA 356
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 116/256 (45%), Gaps = 48/256 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +A + E+ RC P +TY L+ A+ +G A + +M +
Sbjct: 35 MMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDMLRA 94
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEI-------------------------------- 211
+PPS +N+ I+ GN ++A+ +
Sbjct: 95 AIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKA 154
Query: 212 ---FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICTYTALV 266
F+ MK +P T T ++I+ K + A+++F+ MR + C+P++ T+T+++
Sbjct: 155 LSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSII 214
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCE 315
+ ++ G E+ + +F + GI+P++ +YNAL+ EA+ + M G
Sbjct: 215 HLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFC 274
Query: 316 PDRASYNIMVDAYGRA 331
PD SY ++ +GR+
Sbjct: 275 PDVVSYTSLISTFGRS 290
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + + + +L P +Y L+ AY G+ ++A +VF EM++ G
Sbjct: 213 IIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSG 272
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S I + P +A E+F MKR+ C+P+ +Y +++ YG A+
Sbjct: 273 FCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAV 332
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM PN+ + L+ A R G + + + GI + A N+ + +Y
Sbjct: 333 DILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSY 392
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLHE 335
I S + +PD ++ I++ R +E
Sbjct: 393 MNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYE 434
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +G+ +A + + ++C P +Y L+ AY +G L +A + REM + G
Sbjct: 283 LISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDG 342
Query: 185 LPPSAVVY-----------------------------------NSYIDGLLKGGNPQKAV 209
+ P+ V NS I + G +KA+
Sbjct: 343 IHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAI 402
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+++ M+ +P + T+T++I+ + SK AL F EM + + Y++++ A+
Sbjct: 403 NLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAY 462
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+++G +AE +F L+G+G PD+ Y A++ AY
Sbjct: 463 SKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAY 497
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 114 PIVLMSCVSILLIEAYGQK----SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
P V+ C + +GQK S+ AE + L C +Y + G
Sbjct: 345 PNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNI-------GE 397
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
EKA ++R M P +V + I G + ++A+ F+ M S+E Y+
Sbjct: 398 YEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSS 457
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI Y K + A LFN ++ C P++ TYTA++NA++ + E+ ++++++
Sbjct: 458 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANN 517
Query: 290 IEPDVYAYNALMEAY 304
I+ D A +ALM+A+
Sbjct: 518 IQLDSIACSALMKAF 532
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 199 LLKGGNPQKAVEIFQRMK--RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
L + G+ + V++F MK R+ C + Y +MI L+ + ++ A LF EM+ +CK
Sbjct: 4 LTQIGSIEHCVQVFDWMKNQRNYC-ARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCK 62
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P++ TY AL+NA R G A I E + A I P +N L+ EA R+
Sbjct: 63 PDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRV 122
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+M G PD ++NI++ AY + SY
Sbjct: 123 CKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSY 157
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 14/201 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++++ + +++A +F EM+K+ P YN+ I+ + G + A I +
Sbjct: 31 DIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMED 90
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R PS T+ +IN G AL++ +M + P++ T+ +++A+
Sbjct: 91 MLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQ 150
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM---HMGCEPDRASY 321
+A FE ++G I PD N ++ +A + S M C PD ++
Sbjct: 151 YSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTF 210
Query: 322 NIMVDAYG-RAGLHEGKCSYS 341
++ Y R + + K +S
Sbjct: 211 TSIIHLYSVRGQIEDCKAVFS 231
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I +Y ++KA Y + + P T+ +L+ C E+A F+EM +
Sbjct: 389 IGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRI 448
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P S+ +Y+S I K G KA +F +K C P TYT MIN Y +
Sbjct: 449 PLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCA 508
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
L+ EM ++ + + +AL+ AF + + E ++ GI
Sbjct: 509 LYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGI 553
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY ++ KAE + L S C P TY ++ AY S + EK A+++EM
Sbjct: 458 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANN 517
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--------------------------- 217
+ ++ ++ + KG + + + MK
Sbjct: 518 IQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKAT 577
Query: 218 ---DCCQPSTETYTL-----MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ +PS +L ++ GK+ K+ + +KLF + NI TY+ L+
Sbjct: 578 DLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNL 637
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + E+ + + AGI+P YN ++
Sbjct: 638 LSAGKWRKYIEVLQWMNDAGIQPSHAMYNNIL 669
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + S +++A + E+LD R + + Y+ ++ AY G L KAE++F ++
Sbjct: 422 ILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGS 481
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y + I+ +K ++Q M+ + Q + + ++ + K +++
Sbjct: 482 GCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNV 541
Query: 244 LKLFNEMRSHKCKPNICTYTALVNA 268
L L M+ N + +++A
Sbjct: 542 LILAEIMKEKGIPFNDANFFEMLSA 566
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KAE L++S + T Y L+ YC G LE A ++F++M+ + P + YN+ I
Sbjct: 346 KAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL K +A ++ M+++ PS ET+ +I+ YG+A + + ++M+ K
Sbjct: 406 NGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLK 465
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
PN+ +Y ++VNAF + G EA I + + + P YNA+++AY L
Sbjct: 466 PNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFML 525
Query: 307 ISRM-HMGCEPDRASYNIMV 325
+M G P +YN+++
Sbjct: 526 AEKMKSSGVPPSIVTYNLLI 545
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A +E+ + P+ +T+ L+ AY +G LEK + +M++ G
Sbjct: 404 LINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKG 463
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y S ++ K G +AV I M P + Y +I+ Y + + A
Sbjct: 464 LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAF 523
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
L +M+S P+I TY L+ ++ EAEE+ + L+ G+ PDV +YN L+ A
Sbjct: 524 MLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISAC 583
Query: 304 -YRLISRMHM---------GCEPDRASYNIMVDAYGRAG-LHE 335
YR + + G +P +Y ++ + G AG +HE
Sbjct: 584 CYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHE 626
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++LL C G + KAE V + + GL + V+YN+ I+G + G+ + A IFQ+M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P TY +IN GK + A L EM + P++ T+ L++A+ R G
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRMHM-GCEPDRASYNIM 324
E+ I +Q G++P+V +Y + ++EA ++ M + P YN +
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509
Query: 325 VDAYGRAG 332
+DAY G
Sbjct: 510 IDAYIECG 517
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 91 PTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI--------LLIEAYGQKSLHKKAEFT 141
P H T++ LIN ++ R+ + D ++ M + LI+AYG+ +K
Sbjct: 396 PDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFII 455
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++ + P +Y ++ A+C +G + +A A+ +M + P A VYN+ ID ++
Sbjct: 456 LSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIE 515
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ +A + ++MK PS TY L+I K S+ A +L + +R++ P++ +
Sbjct: 516 CGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVIS 575
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---------- 311
Y L++A + A E+ +++ GI+P Y L + R+H
Sbjct: 576 YNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQML 635
Query: 312 -MGCEPDRASYNIMVDAYGRAG 332
P YNIMVDAY + G
Sbjct: 636 DKDVVPCSGIYNIMVDAYAKCG 657
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +LL C +G + + AV EM + P Y+ DG + G+ Q + +
Sbjct: 256 PNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSL 315
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ + + T ++++N K K A ++ + + Y L+N + +
Sbjct: 316 FEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQ 375
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G E A IF+Q++ I PD YNAL+ EA+ L+ M G P +
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVK 348
+N ++DAYGRAG E KC L ++ K
Sbjct: 436 FNTLIDAYGRAGQLE-KCFIILSDMQEK 462
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P TY++L + +G + ++F E K G+ A + ++GL K G
Sbjct: 283 EMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDG 342
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
KA E+ Q + +T Y +IN Y + A +F +M+S +P+ TY
Sbjct: 343 KISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYN 402
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH-M 312
AL+N + EA ++ +++ G+ P V +N L++AY ++S M
Sbjct: 403 ALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEK 462
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +P+ SY +V+A+ + G
Sbjct: 463 GLKPNVVSYGSIVNAFCKNG 482
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLP-PSAVVYN 193
H + L+ +R P T+ ++A ++G L++A + R M G P P+A YN
Sbjct: 133 HADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYN 192
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
I GL K G AV++F M P+ TY MI+ + K +L+++M H
Sbjct: 193 VVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRH 252
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KPN+ TY L++ R G E + +++ + PD + Y+ L + +
Sbjct: 253 GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGH 303
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+AY + +A ++ S P+ TY LL+K C + +AE + +R YG
Sbjct: 509 IIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + YN+ I N +A+E+ + M + +PS TY ++ + G A +
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEME 628
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
L+ +M P Y +V+A+A+ G + E + +++ GI
Sbjct: 629 NLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDS----RCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
LLI+ ++S +AE ELLDS P +Y L+ A C ++A + +E
Sbjct: 543 LLIKGLCKQSQISEAE----ELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKE 598
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M K G+ PS Y L G + ++Q+M P + Y +M++ Y K +
Sbjct: 599 MWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGE 658
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVN 267
L EM + YT++ N
Sbjct: 659 ESKVEALRKEMSDKGIA--VGDYTSMTN 684
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 13/204 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
KKA+ + + P TY +L+ +C + ++++A +F+EM + + P V Y+S
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPS-TETYTLMINLYGKASKSFMALKLFNEMRSHK 254
IDGL K G ++ M RD QP+ TY+ +I+ K A+ LFN+M+ +
Sbjct: 381 IDGLCKSGRIPYVWDLIDEM-RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
+PNI T+T L++ + G ++A+E+F+ L G +VY YN ++ EA
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499
Query: 305 RLISRMH-MGCEPDRASYNIMVDA 327
++S+M GC P+ ++ ++ A
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIA 523
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + + +A + E+ +P TY+ L+ C SG + + EMR
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDR 403
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + Y+S IDGL K G+ +A+ +F +MK +P+ T+T++++ K + A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F ++ + N+ TY ++N ++GL EEA + +++ G P+ + + ++ A
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
N+ F S PP+ DD ++ ++ + PI+ + + ++++ K H
Sbjct: 24 NSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKI----LDSFA-KMKHYSTA 78
Query: 140 FTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+ L+ + I P T +L+ +C G + +V ++ K G PP V N+ I G
Sbjct: 79 VSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKG 138
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L G +KA+ ++ Q + +Y +IN K + A+KL ++ KPN
Sbjct: 139 LCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN 198
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
+ Y+ +++A + L EA +F ++ GI DV Y+ L+ EA L++
Sbjct: 199 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258
Query: 309 RMHM-GCEPDRASYNIMVDAYGRAG 332
M + P+ +YNI+VDA + G
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEG 283
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ +C+ G L++A + EM + P+ YN +D L K G ++A + M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C +P TY+ +++ Y + A +FN M P++ TYT L+N F + +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGCEP-DRASYNIM 324
+EA +F+++ + P + Y++L++ + LI M +P D +Y+ +
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSL 415
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 416 IDGLCKNG 423
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ A C G +++A++V M K + P + Y++ +DG +KA +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P TYT++IN + K AL LF EM P I TY++L++ +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRAS 320
G ++ ++++ G DV Y++L++ A L ++M P+ +
Sbjct: 387 SGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 321 YNIMVDAYGRAG 332
+ I++D + G
Sbjct: 447 FTILLDGLCKGG 458
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ K KKA + +LL + +YA L+ C G A + R++
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 194
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ +Y++ ID L K +A +F M TY+ +I + K A+
Sbjct: 195 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L NEM PN+ TY LV+A +EG +EA+ + + A ++PDV Y+ LM+ Y
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAY 328
L+ + MG PD +Y I+++ +
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T L+K C+ G ++KA ++ G + V Y + I+G+ K G+ + A+++
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 186
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++ +P+ E Y+ +I+ K A LF+EM ++ TY+ L+ F
Sbjct: 187 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC-EPDRAS 320
EG +EA + ++ I P+VY YN L+ EA +++ M C +PD +
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 321 YNIMVDAY 328
Y+ ++D Y
Sbjct: 307 YSTLMDGY 314
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L+ C +G L++A A+F +M+ + P+ + +DGL KGG + A E+FQ +
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ TY +MIN + K AL + ++M + C PN T+ ++ A ++
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530
Query: 276 EEAEEIFEQLQGAGI 290
++AE++ Q+ G+
Sbjct: 531 DKAEKLLRQMIARGL 545
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D P T+ +LL C G L+ A+ VF+++ G + YN I+G K G +
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+A+ + +M+ + C P+ T+ +I K ++ A KL +M
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y L+ PT TY LL +G +E AE +F EM +YG + +YN ++G
Sbjct: 973 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 1032
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN +K +FQ M P ++YT++I+ KA + L F ++ +P++ T
Sbjct: 1033 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1092
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-M 310
Y L++ + EEA +F ++Q GI P++Y YN+L+ EA ++ +
Sbjct: 1093 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1152
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G +P+ +YN ++ Y +G
Sbjct: 1153 TKGWKPNVFTYNALIRGYSVSG 1174
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + E+ + C P E TY LLL A S +E+ V EM + G + V YN+ I
Sbjct: 899 AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 958
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL+K ++A++++ + P+ TY +++ KA + A LFNEM + CK
Sbjct: 959 GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 1018
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------Y 304
N Y L+N G E+ +F+ + GI PD+ +Y +++ +
Sbjct: 1019 NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 1078
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRA 331
R + + MG EPD +YN+++D G++
Sbjct: 1079 RQL--LEMGLEPDLITYNLLIDGLGKS 1103
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + E+L+ C Y +LL + ++G EK +F++M G+ P Y ID
Sbjct: 1004 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 1063
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
L K G + F+++ +P TY L+I+ GK+ + A+ LFNEM+ P
Sbjct: 1064 TLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVP 1123
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
N+ TY +L+ + G EA +++E+L G +P+V+ YNAL+ Y +
Sbjct: 1124 NLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1172
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A C G + +A +F EM++ G+ P YNS I G LK A+E+F+ M
Sbjct: 463 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 522
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ T+ L IN YGK+ +S A++ + M+S P++ A++ A+ G
Sbjct: 523 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 582
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A+ +F +L+ G+ PD Y ++ EA ++ M C PD + N ++
Sbjct: 583 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 642
Query: 326 DAYGRAG 332
D +AG
Sbjct: 643 DTLYKAG 649
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L + Y SG KA + M+ G+ P V N+ + GL K G A +
Sbjct: 528 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 587
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K P T TYT+MI KASK A+K+F +M + C P++ +L++ +
Sbjct: 588 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYK 647
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G +EA IF QL+ +EP YN L+ E L+ M H P+ +
Sbjct: 648 AGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLIT 707
Query: 321 YNIMVDAYGRAG 332
YN ++D + G
Sbjct: 708 YNTILDCLCKNG 719
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 32/306 (10%)
Query: 54 FVDGIFPVLSPTAQQILRFVQREVDSNTIW-----DAFDSLPPTHA------------TW 96
VDG+ P + + ++ F +R +W +A P ++ +
Sbjct: 312 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 371
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
D+ + ++ N+ P V+ V I ++ G+ S A+ + ++ S P T
Sbjct: 372 DEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGRIS---DAKDVFWKMKKSDQKPDRVT 427
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL + +G + ++ M+ G + V Y + ID L + G +A+E+F MK
Sbjct: 428 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMK 487
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P +Y +I+ + KA + AL+LF M H KPN T+ +N + + G
Sbjct: 488 QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESI 547
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMV 325
+A + +E ++ GI PDV A NA++ A R+ + MG PD +Y +M+
Sbjct: 548 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 607
Query: 326 DAYGRA 331
+A
Sbjct: 608 KCCSKA 613
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 109/222 (49%), Gaps = 12/222 (5%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
S+L++ A+G++ + + E+ P +Y + ++ + ++A + +M
Sbjct: 324 SVLMV-AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 382
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P + + I L G A ++F +MK+ +P TY +++ +G S
Sbjct: 383 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 442
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
++++N M++ N+ YTA+++A + G EA E+F++++ GI P+ Y+YN+L+
Sbjct: 443 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 502
Query: 302 EAYRLISRM--------HM---GCEPDRASYNIMVDAYGRAG 332
+ R HM G +P+ ++ + ++ YG++G
Sbjct: 503 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 544
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++D P +Y +++ C +G L FR++ + GL P + YN IDGL K
Sbjct: 1043 FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1102
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++AV +F M++ P+ TY +I GKA K+ A K++ E+ + KPN+ T
Sbjct: 1103 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1162
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
Y AL+ ++ G + A + ++ G P+
Sbjct: 1163 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+A + + G L A M++ G+ +A YN + L+K G ++A+E+++ M
Sbjct: 252 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 311
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D PS TY++++ +GK L L EM +H KPN+ +YT + +
Sbjct: 312 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 371
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
+EA I +++ G +PDV + L++ R+ + PDR +Y +
Sbjct: 372 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 431
Query: 325 VDAYGRAG 332
+D +G G
Sbjct: 432 LDKFGDNG 439
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ I GQ +A ++ + C P T+ +L++ C +G + A+ VF +M+K
Sbjct: 360 ICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS 419
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P V Y + +D G+ Q +EI+ MK D + YT +I+ + + F A
Sbjct: 420 DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEA 479
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA------- 296
L++F+EM+ P +Y +L++ F + +A E+F+ + G +P+ Y
Sbjct: 480 LEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINY 539
Query: 297 YNALMEAYRLISRMHM----GCEPDRASYNIMVDAYGRAG 332
Y E+ + I R + G PD + N ++ ++G
Sbjct: 540 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 579
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L I YG+ KA Y EL+ S+ I P +L SG L A+ VF E++
Sbjct: 534 VLFINYYGKSGESIKAIQRY-ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 592
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P + Y I K +AV+IF M + C P +I+ KA +
Sbjct: 593 AMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGD 652
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +++ +P TY L+ REG +E + E++ + P++ YN ++
Sbjct: 653 EAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTIL 712
Query: 302 EAY-----------RLISRMHMGCEPDRASYNIMV 325
+ L S GC PD +SYN ++
Sbjct: 713 DCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVI 747
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+ ++A Y ++ +P+ TY++L+ A+ +E + REM +G+ P+
Sbjct: 297 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 356
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y I L + +A I +M+ + C+P T+T++I + A + A +F +M
Sbjct: 357 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 416
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+ KP+ TY L++ F G + EI+ ++ G +V AY A+++A + R+
Sbjct: 417 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 476
Query: 311 -----------HMGCEPDRASYNIMVDAYGRA 331
G P++ SYN ++ + +A
Sbjct: 477 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 508
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
L++ AE +F EM++ G P YN +D + K ++ +++ + M R + + TY
Sbjct: 895 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYN 954
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ K+ + A+ L+ + S P CTY L++ + G E+AE +F ++
Sbjct: 955 TIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEY 1014
Query: 289 GIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAG-LHEG 336
G + + YN L+ +R+ + G PD SY I++D +AG L++G
Sbjct: 1015 GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 1074
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + S +A + +++++ C+P L+ +G ++A +F ++++
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 664
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN+ + GL + G ++ + + + M P+ TY +++ K A
Sbjct: 665 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 724
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA---------GIEPDV 294
L + M + C P++ +Y ++ +E EA IF Q++ I P
Sbjct: 725 LDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSF 784
Query: 295 YAYNALMEAYRLISR--MHMGCEPDRAS-YNIMVDAYGRAGLHE 335
+ EA +I + G + DR+S +++M +AG+ +
Sbjct: 785 VKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 828
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 140 FTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
TY +LL+ P TY LL+ S LE+A ++F EM+K G+ P+ YNS I
Sbjct: 1075 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILH 1134
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K G +A ++++ + +P+ TY +I Y + + A + M C PN
Sbjct: 1135 LGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I L P +A+E F+ R +T + M+ L + ++F+ M+
Sbjct: 186 IHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQI 245
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------M 301
K N+ T+ A+ EG A ++ AGI + Y YN L +
Sbjct: 246 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 305
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
E YR++ M G P +Y++++ A+G+
Sbjct: 306 EVYRVM--MVDGVVPSVRTYSVLMVAFGK 332
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN +T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT +I+ +S A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAE 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRJAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P + L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ EG +AE++ ++ G++PD Y +
Sbjct: 334 DXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C + A +F EM GL P+ V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTT 322
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ D Y AL+ +A +++ M +G
Sbjct: 323 LIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVG 382
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 383 LKPDARTYTMIINEFCKKG 401
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A L M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGHLETAFEY 333
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D C+P TY ++ YC +G +E A AV+ +M G P+ V YN I+G K GN
Sbjct: 298 DGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMG 357
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
AV ++Q+M C P T++ +I+ Y + + A+K++ EM + +PN T+ ++
Sbjct: 358 SAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIII 417
Query: 267 NAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALMEA-----------YRLISRMHMGC 314
+ F ++ EA +++ I P + YN +++ LI GC
Sbjct: 418 HTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGC 477
Query: 315 EPDRASYNIMVDAYGRAG 332
PD+ +Y I++ + G
Sbjct: 478 RPDKYTYTILIIGHCMKG 495
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P ++ +++K C G ++KA + M ++G P V +N ++GL + K E+
Sbjct: 232 PDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREV 291
Query: 212 FQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+R++RD C P+ TYT +I+ Y KA + A+ ++N+M + PN+ TY L+N +
Sbjct: 292 LRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYG 351
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ G A +++Q+ PDV +++L++ Y
Sbjct: 352 KAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGY 385
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGL-PPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
Y L+ + G ++ A A+F + G+ P +N I G+ K G+ QKA+E+ +R
Sbjct: 200 AYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVER 259
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREG 273
M C P T T+ +++N +A + ++ + R C PN+ TYT++++ + + G
Sbjct: 260 MDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAG 319
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRASYN 322
E+A ++ + G P+V YN L+ Y M C PD +++
Sbjct: 320 RMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFS 379
Query: 323 IMVDAYGRAG 332
++D Y R G
Sbjct: 380 SLIDGYCRCG 389
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + A Y +++ P TY +L+ Y +G + A AV+++M
Sbjct: 311 VISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRR 370
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V ++S IDG + G A++I+ M + QP+ T+ ++I+ + K ++S AL
Sbjct: 371 CLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEAL 430
Query: 245 KLFNEMRSHK-CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+M P Y +++ + G +EA I +++ G PD Y Y L+
Sbjct: 431 HFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIG 490
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
EA +M GC PD N + ++G+
Sbjct: 491 HCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGM 531
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+ A Y +++ RC+P T++ L+ YC G L+ A ++ EM +Y
Sbjct: 345 VLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQY 404
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK-RDCCQPSTETYTLMINLYGKASKSFM 242
+ P+A + I K +A+ ++M R P Y +I++ K K
Sbjct: 405 HIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDE 464
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A + EM C+P+ TYT L+ +G EA F ++ G PD N+ +
Sbjct: 465 ANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFIS 524
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR-MKRDCCQPSTETYTLMINLYGKASKS 240
++G A YN +D + G Q AV +F+ ++ P ++ ++I K
Sbjct: 191 QFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDV 250
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI-EPDVYAYNA 299
AL+L M C P+ T+ LVN R + E+ +LQ G+ P+V Y +
Sbjct: 251 QKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTS 310
Query: 300 LMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
++ Y RM +G P+ +YN++++ YG+AG
Sbjct: 311 VISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAG 354
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 149 RCIPTEDTYALLLK-AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
R P++ A L+ A C S L A+ + +PPSA Y I + + G
Sbjct: 86 RLAPSQAAAAAALRHAPCASSTLHLFSALHSPHSQLAMPPSAHSYRYVISLMCQSGRHTD 145
Query: 208 AVEIFQRMKRDCCQ-PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
A+++F +M P+ + + A A L ++ C Y L+
Sbjct: 146 ALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYAYNKLM 205
Query: 267 NAFAREGLCEEAEEIFEQ-LQGAGIEPDVYAYNALM----------EAYRLISRM-HMGC 314
+ F G ++A +FE +QG PDV+++N ++ +A L+ RM GC
Sbjct: 206 DLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGC 265
Query: 315 EPDRASYNIMVDAYGRA 331
PD ++NI+V+ RA
Sbjct: 266 SPDTVTHNILVNGLCRA 282
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A +E+ + C P + TY +L+ +CM G + +A F +M + G P ++V NS+I
Sbjct: 464 EANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFI 523
Query: 197 DGLLKGGNPQKAVEIFQ 213
LLK G P + I +
Sbjct: 524 SCLLKSGMPGEVDHIMR 540
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + E+ P +Y L+ YC GLL A + M K G+PP V +N+ +
Sbjct: 256 KANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLV 315
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+G K G Q+A ++F MK P+T TY ++IN Y KA M +LF EM + K
Sbjct: 316 NGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVK 375
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+I TY AL+ +EG ++A + +L G+ P+ ++AL+
Sbjct: 376 ADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ SR P T L++ A C G L+KA VF EM G P+ YN+ I G
Sbjct: 226 YREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCN 285
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G A+++ M+++ P T+ ++N + K K A KLF EM+ P T
Sbjct: 286 KGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVT 345
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
Y L+N +++ G CE +FE++ ++ D+ YNAL+
Sbjct: 346 YNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALI 385
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C + + LL K + A F M+ YG P+ N+Y+ LL A+
Sbjct: 164 CDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIAL 223
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ M+R P++ T L+I K + A +F EM + PN+ +Y L+ +
Sbjct: 224 AFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGY 283
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
+GL A ++ ++ G+ PDV +N L+ EA +L M M P
Sbjct: 284 CNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTT 343
Query: 319 ASYNIMVDAYGRAG 332
+YNI+++ Y +AG
Sbjct: 344 VTYNILINGYSKAG 357
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 12/236 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL + + + A T+ + D +PT ++ L + + A A +REMR+
Sbjct: 173 LLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRS 232
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P++ N I K G KA +F+ M P+ +Y +I Y A
Sbjct: 233 RIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSA 292
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+KL + M + P++ T+ LVN F + G +EA ++F +++G + P YN L+
Sbjct: 293 MKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILING 352
Query: 304 YRLISRMHMG-----------CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
Y MG + D +YN ++ + G K +Y + EL K
Sbjct: 353 YSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEG-KTKKAAYLVRELDEK 407
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY +L+ Y +G E +F EM ++ + + YN+ I GL K G +KA +
Sbjct: 341 PTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYL 400
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKA--SKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + P+ T++ +I YG+ +S A +++ M P T+ L++ F
Sbjct: 401 VRELDEKGLVPNASTFSALI--YGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTF 458
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDV 294
+ A ++ E++ PDV
Sbjct: 459 CENEDYDGAVQLLEEMLNRHKAPDV 483
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C G +KA + RE+ + GL P+A +++ I G ++A +I++ M
Sbjct: 380 TYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSM 439
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG-- 273
+ P +T+ ++++ + + A++L EM + P++ L + G
Sbjct: 440 IKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKV 499
Query: 274 -----LCEEAE------EIFEQLQGAGIEPD 293
LC E E E F++L+ G+ PD
Sbjct: 500 KTAMMLCSELEAQRLLPEGFDKLKAFGLLPD 530
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A +VF + K+GL PS V +N+ ++G ++ G+ + + M
Sbjct: 143 FNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 202
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 262
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A E+++Q+ + PD+ YN L+ +A LI M M G +PD+ SY ++
Sbjct: 263 LAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLI 322
Query: 326 DAYGRAG 332
D + G
Sbjct: 323 DGCCKEG 329
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A+ + EMR G
Sbjct: 251 LIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKG 310
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ + A E +RM ++ + YT +I+ + +S A
Sbjct: 311 LKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAE 370
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S +P+ TYT ++N F ++G ++ +++Q G P V YN LM
Sbjct: 371 KMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+E+
Sbjct: 208 PDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEV 267
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K A L +EMR KP+ +YT L++ +
Sbjct: 268 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCK 327
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRAS 320
EG E A E +++ I D AY AL ++A +++ M +G PD +
Sbjct: 328 EGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGT 387
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 388 YTMIINEFCKKG 399
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI ++S A + E+LD +P T+ L+ +C +G ++ A V+++M
Sbjct: 215 VLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQ 274
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P + YN+ I GL K G+ ++A ++ M+ +P +YT +I+ K A
Sbjct: 275 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETA 334
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ M + + YTAL++ +EG +AE++ ++ G+ PD Y ++
Sbjct: 335 FEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINE 394
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDA 327
+ +L+ M G P +YN++++
Sbjct: 395 FCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A V +EM
Sbjct: 347 LLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGD 406
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ V++ + G G QK ++ + MK +P + Y ++I+ +GK + A+
Sbjct: 407 VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 466
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+ M S +P+ T+ L++ + G AEE+FE ++ G P YN ++ +Y
Sbjct: 467 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 526
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
RL+ +M G P+ ++ +VD YG++G
Sbjct: 527 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 565
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +++ + L+ A F M G+ P V +N+ ID K G A E+
Sbjct: 444 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 503
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R C P TY +MIN YG + +L +M+S PN+ T+T LV+ + +
Sbjct: 504 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 563
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM---------GCEPDRAS 320
G +A E E+++ G++P YNAL+ AY R +S + G +P +
Sbjct: 564 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 623
Query: 321 YNIMVDAYG 329
N +++A+G
Sbjct: 624 LNSLINAFG 632
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ VSI+ A ++L +A F EL S P Y LLK Y +G L+ AE +
Sbjct: 308 TLVSIISALANSGRTLEAEALFE--ELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVS 365
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---G 235
EM K G+ P Y+ ID + G + A + + M+ QP++ ++ ++ Y G
Sbjct: 366 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRG 425
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+ K+F LK EM+S KP+ Y +++ F + + A F+++ GIEPD
Sbjct: 426 EWQKTFQVLK---EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 482
Query: 296 AYNALMEAY----RLISRMHM-------GCEPDRASYNIMVDAYG 329
+N L++ + R I M GC P +YNIM+++YG
Sbjct: 483 TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 527
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + H AE + + C+P TY +++ +Y + + + +M+ G
Sbjct: 487 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 546
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V + + +D K G A+E + MK +PS+ Y +IN Y + S A+
Sbjct: 547 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 606
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F M S KP++ +L+NAF + EA + + ++ G++PDV Y LM+A
Sbjct: 607 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 666
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
+ + GC+PDR + +++ A
Sbjct: 667 IRVDKFQKVPGVYEEMIMSGCKPDRKARSMLRSA 700
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 17/193 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++ A SG +AEA+F E+R+ G+ P YN+ + G +K G + A + M
Sbjct: 308 TLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEM 367
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ P TY+L+I+ Y A + A + EM + +PN ++ L+ + G
Sbjct: 368 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEW 427
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
++ ++ ++++ G++PD YN +++ + R++S G EPDR ++
Sbjct: 428 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE---GIEPDRVTW 484
Query: 322 NIMVDAYGRAGLH 334
N ++D + + G H
Sbjct: 485 NTLIDCHCKHGRH 497
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 9/228 (3%)
Query: 87 DSLPPTHATWDDLINVSVQ----LRLNKKWDPIVLMSCVSI-----LLIEAYGQKSLHKK 137
+ + P TW+ LI+ + + + ++ + C+ ++I +YG +
Sbjct: 475 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 534
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+ ++ +P T+ L+ Y SG A EM+ GL PS+ +YN+ I+
Sbjct: 535 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 594
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G ++AV F+ M D +PS +IN +G+ + A + M+ + KP
Sbjct: 595 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 654
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
++ TYT L+ A R ++ ++E++ +G +PD A + L A R
Sbjct: 655 DVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPDRKARSMLRSALR 702
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL + T TY L+ A + +EKA + MR+ G V Y+ I L +
Sbjct: 190 LLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNK 249
Query: 205 PQKAV--EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+ +++ ++RD + + +I + K+ AL+L ++ T
Sbjct: 250 IDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATL 309
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH- 311
++++A A G EAE +FE+L+ +GI+P AYNAL++ Y ++S M
Sbjct: 310 VSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEK 369
Query: 312 MGCEPDRASYNIMVDAYGRAGLHE 335
G PD +Y++++DAY AG E
Sbjct: 370 RGVSPDEHTYSLLIDAYVNAGRWE 393
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 18/227 (7%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
+V+ S I++ + L+K+ E LEL D + + ++ + SG +A
Sbjct: 239 LVIQSLTRCNKIDSVMLQRLYKEIERDKLEL-DVQLVND------IIMGFAKSGDPSRAL 291
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ + GL S I L G +A +F+ +++ +P T+ Y ++ Y
Sbjct: 292 QLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGY 351
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K A + +EM P+ TY+ L++A+ G E A + ++++ ++P+
Sbjct: 352 VKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNS 411
Query: 295 YAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAYGR 330
+ ++ L+ YR L +G +PDR YN+++D +G+
Sbjct: 412 FVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 458
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C G A + R M + P+ + YN+ ID L K +A+ I
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ TY +I+ K S+ L NEM K PN+ +T LV+A +
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
EG+ A ++ + + G+EPDV Y ALM+ + L S M GC P+ S
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356
Query: 321 YNIMVDAY 328
Y+ +++ Y
Sbjct: 357 YSTLINGY 364
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++DS+ +P + L+ A C G++ A V M + G+ P V Y + +DG
Sbjct: 274 EMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRS 333
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++F M R C P+ +Y+ +IN Y K + A+ LF EM + PNI TY
Sbjct: 334 EMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYN 393
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----AYRLISRMHM------- 312
L++ G +A +F ++ +G PD+ Y L++ L M M
Sbjct: 394 TLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGS 453
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD SYNI++D R G
Sbjct: 454 NLAPDIQSYNIVIDGMCRVG 473
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + +S +A+ + ++ C P +Y+ L+ YC ++KA +F EM +
Sbjct: 325 LMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRE 384
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ I GL G + A+ +F M P TY ++++ K A+
Sbjct: 385 LVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAM 444
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ + P+I +Y +++ R G E A ++F L G+ PDV+ Y ++
Sbjct: 445 AMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGR 330
EA +L M+ GC PD +YN++ + R
Sbjct: 505 CLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLR 541
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 135 HKKAEFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
H + + +DS IP++ T A+++ ++C ++ +V ++ K G P +
Sbjct: 89 HYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFT 148
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ I GL G +A+ +F +M + QP+ TY +I+ K S A++L M
Sbjct: 149 TLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK 208
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
C+PN+ TY +++ ++ EA IF ++ GI P+V YN+++
Sbjct: 209 NCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHG 258
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E++ S IP TY +LL C + L++A A+ + + L P YN IDG+ +
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPN 258
G + A ++F + P TYT+MIN L G ++ A KLF EM + C P+
Sbjct: 472 VGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE---ATKLFREMNTDGCSPD 528
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
CTY + F R A ++ +++ G G D ++E
Sbjct: 529 DCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E++ P TY ++ C + + EM + P+ V++ + +D L K
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G A ++ M + +P TYT +++ + S+ A K+F+ M C PN+ +
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---------- 311
Y+ L+N + + ++A +FE++ + P++ YN L+ + R+
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416
Query: 312 -MGCEPDRASYNIMVD 326
G PD +Y I++D
Sbjct: 417 ASGQIPDLVTYRILLD 432
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ C P TY ++ + +A +F EM G+ P+ YNS I GL K
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ + M P+ +T +++ K +A + + M +P++ TYTA
Sbjct: 265 WKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTA 324
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-------CE-- 315
L++ +EA+++F+ + G P+V +Y+ L+ Y I R+ C+
Sbjct: 325 LMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRE 384
Query: 316 --PDRASYNIMVDAYGRAG 332
P+ +YN ++ G
Sbjct: 385 LVPNIVTYNTLIHGLCHVG 403
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 129 YGQKSLHKKAEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
Y K+ H L+ ++ S P +Y +++ C G LE A +F + GL P
Sbjct: 433 YLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHP 492
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
Y I+GL G +A ++F+ M D C P TY L+ + + +++ A++L
Sbjct: 493 DVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLL 552
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
EM + T T +V + +GL + ++I +
Sbjct: 553 QEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEF 590
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 11/159 (6%)
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
++M G+P I+ + ++ + QP T T+T +I
Sbjct: 98 KQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVE 157
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
K AL LF++M +PN TY L++ + G A + + EP+V Y
Sbjct: 158 GKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217
Query: 298 NALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
N ++ EA + S M G P+ ++YN ++
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + ++ M
Sbjct: 145 FNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMH 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L +A + EM G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N ++G + ++ +++Q G P V YN LM
Sbjct: 373 KMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 206 SGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A+EI+++M P TY +I K A L +EM KP+ TYT L++
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLID 325
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEP 316
+EG + A E +++ I D AY AL+ +A +++ M +G +P
Sbjct: 326 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKP 385
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVELSVK-HYPA 352
D +Y ++++ + G GK S L E+ H P+
Sbjct: 386 DTGTYTMIINEVCKKG-DVGKGSKLLKEMQXDGHAPS 421
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 158 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVY 213
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ +A ++ M +P TYT +I+ K
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMI 393
Query: 301 M----------EAYRLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N K G+ + A +F + + +PS +Y ++N Y +
Sbjct: 130 YEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
KL + M + P++ TY+ L+N +E + A E+F+++ G+ P+
Sbjct: 190 LGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVT 249
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 25/266 (9%)
Query: 77 VDSNTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDP--IVLMSCVSILLIEAYGQKSL 134
V N + + F L TH ++ N+ L K ++P I L + + L ++ ++L
Sbjct: 92 VTFNILINCFSQLGHTHFSFSVFANI-----LKKGYEPNAITLTTLIKGLCLKGQIHQAL 146
Query: 135 HKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
H + L L+ C Y L+ C G A + R + + P+ V+YN
Sbjct: 147 HFHDKVVALGFHLNKVC------YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 200
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ ID + K +A +++ M P TY+ +I+ + K A+ LFN+M S
Sbjct: 201 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE 260
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM- 312
+ P++ T++ LV+ F +EG +EA+ + + GI+PDV Y +LM+ Y L+ +++
Sbjct: 261 EINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKA 320
Query: 313 ----------GCEPDRASYNIMVDAY 328
G + SYNIM++ +
Sbjct: 321 KSIFNTMAQGGVTANVQSYNIMINGF 346
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+++L+ +C G +++A+ V M K G+ P V Y S +DG KA I
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + + ++Y +MIN + K K A+ LF EM P++ TY +L++ +
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G A ++ +++ G+ D YN++++A L+++M G +PD +
Sbjct: 384 SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYT 443
Query: 321 YNIMVDAYGRAG 332
Y I++D + G
Sbjct: 444 YTILIDGLCKGG 455
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I++ + L +A Y E++ P TY+ L+ +C+ G L A +F +M
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P ++ +DG K G ++A + M + +P TY +++ Y + A
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+FN M N+ +Y ++N F + +EA +F+++ I PDV YN+L++
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381
Query: 303 --------AYRLISRMH-MGCEPDRASYNIMVDA 327
A +L+ MH G D+ +YN ++DA
Sbjct: 382 CKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y +++ +C +++A +F+EM + P V YNS IDGL K G A+++ M
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
TY +++ K + A+ L +M+ +P++ TYT L++ + G
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRL 457
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIM 324
++A+ IFE L G VY Y +++ + L+S+M GC P+ +Y I+
Sbjct: 458 KDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEII 517
Query: 325 V 325
+
Sbjct: 518 I 518
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ + ++ K+A+ ++ P TY L+ YC+ + KA+++F M +
Sbjct: 271 ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG 330
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + YN I+G K +A+ +F+ M P TY +I+ K+ K A
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYA 390
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LKL +EM + TY ++++A + ++A + +++ GI+PD+Y Y L++
Sbjct: 391 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY L+ C SG + A + EM G+P + YNS +D L K KA+
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ +MK + QP TYT++I+ K + A +F ++ + TYT ++ F
Sbjct: 428 LLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC 487
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
L ++A + +++ G P+ Y ++
Sbjct: 488 DNDLFDKALALLSKMEDNGCIPNAKTYEIII 518
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 134 LHKKAEFTY-LELLD---SRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L K + +Y L+L+D R +P + TY +L A C + ++KA A+ +M+ G+ P
Sbjct: 381 LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440
Query: 189 AVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFN 248
Y IDGL KGG + A IF+ + + TYT+MI + AL L +
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLS 500
Query: 249 EMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+M + C PN TY ++ + + + AE++ ++ G+
Sbjct: 501 KMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/168 (17%), Positives = 65/168 (38%), Gaps = 11/168 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F + P + + L+K Q A+ + + M+ + T+ ++IN + +
Sbjct: 44 FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ + +F + +PN T T L+ +G +A +++ G +
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163
Query: 297 YNALME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
Y L+ A +L+ R+ +P+ YN ++D+ + L
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 211
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGR 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M C P TY +I K A L +EM KP+ TY
Sbjct: 263 VDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXT 322
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY AL+ +A +++ M +G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 383 LKPDDRTYTMIINEFCKKG 401
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L LN+ + +L S V
Sbjct: 158 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L IP T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TY +I+ K
Sbjct: 274 LSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F MR+ G+ P V +N+
Sbjct: 379 QKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTL 438
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A+E+F M+ C T TY +MINL G+ + + EM+
Sbjct: 439 IDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGL 498
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY
Sbjct: 499 VPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALN 558
Query: 306 LISRMHM-GCEPDRASYNIMVDAYG 329
++ M G E N +++A+G
Sbjct: 559 VVKAMRADGLEASTVVLNSLINAFG 583
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A + +EM G
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 357
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G QKA + + M +P Y +MI+ +GK + A+
Sbjct: 358 VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAM 417
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
F+ MR +P++ T+ L++A + G + A E+F++++ + YN ++
Sbjct: 418 DAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLL 477
Query: 302 -EAYR------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
E R +++ M G P+ +Y +VD YGR+G
Sbjct: 478 GEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSG 516
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM
Sbjct: 332 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 391
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A++ F RM+ + +P T+ +I+ + K + A
Sbjct: 392 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA 451
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++LF+EMR C TY ++N E E E + +++ G+ P++ Y L++
Sbjct: 452 IELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDV 511
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
Y R G +P Y+ +V+AY + GL
Sbjct: 512 YGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 552
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + H +A + E+ +S C TY +++ E EA+ EM++ G
Sbjct: 438 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 497
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y + +D + G ++AV+ + MK D +PS Y ++N Y + + AL
Sbjct: 498 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 557
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ MR+ + + +L+NAF + EA + + ++ G+ PDV Y LM+A
Sbjct: 558 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDA 327
+ + + GC PDR + ++ A
Sbjct: 618 IRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSA 651
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI + G +AE +LE L P Y LLK Y G L+ AE V EM +
Sbjct: 262 LISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQC 321
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G+ K+
Sbjct: 322 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKA 381
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM + +P+ Y +++ F + A + F++++ GIEPDV +N L
Sbjct: 382 FAVLR---EMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTL 438
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++A+ L M C +YNIM++ G EG
Sbjct: 439 IDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEG 485
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 84 DAFD-----SLPPTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAY 129
DAFD + P TW+ LI+ +++L + L + ++I
Sbjct: 418 DAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLL 477
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G++ + E E+ + +P TY L+ Y SG ++A M+ GL PS
Sbjct: 478 GEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSP 537
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+Y++ ++ + G A+ + + M+ D + ST +IN +G+ + A +
Sbjct: 538 TMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQF 597
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M+ + +P++ TYT L+ A R E+ I+E++ +G PD A L A R +
Sbjct: 598 MKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKH 657
Query: 310 MHMG 313
M +
Sbjct: 658 MRVA 661
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK---RDCCQPSTETYTLMINLYGK 236
+R++ P Y+ + LL +P +A + + + +P ++ +I+ + +
Sbjct: 174 LREHSFLPDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLISAFAR 233
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVY 295
A AL+L ++ P TAL+++ EAE +F + AG I+P
Sbjct: 234 ARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTR 293
Query: 296 AYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I + G PD A+Y+++VDAY RAG
Sbjct: 294 AYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 341
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + E+L++ P L+ A+ +G ++A VF +M +YG+ PS + +N+ ID
Sbjct: 148 AERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLID 207
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G+ +A ++F R+ + P+ T++ +I+ + + A EMR+ +P
Sbjct: 208 ACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEP 267
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----------YRLI 307
N TY+AL+NA R G A + +++ G GIEP+V + L++A ++L
Sbjct: 268 NRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLF 327
Query: 308 SRM-HMGCEPDRASYNIMVDA 327
M G P+ + + ++DA
Sbjct: 328 KEMRERGTVPNGVTCSALMDA 348
Score = 94.0 bits (232), Expect = 9e-17, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L + PT T++ L+ + AE FREM + G+ P NS I+ K
Sbjct: 117 YEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAK 176
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+P +A+++F +M R PS T+ +I+ G+A A ++F+ + PN T
Sbjct: 177 AGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRT 236
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
++AL+++ A +G +EA ++++ G+EP+ Y+AL+ A++ + M
Sbjct: 237 FSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMF 296
Query: 312 -MGCEPDRASYNIMVDAYGRA 331
G EP+ ++ ++DA G+
Sbjct: 297 GTGIEPNVVTWTTLIDACGKG 317
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 89/177 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A G+ +A + L + P + T++ L+ ++ + G +++A + +EMR G
Sbjct: 205 LIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARG 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y++ I+ + G +A + M +P+ T+T +I+ GK + +
Sbjct: 265 LEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSF 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
KLF EMR PN T +AL++A + + A + E + GIEP Y +L+
Sbjct: 325 KLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLL 381
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+ L+A +G ++ A + M L P+ V +++ I + A F+ M
Sbjct: 99 VFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLEA 158
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
P + +IN + KA ALK+F++M + P++ T+ L++A R G + A
Sbjct: 159 GITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRA 218
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDA 327
++F +L AG+ P+ ++AL+ EA+ + M G EP+R +Y+ +++A
Sbjct: 219 RQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINA 278
Query: 328 YGRAG 332
GRAG
Sbjct: 279 CGRAG 283
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLE-LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK- 182
L++ +GQ A F LE +++ R P +T+ LLL A +G L+KA + R
Sbjct: 548 LLQLFGQAD-QVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAE 606
Query: 183 -YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
+G + + Y++ + + +A I Q M+ +P+ TY ++ + + S
Sbjct: 607 GHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDSK 666
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFARE 272
A+++F M + +P + +YT+L+ A + E
Sbjct: 667 AAVEVFEAMETEGVRPGVRSYTSLLKAISEE 697
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G+ +A T E+ + P T+ L+ A LE + +F+EMR+ G
Sbjct: 275 LINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERG 334
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL---YGKASKSF 241
P+ V ++ +D LK A + + M +P+ TYT ++ G+A ++
Sbjct: 335 TVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQADRAG 394
Query: 242 MALKLFNEMR 251
+ L N+ R
Sbjct: 395 IVLDELNKRR 404
Score = 42.4 bits (98), Expect = 0.35, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL----QGAGIEPDVYA 296
F +F EMRS +P++ Y ALVN A G + A + + +G G++PD
Sbjct: 876 FRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVT 935
Query: 297 YNALMEA 303
Y +L++A
Sbjct: 936 YTSLIKA 942
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS--HKCKPNICTYTALVNAFAREG 273
+RD P ET+ L++N A A++L R+ H + N TY+AL+ A R
Sbjct: 571 RRD--SPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAK 628
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
A I + ++ G++P Y ALME R
Sbjct: 629 KLARAFRIVQSMRETGVKPTEGTYLALMEVCR 660
Score = 40.0 bits (92), Expect = 1.7, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD----CCQPSTETYTLMI 231
VF+EMR G+ P YN+ ++ G +A+ + + M D QP TYT +I
Sbjct: 881 VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLI 940
Query: 232 NLYGKA--SKSFMALKLFNEMR------SHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+A + A ++F M+ S +P TY L+ A A EI+
Sbjct: 941 KAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWR 1000
Query: 284 QLQGAGIEP 292
Q AG+ P
Sbjct: 1001 QQLSAGVAP 1009
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PSAV YN+ ++G ++ G + + M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRL---NKKWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L + + +L S V
Sbjct: 158 IRVAQSVFDAITKW----GLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A+ + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M R +P TYT +I+ K
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G+ PD Y +
Sbjct: 334 DSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M +PD+ +Y ++
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLI 305
Query: 326 DAYGRAG 332
D + G
Sbjct: 306 DGCCKEG 312
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM + KP+ TYT
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTT 303
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY AL+ +A +++ M ++G
Sbjct: 304 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVG 363
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 364 LKPDSRTYTMIINEFCKKG 382
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 139 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 194
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 255 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDL 314
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 315 DSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMI 374
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 375 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 50/257 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + ++ L ++ Y + S +P Y L+ YC G+++KA VF EMR+
Sbjct: 233 VLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK 292
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + YN I GL +G +AV++ ++ + P+ TY ++IN + K A
Sbjct: 293 GIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSA 352
Query: 244 LKLFNEMRSHKCKPNICTY-----------------------------------TALVNA 268
++LFN+++S P + TY T L++A
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCE 315
FAR E+A E+ ++ +G+ PDVY Y+ L+ ++ + MH+ +
Sbjct: 413 FARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHL--Q 470
Query: 316 PDRASYNIMVDAYGRAG 332
P+ YN M+ Y + G
Sbjct: 471 PNSVIYNTMIHGYCKEG 487
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY++L+ + GL + ++ M++ G+ P+A YN I G KA +
Sbjct: 225 VPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFK 284
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M+ TY ++I + K A+KL +++ PNI TY L+N F
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMGC-EPDRA 319
+ A +F QL+ +G+ P + YN L+ Y L+ M C P +
Sbjct: 345 DVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404
Query: 320 SYNIMVDAYGRAGLHEGKCS-YSLVELS 346
+Y I++DA+ R E C +SL+E S
Sbjct: 405 TYTILIDAFARLNHTEKACEMHSLMEKS 432
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L S+ + ++ +++K C +G K + + ++GL P+ V+Y + IDG K GN
Sbjct: 150 LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNV 209
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
A +F +M R P+ TY++++N + K +++ M+ PN Y L
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGC 314
++ + +G+ ++A ++F +++ GI V YN L+ EA +L+ +++ +G
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 315 EPDRASYNIMVDAY 328
P+ +YNI+++ +
Sbjct: 330 SPNIVTYNILINGF 343
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 146 LDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ RCI P++ TY +L+ A+ EKA + M K GL P Y+ + GL GN
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGN 453
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A ++F+ + QP++ Y MI+ Y K S+ AL+L NEM PN+ ++ +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCS 513
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ R+ +EAE + Q+ +G++P V Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C G + A+ +F +M + GL P+ Y+ ++G K G ++ ++
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ MKR P+ Y +I+ Y A K+F EMR + TY L+ R
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
EA ++ ++ G+ P++ YN L+ + RL +++ G P +
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVT 370
Query: 321 YNIMVDAYGRA 331
YN ++ Y +
Sbjct: 371 YNTLIAGYSKV 381
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 187 ANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 246
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++++ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 247 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 306
Query: 326 DAYGRAG 332
D + G
Sbjct: 307 DGCCKEG 313
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y +L +P TY L+ C +G L++A + EM G
Sbjct: 235 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKG 294
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y + IDG K G+ A + +RM ++ + YT +I+ + +S A
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAE 354
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+I TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 355 KMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL------------RLNKKWDPIVL 117
+R Q D+ T W L P+ +++ L+N ++L L P V
Sbjct: 140 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVY 195
Query: 118 MSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
V LI ++S A + E+L IP T+ L+ +C +G ++ A ++
Sbjct: 196 TYSV---LINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIY 252
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
+ M L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 253 KRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKE 312
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
A K M + + YTAL++ +EG +AE++ ++ G++PD+ Y
Sbjct: 313 GDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTY 372
Query: 298 NALMEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
++ + +L+ M G P +YN++++
Sbjct: 373 TMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 192 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEI 251
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++RM P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 252 YKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 311
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG + A + +++ I D AY AL+ +A +++ M +G +PD +
Sbjct: 312 EGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGT 371
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 372 YTMIINEFCKKG 383
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ +K A+ +E+LD P A L+ + G L++A+ +F+ +
Sbjct: 452 VLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIER 511
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ S V N+ I G K G A+ F+RM P TY+ +I+ Y K + A
Sbjct: 512 GIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGA 571
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L++F M CKPN+ T+T+L+N F R G AE++FE+++ G EP+V Y L+
Sbjct: 572 LRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGY 631
Query: 302 --------EAYRLISRMHMG-CEPDRASYNIMVDA 327
+A +M + C P+ A++N +V+
Sbjct: 632 FCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNG 666
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++K YC G++ A F+ M P Y++ IDG +K + + A+ +F M +
Sbjct: 523 MIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKT 582
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C+P+ T+T +IN + + A K+F EMRS +PN+ TYT L+ F +EG +A
Sbjct: 583 CKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKAC 642
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYG 329
FEQ+ P+ +N L+ + + + + + N+ ++ +G
Sbjct: 643 FFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFG 692
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 117 LMSCVSIL-LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA 175
+ +C S+L L+ +G+ + +K Y E++D T ++ K C G +E+
Sbjct: 167 VFACNSLLNLLVHHGKVEIARKV---YDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRH 223
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+ + G P+ V YN+ IDG K G+ ++A +F+ +K P+ +TY MIN +
Sbjct: 224 LIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFC 283
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K K KL EM+ ++ + +++A + G EA + + +G EPD+
Sbjct: 284 KKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMA 343
Query: 296 AYNALM----------EAYRLISR-MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
YN L+ EA L+ + G P++ SY ++ A+ + G + + S L+E
Sbjct: 344 TYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYV-RASELLIE 402
Query: 345 LS 346
+S
Sbjct: 403 MS 404
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 99/266 (37%), Gaps = 47/266 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y + ++A + EL +PT TY ++ A+C G E + + EM++ G
Sbjct: 243 LIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERG 302
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L S ++N ID K G +A + + M C+P TY +IN K A
Sbjct: 303 LAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAE 362
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF---------------------- 282
+L PN +YT L++AF++ G A E+
Sbjct: 363 ELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGL 422
Query: 283 -------------EQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDR 318
+++ GI PD YN LM L+ + PD
Sbjct: 423 VVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDA 482
Query: 319 ASYNIMVDAYGRAG-LHEGKCSYSLV 343
+VD + R G L E K + L
Sbjct: 483 FVNATLVDGFIRHGNLDEAKKLFQLT 508
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +Y L+ A+ +G +A + EM + G + Y + + GL+ G A+ +
Sbjct: 375 PNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTV 434
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M P Y ++++ K + A +L EM P+ LV+ F R
Sbjct: 435 RDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIR 494
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHMGCE-PDRAS 320
G +EA+++F+ GI+ V NA+++ Y RM G PD +
Sbjct: 495 HGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFT 554
Query: 321 YNIMVDAY 328
Y+ ++D Y
Sbjct: 555 YSTIIDGY 562
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFRE-MRKYGLPPSAVVYNSYIDGLL 200
LE + S+ IPT + + ++ AY SGL+++A ++ + + P NS ++ L+
Sbjct: 119 LETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLV 178
Query: 201 KGGNPQKAVEIFQRM----------------KRDC-------------------CQPSTE 225
G + A +++ M K C C P+
Sbjct: 179 HHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIV 238
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
Y +I+ Y K A LF E++ P + TY A++NAF ++G E +++ ++
Sbjct: 239 FYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEM 298
Query: 286 QGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ G+ + +N + +EA + M GCEPD A+YN +++ G
Sbjct: 299 KERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKG 356
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR-MKRD 218
LLK + ++ E + M+ L P+ + I G ++A+E++ +
Sbjct: 102 LLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVH 161
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
C P ++NL K +A K+++EM + T + +EG EE
Sbjct: 162 NCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEG 221
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMHM--------GCEPDRASYNIMVDA 327
+ E+ G G P++ YN L++ Y I R ++ G P +Y M++A
Sbjct: 222 RHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINA 281
Query: 328 YGRAGLHEG 336
+ + G E
Sbjct: 282 FCKKGKFEA 290
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 24/187 (12%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + +AE + E+ P TY +L+ +C G L KA F +M
Sbjct: 593 LINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINK 652
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ +N ++GL I KR QP+ + L
Sbjct: 653 CIPNDATFNYLVNGLTNNNG------IAISSKRSNSQPN------------------LTL 688
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ F M S I Y +++ + + + A ++ +++ G PD ++ AL+
Sbjct: 689 EFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGL 748
Query: 305 RLISRMH 311
L R+
Sbjct: 749 CLEGRLQ 755
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G ++LH++ + ++ P TY L++ C G +E A VF +M G+ P+A
Sbjct: 293 GAETLHRR-------MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNA 345
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
VV+ ID K G+ + +E+ + M+ +P TY ++N +A A + E
Sbjct: 346 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 405
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------- 301
MRS +P+ TYT L++ + +E + A EI + + G+ D Y AL+
Sbjct: 406 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 465
Query: 302 --EAYRLISR-MHMGCEPDRASYNIMVDAYGRAG 332
+A R++ M G EPD +Y +++DA+ R G
Sbjct: 466 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 11/225 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V +LI+A+ +K + + E+ + P TY ++ C + L+ A +
Sbjct: 345 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 404
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EMR GL P V Y + IDG K A+EI Q M + TYT +I+ KA
Sbjct: 405 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 464
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+S A ++ EM +P+ TYT +++AF R+G + + +++Q G +P V YN
Sbjct: 465 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 524
Query: 299 ALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+M + + +M ++G PD +YNI++D + + G
Sbjct: 525 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 569
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + +L+ A+C G E + REMR+ G+ P AV YN+ ++GL + + + A I
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ +P T TYT +I+ Y K + MA+++ M + + TYTAL++ ++
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
G +AE + ++ AG+EPD Y +++A+ RL+ M + G +P +
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 522
Query: 321 YNIMVDAYGRAG 332
YN++++ + + G
Sbjct: 523 YNVIMNGFCKLG 534
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
YL+LLD+ P + +L++ G L A+ VF EM+ G+ + V +N+ I G+ +
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A + +RM P TY +I + + A +F +M KPN
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
+T L++A ++G E E+ +++ G+ PD YNA++ A ++ M
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407
Query: 312 -MGCEPDRASYNIMVDAY 328
G PD +Y ++D Y
Sbjct: 408 SAGLRPDTVTYTTLIDGY 425
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
+A A + ++ GLPP A ++N + L++ G A +F M+ + + ++ MI
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ +A A L M P++ TY AL+ R G E+A +FE++ G G++
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 292 PDVYAYNALMEAY------RLISRMH-----MGCEPDRASYNIMVDAYGRA 331
P+ + L++A+ + +H G PD +YN +V+ RA
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 393
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY L+ +G AE V EM + GL P Y ID + G+ + + + +
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M+ +P TY +++N + K + A L N M + P+ TY L++ + G
Sbjct: 510 EMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHG 569
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ EE+ G PD+ Y +++
Sbjct: 570 KVTDIEELK---SAKGTVPDLGVYTSIV 594
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 100 INVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL 159
++++++++ N + + L LI + AE E++++ P TY +
Sbjct: 431 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 490
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ A+C G ++ + +EM+ G P V YN ++G K G + A + M
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-CKPNICTYTALVNAFARE 272
P TY ++++ + K K + E++S K P++ YT++V ++
Sbjct: 551 VSPDDITYNILLDGHCKHGK----VTDIEELKSAKGTVPDLGVYTSIVGEIVKK 600
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA E+ S P Y +++ + L A F MR+ G+ P V +N+
Sbjct: 379 QKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTL 438
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID KGG +A+E+F M+ C T TY +MINL G+ + + EM+
Sbjct: 439 IDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGL 498
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
PNI TYT LV+ + R G +EA + E ++ G++P Y+AL+ AY
Sbjct: 499 VPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALN 558
Query: 306 LISRMHM-GCEPDRASYNIMVDAYG 329
++ M G E N +++A+G
Sbjct: 559 VVKAMRADGLEASTVVLNSLINAFG 583
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A + +EM G
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 357
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ PS+ V++ + G G QKA + + M +P Y +MI+ +GK + A+
Sbjct: 358 VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAM 417
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
F+ MR +P++ T+ L++A + G + A E+F++++ + YN ++
Sbjct: 418 DAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLL 477
Query: 302 -EAYR------LISRM-HMGCEPDRASYNIMVDAYGRAG 332
E R +++ M G P+ +Y +VD YGR+G
Sbjct: 478 GEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSG 516
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL++AY + + A E+ P+ ++ +L + G +KA AV REM
Sbjct: 332 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 391
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P YN ID K A++ F RM+ + +P T+ +I+ + K + A
Sbjct: 392 GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRA 451
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++LF+EMR C TY ++N E E E + +++ G+ P++ Y L++
Sbjct: 452 IELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDV 511
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
Y R G +P Y+ +V+AY + GL
Sbjct: 512 YGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 552
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ + H +A + E+ +S C TY +++ E EA+ EM++ G
Sbjct: 438 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 497
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ + Y + +D + G ++AV+ + MK D +PS Y ++N Y + + AL
Sbjct: 498 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 557
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ MR+ + + +L+NAF + EA + + ++ G+ PDV Y LM+A
Sbjct: 558 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617
Query: 305 RLISR-----------MHMGCEPDRASYNIMVDA 327
+ + + GC PDR + ++ A
Sbjct: 618 IRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSA 651
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLEL-LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI + G +AE +LE L P Y LLK Y G L+ AE V EM +
Sbjct: 262 LISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQC 321
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G+ P Y+ +D + G + A + + M+ D +PS+ ++ ++ + G+ K+
Sbjct: 322 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKA 381
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
F L+ EM + +P+ Y +++ F + A + F++++ GIEPDV +N L
Sbjct: 382 FAVLR---EMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTL 438
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
++A+ L M C +YNIM++ G EG
Sbjct: 439 IDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEG 485
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 84 DAFD-----SLPPTHATWDDLINV---------SVQLRLNKKWDPIVLMSCVSILLIEAY 129
DAFD + P TW+ LI+ +++L + L + ++I
Sbjct: 418 DAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLL 477
Query: 130 GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSA 189
G++ + E E+ + +P TY L+ Y SG ++A M+ GL PS
Sbjct: 478 GEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSP 537
Query: 190 VVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
+Y++ ++ + G A+ + + M+ D + ST +IN +G+ + A +
Sbjct: 538 TMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQF 597
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M+ + +P++ TYT L+ A R E+ I+E++ +G PD A L A R +
Sbjct: 598 MKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKH 657
Query: 310 MHMG 313
M +
Sbjct: 658 MRVA 661
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC---CQPSTETYTLMINLYGK 236
+R++ P Y+ + LL +P A + + + +P ++ +I+ + +
Sbjct: 174 LREHSFLPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFAR 233
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVY 295
A AL+L ++ P TAL+++ EAE +F + AG I+P
Sbjct: 234 ARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTR 293
Query: 296 AYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
AYNAL++ Y I + G PD A+Y+++VDAY RAG
Sbjct: 294 AYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 341
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 26/271 (9%)
Query: 91 PTHATWDDLINVSVQLR---LNKKW-------DPIVLMSCVSIL-----LIEAYGQKSLH 135
P+ D+++ + L+ + K+W + +V M+C + LI + L
Sbjct: 256 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 315
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++ ++++ C P YA ++ C G LE A + M YGL P+ V YN+
Sbjct: 316 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 375
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ GL ++ E+ M C T+ ++++ + + ++L +M H C
Sbjct: 376 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 435
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++ +A
Sbjct: 436 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 495
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L+S+M GC + ++N +++ + GL E
Sbjct: 496 LMSQMIQQGCPLNPITFNTLINFLCKKGLVE 526
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + AE + +M + G
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 504
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + + +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 505 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 564
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ +A +REG + ++F+ +Q I D YNA++
Sbjct: 565 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 624
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y I++ G
Sbjct: 625 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGF 664
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++ E E+ D C + T+ +L+ +C +GL+++ + +M ++G P + Y +
Sbjct: 386 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 445
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A L ++M C
Sbjct: 446 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGC 505
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
N T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 506 PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE 565
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A R G
Sbjct: 566 LLNVMVNKGMSPNTIIYSSIASALSREG 593
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G LE A R +PP+A Y + L G A+ + M
Sbjct: 130 YNAMVAGYCRAGQLESAR---RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P Y +++ + A+++ ++ + C ++ ++NA +G +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
EA + L G EPDV +YNA+++ + R + M C P+ ++N ++
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 307 SYLCRNGLFE 316
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 11/187 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++L+A C G A V ++ G N ++ + G+ +A+
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + + C+P +Y ++ A + +L EM C PNI T+ L++
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
R GL E E+ Q+ G PD+ Y +++ A+ +++RM G +P+
Sbjct: 310 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 369
Query: 319 ASYNIMV 325
YN ++
Sbjct: 370 VCYNTLL 376
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++A C G + A AV EM + G P +Y+ ++ +GG + AV +
Sbjct: 157 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 216
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ + C L++N AL L ++ S C+P++ +Y A++
Sbjct: 217 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 276
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH--------MGCEPDRAS 320
+E+ E++ P++ +N L+ L R+H GC PD
Sbjct: 277 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 336
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 337 YATIIDGICKEG 348
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K L ++A ++L + C P +Y+ ++ +G ++A + M G
Sbjct: 515 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 574
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y+S L + G K +++F ++ + Y +I+ K ++ A+
Sbjct: 575 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 634
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ M S C PN TYT L+ A EG +EA+E+ +L G
Sbjct: 635 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S V+ LL G K + AE + L R P T+ ++ C G L KA V +
Sbjct: 157 SSVNALLAGLVGAKRVDL-AEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215
Query: 179 EMRKYGLPPSAVVYNSYIDGLLK---GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+++ +GL PS YNS IDG K GN + + M P+ T+ ++IN Y
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYC 275
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K S + A+++F EM+ ++ TY +L++ EG EE ++ E+++ G+ P+
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335
Query: 296 AYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
+ +++ + M EPD YNI++D Y R G E
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 46/231 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++++ PT T+ +L+ YC + A VF EM++ G+ S V YNS I GL G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 204 NPQKAVEIFQRMK---------------RDCC--------------------QPSTETYT 228
++ V++ + M+ + C +P Y
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++I++Y + K A+ + M PN+ TY L+ F+R G A + ++++
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Query: 289 GIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
GIE DV YN L+ +A +L+ M +G EP+ +YN ++ +
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +L+ Y G +E A AV M K G+ P+ YN I G + G+ + A +
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
MK + TY ++I + A+KL +EM +PN TY ++ F
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+G + A EI +++ +V YN ++ + I +M
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKM 525
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ A C G + KA + EM + GL P+ + YN+ I G GN + A EI RM
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ + + TY + I + + K A L NEM PN TY + +EG+
Sbjct: 501 EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMM 555
Query: 276 EEA 278
E+
Sbjct: 556 EKG 558
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 5/166 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ + SG A + EM++ G+ V YN I L G +KAV++
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M +P+ TY +I + A ++ M + + N+ TY + F +
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPD 317
G +EA ++ ++ + P+ Y + E M G PD
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-----MEKGYTPD 562
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+PST + ++ A + +A K F + P+I T+ +++ R G +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 281 IFEQLQGAGIEPDVYAYNALMEAY-------------RLISRM-HMGCEPDRASYNIMVD 326
+ + ++ G+ P V YN+L++ Y L+ M G P ++ ++++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 327 AY 328
Y
Sbjct: 273 GY 274
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+++ CIP + TY ++ YC SG+L++A + ++ G P V Y S I+GL G+
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGD 365
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A+E+F + +P Y ++ + AL++ NEM C P+I TY
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMG 313
++N + G +A + G PDV+ +N L++ Y +L+ RM G
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485
Query: 314 CEPDRASYNIMVDAYGRAG 332
PD +YN +++ +AG
Sbjct: 486 IAPDVITYNSVLNGLCKAG 504
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y + + ++A + + +P TY L+ C G +E+A +F E +
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P VVYNS + GL + G A+++ M + C P TY ++IN K A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ N+ P++ T+ L++ + + + A ++ E++ GI PDV YN+++
Sbjct: 441 VVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGL 500
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAY 328
E M + GC P+ +YNI+++ +
Sbjct: 501 CKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 535
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 161 LKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC 220
++ C G LE+A A+ M Y + P V YN+ + GL K Q+A + RM C
Sbjct: 253 IRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
P TY +I+ Y K+ A +L + P+ TY +L+N EG E A E
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 281 IFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDAYG 329
+F + Q ++PD+ YN+L + A ++++ M GC PD +YNI+++
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431
Query: 330 RAG 332
+ G
Sbjct: 432 KMG 434
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T+ L+ YC L+ A + M YG+ P + YNS ++GL K G ++ E
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F+ M C+P+ TY ++I + K ++ A + M P+ ++ L++ F
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
R G + A +F++L G +N L+ AY M M G +PD
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631
Query: 320 SYNIMVDAYGRAG 332
+Y I+VD +A
Sbjct: 632 TYRILVDGLCKAA 644
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+E + + P TY L++ C +++A M G P YN+ IDG K
Sbjct: 269 VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G Q+A E+ + P TY +IN AL+LFNE ++ KP++ Y
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-----------AYRLISRMH 311
+LV R+GL A ++ ++ G PD++ YN ++ A + +
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIV 448
Query: 312 MGCEPDRASYNIMVDAY 328
G PD ++N ++D Y
Sbjct: 449 KGYLPDVFTFNTLIDGY 465
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+ T+ E++ C P TY +L++ +C LE+A V M + GL P AV +N+
Sbjct: 507 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTL 566
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I G + G+ A +FQ++ + +T+ ++I Y MA K+F EM S
Sbjct: 567 IHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGY 626
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
KP++ TY LV+ + + A ++ G P + + ++ + R+
Sbjct: 627 KPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRV 681
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ C P TY +++ C G + A V + G P +N+ IDG K
Sbjct: 410 EMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRL 469
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+++ +RM P TY ++N KA K+ + F EM C+PN TY
Sbjct: 470 KLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYN 529
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HM 312
L+ F + EEA + ++ G+ PD ++N L+ AY L ++
Sbjct: 530 ILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK 589
Query: 313 GCEPDRASYNIMVDAY 328
G ++NI++ AY
Sbjct: 590 GYSATADTFNILIGAY 605
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++A + H +A Y+ +L + P T+ + LK++C++G A + R + + G
Sbjct: 112 IMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERG 171
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
Y + + GL G+ A +F M P T+ +++ + +
Sbjct: 172 CDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESG 231
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L ++ N T + +G EEA + E++ GA + PDV YN LM
Sbjct: 232 ALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGL 290
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
EA + + RM + GC PD +YN ++D Y ++G+
Sbjct: 291 CKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGM 330
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 108 LNKKWDPIVLMSC-----VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
+N+ ++ ++L C +LIE + + + ++A + + +P ++ L+
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
+C +G L+ A +F+++ + G +A +N I N Q A +IF M +P
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
TY ++++ KA+ A EM S P++ T+ ++N A EA I
Sbjct: 629 DLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688
Query: 283 EQLQGAGIEPDV 294
+ G+ P+V
Sbjct: 689 HIMVRMGVVPEV 700
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
D QP Y I Y +A + A+ F M C P Y A+++A ++
Sbjct: 68 DSLQP---LYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQ 124
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMV 325
A +++ ++ AG+ PD + ++++ L R H+ GC+ A+Y +V
Sbjct: 125 AHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVV 183
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 39/194 (20%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS-AVVYNSYIDGLLKGGN 204
L + IP Y L++ +G L+ +A R + P S +Y + I + G
Sbjct: 30 LTASTIPA---YRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGR 86
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS-------------------------- 238
+ AV+ F+RM C P+ Y +++ A+
Sbjct: 87 LRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTV 146
Query: 239 --KSF-------MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
KSF +AL+L + C Y +V G A +F+++ G
Sbjct: 147 RLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRD 206
Query: 290 IEPDVYAYNALMEA 303
+ PDV +N ++ A
Sbjct: 207 VFPDVATFNNVLHA 220
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA+ E+ P E T+ +L+ +C + A VF EM + G+ P+ V YNS I
Sbjct: 198 KADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLI 257
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+GL G +A + +M C +P+ T+ ++N + K A +LF +M +
Sbjct: 258 NGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRIT 317
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
PN+ TY L++A+ ++ E+A ++ + G G+ PDV YN L+ A
Sbjct: 318 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNR 377
Query: 307 ISRMHMG-CEPDRASYNIMVDAYGRAG 332
+S M + D +YNI++D+ G
Sbjct: 378 VSEMDTKHLKADLITYNILMDSLCNKG 404
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + + K+A + ++ R P TY +L+ AYC +E A A++R M G
Sbjct: 291 LLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 350
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN I GL + G+ + A M + TY ++++ + L
Sbjct: 351 VYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTL 410
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREG 273
+L +EM KP+ TY +++ +++EG
Sbjct: 411 RLLDEMCKKGLKPSQLTYNTMIDGYSKEG 439
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++++S P T+ LL +C + ++++A +F +M K + P+ YN ID K
Sbjct: 275 QMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDE 334
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N + A +++ M P TY +I + A +EM + K ++ TY
Sbjct: 335 NMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYN 394
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L+++ +G ++ + +++ G++P YN +++ Y
Sbjct: 395 ILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGY 435
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+AY + + A Y +L P TY L+ C G LE A EM
Sbjct: 325 ILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTK 384
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
L + YN +D L G +K + + M + +PS TY MI+ Y K
Sbjct: 385 HLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSK 437
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
K + A + EM++ PN T+ L++ F + A ++F ++ G++P+V YN
Sbjct: 195 KMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYN 254
Query: 299 ALM----------EAYRLISRMHMGC-EPDRASYNIMVDAY 328
+L+ EA L +M C EP+ ++N +++ +
Sbjct: 255 SLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGF 295
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
TY +L+ + C G ++K + EM K GL PS + YN+ IDG K GN
Sbjct: 392 TYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGN 440
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ C P TY L+ +Y + L +A VF +M++ G P V Y + ID K G
Sbjct: 411 QMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAG 470
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ +++RM+ P T TY++MIN GK+ A +LF EM C PNI TY
Sbjct: 471 FLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYN 530
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHM 312
L+ A+ + A +++ +Q AG +PD Y+ +ME
Sbjct: 531 ILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQN 590
Query: 313 GCEPDRASYNIMVDAYGRAG 332
PD Y +++D +G+AG
Sbjct: 591 NWVPDEPVYGLLIDLWGKAG 610
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +YG+ + +A + ++ + C P TY L+ + +G L+ A +++ M++ G
Sbjct: 427 LIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVG 486
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P Y+ I+ L K GN A +F M C P+ TY ++I L KA AL
Sbjct: 487 LSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTAL 546
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KL+ +M++ KP+ TY+ ++ G EEAE +F +++ PD Y L++ +
Sbjct: 547 KLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLW 606
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M +D CQP+ TY +I+ YG+A+ AL +FN+M+ C+P+ TY L++
Sbjct: 407 KLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIH 466
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
A+ G + A ++E++Q G+ PD + Y+ ++ A+RL M GC P+
Sbjct: 467 AKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNI 526
Query: 319 ASYNIMVDAYGRA 331
+YNI++ +A
Sbjct: 527 VTYNILIALQAKA 539
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 166 MSGLLEKA------EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
M G+L +A + +M K G P+ V YN I + +A+ +F +M+
Sbjct: 392 MVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMG 451
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C+P TY +I+++ KA +A+ ++ M+ P+ TY+ ++N + G A
Sbjct: 452 CEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAH 511
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
+F ++ G P++ YN L+ A +L M + G +PD+ +Y+I+++
Sbjct: 512 RLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVL 571
Query: 329 GRAGLHE 335
G G E
Sbjct: 572 GYCGYLE 578
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I G+ A + E++D C+P TY +L+ + + A ++R+M+
Sbjct: 496 VMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNA 555
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y+ ++ L G ++A +F MK++ P Y L+I+L+GKA A
Sbjct: 556 GFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKA 615
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ ++ M PN+ T +L++AF R +A + + + G+ P + Y L+
Sbjct: 616 WEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 673
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y + + P TY++++ SG L A +F EM G
Sbjct: 462 LIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQG 521
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN I K N Q A+++++ M+ +P TY++++ + G A
Sbjct: 522 CVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAE 581
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F EM+ + P+ Y L++ + + G E+A E + + AG+ P+V N+L+ A+
Sbjct: 582 AVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAF 641
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLV 343
+ R+ PD +YN++ + GL+ +Y+L+
Sbjct: 642 LRVHRL-----PD--AYNLLQNMV-TLGLNPSLQTYTLL 672
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 208 AVEIFQRMKRDCCQPS----TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A+ F +KR QP TYT M+ + G+A + KL +M C+PN+ TY
Sbjct: 369 ALSFFYWLKR---QPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYN 425
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-M 312
L++++ R EA +F Q+Q G EPD Y L++ A + RM +
Sbjct: 426 RLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEV 485
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +Y++M++ G++G
Sbjct: 486 GLSPDTFTYSVMINCLGKSG 505
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 19/243 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + ++ A Y ++ ++ P + TY+++++ G LE+AEAVF EM++
Sbjct: 531 ILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQN 590
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P VY ID K GN +KA E + M R P+ T +++ + + + A
Sbjct: 591 NWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDA 650
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFARE------GLCEE--------AEEIFEQLQGAG 289
L M + P++ TYT L++ G C E A + + AG
Sbjct: 651 YNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAG 710
Query: 290 IEPDVYAYNALMEAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVK 348
PD N + + MH E R + +VD ++GL E S V
Sbjct: 711 --PD--GQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKN 766
Query: 349 HYP 351
YP
Sbjct: 767 VYP 769
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 35/205 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E G ++AE + E+ + +P E Y LL+ + +G +EKA + M +
Sbjct: 566 IVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRA 625
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----------- 232
GL P+ NS + L+ A + Q M PS +TYTL+++
Sbjct: 626 GLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDM 685
Query: 233 --------LYGKASKSFM----------------ALKLFNEMRSHKCKPNICTYTALVNA 268
+ G + +F+ K + M S + A+V+
Sbjct: 686 GFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDF 745
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPD 293
+ GL EEA ++E + PD
Sbjct: 746 LHKSGLKEEAGSVWEVAAQKNVYPD 770
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 22/257 (8%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
T W+ + V LR + P S + I LI G+ +KA + ++ C
Sbjct: 131 TALRWESALKVFELLREQIWYRP---YSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCD 187
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ ++Y LL AY SGLL+KA ++ EM R P Y+ I ++ KA
Sbjct: 188 VSHESYTALLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKT 247
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSF--MALKLFNEMRSHKCKPNICTYTALVNA 268
+ M+ P+T TY +I+ YGKA K F M L + C+P++ T + + A
Sbjct: 248 LLSNMESLGISPNTITYNTLIDAYGKA-KMFEEMEATLVKMLSQQNCEPDVWTMNSTLRA 306
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCE 315
F G E E+ +E+ QGAGIEP + +N L+++Y + + H
Sbjct: 307 FGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWT 366
Query: 316 PDRASYNIMVDAYGRAG 332
+YNI++DA+GRAG
Sbjct: 367 I--ITYNIVIDAFGRAG 381
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI+AYG+ + ++ E T +++L + C P T L+A+ +SG +E E + + +
Sbjct: 267 LIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGA 326
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS + +N +D K G+ +K + + M++ + TY ++I+ +G+A
Sbjct: 327 GIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQM 386
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF MRS + KP+ T +LV A+ + E+ E + ++ + I D +N L++A
Sbjct: 387 EYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDA 446
Query: 304 Y-----------RLISRMHMGCEPDRASYNIMVDAYGRAGL 333
Y LI G PD+ +Y M+ AY G+
Sbjct: 447 YGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGM 487
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 206 QKAVEIFQRMKRDCC-QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+ A+++F+ ++ +P + Y +I + GK + A +LF M C + +YTA
Sbjct: 136 ESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTA 195
Query: 265 LVNAFAREGLCEEAEEIFEQLQ-GAGIEPDVYAYNALME----------AYRLISRMH-M 312
L++A+ R GL ++A + E+++ +PDV+ Y+ L++ A L+S M +
Sbjct: 196 LLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESL 255
Query: 313 GCEPDRASYNIMVDAYGRAGLHE 335
G P+ +YN ++DAYG+A + E
Sbjct: 256 GISPNTITYNTLIDAYGKAKMFE 278
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+A+G+ K+ E+ + + R P+ T L++AY + EK E V R +
Sbjct: 372 IVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENS 431
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+ V +N +D + G + + M++ +P TY MI Y
Sbjct: 432 DITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAY 482
>gi|297804554|ref|XP_002870161.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
gi|297315997|gb|EFH46420.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
Length = 702
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + LK + S LEK+E +F EM + G+ P + + I + G P++AVE F++M
Sbjct: 178 YNVTLKVFRKSKNLEKSEKLFDEMLERGVKPDNATFTTIISCARQSGVPKRAVEWFEKMS 237
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C+P T MI+ YG+A MAL L++ R+ K + + T++ L+ + G +
Sbjct: 238 SFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
I+E+++ G++P++ YN L+++ R + G P+ ++Y ++
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAALI 357
Query: 326 DAYGRA 331
AYGRA
Sbjct: 358 RAYGRA 363
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+AYG+ + A Y + T++ L++ Y +SG + ++ EM+ G
Sbjct: 251 MIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V+YN +D + + P +A I + + + P+ TY +I YG+A AL
Sbjct: 311 VKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDAL 370
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI-EPDVYAYNALMEA 303
++ EM+ + Y L++ A G +EA EIF+ ++ +PD + +++L+
Sbjct: 371 VIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 304 YR-----------LISRMHMGCEPDRASYNIMVDAYGRA 331
Y L+ G EP ++ YG+A
Sbjct: 431 YSCSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKA 469
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+++ G+ +A+ + +L+ + P TYA L++AY + + A ++REM++ G
Sbjct: 321 LLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDALVIYREMKEKG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMA 243
L + ++YN+ + G +A EIFQ MK + C P + T++ +I +Y + + A
Sbjct: 381 LSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYSCSGRVSEA 440
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+MR +P + T+++ + + ++ F+Q+ GI PD
Sbjct: 441 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 136/342 (39%), Gaps = 72/342 (21%)
Query: 63 SPTAQQILR--FVQREVDSNTIWDAFDSLPPTHATWDDLIN------------VSVQLRL 108
SP A Q+ R + R + ++ DS P A D+I V++
Sbjct: 94 SPRASQLRRKSYDSRYSSLIKLAESLDSCKPNEADVCDVITGFGGKLFEQDAVVTLNNMT 153
Query: 109 NKKWDPIVLMSCVSIL-----------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
N + PIVL + + + ++ + + +K+E + E+L+ P T+
Sbjct: 154 NPETAPIVLNNLLETMKPSREVILYNVTLKVFRKSKNLEKSEKLFDEMLERGVKPDNATF 213
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++ SG+ ++A F +M +G P V + ID + GN + A+ ++ R +
Sbjct: 214 TTIISCARQSGVPKRAVEWFEKMSSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRART 273
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC----------------- 260
+ + T++ +I +YG + L ++ EM++ KPN+
Sbjct: 274 EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQ 333
Query: 261 ------------------TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
TY AL+ A+ R ++A I+ +++ G+ V YN L+
Sbjct: 334 AKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDALVIYREMKEKGLSLTVILYNTLLS 393
Query: 302 ---------EAYRLISRMH--MGCEPDRASYNIMVDAYGRAG 332
EA+ + M C+PD +++ ++ Y +G
Sbjct: 394 MCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYSCSG 435
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF EM + PN T+T L++ + G
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVX 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGDLETAXXY 333
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C +E A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M P TY +I YG K + A L +EM KP+ TYT L++
Sbjct: 264 YKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG E A +++ I D AY AL+ +A +++ M +G +P+
Sbjct: 322 CKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 382 GTYTMIINEFCKKG 395
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S + A + E+LD+ +P T+ L+ +C +G + A ++++M
Sbjct: 208 TYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E E+A E+FE++ G+ P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY L+ C G LE A + M K + V Y + I GL + G A ++
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ M +P TYT++IN + K + KL EM+ P++ T
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXML 185
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M + G +PD+ +Y ++
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305
Query: 326 DAYGRAG 332
+ + G
Sbjct: 306 NGCCKEG 312
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 303
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L+N +EG + A E +++ I D AY AL+ +A +++ M +G
Sbjct: 304 LINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVG 363
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 364 LKPDARTYTMIINEFCKXG 382
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 293
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + I+G K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 294 LKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAE 353
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F + G ++ +++Q G P V YN LM
Sbjct: 354 KMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQ---LRLNKKWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++ L +L S V
Sbjct: 139 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVY 194
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +IN K
Sbjct: 255 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDL 314
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 315 DSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 374
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 375 INEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 17/223 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A G ++A ++ D+ P T+ ++L AY KA + F M+
Sbjct: 11 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTN 70
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM--KRDCCQPSTETYTLMINLYGKASKSFM 242
+ P N I L+K +A+EIF M KR C+P T+T +I+LY +
Sbjct: 71 IRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIED 130
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
+F+ M + KPNI +Y AL++A+A G+ +EA +F++++ +G PDV +Y +L+
Sbjct: 131 CKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLIS 190
Query: 302 ------------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
E + ++ R C+P+ SYN ++DAYG G
Sbjct: 191 TFGRSQQPARAREVFDMMKRNK--CKPNLVSYNALMDAYGSNG 231
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 86/156 (55%)
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S C P T+ ++ Y + G +E +AVF M G+ P+ V YN+ I G ++
Sbjct: 106 SECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKE 165
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A +F MKR P +YT +I+ +G++ + A ++F+ M+ +KCKPN+ +Y AL++
Sbjct: 166 AFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMD 225
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
A+ G +A +I +++ GI P+V + L+ A
Sbjct: 226 AYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAA 261
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + + + + +L P +Y L+ AY G+ ++A +VF EM++ G
Sbjct: 118 IIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSG 177
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S I + P +A E+F MKR+ C+P+ +Y +++ YG A+
Sbjct: 178 FCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAV 237
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM PN+ + L+ A R G + + + GI + A N+ + +Y
Sbjct: 238 DILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSY 297
Query: 305 RLI-----------SRMHMGCEPDRASYNIMVDAYGRAGLHE 335
I S + +PD ++ I++ R +E
Sbjct: 298 MNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYE 339
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +G+ +A + + ++C P +Y L+ AY +G L +A + REM + G
Sbjct: 188 LISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDG 247
Query: 185 LPPSAVVY-----------------------------------NSYIDGLLKGGNPQKAV 209
+ P+ V NS I + G +KA+
Sbjct: 248 IHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAI 307
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+++ M+ +P + T+T++I+ + SK AL F EM + + Y++++ A+
Sbjct: 308 NLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAY 367
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+++G +AE +F L+G+G PD+ Y A++ AY
Sbjct: 368 SKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAY 402
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 114 PIVLMSCVSILLIEAYGQK----SLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGL 169
P V+ C + +GQK S+ AE + L C +Y + G
Sbjct: 250 PNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNI-------GE 302
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
EKA ++R M P +V + I G + ++A+ F+ M S+E Y+
Sbjct: 303 YEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSS 362
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
MI Y K + A LFN ++ C P++ TYTA++NA++ + E+ ++++++
Sbjct: 363 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANN 422
Query: 290 IEPDVYAYNALMEAY 304
I+ D A +ALM+A+
Sbjct: 423 IQLDSIACSALMKAF 437
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I +Y ++KA Y + + P T+ +L+ C E+A F+EM +
Sbjct: 294 IGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRI 353
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P S+ +Y+S I K G KA +F +K C P TYT MIN Y +
Sbjct: 354 PLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCA 413
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
L+ EM ++ + + +AL+ AF + + E ++ GI
Sbjct: 414 LYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGI 458
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I AY ++ KAE + L S C P TY ++ AY S + EK A+++EM
Sbjct: 363 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANN 422
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR--------------------------- 217
+ ++ ++ + KG + + + MK
Sbjct: 423 IQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKAT 482
Query: 218 ---DCCQPSTETYTL-----MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ +PS +L ++ GK+ K+ + +KLF + NI TY+ L+
Sbjct: 483 DLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNL 542
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
G + E+ + + AGI+P YN ++
Sbjct: 543 LSAGKWRKYIEVLQWMNDAGIQPSHAMYNNIL 574
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + S +++A + E+LD R + + Y+ ++ AY G L KAE++F ++
Sbjct: 327 ILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGS 386
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V Y + I+ +K ++Q M+ + Q + + ++ + K +++
Sbjct: 387 GCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNV 446
Query: 244 LKLFNEMR 251
L L M+
Sbjct: 447 LILAEIMK 454
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 13/232 (5%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
I + C+ ++ Y + ++ A Y +L++ C P + TYA + AYC GL KAE
Sbjct: 361 IGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAE 420
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F EM + G V Y+S I K G + A+ + +MK CQP+ Y +++ ++
Sbjct: 421 DIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMH 480
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GKA KL+ EM+ K P+ +YT++++A+ + E+ E+ + + + G D
Sbjct: 481 GKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTID- 539
Query: 295 YAYNALM-----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLH 334
A+ +M E +L+ M + G D Y ++A AGL
Sbjct: 540 KAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQ 591
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 12/214 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K AE Y E + + + L+ Y G LEKA + M+ + + S ++ +
Sbjct: 312 KLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAI 371
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G + AV++++++ D C+P TY IN Y + A +F EM
Sbjct: 372 VNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGF 431
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+ Y++L++ + + G ++A + +++ G +P+V+ YN LME + +
Sbjct: 432 DKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEK 491
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
L M PD+ SY ++ AY +A E KC
Sbjct: 492 LWKEMKRKKIAPDKVSYTSIISAYVKASEFE-KC 524
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 46/221 (20%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI-------------------- 196
Y +L ++ SG + ++ FR+MRK G+ +Y++ I
Sbjct: 263 YGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAK 322
Query: 197 -DGLLKG--------------GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
LL+ G+ +KA+EI + MK S + ++N Y
Sbjct: 323 AKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYE 382
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A+K++ ++ C+P TY + +NA+ R GL +AE+IF +++ G + V AY++L+
Sbjct: 383 AAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLI 442
Query: 302 EAY----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
Y RL+++M GC+P+ YNI+++ +G+A
Sbjct: 443 SMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKA 483
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED- 155
+DL N + +L + DP + + L++ Q SL K E +E++ I D
Sbjct: 315 EDLYNEAKAKKLLR--DPAMFLK----LILMYVQQGSLEKALEI--VEVMKDFKIGVSDC 366
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ ++ Y E A V+ ++ + G P V Y S I+ + G KA +IF M
Sbjct: 367 IFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEM 426
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ Y+ +I++YGK + A++L +M+ C+PN+ Y L+ +
Sbjct: 427 EEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNL 486
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ E+++++++ I PD +Y +++ AY
Sbjct: 487 KQVEKLWKEMKRKKIAPDKVSYTSIISAY 515
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 18/225 (8%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK--- 182
+ Y + +HK + L +R Y +++AY G E+ +F E+
Sbjct: 194 MRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRIS 253
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
P S +Y + L K G +++E F+ M++ Y+ +I + + +
Sbjct: 254 VSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKL 313
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG--AGIEPDVY----- 295
A L+NE ++ K + + L+ + ++G E+A EI E ++ G+ ++
Sbjct: 314 AEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVN 373
Query: 296 ------AYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
Y A ++ Y + + GCEP + +Y ++AY R GL+
Sbjct: 374 GYATRRGYEAAVKVYEKL--IEDGCEPGQVTYASAINAYCRVGLY 416
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 128 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN +T L++ + G +
Sbjct: 188 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 247
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M G +PD+ +Y ++
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 307
Query: 326 DAYGRAG 332
D + G
Sbjct: 308 DGCCKEG 314
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L P TY L+ C G L++A + EM G
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 295
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT +I+ +S A
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAE 355
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 356 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 141 IRJAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 196
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P + L+ +C +G ++ A ++++M
Sbjct: 197 TYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQM 256
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A + M +P TYT +I+ K
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDL 316
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ EG +AE++ ++ G++PD Y +
Sbjct: 317 DSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMI 376
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 377 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C + A +F EM GL P+ V + + IDG K G
Sbjct: 186 MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGR 245
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI+++M P TY +I K A L +EM KP+ TYT
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTT 305
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ D Y AL+ +A +++ M +G
Sbjct: 306 LIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVG 365
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 366 LKPDARTYTMIINEFCKKG 384
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 13/232 (5%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAE 174
I + C+ ++ Y + ++ A Y +L++ C P + TYA + AYC GL KAE
Sbjct: 361 IGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAE 420
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
+F EM + G V Y+S I K G + A+ + +MK CQP+ Y +++ ++
Sbjct: 421 DIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMH 480
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
GKA KL+ EM+ K P+ +YT++++A+ + E+ E+ + + + G D
Sbjct: 481 GKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTID- 539
Query: 295 YAYNALM-----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAGLH 334
A+ +M E +L+ M + G D Y ++A AGL
Sbjct: 540 KAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQ 591
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 12/214 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K AE Y E + + + L+ Y G LEKA + M+ + + S ++ +
Sbjct: 312 KLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAI 371
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
++G + AV++++++ D C+P TY IN Y + A +F EM
Sbjct: 372 VNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGF 431
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------R 305
+ Y++L++ + + G ++A + +++ G +P+V+ YN LME + +
Sbjct: 432 DKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEK 491
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKC 338
L M PD+ SY ++ AY +A E KC
Sbjct: 492 LWKEMKRKKIAPDKVSYTSIISAYVKASEFE-KC 524
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 46/221 (20%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI-------------------- 196
Y +L ++ SG + ++ FR+MRK G+ +Y++ I
Sbjct: 263 YGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAK 322
Query: 197 -DGLLKG--------------GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
LL+ G+ +KA+EI + MK S + ++N Y
Sbjct: 323 AKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYE 382
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A+K++ ++ C+P TY + +NA+ R GL +AE+IF +++ G + V AY++L+
Sbjct: 383 AAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLI 442
Query: 302 EAY----------RLISRM-HMGCEPDRASYNIMVDAYGRA 331
Y RL+++M GC+P+ YNI+++ +G+A
Sbjct: 443 SMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKA 483
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED- 155
+DL N + +L + DP + + L++ Q SL K E +E++ I D
Sbjct: 315 EDLYNEAKAKKLLR--DPAMFLK----LILMYVQQGSLEKALEI--VEVMKDFKIGVSDC 366
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ ++ Y E A V+ ++ + G P V Y S I+ + G KA +IF M
Sbjct: 367 IFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEM 426
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ Y+ +I++YGK + A++L +M+ C+PN+ Y L+ +
Sbjct: 427 EEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNL 486
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ E+++++++ I PD +Y +++ AY
Sbjct: 487 KQVEKLWKEMKRKKIAPDKVSYTSIISAY 515
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 18/225 (8%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-- 183
+ Y + +HK + L +R Y +++AY G E+ +F E+
Sbjct: 194 MRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRIS 253
Query: 184 -GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
P S +Y + L K G +++E F+ M++ Y+ +I + + +
Sbjct: 254 DSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKL 313
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG--AGIEPDVY----- 295
A L+NE ++ K + + L+ + ++G E+A EI E ++ G+ ++
Sbjct: 314 AEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVN 373
Query: 296 ------AYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
Y A ++ Y + + GCEP + +Y ++AY R GL+
Sbjct: 374 GYATRRGYEAAVKVYEKL--IEDGCEPGQVTYASAINAYCRVGLY 416
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 89/226 (39%), Gaps = 30/226 (13%)
Query: 91 PTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC 150
P +T LI V+L KKWD I+L+S + +D
Sbjct: 116 PQKSTLRHLIRYLVRL---KKWDLILLVS-----------------------RDFVDFGV 149
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P DT + L+ + C+ G K E+ + + + + + G K + +
Sbjct: 150 CPDRDTCSKLVSS-CVRGRKFKVVKSLLEVFERNSGVAMTAFEAAMRGYNKLHMHKSTIM 208
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP---NICTYTALVN 267
+FQR+K + + Y ++ Y K S ++LFNE+ S + Y L
Sbjct: 209 VFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISDSTPFSTKIYGILCE 268
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG 313
+ A+ G E+ E F ++ GI D Y+AL+ + I + +
Sbjct: 269 SLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLA 314
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +L++ +C G L A+ +F EM GL P + Y + I G LK GNP KA +
Sbjct: 415 PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MK + P TY ++IN K A +L +MR P+ TYT++++A
Sbjct: 475 KEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLI 534
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
GL +AEE+F + GI P V Y L+ +Y + R+ G P+ +
Sbjct: 535 SGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVIT 594
Query: 321 YNIMVDAYGRAGLHEGKCSYSL 342
YN ++ YG + +Y+L
Sbjct: 595 YNALI--YGLCKENMMDVAYNL 614
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 11/166 (6%)
Query: 172 KAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
KA + EM+ G PP + YN I+GL K GN A E+ Q+M+ + P TYT +I
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
+ + + A ++F++M P++ TYT L++++A G + A++ F+++Q G+
Sbjct: 530 HAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589
Query: 292 PDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVD 326
P+V YNAL+ AY L + M G P++ +Y I+++
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ C G + A + ++MR G+ P V Y S I L G +KA E+
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M + PS TYT++I+ Y + A K F+EM+ PN+ TY AL+ +
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
E + + A +F +++ G+ P+ Y Y L+
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 13/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + +A + EL +P+ TY L+ C +G L+ A+ + +M K+G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V + + G + GN A E+F M +P YT I K A
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ EM++ P++ TY L+N + G ++A E+ ++++ GI PD Y +++ A+
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532
Query: 305 RLIS------------RMHMGCEPDRASYNIMVDAYGRAG 332
LIS + G P +Y +++ +Y G
Sbjct: 533 -LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRG 571
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ + +K + +K + +++++ +P +LK ++ + E V+ M K
Sbjct: 142 LLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC 201
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ P+ V +N+ +D K G +AVE+ M+ C P+ +Y +++N + A
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+L +M K + TY L+ F ++ + EEA ++ ++ G G P V YN +M
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A R + M + PD SYN ++ Y R G
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLG 361
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + +K + ++A E+L +PT TY ++ + C G + A M
Sbjct: 283 LIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED 342
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V YN+ I G + GN +A+ +F ++ PS TY +I+ + +A
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAK 402
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+ ++M H P++ T+T LV F + G A+E+F+++ G++PD AY +
Sbjct: 403 GMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGE 462
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A+ + M G PD +YN++++ + G
Sbjct: 463 LKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLG 501
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY ++ A+ +SGLL KAE VF +M K G+ PS V Y I G A +
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNA 268
F M+ P+ TY +I YG ++ M A LF EM S PN TYT L+N
Sbjct: 579 YFDEMQDKGVSPNVITYNALI--YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINE 636
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA----YRLISRMHMGCEP 316
+ ++A ++++ + I+PD ++ALM+ Y+L++ + + P
Sbjct: 637 NSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENLP 688
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 87 DSLPPTHATWDDLIN---------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
+ PP T++ LIN + +L + + IV +I A+ L +K
Sbjct: 481 EGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRK 540
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + ++L P+ TY +L+ +Y + G L+ A+ F EM+ G+ P+ + YN+ I
Sbjct: 541 AEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIY 600
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K A +F M+ P+ TYT++IN ALKL+ +M + KP
Sbjct: 601 GLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKP 660
Query: 258 NICTYTALVNAFARE 272
+ CT++AL+ +++
Sbjct: 661 DSCTHSALMKHLSKD 675
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ +C + E+A + REM G P+ V YN+ + L + G A M
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P +Y +I Y + AL LF+E+RS P++ TY L++ R G
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
+ A+ + + + G+ PDV + L+ + + + M E
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKE 438
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P + +Y +L+ G ++A+ + +M GL SA YN I G K ++A
Sbjct: 238 CDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAN 297
Query: 210 EIFQRMKRDCCQPSTETY-TLMINL--YGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
++ + M P+ TY T+M +L G+ S A + + M + P++ +Y L+
Sbjct: 298 DLRREMLGRGALPTVVTYNTIMYSLCRLGRVSD---ARRYLDVMVNEDLMPDLVSYNTLI 354
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCE 315
++R G EA +F +L+ + P V YN L++ + + G
Sbjct: 355 YGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLC 414
Query: 316 PDRASYNIMVDAYGRAG 332
PD ++ I+V + + G
Sbjct: 415 PDVVTFTILVRGFCQMG 431
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+ S + L+I ++ K L +F +M ++ P++ ++ + + E EE
Sbjct: 134 EVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEE 193
Query: 281 IFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAYG 329
++ + I P + +N +M+ A ++ M M GC+P+ SYN++V+ G
Sbjct: 194 VYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN--G 251
Query: 330 RAGLHEGKCSYSLVE 344
+G E + L+E
Sbjct: 252 LSGKGEFDRAKELIE 266
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 85 AFDSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLE 144
F+SL + ++ N+ Q++ +V S LLI+AYG+ ++A + E
Sbjct: 285 TFNSLMSFETEYKEVSNIYDQMQRAGLKPDVVSYS----LLIKAYGKARREEEALAVFEE 340
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+LD+ PT +Y +LL A+ +SGL+E+A VFR MR++ + P Y + + +
Sbjct: 341 MLDAGVRPTRKSYNILLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTTMVLAYVNASE 400
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A + F+R+K D +P+ Y ++ Y K + ++++ MR +PN YT
Sbjct: 401 MNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQGVEPNQTIYTT 460
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+++A R A F++++ G PD A N L+
Sbjct: 461 IMDAQGRNSDFGNAVIWFKEMEARGYPPDQKAKNILL 497
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 55/278 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI---PTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+++++ + +K+AE + +LL+ + P + + +++ Y +G +A +F +M
Sbjct: 215 IILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQM 274
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAV-EIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ G+P S V +NS L+ K V I+ +M+R +P +Y+L+I YGKA +
Sbjct: 275 SERGIPLSTVTFNS----LMSFETEYKEVSNIYDQMQRAGLKPDVVSYSLLIKAYGKARR 330
Query: 240 SFMALKLFNEM-----------------------------------RSHKCKPNICTYTA 264
AL +F EM R H+ +P++C+YT
Sbjct: 331 EEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTT 390
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-G 313
+V A+ AE+ F +++ G++P+V Y LM+ Y R+ RM + G
Sbjct: 391 MVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQG 450
Query: 314 CEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
EP++ Y ++DA GR G E+ + YP
Sbjct: 451 VEPNQTIYTTIMDAQGRNSDF-GNAVIWFKEMEARGYP 487
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 52/232 (22%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+E + +L+ AY G +AE V + M K G PS + ++ +G +KA +F
Sbjct: 139 SEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVF 198
Query: 213 QRMKRDCCQPSTETYT--------------------------------------LMINLY 234
+RM+ QPS TY +MI +Y
Sbjct: 199 RRMQTSGPQPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMY 258
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
KA A KLF +M + T+ +L+ +F E +E I++Q+Q AG++PDV
Sbjct: 259 KKAGDYAQARKLFAQMSERGIPLSTVTFNSLM-SFETE--YKEVSNIYDQMQRAGLKPDV 315
Query: 295 YAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAGLHE 335
+Y+ L++AY R + G P R SYNI++DA+ +GL E
Sbjct: 316 VSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVE 367
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%)
Query: 120 CVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE 179
C ++ AY S AE + + + P Y L+K Y LEK V+
Sbjct: 386 CSYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYER 445
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
MR G+ P+ +Y + +D + + AV F+ M+ P + ++++L
Sbjct: 446 MRIQGVEPNQTIYTTIMDAQGRNSDFGNAVIWFKEMEARGYPPDQKAKNILLSL 499
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 126 IEAYGQKSLHK-----KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
I +Y KSL K +A + ++ +S D + +L+ C SG +A + M
Sbjct: 360 IYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMM 419
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ G+ +YN L K +F +MK + P TY +MI+ YG+
Sbjct: 420 PEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLV 479
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A LF +M + CKP++ TY +L+N + G +EA +F+++Q G PDV+ Y+ L
Sbjct: 480 DKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSIL 539
Query: 301 MEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+E + +++ M GC P+ +YNI++D R G
Sbjct: 540 IECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHG 582
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ +Y GL++KA +F +M P + YNS I+ L K G+ +A +
Sbjct: 461 PDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHML 520
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY+++I +GK++K MA LF +M + C PN+ TY L++ R
Sbjct: 521 FKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLER 580
Query: 272 EGLCEEAEEIFEQLQGAGIEPD 293
G EA + +E ++ G+ PD
Sbjct: 581 HGKTAEAHKHYETMKQQGLTPD 602
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+A+ S + K V+ EMR+ G YN +D L K G +A ++F+ M
Sbjct: 188 TYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDM 247
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K+ C+P TYT++I + G+A K+ L F+EM S C N+ Y L+ A + +
Sbjct: 248 KQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMV 307
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
++ + ++ G +P+ + Y+ ++ ++H
Sbjct: 308 DKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLH 343
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 43/261 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYAL------------------------- 159
LIEA G+ + K F ++++ C P + TY++
Sbjct: 297 LIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYM 356
Query: 160 -------LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
L+K+ SG + +A VF +M + S ++ L G +A+++
Sbjct: 357 NKSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLL 416
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
M Y ++ + GK + LF++M+++ P++ TY +++++ R
Sbjct: 417 HMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRV 476
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASY 321
GL ++A +FE + + +PDV YN+L+ EA+ L M G PD +Y
Sbjct: 477 GLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTY 536
Query: 322 NIMVDAYGRAGLHEGKCSYSL 342
+I+++ +G++ + C+ L
Sbjct: 537 SILIECFGKSNKVDMACNLFL 557
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 53/258 (20%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A + + +A + ++ C P TY +L++ +G K + F EM
Sbjct: 226 MLLDALAKSGMVDQAYQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSK 285
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G + + YN+ I+ L K K + + +M CQP+ TY++ +++ K +
Sbjct: 286 GCALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQ---- 341
Query: 244 LKLFNEMRSHKCKP--NICTYTALVNAFAREGLCEEAEEIFEQLQGA------------- 288
L NE+ C N Y+ LV + ++ G EA +F Q+ +
Sbjct: 342 LHRLNEVLD-ICDRYMNKSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSML 400
Query: 289 ----------------------GIEPDVYAYNALMEAY----------RLISRMHM-GCE 315
G+ DV YN + A L +M G
Sbjct: 401 EVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIA 460
Query: 316 PDRASYNIMVDAYGRAGL 333
PD +YNIM+ +YGR GL
Sbjct: 461 PDLFTYNIMISSYGRVGL 478
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+GL + Y + L+ K E+++ M+R Y ++++ K+
Sbjct: 179 KWGLRLNGYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVD 238
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +M+ C+P+ TYT L+ R G + F+++ G ++ AYN L+
Sbjct: 239 QAYQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLI 298
Query: 302 EA-----------YRLISRMHMGCEPDRASYNIMVDAYGRAG-LH 334
EA + L + GC+P++ +Y+I +D + G LH
Sbjct: 299 EALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLH 343
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I +YG+ L KA + ++ S C P TY L+ +G L++A +F+EM++
Sbjct: 468 IMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEK 527
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P Y+ I+ K A +F M + C P+ TY ++++ + K+ A
Sbjct: 528 GYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEA 587
Query: 244 LKLFNEMRSHKCKPNICTYTAL 265
K + M+ P+ T + L
Sbjct: 588 HKHYETMKQQGLTPDSITCSIL 609
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI G+ +A + E+ + P TY++L++ + S ++ A +F +M G
Sbjct: 504 LINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEG 563
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
P+ V YN +D L + G +A + ++ MK+ P + T +++ L ++ ++
Sbjct: 564 CIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSILERLESRSQRT 619
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 37/282 (13%)
Query: 83 WDAFDSLP-----PTHATWDDLINVSVQ------------LRLNKK---WDPIVLMSCVS 122
W +D + P H T +I V + R+N+K W VL +
Sbjct: 262 WKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGA--- 318
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI+++ + L +A E+ Y L+ AY S +E+AE +F EM+
Sbjct: 319 --LIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKA 376
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK-SF 241
G+ P++ YN +D + P+ + M+ +P+ ++YT +I+ YG+ K S
Sbjct: 377 KGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSD 436
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
MA F M+ KP +YTAL++A++ G E+A FE ++ GI+P + Y AL+
Sbjct: 437 MAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALL 496
Query: 302 EAYRL---------ISRMHMG--CEPDRASYNIMVDAYGRAG 332
+A+R I ++ + E R ++NI++D + + G
Sbjct: 497 DAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQG 538
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AYG QK + A +L + PT +Y L+ AY + G EKA F M++
Sbjct: 424 LISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKRE 483
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS Y + +D + G+ Q ++I++ M D + + T+ ++++ + K A
Sbjct: 484 GIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEA 543
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ E +P + TY L+NA+AR G ++ +++ ++PD Y+ ++ A
Sbjct: 544 RDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYA 603
Query: 304 Y 304
Y
Sbjct: 604 Y 604
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 47/188 (25%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K++C GL +A + EM K G+ +A+VYN+ +D
Sbjct: 319 LIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDA--------------------- 357
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
Y K+++ A LF EM++ P TY L++A++R E E
Sbjct: 358 --------------YSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIE 403
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRM------------HMGCEPDRASYNIMVDA 327
+ ++Q G+EP+V +Y L+ AY +M +G +P SY ++ A
Sbjct: 404 NLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHA 463
Query: 328 YGRAGLHE 335
Y G HE
Sbjct: 464 YSVGGWHE 471
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+LL +G+ + + R + K +YNS I GL G A +++ M+
Sbjct: 211 SLLFPMLGRAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMET 270
Query: 218 DCCQPSTETYTLMINLYGKASKSFM-ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +P T ++MI + K S A + F M K ++ AL+ +F EGL
Sbjct: 271 NNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKN 330
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMV 325
EA I +++ GI + YN LM+AY +R+ G P A+YNI++
Sbjct: 331 EALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILM 390
Query: 326 DAYGR 330
DAY R
Sbjct: 391 DAYSR 395
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 32/272 (11%)
Query: 90 PPTHATWDDLINVSVQLRLNKKWDPIVLM--SCVSILLIEAYGQKSL---------HKKA 138
PP+ LI+ LR +++D +V + VS L++ + S H
Sbjct: 39 PPSEPACSTLID---NLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSF 95
Query: 139 EFTYLELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREM-RKYG-LPPSAVVYNSY 195
F+ L L+ R L+LK +C SG +KA ++F +M R Y + P V YN+
Sbjct: 96 AFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL 155
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
++G K +A +F+ MK+ C+P+ TY+++I+ Y K+ + L L EM
Sbjct: 156 VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG 215
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
K ++ Y++L++AF EG E E+F+++ + P+V Y+ LM EA
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREAS 275
Query: 305 RLISRMHM-GCEPDRASYNIMVDAY---GRAG 332
++ M G PD +Y ++ D GRAG
Sbjct: 276 EMLKDMTARGVRPDVVAYTVLADGLCKNGRAG 307
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY++L+ YC SG + + + EM + GL VY+S I G+ +
Sbjct: 181 CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGR 240
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+F M R P+ TY+ ++ G+ + A ++ +M + +P++ YT L +
Sbjct: 241 ELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+ G +A ++ + + G EP YN ++ +A+ ++ M G +PD
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360
Query: 319 ASYNIMVDAYGRAG-LHEG 336
+YN ++ AG +HE
Sbjct: 361 VTYNTLLKGLCGAGKIHEA 379
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++++ C +L A +F +M+ G+ P+ + YN+ + L + + ++A +
Sbjct: 465 PNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSL 524
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ M+ ++ ++I+ KA A +L +EM P+ T++ L+N F++
Sbjct: 525 FQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSK 584
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMHMGCEPD 317
G+ +EA ++E++ G P V +++L++ Y ++IS +H + D
Sbjct: 585 LGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKD 637
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L++ C G + A + M + GL + V YN I+G L +A+++++
Sbjct: 403 LIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESG 462
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
P++ TY++MIN K +A LF +M+ +P + Y AL+ + RE E+A
Sbjct: 463 FSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQAR 522
Query: 280 EIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAY 328
+F++++ DV ++N +++ A L+S M M PD +++I+++ +
Sbjct: 523 SLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRF 582
Query: 329 GRAGLHEGKCSYSLVELSVKHYPA 352
+ G+ + +S H P
Sbjct: 583 SKLGMLDEAMGLYEKMVSCGHVPG 606
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 125 LIEAY-GQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A+ G+ + E + E+L + P TY+ L++ +G +A + ++M
Sbjct: 226 LISAFCGEGDIETGREL-FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR 284
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V Y DGL K G A+++ M + +P T TY +++N K + A
Sbjct: 285 GVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDA 344
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL--QGAGIEPDVYAYNALM 301
+ M KP+ TY L+ G EA ++++ L + ++PDV+ N L+
Sbjct: 345 FGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLI 404
Query: 302 E----------AYRLISRM-HMGCEPDRASYNIMVDAY 328
+ A R+ S M MG + + +YN +++ Y
Sbjct: 405 QGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGY 442
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 18/234 (7%)
Query: 108 LNKKWDP-IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
L +K P +V SC L++ G+ ++A ++ P Y +L C
Sbjct: 247 LRRKVSPNVVTYSC----LMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCK 302
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+G A V M + G P + YN ++GL K A + + M + +P T
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHK--CKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
Y ++ A K A+ L+ + S K KP++ T L+ +EG +A I
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSS 422
Query: 285 LQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRASYNIMVDA 327
+ G++ ++ YN L+E Y +LI + + G P+ +Y++M++
Sbjct: 423 MVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMING 476
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + A + ++ DS PT Y L+ + C LE+A ++F+EMR
Sbjct: 472 VMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV 531
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
V +N IDG LK G+ + A E+ M P T++++IN + K A
Sbjct: 532 NHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEA 591
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ L+ +M S P + + +L+ + +G E+ + Q+ + D
Sbjct: 592 MGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLD 641
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A+ E+ +P T+++L+ + G+L++A ++ +M G P VV++S
Sbjct: 554 KSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSL 613
Query: 196 IDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLM 230
+ G G +K + + +M +D S T T++
Sbjct: 614 LKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTIL 649
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + ++ M
Sbjct: 139 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYN----------ALMEAYRLISRMHM-GCEPDRASYNIMV 325
A E+++Q+ + PD+ YN AL +A+ L+ M M G +PD+ +Y ++
Sbjct: 259 LAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGCCKEG 325
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+E+
Sbjct: 204 PDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEV 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M P TY +I YG K + A L +EM KP+ TYT L++
Sbjct: 264 YKQMLSQSLLPDLITYNTLI--YGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGC 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG + A E +++ I D AY AL+ +A +++ M G +PD
Sbjct: 322 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDT 381
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 382 GTYTMIINEFCKKG 395
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L LN+ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A V+++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G +A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 328 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L +A + EM G
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+ EM S KP+ TYT ++N F ++G + ++ +++Q G P V
Sbjct: 367 KMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSV 416
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 175 AVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY 234
A + E+ + G P S +N + K G+ + A +F + + +PS +Y ++N Y
Sbjct: 122 AFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGY 181
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ KL + M + +P++ TY+ L+N +E ++A E+FE++ G+ P+
Sbjct: 182 IRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNG 241
Query: 295 YAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKG 290
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
S V+ LL G K + AE + L R P T+ ++ C G L KA V +
Sbjct: 157 SSVNALLAGLVGAKRVDL-AEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215
Query: 179 EMRKYGLPPSAVVYNSYIDGLLK---GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+++ +GL PS YNS IDG K GN + + M P+ T+ ++IN Y
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYC 275
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K S + A+++F EM+ ++ TY +L++ EG EE ++ E+++ G+ P+
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335
Query: 296 AYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHE 335
+ +++ + M EPD YNI++D Y R G E
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 46/231 (19%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++++ PT T+ +L+ YC + A VF EM++ G+ S V YNS I GL G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 204 NPQKAVEIFQRMK---------------RDCC--------------------QPSTETYT 228
++ V++ + M+ + C +P Y
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
++I++Y + K A+ + M PN+ TY L+ F+R G A + ++++
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Query: 289 GIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
GIE DV YN L+ +A +L+ M +G EP+ +YN ++ +
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +L+ Y G +E A AV M K G+ P+ YN I G + G+ + A +
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
MK + TY ++I + A+KL +EM +PN TY ++ F
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+G + A EI +++ +V YN ++ + I +M
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKM 525
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ A C G + KA + EM + GL P+ + YN+ I G GN + A EI RM
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ + + TY + I + + K A L NEM PN TY + +EG+
Sbjct: 501 EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMM 555
Query: 276 EEA 278
E+
Sbjct: 556 EKG 558
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 5/166 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ + SG A + EM++ G+ V YN I L G +KAV++
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M +P+ TY +I + A ++ M + + N+ TY + F +
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPD 317
G +EA ++ ++ + P+ Y + E M G PD
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-----MEKGYTPD 562
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+PST + ++ A + +A K F + P+I T+ +++ R G +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 281 IFEQLQGAGIEPDVYAYNALMEAY-------------RLISRM-HMGCEPDRASYNIMVD 326
+ + ++ G+ P V YN+L++ Y L+ M G P ++ ++++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 327 AY 328
Y
Sbjct: 273 GY 274
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 16/224 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++++ + L ++A E+ Y L+ AY S +E+ E +F EMR G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK-SFMA 243
L PSA YN +D + P + + M+ +P+ ++YT +I+ YG+ K S MA
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMA 469
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA---- 299
F M+ KP+ +YTAL++A++ G E+A FE++ GI+P V Y +
Sbjct: 470 ADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 300 ---------LMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLH 334
LME ++L+ R + + R +YN ++D + + GL+
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKI--KGTRITYNTLLDGFAKQGLY 571
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
++D + L+K++C GL E+A + EM K G+ + +VYN+ +D K + ++ +F
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR- 271
M+ +PS TY ++++ Y + + + L EM +PN+ +YT L++A+ R
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRT 462
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------------MGCEPDRA 319
+ + + A + F +++ G++P ++Y AL+ AY +S H G +P
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYS-VSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 320 SYNIMVDAYGRAG 332
+Y ++DA+ R+G
Sbjct: 522 TYTSVLDAFRRSG 534
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS-GLLEKAEAVFREMRK 182
+L++AY ++ E E+ D P +Y L+ AY + + + A F M+K
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL PS+ Y + I G +KA F+ M ++ +PS ETYT +++ + ++ +
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
++++ M K K TY L++ FA++GL EA ++ + G++P V YN LM
Sbjct: 539 LMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMN 598
Query: 303 AY----------RLISRM-HMGCEPDRASYNIMVDAYGR 330
AY +L+ M + +PD +Y+ M+ A+ R
Sbjct: 599 AYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 176 VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYG 235
+F +M + G+ S V+ + G ++A+ I M++ + +T Y +++ Y
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
K++ LF EMR KP+ TY L++A+AR + E + +++ G+EP+V
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 296 AYNALMEAYRLISRM------------HMGCEPDRASYNIMVDAYGRAGLHE 335
+Y L+ AY +M +G +P SY ++ AY +G HE
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LLL +S L +K E FR++R +YN+ I GL A E+++ M
Sbjct: 256 YILLL----LSNLPDKEE--FRDVR---------LYNAAISGLSASQRYDDAWEVYEAMD 300
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMAL-KLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P T ++I KA +S + ++F +M K + + LV +F EGL
Sbjct: 301 KINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLK 360
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMH-MGCEPDRASYNIM 324
EEA I +++ GI + YN LM+AY L + M G +P A+YNI+
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL 420
Query: 325 VDAYGR 330
+DAY R
Sbjct: 421 MDAYAR 426
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP TY++LL+ + + L KA +FREM G P V Y +D L K G +AV
Sbjct: 177 IPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVG 236
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + M C+P++ Y+++++ YG ++ A+ F +M ++ + ++ Y AL+ AF
Sbjct: 237 IVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFC 296
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRAS 320
+ + A + ++ GI P+ N ++ EA+R+ RM C+PD +
Sbjct: 297 KVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADT 356
Query: 321 YNIMVDAY 328
Y +M+ +
Sbjct: 357 YTMMIKMF 364
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+T+ ++++ Y S +++A F M KY +PP+ +NS + L K N KA EIF
Sbjct: 112 ETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNG 171
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
MK D P ++TY++++ +GKA A ++F EM C P+I TY +V+ + G
Sbjct: 172 MK-DQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGR 230
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNI 323
+EA I +++ + +P + Y+ L+ Y + +R+ E D A YN
Sbjct: 231 VDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNA 290
Query: 324 MVDAYGRAG 332
++ A+ +
Sbjct: 291 LIGAFCKVN 299
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 1/177 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG ++ + A +T+L++ + Y L+ A+C L+ A V EM
Sbjct: 255 VLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCK 314
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P++ N ++ L+ G+ +A +F+RM + C P +TYT+MI ++ + K MA
Sbjct: 315 GIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIK-VCDPDADTYTMMIKMFCENDKLEMA 373
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
LK++ MR + P++ T++ L+N ++G +A + E++ GI P + L
Sbjct: 374 LKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKL 430
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 116/266 (43%), Gaps = 19/266 (7%)
Query: 73 VQREVDSNTIWDAFDSLPPTHATWDDLIN--------VSVQLRLNKKWDPIVLMSCVSIL 124
V+ V + I + +D +PP A ++ L++ V Q N D + S +
Sbjct: 127 VKEAVYTFNIMEKYD-VPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSI 185
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+E +G+ KA + E++D C P TY +++ C +G +++A + +EM
Sbjct: 186 LLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSV 245
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P++ +Y+ + + AV F M+R+ + Y +I + K +K A
Sbjct: 246 CKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAY 305
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ NEM +PN T ++N+ G +EA +F ++ +PD Y +++
Sbjct: 306 RVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIK-- 362
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGR 330
M CE D+ + V Y R
Sbjct: 363 -------MFCENDKLEMALKVWKYMR 381
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
Y++ I+ L K Q ++ +M R + ET+ +++ Y ++ K A+ FN M
Sbjct: 80 YHTMIESLAKIRQYQIMWDLVNKM-RSLKILNVETFCIIMRKYARSQKVKEAVYTFNIME 138
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
+ PN+ + +L++A + +A+EIF ++ I PD Y+ L+E +
Sbjct: 139 KYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFI-PDSKTYSILLEGWGKAPNLP 197
Query: 305 --RLISR--MHMGCEPDRASYNIMVDAYGRAG 332
R I R + MGC+PD +Y IMVD +AG
Sbjct: 198 KAREIFREMVDMGCDPDIVTYGIMVDILCKAG 229
>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + LK + L++AE +F EM + G+ P + +++ I P KAVE F++M
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMP 238
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P TY+ MI+ YG+A MALKL++ R+ K + + T++ L+ + G +
Sbjct: 239 EFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFD 298
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
++E+++ G++P++ YN L++A R + G +P +Y ++
Sbjct: 299 GCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALL 358
Query: 326 DAYGRA 331
AYGRA
Sbjct: 359 RAYGRA 364
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L++ Y MSG + V+ EM+ G+ P+ V+YN+ +D + + P +A I++ M
Sbjct: 283 TFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEM 342
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR---SHKCKPNICTYTALVNAFARE 272
+ QPS TY ++ YG+A + AL ++ EM+ S C P+ T+++L+ ++
Sbjct: 343 TNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCS 402
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G EAE + + AG EP+++ +L++ Y
Sbjct: 403 GKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCY 434
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE + E+L+ P T++ ++ +S L KA F +M ++G P V Y++ I
Sbjct: 194 RAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMI 253
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
D + GN A++++ R + + + T++ +I +YG + L ++ EM++ K
Sbjct: 254 DAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVK 313
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLIS 308
PN+ Y L++A R +A+ I++++ G++P Y AL+ AY LI
Sbjct: 314 PNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIV 373
Query: 309 RMHM------GCEPDRASYNIMVDAYGRAG 332
M C PD +++ ++ Y +G
Sbjct: 374 YKEMKEKGSGNCMPDSWTFSSLITIYSCSG 403
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVV-YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A F RK P V+ YN + K N +A ++F M +P T++
Sbjct: 157 ETALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFST 216
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ +S A++ F +M C P+ TY+A+++A+ R G + A +++++ +
Sbjct: 217 IISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEK 276
Query: 290 IEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
D ++ L+ Y + +G +P+ YN ++DA GRA
Sbjct: 277 WRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRA 329
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLD---SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
L+ AYG+ + A Y E+ + C+P T++ L+ Y SG + +AEA+ M
Sbjct: 357 LLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAML 416
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ G P+ V S I K + V F R+ P M+N+ ++ K
Sbjct: 417 EAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPK 474
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 137 KAEFTY--LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
KAE Y + L++ R P TY++L+ ++C SG L+ A + F M + G+ + YNS
Sbjct: 383 KAELLYSNMSLMNLR--PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I+G K G+ A +F M +P+ T+T +I+ Y K + A KL+N+M +
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AY 304
PN+ T+TAL++ EA E+F++L I+P YN L+E A+
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAF 560
Query: 305 RLISRMHM-GCEPDRASYNIMVDAYGRAG 332
L+ MH G PD +Y ++ G
Sbjct: 561 ELLEDMHQKGLVPDTYTYRPLISGLCSTG 589
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ Y ++ KKA + ++ C P TY L+ C +G +++A +F+ M+
Sbjct: 686 MIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN 745
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+PP+++ Y ++D L K GN ++A+ + M + +T T+ ++I + K + A
Sbjct: 746 VPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLL-ANTVTHNIIIRGFCKLGRFHEAT 804
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+ +EM + P+ TY+ L+ + R G + ++++ + G+EPD+ AYN L+
Sbjct: 805 KVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLI 861
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P Y L+ + C G L+KAE ++ M L P+ + Y+ ID + G A+
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F RM +D + Y +IN K A LF EM + +P T+T+L++ +
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRA 319
++ ++A +++ ++ GI P+VY + AL+ ++M E P
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEV 541
Query: 320 SYNIMVDAYGRAG 332
+YN++++ Y R G
Sbjct: 542 TYNVLIEGYCRDG 554
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E Y+ LL YC G L +A + EM + G+ V + IDG LK + + ++ +
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M +P YT MI+ Y K A + ++ M + +C PN+ TYTAL+N + G
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAG 729
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNI 323
+ A +F+++Q A + P+ Y + EA L M G + ++NI
Sbjct: 730 EMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNI 789
Query: 324 MVDAYGRAG-LHEG 336
++ + + G HE
Sbjct: 790 IIRGFCKLGRFHEA 803
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + +KA Y +++D+ P T+ L+ C + + +A +F E+ +
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YN I+G + G KA E+ + M + P T TY +I+ + A
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
+++ K N Y+AL++ + +EG EA ++ GI D+ + L++
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655
Query: 304 ---------YRLISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ L+ MH G PD Y M+D Y + G
Sbjct: 656 LKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEG 694
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE ++E+ + PT T+ L+ YC ++KA ++ +M G+ P+ + + I
Sbjct: 454 AESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALIS 513
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL +A E+F + +P+ TY ++I Y + K A +L +M P
Sbjct: 514 GLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHMG 313
+ TY L++ G +A++ + L ++ + Y+AL+ Y RL+ +
Sbjct: 574 DTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSAS 633
Query: 314 CEPDRASYNI 323
CE + N+
Sbjct: 634 CEMIQRGINM 643
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 11/184 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C E + EM + G P+ + +DGL K G A E+ ++
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV 356
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R P+ Y +IN K A L++ M +PN TY+ L+++F R G
Sbjct: 357 GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRL 416
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIM 324
+ A F+++ GI VYAYN+L+ I + G EP ++ +
Sbjct: 417 DVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSL 476
Query: 325 VDAY 328
+ Y
Sbjct: 477 ISGY 480
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PTE + L+ G ++ A + ++ ++G P+ VYN+ I+ L KGG+ KA +
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELL 387
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +P+ TY+++I+ + ++ + +A+ F+ M + Y +L+N +
Sbjct: 388 YSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCK 447
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G AE +F ++ G+EP + +L+ Y
Sbjct: 448 FGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + ++++ C +A+ R M G S V YN I GL KG +AVE+
Sbjct: 223 PDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEV 282
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ + TY ++ + + + ++L +EM P + LV+ +
Sbjct: 283 KRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRK 342
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
+G ++A E+ ++ G P+++ YNAL+ +A L S M M P+ +
Sbjct: 343 QGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGIT 402
Query: 321 YNIMVDAYGRAGLHEGKCSY 340
Y+I++D++ R+G + SY
Sbjct: 403 YSILIDSFCRSGRLDVAISY 422
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 16/212 (7%)
Query: 135 HKKAEFTYLELLDS--RC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
H K F++ LDS RC + + LL++ Y +S + A + + M L P
Sbjct: 135 HPKCVFSHF--LDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRT 192
Query: 192 YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
++ ++GLLK E+F +P T + ++ + A + M
Sbjct: 193 LSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWME 252
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY------- 304
++ +I TY L++ + EA E+ L G G+ DV Y L+ +
Sbjct: 253 ANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFE 312
Query: 305 ---RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+L+ M +G P A+ + +VD + G
Sbjct: 313 AGIQLMDEMVELGFSPTEAAVSGLVDGLRKQG 344
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%)
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
LL+ +P+ F + C ST + L++ Y +S+ F A+ + M ++ P
Sbjct: 130 LLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPE 189
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ T +AL+N + E+F++ AG+ PD Y +A++ +
Sbjct: 190 VRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRS 234
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + +A E+ ++ P TY+ L+ YC SG + + ++ M
Sbjct: 789 IIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNR 848
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
GL P V YN I G G KA E+ M R P +
Sbjct: 849 GLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 88/156 (56%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
RC+P TY+ L+ A C G ++A+ EM + P +V+Y+++I G K G A
Sbjct: 514 RCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLA 573
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
V++ + M++ C+PST TY L+I + + S LKL +EM+ PN+ TY +L+ +
Sbjct: 574 VKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKS 633
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F G+ +A + +++ I P++ ++ L++A+
Sbjct: 634 FCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAF 669
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + T+ ++L +C +G++++A + MR G YN ++ GL++ G +A E+
Sbjct: 284 PDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQEL 343
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + QP++ TY ++++ K K+F K+ + ++S P++ TYT+L++A+
Sbjct: 344 LREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCS 403
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG A I +++ G P+ + YN L+ EA RL+ RM G D AS
Sbjct: 404 EGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTAS 463
Query: 321 YNIMVDAYGR 330
NI++D R
Sbjct: 464 CNIIIDGLCR 473
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
++Y L +G++ +A+ + REM G+ P++ YN +DGL K G ++
Sbjct: 322 ESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDF 381
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
+K P TYT +++ Y + A ++ +EM C PN TY L+ + + G
Sbjct: 382 VKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGR 441
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
EAE + E++ G D + N +++ +++ M + +N A GR G
Sbjct: 442 ITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLG 499
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 34/208 (16%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL AYC G A + EM + G P++ YN + L K G +A +
Sbjct: 389 PDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERL 448
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM--------------------- 250
+RM T + ++I+ + +K MA+ + + M
Sbjct: 449 LERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTD 508
Query: 251 --RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---- 304
S +C P+ TY+ LV+A +EG +EA++ ++ G I PD Y+ + Y
Sbjct: 509 SSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHG 568
Query: 305 ------RLISRMH-MGCEPDRASYNIMV 325
+++ M GC+P +YN+++
Sbjct: 569 KTSLAVKVLRDMEKKGCKPSTRTYNLLI 596
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 143 LELLDSRCIPTEDTYA--LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
L +LDS +PT + ++ +C G +++AE + MR GL P+ V +N+ I L
Sbjct: 201 LGVLDS--MPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALC 258
Query: 201 KGGNPQKAVEIFQRMK----RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K G A IF M+ R +P T+ +M++ + +A A L + MR
Sbjct: 259 KAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFL 318
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +Y ++ R G+ EA+E+ ++ G++P+ Y YN +++
Sbjct: 319 RRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDG 365
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y LL A + E++++++ G P N + L G + A +F M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + ++ ++ Y +A +S AL + + M + N+ +V F REG
Sbjct: 177 P----ERNEFSFGILARGYCRAGRSMDALGVLDSMPTM----NLVVCNTVVAGFCREGQV 228
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRMHMGCE-----PDRAS 320
+EAE + E+++ G+ P+V +NA +++AYR+ + M E PD+ +
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVT 288
Query: 321 YNIMVDAYGRAGL 333
+++M+ + AG+
Sbjct: 289 FDVMLSGFCEAGM 301
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A ++ +A+ LE++ P Y + YC G A V R+M K G
Sbjct: 525 LVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKG 584
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS YN I G + N + +++ MK P+ TY +I + + A+
Sbjct: 585 CKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAM 644
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
L +EM ++ PNI ++ L+ AF + A+ +F+
Sbjct: 645 PLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD 683
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 89/238 (37%), Gaps = 58/238 (24%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AY + A E+ C P TY +LL++ +G + +AE + M + G
Sbjct: 397 LLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKG 456
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-----------------------CQ 221
N IDGL + A++I M + C
Sbjct: 457 YSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCL 516
Query: 222 PSTETYTLMINL-----------------------------------YGKASKSFMALKL 246
P TY+ +++ Y K K+ +A+K+
Sbjct: 517 PDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKV 576
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+M CKP+ TY L+ F + +E ++ +++G GI P+V YN+L++++
Sbjct: 577 LRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSF 634
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 7/184 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C G V ++ + P V Y S + GN A I
Sbjct: 354 PNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRI 413
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + C P++ TY +++ KA + A +L M + + +++ R
Sbjct: 414 LDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCR 473
Query: 272 EGLCEEAEEIFEQLQGAG---IEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAY 328
+ A +I + + G + Y++ +L+ R C PDR +Y+ +V A
Sbjct: 474 NNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKR----CLPDRITYSTLVSAL 529
Query: 329 GRAG 332
+ G
Sbjct: 530 CKEG 533
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ A +SL+ +AE +L++ +P +Y ++ A+ +G L + +FREM G
Sbjct: 251 LLAAAAVRSLNDQAEMLLRAMLEAGVLPDTASYRHIVDAFARAGDLSRVAELFREMADTG 310
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P Y ++ + G +AV + ++M+ D C P+ TY ++++LYG+ +
Sbjct: 311 HTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVR 370
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF EMR+ P+ TY L + F G +E E+F + GIEPD+ ++
Sbjct: 371 ELFREMRT-AVPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVAC 429
Query: 302 ----------EAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
E I++ G P +Y +V+A G A ++E
Sbjct: 430 GQGGLHEDAREVLDYITK--EGMVPTAKAYTGLVEALGHAAMYE 471
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
DSR T +Y L+ AY + L E+A A+ +M+ G+ P+A YN+ + + +P
Sbjct: 164 DSR---TALSYTSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARATDPP 220
Query: 207 KAVE----IFQRMKRD---CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ +F M+ D +P TY ++ S + A L M P+
Sbjct: 221 VPFDMLLGLFAEMRHDVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDT 280
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISR 309
+Y +V+AFAR G E+F ++ G PD AY LMEA+ ++ +
Sbjct: 281 ASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQ 340
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGLHEG 336
M GC P A+Y +++D YGR G +G
Sbjct: 341 MQADGCAPTAATYRVLLDLYGRQGRFDG 368
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL A + L ++AE + R M + G+ P Y +D + G+ + E+
Sbjct: 243 PDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDTASYRHIVDAFARAGDLSRVAEL 302
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P Y ++ + + + A+ + +M++ C P TY L++ + R
Sbjct: 303 FREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGR 362
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRAS 320
+G + E+F +++ A + PD YN L + ++ H G EPD +
Sbjct: 363 QGRFDGVRELFREMRTA-VPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMET 421
Query: 321 YNIMVDAYGRAGLHE 335
++ A G+ GLHE
Sbjct: 422 CEGVLVACGQGGLHE 436
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EA+ + +A ++ C PT TY +LL Y G + +FREMR
Sbjct: 321 LMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRT-A 379
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET------------------ 226
+PP YN GG ++ VE+F M R +P ET
Sbjct: 380 VPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAR 439
Query: 227 -----------------YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
YT ++ G A+ A FN M P I TY +L N F
Sbjct: 440 EVLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVF 499
Query: 270 AREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEAY 304
A+ GL +EAE IF ++ AGI+ + +++AL+EAY
Sbjct: 500 AKGGLFQEAESIFSRMTNSAGIQKNKDSFDALIEAY 535
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 30/283 (10%)
Query: 88 SLPPTHATWDDLINV---------SVQL---RLNKKWDPIVLMSCVSILLIEAYGQKSLH 135
++PP AT++ L +V V+L L +P + +C +L+ A GQ LH
Sbjct: 379 AVPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPD-METCEGVLV--ACGQGGLH 435
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ A + +PT Y L++A + + E+A F M + G P+ YNS
Sbjct: 436 EDAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSL 495
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+ KGG Q+A IF RM Q + +++ +I Y + ++ A+K + EMR +
Sbjct: 496 ANVFAKGGLFQEAESIFSRMTNSAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSR 555
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
P+ + ++NA+ G+ +E++E FE++Q P + AY ++ +AY
Sbjct: 556 FNPDERSLEGVLNAYCIAGVIDESKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRWADAY 615
Query: 305 RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSV 347
L+ M + +RAS V A G ++ ++ +VE ++
Sbjct: 616 DLLEEM----KTNRASSTHQVIASMIQGEYDDSSNWQMVEYAL 654
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIEAY Q + A Y+E+ SR P E + +L AYC++G++++++ F E++
Sbjct: 531 LIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIQSNM 590
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN-LYGKASKSFMA 243
PS + Y + + A ++ + MK + + + MI Y +S M
Sbjct: 591 AVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTNRASSTHQVIASMIQGEYDDSSNWQMV 650
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+ C ++ + AL++ G A + + +G+ P++
Sbjct: 651 EYALDSSNLEGCDYSLRFFNALLDVLWWFGQKARAARVLDHAVNSGLFPEL 701
>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
Length = 382
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +LL L++A A+ EMR +G P+ V YNS IDGL K P +A E+F+ MK
Sbjct: 51 YTVLLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK 110
Query: 217 RDCCQPSTETYTLMINLYGKAS-KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C P TL+ L+ +S MA++L M++ C P++ T T LV+ +E
Sbjct: 111 SVECSPLVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKV 170
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
A E+ ++ AG P++ +L+ +A L+ M GC P+ +Y +
Sbjct: 171 AAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 230
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 231 IDGLCKVG 238
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 50/250 (20%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
++LL + +K L + + E+ D C P TY L+ C + ++A+ +F M+
Sbjct: 52 TVLLSGLWKEKRLDQALAILH-EMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK 110
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKA--VEIFQRMKRDCCQPSTETYTLMINLYGK--- 236
P V YN+ +DGL G + A VE+ + MK C P T T++++ K
Sbjct: 111 SVECSP-LVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESK 169
Query: 237 ---------------------ASKSFM-----------ALKLFNEMRSHKCKPNICTYTA 264
SKS + AL L +M C PN+ TY
Sbjct: 170 VAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 229
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ + G ++A ++E + G G + DV Y+ L+ EA+ L++RM MG
Sbjct: 230 LIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMG 289
Query: 314 CEPDRASYNI 323
+YN+
Sbjct: 290 TPSSTLTYNL 299
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
F EMR + P+ + + IDGL K + F+ M+ T YT++++ K
Sbjct: 1 FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+ AL + +EMR H C+PN+ TY +L++ + + A+E+FE ++ P +
Sbjct: 61 EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVT 119
Query: 297 YNALME------------AYRLISRMHM-GCEPDRASYNIMVDA 327
YN L++ A L+ M GC PD + I+VD
Sbjct: 120 YNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDG 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ + +P ++L+ C + FR M+ G+ V+Y + GL K
Sbjct: 3 EMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKEK 62
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A+ I M+ C+P+ TY +I+ K ++ A +LF M+S +C P + TY
Sbjct: 63 RLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVTYN 121
Query: 264 ALVNAFAREGLCEEAE--EIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
L++ G E A E+ E ++ G PDV L++ A+ ++ M
Sbjct: 122 TLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEML 181
Query: 311 HMGCEPDRASYNIMVDAYGRA 331
GC P+ + ++ RA
Sbjct: 182 DAGCVPNLVTSKSLLHGLCRA 202
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 2/185 (1%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
S +L++ ++S A E+LD+ C+P T LL C + + A A+ R+M
Sbjct: 157 STILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMT 216
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G P+ V Y + IDGL K G + A +++ M D C TY+ +I+ K +
Sbjct: 217 CRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVD 276
Query: 242 MALKLFNEMRSHKCKPNICTYTA--LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A L M + TY + E+ I Q G + D + N
Sbjct: 277 EAHLLLARMVRMGTPSSTLTYNLQHFEGKMVKVDSLEKGMAIHIQAAEKGYKRDDFLSNT 336
Query: 300 LMEAY 304
L++ Y
Sbjct: 337 LVDMY 341
>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 22/257 (8%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
T W+ + V LR + P M I LI G+ +KA + E+++ C
Sbjct: 131 TTLRWESALKVFELLREQLWYRPYAGMY---IKLIVMLGKCKQQEKAYELFQEMIEEGCE 187
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-GLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+ ++Y LL AY SGLL++A ++ EM+ P Y+ I L+ KA
Sbjct: 188 VSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQT 247
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK--LFNEMRSHKCKPNICTYTALVNA 268
+ M +P+T TY I+ YGKA K F ++ L + + CKP++ T + + A
Sbjct: 248 LLSDMVTRGIKPNTITYNTFIDAYGKA-KMFAEMESILVDMLNDDGCKPDVWTMNSTLRA 306
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-------------RLISRMHMGCE 315
F R G E E+ +E+ Q AGI+P + +N L+++Y + + H
Sbjct: 307 FGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWT 366
Query: 316 PDRASYNIMVDAYGRAG 332
+YNI++DA+GRAG
Sbjct: 367 I--VTYNIVIDAFGRAG 381
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 12/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELL-DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
I+AYG+ + + E +++L D C P T L+A+ SG LE E + + ++
Sbjct: 267 FIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEA 326
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS +N +D K + +K + + M++ + TY ++I+ +G+A
Sbjct: 327 GIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQM 386
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LF MRS + KP+ T +LV A+ + G E+ + + ++ + I D YN L++A
Sbjct: 387 EHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDA 446
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
Y +++ M GC+PD+ +Y M AY G+
Sbjct: 447 YGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGM 487
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 16/194 (8%)
Query: 171 EKAEAVFREMR-KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A VF +R + P A +Y I L K +KA E+FQ M + C+ S E+YT
Sbjct: 136 ESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTA 195
Query: 230 MINLYGKASKSFMALKLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+++ Y ++ A + NEM+ S C+P++ TY+ L+ + + +A+ + +
Sbjct: 196 LLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTR 255
Query: 289 GIEPDVYAYNALMEAY---RLISRMHM---------GCEPDRASYNIMVDAYGRAGLHEG 336
GI+P+ YN ++AY ++ + M GC+PD + N + A+GR+G E
Sbjct: 256 GIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLET 315
Query: 337 --KCSYSLVELSVK 348
KC E ++
Sbjct: 316 MEKCYEKFQEAGIQ 329
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
+ A+G+ + E Y + ++ P+ T+ +LL +Y + EK AV M+KY
Sbjct: 304 LRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHY 363
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK------ 239
+ V YN ID + GN ++ +F+ M+ + +PS T ++ YG+A K
Sbjct: 364 SWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDS 423
Query: 240 ----------------------SFMALKLFNEMR-------SHKCKPNICTYTALVNAFA 270
++ L+ F EM+ CKP+ TY + A++
Sbjct: 424 VLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYS 483
Query: 271 REGLCEEAEEIFEQLQGA 288
G+ A+EI E + A
Sbjct: 484 DGGMANHAKEIQELITTA 501
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ YC +G +E A + M PP +N I L G A+ +F M
Sbjct: 132 TYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDM 188
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C PS TY+++++ KAS A+ L +EMR+ C+P+I TY L+NA EG
Sbjct: 189 LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDV 248
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG-CEPDRASYNIM 324
+EA I L G +PD Y ++ E L + M C PD ++N +
Sbjct: 249 DEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTI 308
Query: 325 VDAYGRAGL 333
V + + GL
Sbjct: 309 VTSLCQQGL 317
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A + A + ++L C P+ TY++LL A C + +A + EMR G
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG 227
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V YN I+ + G+ +A+ I + C+P TYT ++ + +
Sbjct: 228 CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 287
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF EM S+KC P+ T+ +V + ++GL + A ++ + + G PD+ Y++++
Sbjct: 288 ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMV 325
+A L+SR+ GC+PD +Y ++
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL 379
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L++A C+ G + A AVF +M G PS V Y+ +D K ++A+ +
Sbjct: 160 PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVL 219
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M+ C+P TY ++IN AL + +++ SH CKP+ TYT ++ +
Sbjct: 220 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCG 279
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
+E EE+F ++ PD +N ++ A +++ M GC PD +
Sbjct: 280 SERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVT 339
Query: 321 YNIMVDAYGRAG 332
Y+ ++D G
Sbjct: 340 YSSILDGLCDVG 351
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 22/256 (8%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS 148
+P A +DD+ L++ P V+ + L++A + S +++A E+
Sbjct: 178 VPDALAVFDDM--------LHRGCSPSVVTYSI---LLDATCKASGYRQAMVLLDEMRAK 226
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
C P TY +L+ A C G +++A + ++ +G P AV Y + L ++
Sbjct: 227 GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEV 286
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+F M + C P T+ ++ + A+K+ + M H C P+I TY+++++
Sbjct: 287 EELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDG 346
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPD 317
G ++A E+ +L+ G +PD AY +++ A L++ M C PD
Sbjct: 347 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPD 406
Query: 318 RASYNIMVDAYGRAGL 333
++N ++ + + GL
Sbjct: 407 EVTFNTVIASLCQKGL 422
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y +LK C E AE + EM PP V +N+ I L + G +A+
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ ++M + C P TY +I+ A++L + ++S+ CKP+I T+ L+
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPDR 318
E+AE++ + + PD +N L++A + M GC P++
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQ 547
Query: 319 ASYNIMVDAYGRAG 332
++YNI+VDA +AG
Sbjct: 548 STYNIVVDALLKAG 561
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE + ++ S C P T+ ++ + C GLL +A + M + G P+ YN
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D LLK G Q+A+++ M P TY +I+ KA K AL L M S+
Sbjct: 554 VDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLI 307
P+ TY +L RE + A + +LQ G+ PD YN ++ + +
Sbjct: 612 SPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAID 671
Query: 308 SRMHM---GCEPDRASYNIMVDAYG 329
HM GC PD ++Y I+++A
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALA 696
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE E++ S C P E T+ ++ + C GL+++A V +M + G P V YNS
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI 448
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
IDGL A+E+ ++ C+P T+ ++ + A +L M C
Sbjct: 449 IDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDC 508
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+ T+ ++ + ++GL +A E + + G P+ YN ++ EA +
Sbjct: 509 PPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALK 568
Query: 306 LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
L+S M G PD +YN ++ +AG E
Sbjct: 569 LLSGMTNG-TPDLITYNTVISNITKAGKME 597
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 48/244 (19%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + QK L +A ++ ++ C P TY ++ C ++ A + ++ YG
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 185 LPPSAVVYNSYIDG-----------------------------------LLKGGNPQKAV 209
P V +N+ + G L + G +A+
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E + M + C P+ TY ++++ KA K+ ALKL + M + P++ TY +++
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNI 590
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
+ G EEA ++ + G+ PD Y +L A R++ R+ MG PD
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDA 650
Query: 319 ASYN 322
YN
Sbjct: 651 TFYN 654
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ +G +E+A + R M GL P + Y S G+ + +A+ +
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
R++ P Y ++ + + ++ +A+ F M S C P+ TY L+ A A
Sbjct: 638 LCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAY 697
Query: 272 EGLCEEAEEIFEQLQGAGI 290
E L +EA+++ L G+
Sbjct: 698 ECLLDEAKQLLVNLCSLGV 716
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-------- 309
+ TY +VN + R G E+A + + G PD + +N L+ A + R
Sbjct: 129 TVVTYNTMVNGYCRAGRIEDARRL---ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVF 185
Query: 310 ---MHMGCEPDRASYNIMVDAYGRA 331
+H GC P +Y+I++DA +A
Sbjct: 186 DDMLHRGCSPSVVTYSILLDATCKA 210
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++A ++ + A ++E DS + + ++ +LL YC + L+ A + EM K
Sbjct: 240 VLMDALVKEGSVEHAYSAFMEFKDSIHVDFQ-SFNILLHGYCKARKLDDARKIMDEMDKQ 298
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V Y +I+ K + + IF M+ C+P+ TYT+ ++ GKA + A
Sbjct: 299 GFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKA 358
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+++ M+S+ C P+ Y++L+ + G ++A ++FE ++ G+ PD+ YN ++
Sbjct: 359 LEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITS 418
Query: 302 --------EAYRLISRMHM-GCEPDRASY 321
A +L+ RM C+PD +Y
Sbjct: 419 ACTHLEEENALKLLRRMEEDSCKPDIQTY 447
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ + A G+ KA Y + + C+P Y+ L+ SG L+ A VF +M+K
Sbjct: 344 IFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQ 403
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN+ I + A+++ +RM+ D C+P +TY ++ + + + +
Sbjct: 404 GVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVL 463
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L N M + ++ TY LV + G E A FE++ G+ P Y L+E
Sbjct: 464 KFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVE 522
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y ++ YC EA+F EM++ P+ + Y ++ L K KA+E+
Sbjct: 302 PNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEV 361
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ MK +CC P Y+ +I + ++ + A +F +M+ P++ TY ++ +
Sbjct: 362 YEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACT 421
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HM---GCEPDRAS 320
E A ++ +++ +PD+ Y L++ R+ HM D +
Sbjct: 422 HLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGT 481
Query: 321 YNIMVDAYGRAGLHEGKCSY 340
Y ++V ++G E CS+
Sbjct: 482 YVLLVGGLCKSGKLELACSF 501
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
S V + L + GN Q AVE F+ +++ + E ++++ K A F
Sbjct: 199 SLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAF 258
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--- 304
E + + ++ L++ + + ++A +I +++ G +P+V +Y +E Y
Sbjct: 259 MEFKD-SIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKL 317
Query: 305 -------RLISRMH-MGCEPDRASYNIMVDAYGRA 331
+ S M C+P+ +Y I + A G+A
Sbjct: 318 KDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKA 352
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A V +EM
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ V++ + G G QK ++ + MK +P + Y ++I+ +GK + A+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+ M S +P+ T+ L++ + G AEE+FE ++ G P YN ++ +Y
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
RL+ +M G P+ ++ +VD YG++G
Sbjct: 525 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 563
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +++ + L+ A F M G+ P V +N+ ID K G A E+
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R C P TY +MIN YG + +L +M+S PN+ T+T LV+ + +
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM---------GCEPDRAS 320
G +A E E+++ G++P YNAL+ AY R +S + G +P +
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 321 YNIMVDAYG 329
N +++A+G
Sbjct: 622 LNSLINAFG 630
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 19/225 (8%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ VSI+ A ++L +A F EL S P Y LLK Y +G L+ AE++
Sbjct: 306 TLVSIISALADSGRTLEAEALFE--ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---G 235
EM K G+ P Y+ ID + G + A + + M+ QP++ ++ ++ + G
Sbjct: 364 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+ K+F LK EM+S KP+ Y +++ F + + A F+++ GIEPD
Sbjct: 424 EWQKTFQVLK---EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 296 AYNALMEAY----RLISRMHM-------GCEPDRASYNIMVDAYG 329
+N L++ + R I M GC P +YNIM+++YG
Sbjct: 481 TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 525
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 17/193 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++ A SG +AEA+F E+R+ G+ P YN+ + G +K G + A + M
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ P TY+L+I+ Y A + A + EM + +PN ++ L+ F G
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
++ ++ ++++ G++PD YN +++ + R++S G EPDR ++
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE---GIEPDRVTW 482
Query: 322 NIMVDAYGRAGLH 334
N ++D + + G H
Sbjct: 483 NTLIDCHCKHGRH 495
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + H AE + + C+P TY +++ +Y + + + +M+ G
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V + + +D K G A+E + MK +PS+ Y +IN Y + S A+
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 604
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F M S KP++ +L+NAF + EA + + ++ G++PDV Y LM+A
Sbjct: 605 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
+ + GC+PDR + +++ A
Sbjct: 665 IRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 9/228 (3%)
Query: 87 DSLPPTHATWDDLINVSVQ----LRLNKKWDPIVLMSCVSI-----LLIEAYGQKSLHKK 137
+ + P TW+ LI+ + + + ++ + C+ ++I +YG +
Sbjct: 473 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+ ++ +P T+ L+ Y SG A EM+ GL PS+ +YN+ I+
Sbjct: 533 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G ++AV F+ M D +PS +IN +G+ + A + M+ + KP
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
++ TYT L+ A R ++ ++E++ +G +PD A + L A R
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL + T TY L+ A + +EKA + +MR+ G V Y+ I L +
Sbjct: 188 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 247
Query: 205 PQKA--VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+ +++ ++RD + + +I + K+ AL+L ++ T
Sbjct: 248 IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATL 307
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH- 311
++++A A G EAE +FE+L+ +GI+P AYNAL++ Y ++S M
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 312 MGCEPDRASYNIMVDAYGRAGLHE 335
G PD +Y++++DAY AG E
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWE 391
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ + SG KA + + GL S I L G +A +F+ +++
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P T Y ++ Y K A + +EM P+ TY+ L++A+ G E A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAY 328
+ ++++ ++P+ + ++ L+ +R L +G +PDR YN+++D +
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 329 GR 330
G+
Sbjct: 455 GK 456
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y + +AE + + P +TY L+ +C +G E+A + M + G
Sbjct: 349 MISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEG 408
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ +DGL K G Q+A ++ + R+ TYT++I+ + K ++ AL
Sbjct: 409 FSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQAL 468
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LFN+M +P+I +YT L+ F RE +E+E FE+ G+ P Y +++ Y
Sbjct: 469 VLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGY 528
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGR-AGLHEGKCSY 340
+ RM GC D +Y ++ + + L E +C Y
Sbjct: 529 CREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLY 576
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +L+++ +C G + +A FR + GL P+ + + I+GL K G+ ++A E+ + M
Sbjct: 239 TLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEM 298
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGL 274
+P+ T+T +I+ K + A +LF ++ RS KPN+ TYTA+++ + R+
Sbjct: 299 VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEK 358
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNI 323
AE + +++ G+ P+ Y L++ AY L++ M+ G P+ +YN
Sbjct: 359 MNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNA 418
Query: 324 MVDAYGRAG 332
+VD + G
Sbjct: 419 IVDGLCKKG 427
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ + +K +A + + + P + +++ C G +++A + EM
Sbjct: 242 LIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR 301
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFM 242
G P+ + + IDGL K G +KA +F ++ R + +P+ TYT MI+ Y + K
Sbjct: 302 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNR 361
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
A L + M+ PN TYT L++ + G E A E+ + G P+V YNA++
Sbjct: 362 AEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVD 421
Query: 302 ---------EAYRLI-SRMHMGCEPDRASYNIMVDAY 328
EAY+++ S G + D+ +Y I++ +
Sbjct: 422 GLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEH 458
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRC-IPTEDTYALLLKAYCM 166
+ + W P V LI+ +K +KA +L+L+ S P TY ++ YC
Sbjct: 299 VGRGWKPNVY---THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCR 355
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+ +AE + M++ GL P+ Y + IDG K GN ++A E+ M + P+ T
Sbjct: 356 DEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCT 415
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y +++ K + A K+ + + TYT L++ ++ ++A +F ++
Sbjct: 416 YNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMV 475
Query: 287 GAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+GI+PD+++Y L+ + RM G P +Y M+ Y R G
Sbjct: 476 KSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREG 532
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 47/258 (18%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++++ + K+A +E+ + P+ T ++K GL+E AE +F EM G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 185 LPPSAVVYNSYIDGLLKGGNP-----------------------------------QKAV 209
+ P+ V Y + G K GN +A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F+R +P+ +T MI K A ++ EM KPN+ T+TAL++
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317
Query: 270 AREGLCEEAEEIFEQL-QGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPD 317
++G E+A +F +L + +P+V Y A++ Y L+SRM G P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377
Query: 318 RASYNIMVDAYGRAGLHE 335
+Y ++D + +AG E
Sbjct: 378 TNTYTTLIDGHCKAGNFE 395
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C +++A +F +M K G+ P Y + I + +++ F+
Sbjct: 450 TYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEA 509
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R P+ +TYT MI Y + +ALK F+ M H C + TY AL++ ++
Sbjct: 510 VRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKL 569
Query: 276 EEAEEIFEQLQGAGIEP 292
+EA +++ + G+ P
Sbjct: 570 DEARCLYDAMIEKGLTP 586
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +++ K+A + +++ S P +Y L+ +C ++++E F E ++
Sbjct: 453 ILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRF 512
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ Y S I G + GN + A++ F RM C + TY +I+ K SK A
Sbjct: 513 GLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEA 572
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAF 269
L++ M P C T + A+
Sbjct: 573 RCLYDAMIEKGLTP--CEVTRVTLAY 596
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ K++E + E + +PT TY ++ YC G L A F M +G
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
++ Y + I GL K +A ++ M P T + Y K A+
Sbjct: 549 CASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAM 608
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ + + VN R+ LC E
Sbjct: 609 VVLERLEKK-------LWVRTVNTLVRK-LCSE 633
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I Y ++ +AE +++ P +TY L+ +C G A + +MR+
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ YN+ IDGL K G Q+A ++ + Q TYT+MI + K A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L LFN M + C P+I TYT L+ + ++ EE++++F++ + P Y +++
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510
Query: 304 Y----------RLISRM-HMGCEPDRASYNIMV 325
Y R+ RM GC+ D +Y ++
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALI 543
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++++ +C G +FR M + G PP+ V Y ++IDGL K ++A + + M
Sbjct: 222 TCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEM 281
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGL 274
+P+ T+T +IN K + A +LF ++ +S KPN+ TYT ++ + +EG
Sbjct: 282 VAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGK 341
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNI 323
AE + ++ G+ P+ Y L+ A+ L+++M G +P+ +YN
Sbjct: 342 LARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNA 401
Query: 324 MVDAYGRAG 332
++D + G
Sbjct: 402 LIDGLCKKG 410
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 136 KKAEFTY-LELL----DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K+ TY L+L ++ C P TY L+ YC +E+++ +F + L P+
Sbjct: 443 KQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQ 502
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y S I G K G A+ +F+RM ++ CQ + TY +I+ K S+ A L+ M
Sbjct: 503 TYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGM 562
Query: 251 RSHKCKPNICTYTALVNAF 269
+ P C T + AF
Sbjct: 563 LDKRLVP--CEVTPVTLAF 579
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
+T +L+A +G A VF M + GL P A + + I G + G ++ +
Sbjct: 150 ETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLT 209
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M+ T T+++ ++ + + +LF M PN+ YTA ++ +
Sbjct: 210 VMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRA 269
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM--HMGCEPDRASY 321
++A + E++ G++P+VY + +L+ A+RL ++ +P+ +Y
Sbjct: 270 YVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTY 329
Query: 322 NIMVDAYGRAG 332
+M+ Y + G
Sbjct: 330 TVMIGGYCKEG 340
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 3/179 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y Q+ ++++ + + L +PT+ TY ++ YC G A VF M + G
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
++ Y + I GL K ++A +++ M P T + Y + K+ +A+
Sbjct: 532 CQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAV 591
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + R K + N T LV + G E+A ++ + D AY + + +
Sbjct: 592 SILD--RLDKRRKNH-TVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINS 647
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ D P TY L+K +C +G +E A +F EMR G+ P+AVV+ + ID K
Sbjct: 243 YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN ++++Q M+ P Y ++N +A A + EM++ KP+ T
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVT 362
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-M 310
YT L++ ++G + A +I +++ + D Y AL+ +A R++ M
Sbjct: 363 YTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMM 422
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
EPD +Y +++DA+ R G
Sbjct: 423 EAALEPDNTTYTMVIDAFCRKG 444
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
YL+LLD+ P + +L++ + G L A VF EMR+ + P+ V +N+ I G+ +
Sbjct: 174 YLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCR 232
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+ +++ M +P TY +I + + + A+K+FNEMR PN
Sbjct: 233 ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVV 292
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM- 310
+T L++A +EG ++++ ++ G+ PD+ AYNAL+ A ++ M
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
+ G +PD+ +Y ++D + G
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDG 374
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 11/225 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ V LI+A+ ++ Y ++ +P Y L+ C + L+ AE++
Sbjct: 290 AVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVE 349
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM+ GL P V Y + IDG K G A++I Q+M TYT +I+ KA
Sbjct: 350 EMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAG 409
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ A ++ EM +P+ TYT +++AF R+G + ++ +++Q G +P V YN
Sbjct: 410 RPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYN 469
Query: 299 ALMEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+M + +M ++G PD +YNI++D + G
Sbjct: 470 VIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + + A + E+ D+ P + L+ A+C G + ++++MR G
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ ++GL + N + A I + MK +P TYT +I+ K K MA+
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAM 380
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
+ +M + + TYTAL++ ++ G +AE + ++ A +EPD Y +++A
Sbjct: 381 DIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF 440
Query: 304 ---------YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
++L+ M + G +P +YN++++ + G
Sbjct: 441 CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY L+ +G AE V REM + L P Y ID + G+ + ++ +
Sbjct: 395 EVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK 454
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
M+ +P TY +++N K + A L + M + P+ TY L++ + G
Sbjct: 455 EMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+EE+ G+ PD Y +L+
Sbjct: 515 KVANSEELESS---KGMVPDFAVYTSLI 539
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + AE E++++ P TY +++ A+C G ++ + +EM+ G
Sbjct: 401 LISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKG 460
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN---LYGKASKSF 241
P V YN ++GL K G + A + M P TY ++++ +GK + S
Sbjct: 461 KKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS- 519
Query: 242 MALKLFNEMRSHK-CKPNICTYTALVNAFARE 272
E+ S K P+ YT+L++ A++
Sbjct: 520 ------EELESSKGMVPDFAVYTSLISELAKK 545
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ YC SG L +A +F EM+ GL P + VY + +DG + + ++A+ I
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 757
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC----KPNICTYTALVN 267
F+ ++ C S+ + +IN K K+ + + N + KPN TY +++
Sbjct: 758 FETNEKGCAS-SSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMID 816
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEP 316
+EG E A+E+F +Q A + P V Y +L+ Y + R + G EP
Sbjct: 817 YLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEP 876
Query: 317 DRASYNIMVDAYGRAGLHEGKCSYSLVEL 345
D Y+++++A+ L EG + +LV L
Sbjct: 877 DNIMYSVIINAF----LKEGMTTKALVLL 901
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y +K +A + +++ + TY +L+ +G + AE +F EMR G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y + IDG K GN QKA IF M + + Y +++ + ++ + A
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
+L +EM PN TY +++ + + G EA ++F++++ G+ PD + Y L++
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745
Query: 303 --------AYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
A + GC A +N +++ + G E
Sbjct: 746 CRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTE 786
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
I Y + A+ E+L+ IP + L+ YC G + +A + FR M + G
Sbjct: 531 FISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQG 590
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ A Y ++GL+K G A EIF M+ P +Y +I+ + K A
Sbjct: 591 ILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKAS 650
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY------- 297
+F+EM N+ Y L+ F R G E+A+E+ +++ G G P+ Y
Sbjct: 651 SIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGY 710
Query: 298 ---NALMEAYRLISRMHM-GCEPDRASYNIMVDA 327
L EA++L M + G PD Y +VD
Sbjct: 711 CKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDG 744
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 12/238 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + QKS A E+ + P Y L+ + +++A + EM + G
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENG 520
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P A Y ++I G ++ G A + + M P+ T +IN Y K K A
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEAC 580
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F M + TYT L+N + G +AEEIF +++G GI PDV++Y L++ +
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
+ M G + YN+++ + R+G E K L E+S K +P
Sbjct: 641 SKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIE-KAKELLDEMSGKGFP 697
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + TY +++ C G LE A+ +F M+K L P+ + Y S ++G K G + +
Sbjct: 806 PNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSV 865
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK-----CKPNICTYTALV 266
F + +P Y+++IN + K + AL L ++M + CK +I T AL+
Sbjct: 866 FDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALL 925
Query: 267 NAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ FA+ G E AE++ E + PD
Sbjct: 926 SGFAKVGEMEVAEKVVENMVRLKYIPD 952
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
K+G P+ V YN ID L K GN + A E+F M++ P+ TYT ++N Y K +
Sbjct: 802 KFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRS 860
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
+F+E+ + +P+ Y+ ++NAF +EG+ +A + +Q+
Sbjct: 861 EMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+KA+ + ++ P YA L++ + + K + E++K + S Y +
Sbjct: 367 EKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTA 426
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ G+ G+ A I + M C+P+ YT +I + + S+ A+++ EMR
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
P+ Y +L+ ++ +EA ++ G +PD + Y A + Y
Sbjct: 487 APDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGY 535
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LIE + ++ +K +E+ + + TY +K C SG L+ A + +EM G
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V+Y + I L+ AV + + M+ P T Y +I KA K A
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEAR 510
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
EM + KP+ TY A ++ + G A++ +++ G+ P+ L+ Y
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570
Query: 305 ----RLI-------SRMHMGCEPDRASYNIMVDAYGRAG 332
++I S + G D +Y ++++ + G
Sbjct: 571 CKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNG 609
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 23/222 (10%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF---------------------RE 179
Y +++ + +Y +L+ A+C G ++ A+ V +
Sbjct: 211 VYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKS 270
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M GL PS YN IDGL K + A + M Y+++I+ K
Sbjct: 271 MSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRN 330
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ A L +EM SH + Y + ++EG E+A+ +F+ + G+ P AY +
Sbjct: 331 ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYAS 390
Query: 300 LMEAYRLISRMHMGCE--PDRASYNIMVDAYGRAGLHEGKCS 339
L+E + + G E + NI++ Y +G CS
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCS 432
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PT TY LL Y G + +VF E+ G+ P ++Y+ I+ LK G KA+
Sbjct: 840 MPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALV 899
Query: 211 IFQRM-----KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ +M D C+ S T +++ + K + +A K+ M K P+ T L
Sbjct: 900 LLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIEL 959
Query: 266 VN 267
+N
Sbjct: 960 IN 961
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 50/257 (19%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ + ++ L ++ Y + S +P Y L+ YC G+++KA VF EMR+
Sbjct: 233 VLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK 292
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + YN I GL +G +AV++ ++ + P+ TY ++IN + K A
Sbjct: 293 GIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTA 352
Query: 244 LKLFNEMRSHKCKPNICTY-----------------------------------TALVNA 268
++LFN+++S P + TY T L++A
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDA 412
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-------------YRLISRMHMGCE 315
FAR ++A E+ ++ +G+ PDVY Y+ L+ ++ + MH+ +
Sbjct: 413 FARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHL--Q 470
Query: 316 PDRASYNIMVDAYGRAG 332
P+ YN M+ Y + G
Sbjct: 471 PNSVIYNTMIHGYCKEG 487
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P + TY++L+ + GL + ++ M + G+ P+A YN I G KA +
Sbjct: 225 VPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFK 284
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M+ TY ++I + K A+KL +++ PNI TY L+N F
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRMHMGC-EPDRA 319
G + A +F QL+ +G+ P + YN L+ Y L+ M C +
Sbjct: 345 DVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKV 404
Query: 320 SYNIMVDAYGRAGLHEGKCS-YSLVELS 346
+Y I++DA+ R + C +SL+E S
Sbjct: 405 TYTILIDAFARLNYTDKACEMHSLMEKS 432
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
+L S+ + ++ +++ C +G + + + ++GL P+ V+Y + IDG K
Sbjct: 147 FNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKN 206
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
G+ A +F +M R P+ TY++++N + K +++ M PN Y
Sbjct: 207 GDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAY 266
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH- 311
L++ + +G+ ++A ++F +++ GI V YN L+ EA +L+ +++
Sbjct: 267 NCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G P+ +YNI+++ + G
Sbjct: 327 VGLSPNIVTYNILINGFCDVG 347
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 146 LDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
++ RCI ++ TY +L+ A+ +KA + M K GL P Y+ I G GN
Sbjct: 394 MEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGN 453
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
++A + F+ + QP++ Y MI+ Y K S+ AL+L NEM PN+ ++ +
Sbjct: 454 MKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ R+ +EAE + Q+ +G++P V Y
Sbjct: 514 TMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ C +G + A+ +F +M + GL P+ Y+ ++G K G ++ ++
Sbjct: 191 PNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQM 250
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M R P+ Y +I+ Y A K+F EMR + TY L+ R
Sbjct: 251 YENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
EA ++ ++ G+ P++ YN L+ + + +M G P +
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 321 YNIMVDAYGRA 331
YN ++ Y +
Sbjct: 371 YNTLIAGYSKV 381
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 94/224 (41%), Gaps = 46/224 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ +C G ++ A +F +++ GL P+ V YN+ I G K N A+++
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKAS--------KSFM--------------------- 242
+ M+ C S TYT++I+ + + + S M
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450
Query: 243 ------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
A K F + +PN Y +++ + +EG A + ++ +G+ P+V +
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510
Query: 297 YNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYG 329
+ + M EA L+ +M + G +P + Y ++ G
Sbjct: 511 FCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 37/282 (13%)
Query: 83 WDAFDSLP-----PTHATWDDLINVSVQ------------LRLNKK---WDPIVLMSCVS 122
W +D + P H T +I V + R+N+K W VL +
Sbjct: 262 WKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGA--- 318
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI+++ + L +A E+ Y L+ AY S +E+AE +F EM+
Sbjct: 319 --LIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKA 376
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK-SF 241
G+ P++ YN +D + P+ + M+ +P+ ++YT +I+ YG+ K S
Sbjct: 377 KGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSD 436
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
MA F M+ KP +YTAL++A++ G E+A FE ++ GI+P + Y AL+
Sbjct: 437 MAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALL 496
Query: 302 EAYRL---------ISRMHMG--CEPDRASYNIMVDAYGRAG 332
+A+R I ++ + E R ++NI++D + + G
Sbjct: 497 DAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQG 538
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AYG QK + A +L + PT +Y L+ AY + G EKA F M++
Sbjct: 424 LISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKRE 483
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ PS Y + +D + G+ Q ++I++ M D + + T+ ++++ + K A
Sbjct: 484 GIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEA 543
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ E +P + TY L+NA+AR G ++ +++ ++PD Y+ ++ A
Sbjct: 544 RDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYA 603
Query: 304 Y 304
Y
Sbjct: 604 Y 604
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 47/188 (25%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
L+K++C GL +A + EM K G+ +A+VYN+ +D
Sbjct: 319 LIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDA--------------------- 357
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
Y K+++ A LF EM++ P TY L++A++R E E
Sbjct: 358 --------------YSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIE 403
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYRLISRM------------HMGCEPDRASYNIMVDA 327
+ ++Q G+EP+V +Y L+ AY +M +G +P SY ++ A
Sbjct: 404 NLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHA 463
Query: 328 YGRAGLHE 335
Y G HE
Sbjct: 464 YSVGGWHE 471
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+LL +G+ + + R + K +YNS I GL G A +++ M+
Sbjct: 211 SLLFPMLGRAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMET 270
Query: 218 DCCQPSTETYTLMINLYGKASKSFM-ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ +P T ++MI + K S A + F M K ++ AL+ +F EGL
Sbjct: 271 NNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKN 330
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMV 325
EA I +++ GI + YN LM+AY +R+ G P A+YNI++
Sbjct: 331 EALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILM 390
Query: 326 DAYGR 330
DAY R
Sbjct: 391 DAYSR 395
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 12/229 (5%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
SC +I Y + +A+ E+++ + T L++ A+C L+ +A F
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
++ K GL P+ + Y+S I GL K G+ ++A E+ + M ++ +P+ T+T +I+ K
Sbjct: 891 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950
Query: 239 KSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A +LF ++ RS KPN+ TYTA+++ + +E AE +FE+++ G+ P+ Y
Sbjct: 951 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 1010
Query: 298 NALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L++ AY L+ M + G P+ +YN +VD + G E
Sbjct: 1011 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAE 1059
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y ++ +AE + + + +P +TY L+ +C +G KA + M G
Sbjct: 978 MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 1037
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS +DGL K G ++A ++ ++ + TYT++I+ K + AL
Sbjct: 1038 FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQAL 1097
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
N+M +P+I YT L+ AF R+ + +++E++F+++ G+ P Y +++ Y
Sbjct: 1098 VFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 1157
Query: 305 ----------RLISRM-HMGCEPDRASYNIMV 325
+ +M GC PD SY ++
Sbjct: 1158 CREKKVSLAVKFFQKMSDHGCAPDSISYGALI 1189
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 112 WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLL 170
W P V LI +K ++A +L+L+ S P TY ++ YC L
Sbjct: 932 WKPNVY---THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKL 988
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+AE +F M++ GL P+ Y + IDG K GN KA E+ + M + P+T TY +
Sbjct: 989 SRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSI 1048
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
++ K ++ A KL N ++ + + TYT L++ + +A ++ G
Sbjct: 1049 VDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGF 1108
Query: 291 EPDVYAYNALMEAY----------RLISR-MHMGCEPDRASYNIMVDAYGR 330
+PD++ Y L+ A+ +L + +G P + +Y M+ Y R
Sbjct: 1109 QPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 1159
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C + +A +M K G P +Y + I + + + ++F +
Sbjct: 1079 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 1138
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ ETYT MI Y + K +A+K F +M H C P+ +Y AL++ +E
Sbjct: 1139 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 1198
Query: 276 EEAEEIFEQLQGAGIEP 292
+EA ++++ + G+ P
Sbjct: 1199 DEARQLYDTMIDKGLSP 1215
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 14/255 (5%)
Query: 103 SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
+V + L+ + +VL + V +I + L + A + E+ P TY ++
Sbjct: 780 AVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIV 839
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
YC +G + +A+ EM + G I + +AV F ++ + P
Sbjct: 840 GYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSP 899
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+ Y+ MI+ K A +L EM + KPN+ T+T+L++ ++G E A +F
Sbjct: 900 NLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF 959
Query: 283 EQL-QGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIMVDAYGR 330
+L + +P+V+ Y A++ Y L RM G P+ +Y ++D + +
Sbjct: 960 LKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCK 1019
Query: 331 AGLHEGKCSYSLVEL 345
AG +Y L+EL
Sbjct: 1020 AGNFSK--AYELMEL 1032
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ A+C +++ +E +F E+ K GL P+ Y S I G + AV+
Sbjct: 1110 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 1169
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ+M C P + +Y +I+ K S+ A +L++ M P T L + +
Sbjct: 1170 FQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCK 1229
Query: 272 EGLCEEAEEIFEQLQ 286
A I E+L
Sbjct: 1230 TEDFASAMVILERLN 1244
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++++ K +E + E++ PT++TY ++ YC + A F++M +G
Sbjct: 1118 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHG 1177
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
P ++ Y + I GL K +A +++ M
Sbjct: 1178 CAPDSISYGALISGLCKESRLDEARQLYDTM 1208
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y L+ PT TY LL +G +E AE +F EM +YG + +YN ++G
Sbjct: 848 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 907
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN +K +FQ M P ++YT++I+ KA + L F ++ +P++ T
Sbjct: 908 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 967
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-M 310
Y L++ + EEA +F ++Q GI P++Y YN+L+ EA ++ +
Sbjct: 968 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1027
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G +P+ +YN ++ Y +G
Sbjct: 1028 TKGWKPNVFTYNALIRGYSVSG 1049
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 15/220 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++L AE + E+ + C P E TY LLL A S +E+ V EM + G
Sbjct: 761 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 820
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN+ I GL+K ++A++++ + P+ TY +++ KA + A
Sbjct: 821 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 880
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
LFNEM + CK N Y L+N G E+ +F+ + GI PD+ +Y +++
Sbjct: 881 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 940
Query: 304 ------------YRLISRMHMGCEPDRASYNIMVDAYGRA 331
+R + + MG EPD +YN+++D G++
Sbjct: 941 CKAGQLNDGLTYFRQL--LEMGLEPDLITYNLLIDGLGKS 978
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE + E+L+ C Y +LL + ++G EK +F++M G+ P Y
Sbjct: 877 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 936
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID L K G + F+++ +P TY L+I+ GK+ + A+ LFNEM+
Sbjct: 937 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 996
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
PN+ TY +L+ + G EA +++E+L G +P+V+ YNAL+ AY
Sbjct: 997 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1056
Query: 306 LISRMHM-GCEPDRASY 321
RM + GC P+ ++Y
Sbjct: 1057 AYGRMIVGGCLPNSSTY 1073
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A C G + +A +F EM++ G+ P YNS I G LK A+E+F+ M
Sbjct: 338 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 397
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ T+ L IN YGK+ +S A++ + M+S P++ A++ A+ G
Sbjct: 398 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 457
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A+ +F +L+ G+ PD Y ++ EA ++ M C PD + N ++
Sbjct: 458 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 517
Query: 326 DAYGRAG 332
D +AG
Sbjct: 518 DTLYKAG 524
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L + Y SG KA + M+ G+ P V N+ + GL K G A +
Sbjct: 403 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 462
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K P T TYT+MI KASK A+K+F +M + C P++ +L++ +
Sbjct: 463 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYK 522
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G +EA IF QL+ +EP YN L+ E L+ M H P+ +
Sbjct: 523 AGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLIT 582
Query: 321 YNIMVDAYGRAG 332
YN ++D + G
Sbjct: 583 YNTILDCLCKNG 594
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++D P +Y +++ C +G L FR++ + GL P + YN IDGL K
Sbjct: 918 FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 977
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++AV +F M++ P+ TY +I GKA K+ A K++ E+ + KPN+ T
Sbjct: 978 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1037
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
Y AL+ ++ G + A + ++ G P+ Y L
Sbjct: 1038 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 32/306 (10%)
Query: 54 FVDGIFPVLSPTAQQILRFVQREVDSNTIW-----DAFDSLPPTHA------------TW 96
VDG+ P + + ++ F +R +W +A P ++ +
Sbjct: 187 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 246
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
D+ + ++ N+ P V+ V I ++ G+ S A+ + ++ S P T
Sbjct: 247 DEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGRIS---DAKDVFWKMKKSDQKPDRVT 302
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL + +G + ++ M+ G + V Y + ID L + G +A+E+F MK
Sbjct: 303 YITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMK 362
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P +Y +I+ + KA + AL+LF M H KPN T+ +N + + G
Sbjct: 363 QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESI 422
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMV 325
+A + +E ++ GI PDV A NA++ A R+ + MG PD +Y +M+
Sbjct: 423 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 482
Query: 326 DAYGRA 331
+A
Sbjct: 483 KCCSKA 488
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+A + + G L A M++ G+ +A YN + L+K G ++A+E+++ M
Sbjct: 127 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 186
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D PS TY++++ +GK L L EM +H KPN+ +YT + +
Sbjct: 187 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 246
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
+EA I +++ G +PDV + L++ R+ + PDR +Y +
Sbjct: 247 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 306
Query: 325 VDAYGRAG 332
+D +G G
Sbjct: 307 LDKFGDNG 314
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+G++ + + E+ P +Y + ++ + ++A + +M
Sbjct: 200 VLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE 259
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + + I L G A ++F +MK+ +P TY +++ +G S
Sbjct: 260 GCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSV 319
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++++N M++ N+ YTA+++A + G EA E+F++++ GI P+ Y+YN+L+
Sbjct: 320 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 379
Query: 304 YRLISRM--------HM---GCEPDRASYNIMVDAYGRAG 332
+ R HM G +P+ ++ + ++ YG++G
Sbjct: 380 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 419
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L I YG+ KA Y EL+ S+ I P +L SG L A+ VF E++
Sbjct: 409 VLFINYYGKSGESIKAIQRY-ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 467
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P + Y I K +AV+IF M + C P +I+ KA +
Sbjct: 468 AMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGD 527
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +++ +P TY L+ REG +E + E++ + P++ YN ++
Sbjct: 528 EAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTIL 587
Query: 302 EAY-----------RLISRMHMGCEPDRASYNIMV 325
+ L S GC PD +SYN ++
Sbjct: 588 DCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVI 622
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT 228
L++ AE +F EM++ G P YN +D + K ++ +++ + M R + + TY
Sbjct: 770 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYN 829
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+I+ K+ + A+ L+ + S P CTY L++ + G E+AE +F ++
Sbjct: 830 TIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEY 889
Query: 289 GIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMVDAYGRAG-LHEG 336
G + + YN L+ +R+ + G PD SY I++D +AG L++G
Sbjct: 890 GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 949
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+ ++A Y ++ +P+ TY++L+ A+ +E + REM +G+ P+
Sbjct: 172 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 231
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y I L + +A I +M+ + C+P T+T++I + A + A +F +M
Sbjct: 232 SYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 291
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+ KP+ TY L++ F G + EI+ ++ G +V AY A+++A + R+
Sbjct: 292 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 351
Query: 311 -----------HMGCEPDRASYNIMVDAYGRA 331
G P++ SYN ++ + +A
Sbjct: 352 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 383
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 140 FTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
TY +LL+ P TY LL+ S LE+A ++F EM+K G+ P+ YNS I
Sbjct: 950 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILH 1009
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
L K G +A ++++ + +P+ TY +I Y + + A + M C PN
Sbjct: 1010 LGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1069
Query: 259 ICTYTALVN 267
TY L N
Sbjct: 1070 SSTYMQLPN 1078
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + S +A + +++++ C+P L+ +G ++A +F ++++
Sbjct: 480 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 539
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN+ + GL + G ++ + + + M P+ TY +++ K A
Sbjct: 540 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 599
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA---------GIEPDV 294
L + M + C P++ +Y ++ +E EA IF Q++ I P
Sbjct: 600 LDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSF 659
Query: 295 YAYNALMEAYRLISR--MHMGCEPDRAS-YNIMVDAYGRAGLHE 335
+ EA +I + G + DR+S +++M +AG+ +
Sbjct: 660 VKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 703
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I L P +A+E F+ R +T + M+ L + ++F+ M+
Sbjct: 61 IHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQI 120
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------M 301
K N+ T+ A+ EG A ++ AGI + Y YN L +
Sbjct: 121 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 180
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
E YR++ M G P +Y++++ A+G+
Sbjct: 181 EVYRVM--MVDGVVPSVRTYSVLMVAFGK 207
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ G+ ++A + E+ +P TY L+ +G +A ++ E+
Sbjct: 970 LLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTK 1029
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
G P+ YN+ I G G+ A + RM C P++ TY + N
Sbjct: 1030 GWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPN 1078
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + LK + L++AE +F EM + G+ P + +++ I P KAVE F++M
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMP 238
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C P TY+ MI+ YG+A MALKL++ R+ K + + T++ L+ + G +
Sbjct: 239 EFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFD 298
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
++E+++ G++P++ YN L++A R + G +P +Y ++
Sbjct: 299 GCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALL 358
Query: 326 DAYGRA 331
AYGRA
Sbjct: 359 RAYGRA 364
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L++ Y MSG + V+ EM+ G+ P+ V+YN+ +D + + P +A I++ M
Sbjct: 283 TFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEM 342
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ QPS TY ++ YG+A + AL ++ EM+ + ++ Y L+ A G
Sbjct: 343 TNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYT 402
Query: 276 EEAEEIFEQLQGAG-IEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNI 323
EEA IFE ++ +G PD + +++L+ Y L + + G EP+
Sbjct: 403 EEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTS 462
Query: 324 MVDAYGRAG 332
++ YG+A
Sbjct: 463 LIQCYGKAN 471
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 88/168 (52%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE + E+L+ P T++ ++ +S L KA F +M ++G P V Y++ I
Sbjct: 194 RAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMI 253
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
D + GN A++++ R + + + T++ +I +YG + L ++ EM++ K
Sbjct: 254 DAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVK 313
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
PN+ Y L++A R +A+ I++++ G++P Y AL+ AY
Sbjct: 314 PNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAY 361
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A G+ +A+ Y E+ ++ P+ TYA LL+AY + E A V++EM++ G
Sbjct: 322 LLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKG 381
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMA 243
L S V+YN+ + G ++A IF+ MK C P + T++ +I +Y + K A
Sbjct: 382 LELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEA 441
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+ N M +PNI T+L+ + + +E F++L I PD
Sbjct: 442 EAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPD 491
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVV-YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A F RK P V+ YN + K N +A ++F M +P T++
Sbjct: 157 ETALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFST 216
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ +S A++ F +M C P+ TY+A+++A+ R G + A +++++ +
Sbjct: 217 IISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEK 276
Query: 290 IEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
D ++ L+ Y + +G +P+ YN ++DA GRA
Sbjct: 277 WRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRA 329
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P T++ L+ Y SG + +AEA+ M + G P+ V S I K + V
Sbjct: 418 CMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVV 477
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASK 239
F R+ P M+N+ ++ K
Sbjct: 478 RTFDRLLELDITPDDRFCGCMLNVMTQSPK 507
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +++ I T+ L+ A+ G +++A + +M G P + YN I L K
Sbjct: 510 YRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCK 569
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +K + +F+ M R PS T ++IN + A K AL+ +M P+I T
Sbjct: 570 TGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVT 629
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-----------EAYRLISRM 310
Y +L+N + G +EA +FE+LQ GI+PD YN L+ + L +
Sbjct: 630 YNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGV 689
Query: 311 HMGCEPDRASYNIMVDAYGRAGLHEGK 337
G P+ ++NI+V +G+ EG+
Sbjct: 690 ENGFVPNDVTWNILVYNFGKQSNSEGQ 716
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 133 SLHKKAEF-TYLELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
L KK F + LEL++ C P +TY +L+ +C G LE+A + REM G
Sbjct: 391 GLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSL 450
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ V YN+ I L K G +A+++F M C+P T+ +I + + AL L+
Sbjct: 451 NTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALY 510
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA---- 303
+M N T+ L++AF R G +EA ++ + G D YN L++A
Sbjct: 511 RDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKT 570
Query: 304 ------YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L M G P + NI+++ + AG
Sbjct: 571 GAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAG 606
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L++ F Y +++++ +P T++ L+ C GL A + +M G P+ Y
Sbjct: 362 LNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYT 421
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
IDG K G ++A I + M +T Y +I+ K K AL +F EM S
Sbjct: 422 ILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK 481
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
CKP+I T+ +L+ R E+A ++ + G+ + +N L+ EA
Sbjct: 482 GCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEA 541
Query: 304 YRLISRMHM-GCEPDRASYNIMVDAYGRAGLHE 335
+L++ M GC D +YN ++ A + G E
Sbjct: 542 LKLVNDMLFRGCPLDEITYNGLIKALCKTGAVE 574
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 43/241 (17%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A + ++L P + T+ L++KA CM ++ A + R+M K+G P++++Y + ID
Sbjct: 194 ASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLID 253
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM------- 250
L K +A+++ + M C P T+ +I + + ++ KL + M
Sbjct: 254 ALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP 313
Query: 251 --------RSHKCK----------------PNICTYTALVNAFAREGLCEEAEE-IFEQL 285
CK PN+ + LVN F R G EA +++++
Sbjct: 314 NDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373
Query: 286 QGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLH 334
G PDV+ ++ L+ A L++ M GC+P+ +Y I++D + + G
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433
Query: 335 E 335
E
Sbjct: 434 E 434
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 121 VSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
V LLI+ G + K + L++ + + E + L++K Y +GL +A + +M
Sbjct: 106 VYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM 165
Query: 181 RK-YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
+ Y PS YN +D L+ G P A +F M P+ T+ L++ ++
Sbjct: 166 KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNE 225
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A L +M H C PN Y L++A ++ +EA ++ E++ G PDV +N
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285
Query: 300 ----------LMEAYRLISRMHM-GCEPDRASYNIMV 325
++E +L+ RM + G P+ +Y ++
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLM 322
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 14/239 (5%)
Query: 105 QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKA 163
+L L K + IV + IL+++ YG+ L +A L++ C P+ +Y ++L
Sbjct: 125 RLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV 184
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+ A VF +M G+ P+ + + L A + + M + C P+
Sbjct: 185 LVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPN 244
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+ Y +I+ K + ALKL EM C P++ T+ ++ F R E ++ +
Sbjct: 245 SMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVD 304
Query: 284 QLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
++ G P+ Y LM EA L+S++ P+ +N +V+ + R G
Sbjct: 305 RMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP---GPNVVHFNTLVNGFVRNG 360
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY +LK C SG A + R+M + + AV Y+ IDGL K G+ A +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ + YT +I + A + KL +M K P++ ++AL++ F +
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
EG EAEE+ +++ GI PD Y +L++ + +L HM GC P+ +
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 321 YNIMVDAYGRAGL 333
+NI+++ Y +A L
Sbjct: 390 FNILINGYCKANL 402
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++ ++AE + E++ P TY L+ +C L+KA + M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ +N I+G K +E+F++M T TY +I + + K +A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF EM S + +P+I +Y L++ G E+A EIFE+++ + +E D+ YN ++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A+ L + + G +PD +YNIM+ + G
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L++ +C +G + + R+M K + P V +++ ID +K G ++A E+ + M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P T TYT +I+ + K ++ A + + M S C PNI T+ L+N + + L +
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMV 325
+ E+F ++ G+ D YN L++ + + ++ + E PD SY I++
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 326 DA 327
D
Sbjct: 465 DG 466
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ +C G LE A+ +F+EM + P V Y +DGL G P+KA+EIF+++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ + Y ++I+ ASK A LF + KP++ TY ++ ++G
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
EA+ +F +++ G P+ YN L+ R H+G E D +++ R G
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILI-------RAHLG-EGDATKSAKLIEEIKRCGFSV 595
Query: 336 GKCSYSLV 343
+ +V
Sbjct: 596 DASTVKMV 603
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ L+ C+ G + +A + M + G P+ + N+ ++GL G AV +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM QP+ TY ++ + K+ ++ +A++L +M K K + Y+ +++ +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G + A +F +++ G + D+ Y L+ + R G + PD +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 321 YNIMVDAYGRAG 332
++ ++D + + G
Sbjct: 320 FSALIDCFVKEG 331
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C G L +A+ +FR+M + G P+ YN I L G+ K+ ++
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 212 FQRMKRDCCQPSTETYTLMINLY--GKASKSFMAL 244
+ +KR T +++++ G+ KSF+ +
Sbjct: 585 IEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDM 619
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ A +F+EM + P + ++ + + +++ ++M+ + T ++M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
IN + K +A ++ +P+ T++ L+N EG EA E+ +++ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+P + NAL+ +A LI RM G +P+ +Y ++ ++G
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+L+S + + +L+ +C + A++VF + K+GL PS V YN+ ++G ++
Sbjct: 112 YKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 171
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + + M QP TY+++IN K SK A +LF+EM PN T
Sbjct: 172 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 231
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
+T L++ + G + A EI++Q+ + PD+ YN L+ +A+ LI M
Sbjct: 232 FTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 291
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
M G +PD+ +Y ++D + G
Sbjct: 292 MKGLKPDKITYTALIDGCCKEG 313
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C ++ A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 192 PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEI 251
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K A L +EM KP+ TYTAL++ +
Sbjct: 252 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCK 311
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG + A E +++ I D AY AL+ +A +++ M +G +PD +
Sbjct: 312 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDART 371
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 372 YTMIINEFCKKG 383
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 140 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 195
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 196 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQM 255
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 256 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDL 315
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 316 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 375
Query: 301 MEAY 304
+ +
Sbjct: 376 INEF 379
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +P TY L+ C G L++A + EM GL P + Y + IDG K
Sbjct: 252 YKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCK 311
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A E +RM ++ + YT +I+ + +S A K+ EM S KP+ T
Sbjct: 312 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDART 371
Query: 262 YTALVNAFAREG 273
YT ++N F ++G
Sbjct: 372 YTMIINEFCKKG 383
>gi|255660976|gb|ACU25657.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 376
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C +G ++K+ V + G A Y++ I+GL K N +AV + M
Sbjct: 96 TYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGM 155
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C+P+ Y +IN ASK A+++F EM + C P I TY L+N F + +
Sbjct: 156 IKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMF 215
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNIM 324
EA + ++L G++P V Y+ LME L ++ G +PD +NI+
Sbjct: 216 GEAYNLVKELLDKGLDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNIL 275
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKHY 350
+ G CS ++L++ Y
Sbjct: 276 I---------RGLCSVGKMQLALSLY 292
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 87/179 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI S + A + E+ C PT TY L+ +C + + +A + +E+ G
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKG 229
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y+ ++GL +A++++ ++ +P + + ++I K +AL
Sbjct: 230 LDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLAL 289
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ +M KC PN+ ++ L+ F ++G A I+ ++ G+EPD+ +YN +E
Sbjct: 290 SLYFDMNLWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEG 348
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F E++ S + ++ +++ +G +++ +++ M + G + Y + G
Sbjct: 45 FELWEMMGSEGNRSVSSFNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGF 104
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G K++ + + ++ Y+ MIN K + A+ + N M CKPN+
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 164
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
Y L+N E+A +F ++ P + YN L+ EAY L+
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKE 224
Query: 310 -MHMGCEPDRASYNIMVDA 327
+ G +P +Y+++++
Sbjct: 225 LLDKGLDPGVITYSMLMEG 243
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 165 CMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPST 224
C SG ++ AE V++E+ + + P AVVYN ++G + + E+++ M + + +
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 225 ETYTLMINLY--GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
T+M L+ GK + +L NE + TY LV+ F + G +++ +
Sbjct: 61 SFNTMMRGLFDNGKVDEVISIWELMNE---SGFVEDSRTYGILVHGFCKNGYIDKSLHVL 117
Query: 283 EQLQGAGIEPDVYAYNALMEAY-------RLISRMH----MGCEPDRASYNIMVDA 327
E + G D +AY+A++ R +S ++ GC+P+ YN +++
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLING 173
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K GL PS V +N+ I+G ++ G+ K + M
Sbjct: 139 FNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMH 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
P T T++IN K SK A +LFNEM PN T+T L++ + G +
Sbjct: 199 ASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ G PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGSCKEG 325
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 114/237 (48%), Gaps = 11/237 (4%)
Query: 79 SNTIWDAFD--SLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI--------LLIE 127
+ +++DA L P+ +++ LIN ++L L+K + M + +LI
Sbjct: 155 AQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLIN 214
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
++S +A + E+LD +P T+ L+ +C SG ++ A ++++M + G P
Sbjct: 215 GLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSP 274
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ YN+ I GL + G+ ++A ++ M +P TYT +I+ K A +L
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELR 334
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
M + + YTAL++ +EG +AE++ ++ G++P+ Y ++ +
Sbjct: 335 KRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGF 391
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T +L+ C +++A +F EM GL P+ V + + IDG K G A+EI
Sbjct: 204 PDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAF 269
+++M R P TY +I YG K + A L EM KP+ TYT L++
Sbjct: 264 YKQMLRQGYSPDLITYNTLI--YGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGS 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG E A E+ +++ I D AY AL+ +A +++ M +G +P+
Sbjct: 322 CKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPEN 381
Query: 319 ASYNIMVDAYGRAG 332
+Y ++++ + + G
Sbjct: 382 GTYTMIINGFCKQG 395
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A + EM GL P + Y + IDG K
Sbjct: 264 YKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E+ +RM + + YT +I+ + ++ A K+ EM S KP T
Sbjct: 324 EGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G + A ++ +++Q G P V
Sbjct: 384 YTMIINGFCKQGDVKTASKLLKEMQRDGHVPCV 416
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+++ + AYC G L++A F +M++ G P V Y + IDGL K G A+ F +M
Sbjct: 298 TFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM 357
Query: 216 KRDCCQPSTETYTLMIN---LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
D P+ T+T +I+ +YGK K A +LF EM P++ +TA+++ +E
Sbjct: 358 IDDGLSPNIITFTTLIHGFSMYGKWEK---AEELFYEMMDRGIPPDVTIFTAMIDRLFKE 414
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASY 321
G EA+++F+ + AG +P+V +YN ++ Y +L+ M + G +P ++
Sbjct: 415 GKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTF 474
Query: 322 NIMVDAYGRAGL 333
N ++D GL
Sbjct: 475 NTLLDGMVSMGL 486
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
S LL +K + AE ++ D C P +Y+ ++ + G + KA +F +M
Sbjct: 88 STLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKM 147
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+G+PP+ V NS IDGL K KA + Q+M + P+ TY +I+ Y + +
Sbjct: 148 LDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQW 207
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A+++ EM +PN+ TY L++ + G EA EIF + +G +PD Y +L
Sbjct: 208 TEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSL 267
Query: 301 MEAY 304
+ Y
Sbjct: 268 LHGY 271
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + H +A + ++ S P TY LL Y G L + V M +
Sbjct: 231 MLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQN 290
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ + ++ I K G +A F +M++ P TYT +I+ K + A
Sbjct: 291 GMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDA 350
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ F +M PNI T+T L++ F+ G E+AEE+F ++ GI PDV + A++
Sbjct: 351 MSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDR 410
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EA +L M G +P+ SYN M+ Y AG
Sbjct: 411 LFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAG 450
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA + ++LD P T ++ C ++KAEAV ++M
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS I G L G +AV I + M RD +P+ TY ++I+ K+ A
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++FN M KP+ TY +L++ +A EG E + + + G+ + + ++ + AY
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
I +G PD +Y ++D + G
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I AY + +A T++++ +P TY ++ C G L+ A + F +M GL
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P+ + + + I G G +KA E+F M P +T MI+ K K A K
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
LF+ M KPN+ +Y +++ + G E ++ + + G++P +N L++
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM- 481
Query: 306 LISRMHMGCEPDRASYNIMVDA 327
+ MG +PD + ++D+
Sbjct: 482 ----VSMGLKPDVDTCKTLIDS 499
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
P +++C S+ I+ + KAE +++D +P TY L+ Y SG +A
Sbjct: 153 PPNVVTCNSV--IDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEA 210
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+ +EM + G P+ V YN ID L K G +A EIF M + +P TY +++
Sbjct: 211 VRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHG 270
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
Y + + M + + N T++ + A+ + G +EA F ++Q G PD
Sbjct: 271 YATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPD 330
Query: 294 VYAYNALMEAYRLISRM 310
+ Y +++ I R+
Sbjct: 331 IVTYTTVIDGLCKIGRL 347
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 157 YALLLKAYCMSGLLEKA-EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+ LL+ C A V R M + G P Y++ + GL ++A E+ M
Sbjct: 51 FTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMM 110
Query: 216 KRDC--CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
D C P +Y+ +I+ + K A LF +M H PN+ T ++++ +
Sbjct: 111 AEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ 170
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYN 322
++AE + +Q+ I P+ YN+L+ EA R++ M G P+ +YN
Sbjct: 171 AMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYN 230
Query: 323 IMVDAYGRAGLH 334
+++D ++G H
Sbjct: 231 MLIDCLCKSGFH 242
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++LD R P TY ++ A C + ++KA V M K G+ P + YNS + G G
Sbjct: 106 KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 165
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
P++A+ ++M+ D +P TY +++ K + A K+F+ M KP+I TY
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ +A +G E + + + GI P+ Y ++ L+ EA + S+M
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSY 340
G P+ +Y ++D ++G E Y
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 128/309 (41%), Gaps = 50/309 (16%)
Query: 90 PPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLD 147
PP ++ +IN + L+K D + + V+ +I A + KA ++
Sbjct: 85 PPDVVSYSTVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S +P TY ++ +C SG ++A ++MR G+ P V YNS +D L K G +
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 208 AVEIFQRMKRDCCQPSTETY-----------------------------------TLMIN 232
A +IF M + +P TY ++++
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y K K A+ +F++MR PN TY +++ + G E+A FEQ+ G+ P
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324
Query: 293 DVYAYNALMEAYRLISRMHMGCE-----PDRAS------YNIMVDAYGRAG--LHEGKCS 339
D YN+L+ + + + E DR +N ++D++ + G + GK
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384
Query: 340 YSLVELSVK 348
+V + VK
Sbjct: 385 DLMVRIGVK 393
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYT 228
E A VF E+ + G+P YN ++GL Q+A+E+ M D C P +Y+
Sbjct: 34 EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+IN + K ++M + PN+ TY +++ A + ++A E+ + +
Sbjct: 93 TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 289 GIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G+ PD YN+++ EA + +M G EPD +YN ++D + G
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 200
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 79/154 (51%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY +E+A VF +MR+ GL P+AV Y + ID L K G + A+
Sbjct: 254 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + +P + Y +I+ K A +LF EM + + +++++ +
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
EG E+ ++F+ + G++PD+ + + R
Sbjct: 374 EGRVIESGKLFDLMVRIGVKPDIITLGRFLGSAR 407
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ AY ++ ++A + ++ P TY ++ C SG +E A F +M
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFM 242
GL P ++VYNS I L +KA E+F M R C ST + +I+ + K +
Sbjct: 321 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL-STIFFNSIIDSHCKEGRVIE 379
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ KLF+ M KP+I T + + R+
Sbjct: 380 SGKLFDLMVRIGVKPDIITLGRFLGSARRD 409
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 187 PSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKL 246
P YN + GL K A+ +FQ + + T+ +MI+ K ++ A L
Sbjct: 450 PFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509
Query: 247 FNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
F S+ PN TY + +GL EE +++F ++ G D
Sbjct: 510 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 556
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++L C + L + A +F+ + L A +N ID LLK G +A ++
Sbjct: 450 PFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509
Query: 212 FQRMKRDCCQPSTETYTLMI-NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
F + P+ TY LM N+ G+ + +LF M + C + + ++N
Sbjct: 510 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD-QLFLSMEDNGCTVD----SGMLNFIV 564
Query: 271 REGL 274
RE L
Sbjct: 565 RELL 568
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+ + C P TY L+ C G + +A+ +F+EM + G S V Y S I GL +
Sbjct: 179 FQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQ 238
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
N +A+ + + MKR+ +P+ TY+ +++ K S A++L M PN+ T
Sbjct: 239 SNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVT 298
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
Y+ L+N +E EA EI ++++ G++P+ Y ++ EA I M
Sbjct: 299 YSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMV 358
Query: 312 M-GCEPDRASYNIMV 325
+ G P+RAS+++ V
Sbjct: 359 LGGISPNRASWSLHV 373
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP-QKAVE 210
PT+ Y +L +++A +REMR+ G+P S V N I L K A+
Sbjct: 118 PTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALR 177
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
IFQ M CQP + TY +IN + A +LF EM ++ TYT+L++
Sbjct: 178 IFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLC 237
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EA + E+++ IEP+V+ Y++LM+
Sbjct: 238 QSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDG 270
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C S L++A + EM++ + P+ Y+S +DGL KGG+ +A+++ + M
Sbjct: 228 TYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVM 287
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TY+ +IN K K A+++ + MR KPN Y +++ G
Sbjct: 288 DKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSY 347
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-MHMGCEPDRA 319
+EA +++ GI P+ +++ + + ++ + + +P RA
Sbjct: 348 QEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRA 392
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 159 LLLKAYCMSG-LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
+L+KA C + ++ A +F+EM G P + Y + I+GL + GN +A E+F+ M++
Sbjct: 160 ILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQ 219
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
S TYT +I+ +++ A+ L EM+ + +PN+ TY++L++ + G +
Sbjct: 220 KGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQ 279
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVD 326
A ++ E + P++ Y+ L+ EA ++ RM + G +P+ Y ++
Sbjct: 280 AMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIIS 339
Query: 327 AYGRAGLHEGKCSY 340
AG ++ ++
Sbjct: 340 GLCAAGSYQEAANF 353
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 8/178 (4%)
Query: 132 KSLHKKAEFTYLELLDSRC-IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
K H LE++D + +P TY+ L+ C L +A + MR GL P+A
Sbjct: 273 KGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAG 332
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF-------MA 243
+Y I GL G+ Q+A M P+ +++L + ++ + A
Sbjct: 333 LYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRA 392
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+L+ MR+ I T+ LV F + G +A I E++ G PD +N ++
Sbjct: 393 FQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVI 450
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ +RMK++ C + + + + YG+ + A+++F++M + +P Y +++
Sbjct: 72 MLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILV 131
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALME-----------AYRLISRM-HMGCEPDR 318
E + A + +++ GI V + N L++ A R+ M + GC+PD
Sbjct: 132 EENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDS 191
Query: 319 ASYNIMVDAYGRAG 332
+Y +++ R G
Sbjct: 192 YTYGTLINGLCRLG 205
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 146 LDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+ +RCI E DT+ L+K +C G L KA + EM G P V+N I GL
Sbjct: 399 MRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKK 458
Query: 205 PQKAVE 210
++A E
Sbjct: 459 VREATE 464
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 89 LPPTHATWDDLIN-----------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
L P H ++ +IN ++Q ++ + +++C +++ + + K+
Sbjct: 41 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVM--DGLFKVGKTKE 98
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + +L P TY+ LL YC G +E AE V ++M K +PP+ + ++S I+
Sbjct: 99 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 158
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G KAV++ + M + P+T Y ++I+ Y KA + +A EM+S + +
Sbjct: 159 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 218
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + L+N R G +EA + + GI+PD+ Y +L++ Y
Sbjct: 219 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 265
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +L+ C +G +EKAE+ EM P+ + + + + K ++
Sbjct: 342 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 401
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I +++ + S Y +I ++ + + A + +EM ++ TY AL+ +
Sbjct: 402 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 461
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------------EAYRLISRMH-MGCE 315
E+A + + Q+ GI P++ YN L+ E +L+S M+ G
Sbjct: 462 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 521
Query: 316 PDRASYNIMVDAYGRAG 332
P+ A+Y+I+V YGR G
Sbjct: 522 PNAATYDILVSGYGRVG 538
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T + +L +C G L +A +FREM + GL P+ V Y + I+ L K G +A
Sbjct: 7 MPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFN 66
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ +M T T +++ K K+ A ++F + PN TY+AL++ +
Sbjct: 67 LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYC 126
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRA 319
+ G E AE + ++++ + P+V +++++ Y L + P+
Sbjct: 127 KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTI 186
Query: 320 SYNIMVDAYGRAG 332
Y I++D Y +AG
Sbjct: 187 VYAILIDGYFKAG 199
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G ++AE VF + K L P+ V Y++ +DG K G + A + Q+M+++ P+ T+
Sbjct: 94 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 153
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+ +IN Y K A+ + EM PN Y L++ + + G + A++ ++++
Sbjct: 154 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 213
Query: 288 AGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+E ++ L+ + + RM G +PD +Y ++D Y + G
Sbjct: 214 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 269
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +KAE E+L +PT T+ L+KAY S +K + ++
Sbjct: 350 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 409
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL S VYN+ I + G +KA + M + TY +I Y S A
Sbjct: 410 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 469
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGL----CEEAEEIFEQLQGAGIEPDVYAYNA 299
LK +++M PNI TY L+ + GL EE E++ ++ G+ P+ Y+
Sbjct: 470 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 529
Query: 300 LMEAY--------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
L+ Y +I + M G P +YN+++ Y ++G
Sbjct: 530 LVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSG 573
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + + +KA+ E++ TY L++ YC +EKA + +M G
Sbjct: 421 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 480
Query: 185 LPPSAVVYNSYIDGLLKGG----NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ P+ YN+ + GL G ++ ++ M P+ TY ++++ YG+
Sbjct: 481 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 540
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ L EM + P + TY L++ +A+ G EA E+ L G P+ + Y+ L
Sbjct: 541 KKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 600
Query: 301 MEAYRLISRMHMGCEP--DRA---SYNIMVDAY----GRAGLHEGK 337
+ +++ EP DR+ SY I V GR GL K
Sbjct: 601 TCGW-----LNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLKFSK 641
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P V +S + G + G +A +F+ M P+ +Y +IN K+ + A
Sbjct: 5 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L ++M +I T T +++ + G +EAEE+FE + + P+ Y+AL++
Sbjct: 65 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 124
Query: 304 YRLISRMHMG-----------CEPDRASYNIMVDAYGRAGL 333
Y + +M + P+ +++ +++ Y + G+
Sbjct: 125 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGM 165
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN------- 204
P YA L+ Y G A ++ +EM++ + V YN+ I GLL+ G
Sbjct: 253 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC 312
Query: 205 -------------PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMR 251
+ A++I MK P+ TY ++I K A +EM
Sbjct: 313 SRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEML 372
Query: 252 SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY-RL-ISR 309
+ P T+ LV A++R ++ +I E+L +G+E + YN L+ + RL ++R
Sbjct: 373 VMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTR 432
Query: 310 MHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+ I D L G C+ S VE ++K Y
Sbjct: 433 KAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTY 473
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ KK ++E++ +PT TY +L+ Y SG + +A + ++
Sbjct: 529 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 588
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
G P++ Y+ G L N EI + +KR
Sbjct: 589 GRIPNSFTYDILTCGWL---NLSYEPEIDRSLKR 619
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 15/188 (7%)
Query: 154 EDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQ 213
E TY L+K YC G +A + EM ++GL PS + Y S I + K GN +A+E
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+M+ P+ TYT +++ G + K +M A ++ EM + P++ TY AL+N
Sbjct: 370 QMRVRGLCPNERTYTTLVD--GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A + E ++ G+ PDV +Y+ ++ EA R+ M G +PD +
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 321 YNIMVDAY 328
Y+ ++ +
Sbjct: 488 YSSLIQGF 495
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 143 LELLDSRCI----PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDG 198
+E LD + P E TY L+ + G + +A V REM G PS V YN+ I+G
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
G + A+ + + MK P +Y+ +++ + ++ AL++ EM KP+
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLIS 308
TY++L+ F + +EA +++E++ G+ PD + Y AL+ AY +L +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 309 RM-HMGCEPDRASYNIMVDAYGR 330
M G PD +Y+++++ +
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNK 567
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ + QK +A E+ D+ P+ TY L+ +C++G +E A AV +M++ G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V Y++ + G + + +A+ + + M +P T TY+ +I + + ++ A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L+ EM P+ TYTAL+NA+ EG E+A ++ ++ G+ PDV Y+ L+
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVD 326
EA RL+ ++ + P +Y+ +++
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ C G +++ V EM + G V YN+ I G K GN +A+ +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R PS TYT +I+ KA A++ ++MR PN TYT LV+ F++
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
+G EA + ++ G P V YNAL+ + + +M G PD S
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 321 YNIMVDAYGRA 331
Y+ ++ + R+
Sbjct: 453 YSTVLSGFCRS 463
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Y ++ +A + E+L P+ TY L+ + C +G + +A +MR G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ Y + +DG + G +A + + M + PS TY +IN + K A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +M+ P++ +Y+ +++ F R +EA + ++ GI+PD Y++L++ +
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 305 RLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
R C+ PD +Y +++AY G
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P TY L+ YC ++ + R M GL P+ + YN I+GL + G ++
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS 295
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ M R TY +I Y K AL + EM H P++ TYT+L+++
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDR 318
+ G A E +Q++ G+ P+ Y L+ EAYR++ M+ G P
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 319 ASYNIMVDAYGRAGLHE 335
+YN +++ + G E
Sbjct: 416 VTYNALINGHCVTGKME 432
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 14/251 (5%)
Query: 95 TWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSR-CIPT 153
T DD V L + +D S V L++++Y + SL KA + + L + +P
Sbjct: 110 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKA-LSIVHLAQAHGFMPG 168
Query: 154 EDTYALLLKAYCMSGL-LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
+Y +L A S + AE VF+EM + + P+ YN I G GN A+ +F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+M+ C P+ TY +I+ Y K K KL M +PN+ +Y ++N RE
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLISRMHM---GCEPDRASY 321
G +E + ++ G D YN L++ Y L+ M G P +Y
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 322 NIMVDAYGRAG 332
++ + +AG
Sbjct: 349 TSLIHSMCKAG 359
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y+ +L +C S +++A V REM + G+ P + Y+S I G + ++A ++
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ M R P TYT +IN Y AL+L NEM P++ TY+ L+N +
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME---------AYRLI--------------- 307
+ EA+ + +L P Y+ L+E LI
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 308 --SRMHMGCEPDRASYNIMVDAYGRAG 332
S + +PD +YNIM+ + RAG
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAG 654
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+++ P TY+ L++ +C ++A ++ EM + GLPP Y + I+ G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY- 262
+ +KA+++ M P TY+++IN K S++ A +L ++ + P+ TY
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 263 --------------TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+L+ F +G+ EA+++FE + G +PD AYN ++ +
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 50/208 (24%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++ K+A Y E+L P E TY L+ AYCM G LEKA + EM + G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 185 LPPSAVVYNSYIDGL--------------------------------------------- 199
+ P V Y+ I+GL
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 200 -LKG----GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
+KG G +A ++F+ M +P Y +MI+ + +A A L+ EM
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIF 282
+ T ALV A +EG E +
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 55/134 (41%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + K + +A+ + +L P Y +++ +C +G + KA +++EM K G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V + + L K G + + + R C E +++ + + + L
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 245 KLFNEMRSHKCKPN 258
+ EM PN
Sbjct: 731 DVLAEMAKDGFLPN 744
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++LD R P TY ++ A C + ++KA V M K G+ P + YNS + G G
Sbjct: 106 KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 165
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
P++A+ ++M+ D +P TY +++ K + A K+F+ M KP+I TY
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ +A +G E + + + GI P+ Y ++ L+ EA + S+M
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSY 340
G P+ +Y ++D ++G E Y
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 128/309 (41%), Gaps = 50/309 (16%)
Query: 90 PPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLD 147
PP ++ +IN + L+K D + + V+ +I A + KA ++
Sbjct: 85 PPDVVSYSTVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S +P TY ++ +C SG ++A ++MR G+ P V YNS +D L K G +
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 208 AVEIFQRMKRDCCQPSTETY-----------------------------------TLMIN 232
A +IF M + +P TY ++++
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y K K A+ +F++MR PN TY +++ + G E+A FEQ+ G+ P
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324
Query: 293 DVYAYNALMEAYRLISRMHMGCE-----PDRAS------YNIMVDAYGRAG--LHEGKCS 339
D YN+L+ + + + E DR +N ++D++ + G + GK
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384
Query: 340 YSLVELSVK 348
+V + VK
Sbjct: 385 DLMVRIGVK 393
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYT 228
E A VF E+ + G+P YN ++GL Q+A+E+ M D C P +Y+
Sbjct: 34 EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+IN + K ++M + PN+ TY +++ A + ++A E+ + +
Sbjct: 93 TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 289 GIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G+ PD YN+++ EA + +M G EPD +YN ++D + G
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 200
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY +E+A VF +MR+ GL P+AV Y + ID L K G + A+
Sbjct: 254 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + +P + Y +I+ K A +LF EM + + +++++ +
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDV 294
EG E+ ++F+ + G++PD+
Sbjct: 374 EGRVIESGKLFDLMVRIGVKPDI 396
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ AY ++ ++A + ++ P TY ++ C SG +E A F +M
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFM 242
GL P ++VYNS I L +KA E+F M R C ST + +I+ + K +
Sbjct: 321 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL-STIFFNSIIDSHCKEGRVIE 379
Query: 243 ALKLFNEMRSHKCKPNICT 261
+ KLF+ M KP+I T
Sbjct: 380 SGKLFDLMVRIGVKPDIIT 398
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E Y ++ C G +KA + R M + P +YN ID K G A
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGAT 233
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ MK+ P TYT +I+ GK S+ LF EM P++CT+ ++++
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDR 318
+EG E+AEEI + G+EP+ YN +M+ Y L +M G EPD
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDI 353
Query: 319 ASYNIMVDAY 328
SY +++ Y
Sbjct: 354 ISYTALINGY 363
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ G+ S +K +LE++ P T+ ++ C G +E AE + M + G
Sbjct: 254 LIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKG 313
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ + YN +DG G +A IF M +P +YT +IN Y + K A+
Sbjct: 314 VEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAM 373
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+LF E+ + KP+I T + L+ G E A+ F+++Q AG P++Y + L+ Y
Sbjct: 374 QLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGY 433
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ Y + +A + ++D P +Y L+ Y ++KA +FRE+ +
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS V + + GL + G + A F M+ P+ T+ ++ Y K A
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ F+++ + NI YTA++N + G ++A FE+L G+ PDV Y A++
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 302 --------EAYRLISRMH-MGCEPDRASYNIMVDAYGRA 331
EA ++ +M GC PD +YN++V + R+
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRS 541
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+C+ ++I+A+ + + A E+ P TY L+ EK +F
Sbjct: 213 TCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFL 272
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM + P +NS IDGL K G + A EI M +P+ TY ++++ Y
Sbjct: 273 EMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRG 332
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
+ A ++F+ M +P+I +YTAL+N + + ++A ++F ++ G++P + +
Sbjct: 333 QMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCS 392
Query: 299 ALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
L+ + R G P+ ++ ++ Y + GL E S+
Sbjct: 393 VLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSH 445
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 151 IPTEDTYAL--LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
IP D +AL ++ + C+ + +V K G+P + V + + I GL + A
Sbjct: 103 IPV-DAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDA 161
Query: 209 VEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
V +F+++ R+ C+P Y +++ K + A L M KP+ C Y +++
Sbjct: 162 VHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVID 221
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEP 316
AF ++G+ + A + +++ I PD+ Y +L++ +S+ +H+ P
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYP 281
Query: 317 DRASYNIMVDAYGRAG 332
D ++N ++D + G
Sbjct: 282 DVCTFNSVIDGLCKEG 297
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ + E+ + IP T+ LL Y +GL+E+A + F ++ + + +Y + I+
Sbjct: 407 AKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIN 466
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL K G KA F+++ P TYT MI+ Y + A + +M + C P
Sbjct: 467 GLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLP 526
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ TY +V F R E + +++ G + LM+
Sbjct: 527 DNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
L+ A ++FR+M PSAV ++ + L+ + V IF+ + + +
Sbjct: 53 LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112
Query: 230 MIN---LYGKASKSFMALKLFNEMRSHKCKP-NICTYTALVNAFAREGLCEEAEEIFEQL 285
++N L + F L + K P N T+T L+ E ++A +F++L
Sbjct: 113 VVNSCCLMHRTDLGFSVLAI----HFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168
Query: 286 QGAGI-EPDVYAYNALME----------AYRLISRMHMG-CEPDRASYNIMVDAYGRAGL 333
I EPD Y +M+ A+ L+ M G +PD YNI++DA+ + G+
Sbjct: 169 VRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGM 228
Query: 334 HEGKCSYSLVELSVKHYP 351
+G S L E+ K+ P
Sbjct: 229 LDGATSL-LNEMKQKNIP 245
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y +K +A Y E+ D P E TY L+K Y + A A+ EMR+ G
Sbjct: 436 LLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNG 495
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ YN I+GL + E+ +R + P+T TY +IN + KA A
Sbjct: 496 VSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAF 555
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +MR PNI TYT+ ++ + R C+ A ++ ++ GI+PD+ AYNA ++ +
Sbjct: 556 GMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTF 615
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAY 328
L+ + G PD YN V Y
Sbjct: 616 CKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 22/258 (8%)
Query: 91 PTHATWDDLINVSVQLRLNKKW----DPIVLMS------CVSILLIEAYGQKSLHKKAEF 140
P T+ +++V V++R + D ++L + ++ +L+ Y KA
Sbjct: 253 PWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALD 312
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ E++ PT TY +L+K G+ ++ + R+M + GL PS +N I GLL
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL 372
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ + A+ + ++ D P TY +I+ K K A+ L+++M+ KP+I
Sbjct: 373 RDKRWKDAIGLL-KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
TY +L+ + +G +EA +++ ++ G P+ Y LM+ AY L++ M
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491
Query: 311 HM-GCEPDRASYNIMVDA 327
G +YNI+++
Sbjct: 492 RQNGVSCGDYTYNILING 509
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y + +C G + +A + K GL P VYNS++ G +A +
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + TE YT +I+ + K AL+L++EM ++ P+ T+TAL + R
Sbjct: 663 YYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCR 722
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G + A+ + + ++ + P++ YN L+ EA++L M G PD +
Sbjct: 723 SGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782
Query: 321 YNIM 324
Y+I+
Sbjct: 783 YDIL 786
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 46/242 (19%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
K L+L+ +P TY L+ C L +A ++ +M++ G+ PS V Y+S +
Sbjct: 378 KDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G + G +A++++ M P+ TYT ++ Y K A L NEMR +
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497
Query: 257 -----------------------------------PNICTYTALVNAFAREGLCEEAEEI 281
P TY +++N F + G+ A +
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557
Query: 282 FEQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGR 330
+ Q++ GI P++ Y + ++ Y LI G +PD A+YN +D + +
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617
Query: 331 AG 332
G
Sbjct: 618 QG 619
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 11/197 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PT TY ++ + +G++ A ++R+MRK G+ P+ V Y S+IDG + AV+
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVK 591
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++RD QP Y I+ + K AL + P++ Y + V +
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYK 651
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRA 319
+ EA + + + + D Y L++ + + + E PD
Sbjct: 652 NLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDK 711
Query: 320 SYNIMVDAYGRAGLHEG 336
++ + R+G +G
Sbjct: 712 TFTALTHGLCRSGDIDG 728
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q ++ + F L LL P Y + Y ++ +A + M K +
Sbjct: 618 QGNMSRALHFLVL-LLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTE 676
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y + IDG K GN A+E++ M + P +T+T + + ++ A +L ++M
Sbjct: 677 IYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R PNI TY L+NA R+G +EA ++ +++ +G+ PD Y+ L
Sbjct: 737 RRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 11/186 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I A + +H A + E+ + P E YA+ + C ++A V +MR+
Sbjct: 190 VVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREA 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM------KRDCCQPSTETYTLMINLYGKA 237
G P + Y+S +D L+K +A+ + +M K D + + +N G+
Sbjct: 250 GFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLN--GEV 307
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
K AL LF+E+ S P TY L+ EG+ +E ++ Q+ G+ P Y +
Sbjct: 308 GK---ALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEF 364
Query: 298 NALMEA 303
N +++
Sbjct: 365 NLVIKG 370
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 1/164 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++ +P + LL + A +F EMR G A +Y+ I ++
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG AV +F M +P Y + I+ K + AL++ +MR +P T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 262 YTALVNAFAREGLCEEAEEIFEQ-LQGAGIEPDVYAYNALMEAY 304
Y+++V+ + +EA + +Q L G + DV LM Y
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGY 301
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 130 GQKSLHKKAEFT--YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
G K+L AE + Y ++ R + + Y L+ + G + A ++ EM + P
Sbjct: 649 GYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIP 708
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ + GL + G+ A + M+R P+ TY ++IN + K A +L
Sbjct: 709 DDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLH 768
Query: 248 NEMRSHKCKPNICTYTAL 265
+EM S P+ TY L
Sbjct: 769 DEMLSSGVVPDDTTYDIL 786
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 67 QQILRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSV---QLRLNKKWDPIVLMSCVSI 123
Q+IL ++ E T+ + L + +T D+ V +++ N + L + V
Sbjct: 186 QEILEIMENEGIEATVG-TYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAV-- 242
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
I AY + ++A E + + P E TY +L+K +C G +E AE + +M+
Sbjct: 243 --INAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQ 300
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR---------------DCCQ----PST 224
G+ + +++N+ IDG + G A++I M++ C+ P+
Sbjct: 301 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNY 360
Query: 225 ETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ 284
TYT +I+++ K A +LF EM P++ TY+ +++ +A++G EAE ++
Sbjct: 361 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKE 420
Query: 285 LQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGL 333
++ G PDVY Y +L+ A +L M G EP+ +Y ++ + G
Sbjct: 421 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 480
Query: 334 HE 335
E
Sbjct: 481 SE 482
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY L+ +C G + +A +FREM + G PS + Y+ I G K G ++A
Sbjct: 357 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAER 416
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M++ P TY +++ + K +ALKLF EM+ +PN+ YTAL++ A
Sbjct: 417 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 476
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+EG E A ++++ + AG+ PD Y+AL+
Sbjct: 477 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
++++ C SG ++ A + +M ++G+ +A+ YNS +D ++ + + EI + M+
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
+ + + TYT++++ A LFNEM+++ ++ YTA++NA+ R G
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254
Query: 278 AEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVD 326
A ++ ++ G G+EP+ Y L++ + I +M G ++ +N M+D
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 314
Query: 327 AYGRAGL 333
Y R G+
Sbjct: 315 GYCRKGM 321
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A + E+ + P+ TY++++ Y G + +AE +EM K G P Y S +
Sbjct: 378 EARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLV 437
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G A+++F+ MK+ +P+ YT +I+ K +S A +L+++M
Sbjct: 438 HGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLI 497
Query: 257 PNICTYTALVNAF 269
P+ Y+ALV +
Sbjct: 498 PDDSLYSALVGSL 510
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 83 WDAFDSLPPTHATWDDLINVSVQLR--LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEF 140
+ + +L H D++ R K P VL V +I Y +K ++AE
Sbjct: 360 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSV---MIHGYAKKGRIREAER 416
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
E+ +P TYA L+ +C++G ++ A +F EM++ G P+ V Y + I GL
Sbjct: 417 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 476
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMI 231
K G + A +++ M + P Y+ ++
Sbjct: 477 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ LLL+ + + + ++ +M + G+ Y+ Y+D L K G P KA ++
Sbjct: 175 PGTKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAKDLHSYSIYMDALAKSGKPWKAFKV 234
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ MK+ + T Y I+ G A A++L+ +M CKPNI TY A++ F +
Sbjct: 235 FKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCK 294
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------EAYRLISRM-HMGCEPDRASYNI 323
EG +E +Q++ G +PDV Y+ E L +M GC+P +Y +
Sbjct: 295 EGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYLSRPQEVLGLFEKMLERGCQPRMDTYVM 354
Query: 324 MVDAYGRAGL 333
++ +GR G
Sbjct: 355 LIKRFGRWGF 364
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I A G A Y +++D+ C P TY ++K +C G ++ A ++MRK G
Sbjct: 254 IHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGC 313
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P + Y+ + L PQ+ + +F++M CQP +TY ++I +G+
Sbjct: 314 KPDVLTYHCFFQYL---SRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFI 370
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
++ M P+ Y AL++A ++G+ + A + E++ G+ P
Sbjct: 371 VWKAMEEQGLSPDAFAYNALIDALLQKGMVDLARKYDEKMLAKGLSP 417
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 146 LDSRCIPTE-DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+D R + + +Y++ + A SG KA VF+EM++ G+ V YN+ I +
Sbjct: 203 MDRRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQG 262
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA--------------------------- 237
AV ++++M C+P+ TY +I L+ K
Sbjct: 263 VDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHC 322
Query: 238 -----SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
S+ L LF +M C+P + TY L+ F R G +++ ++ G+ P
Sbjct: 323 FFQYLSRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSP 382
Query: 293 DVYAYNALMEA 303
D +AYNAL++A
Sbjct: 383 DAFAYNALIDA 393
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 23/257 (8%)
Query: 88 SLPPTHATWDDLINV-----------SVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHK 136
+LPPT AT +++ S+ L + DP L + LL +L
Sbjct: 66 NLPPTAATLARAVDILGKHFEFPLATSLLLSHHDPGDPTFLRPALRALL-NRLAAANLID 124
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
A + S + E ++ +L+ A C +++A+ + PP +N +
Sbjct: 125 DALHAFESTAASIGLCDEVSFHILVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLL 184
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G K + +++ M R +Y++ ++ K+ K + A K+F EM+ +
Sbjct: 185 RGWAKAHAWARLRQLWFDMDRRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIR 244
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
+ Y ++A + A ++ Q+ AG +P++ YNA++ E Y
Sbjct: 245 IDTVAYNTAIHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAF 304
Query: 307 ISRMH-MGCEPDRASYN 322
+ +M GC+PD +Y+
Sbjct: 305 VQQMRKTGCKPDVLTYH 321
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P + TY +L C SG A + R+M + P V Y ID L K G A+
Sbjct: 226 CQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDAL 285
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F M+ + + TY +I + + +L +M + K PN+ T++AL+++
Sbjct: 286 SFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDR 318
+EG EA++++ ++ GIEP+ YN+L+ EA +++ M GC+PD
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405
Query: 319 ASYNIMVDAYGRA 331
+YNI+++ + +A
Sbjct: 406 WTYNILINGFCKA 418
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ LL C+ G + +A + M P + N+ ++GL +AV++
Sbjct: 158 PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDL 217
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM + CQP+ TY ++N K+ + AL L +M K KP++ TYT +++ +
Sbjct: 218 IARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCK 277
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G ++A F +++ GI+ +V+ YN+L+ ++ R G + P+ +
Sbjct: 278 DGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVT 337
Query: 321 YNIMVDAYGRAG-LHEGKCSYS 341
++ ++D+ + G L E K Y+
Sbjct: 338 FSALIDSLVKEGKLTEAKDLYN 359
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + P T++ L+ + G L +A+ ++ EM G+ P+ + YNS I GL
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A ++ M C P TY ++IN + KA + ++LF +M + TY+
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYS 444
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM- 312
L+ F + A+++F+++ G+ P + Y L+ EA ++ +MH
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC 504
Query: 313 GCEPDRASYNIMV 325
E D YNI++
Sbjct: 505 KMELDIGIYNIII 517
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 16/253 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WDD + + K +V S LI++ ++ +A+ Y E++ P
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSA----LIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ C L++A + M G P YN I+G K + +F++M
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
T TY+ +I + ++ K +A K+F EM S P I TY L++ G
Sbjct: 432 SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
EEA I +Q+ +E D+ YN ++ +A+ L + G + D SYNIM
Sbjct: 492 EEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIM 551
Query: 325 VDAY-GRAGLHEG 336
+ R+ L E
Sbjct: 552 LSGLCKRSSLSEA 564
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY+ L++ +C S L A+ VF+EM G+ P + Y +DGL G ++A+ I +M
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + Y ++I+ A+K A LF + S K +I +Y +++ +
Sbjct: 502 HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSL 561
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRASYNIM 324
EA+ +F +++ G EPD YN L+ A+ +LI M G D ++ I+
Sbjct: 562 SEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIV 621
Query: 325 VDAYGRAGLHE 335
+D L +
Sbjct: 622 MDMLSSGELDK 632
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++L+ S+ C P TY +L+ +C + ++ +FR+M G+ V Y++ I G +
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP--NI 259
A ++FQ M P TY ++++ + AL + ++M HKCK +I
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM--HKCKMELDI 510
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN----------ALMEAYRLISR 309
Y +++ ++A +F L G++ D+ +YN +L EA L +
Sbjct: 511 GIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRK 570
Query: 310 MHM-GCEPDRASYNIMVDAYGRAGLHEGKCSYSLVE 344
M G EPD +YN ++ A+ R ++ S L+E
Sbjct: 571 MKEDGYEPDGCTYNTLIRAHLRG--NDITTSVQLIE 604
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + Q A+ + E++ P TYA+LL C +G LE+A + +M K
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ +YN I G+ A +F + + ++Y +M++ K S A
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
LF +M+ +P+ CTY L+ A R + ++ E+++ G D +M+
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD-- 623
Query: 305 RLISRMHMGCEPDRASYNIMVDAYG 329
M E D++ N++ +G
Sbjct: 624 -----MLSSGELDKSFLNMLSGPFG 643
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ A A+F+ M + P+ + +N L + + + ++M+ T +M
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
IN + + K A ++ +PN T+ L+N EG EA E+ + + +
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 291 EPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
PD+ N ++ EA LI+RM GC+P++ +Y +++ ++G
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSG 244
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +PT TY L+ C+ G E A +F+ M +G PS YN I
Sbjct: 365 YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCL 424
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ QKA+ IF +M + P+ TY +I Y K A++L M+ + KP+ T
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------M 310
YT L++ F+R G E A +F + GI P+ Y A+++ Y +++ +
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544
Query: 311 HMGCEPDRASYNIMVDAYGRA 331
G P +YN+M+ + +
Sbjct: 545 ESGNLPSSQTYNVMISGFSKT 565
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ + G LE A ++F M ++G+ P+ V Y + IDG A+ +
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M PS++TY +MI+ + K + A +M PN+ TYT+ ++ R
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM------------EAYRLISRM-HMGCEPDR 318
G A +IF +++ P++Y Y++L+ E Y L++R+ H GCEP+
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV 659
Query: 319 ASYNIMVDAYGRAGLHEGKC 338
+Y +V G G EG+C
Sbjct: 660 DTYTTLVK--GLCG--EGRC 675
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ C G LE+A + EM + G+ P+ Y + L G +AV
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ +MK+ C P+ +T+T +I+ + K +A+ L+++M + P TY AL+N
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
EG E A IF+ + G P YN +++ + L+ + G P+
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447
Query: 319 ASYNIMVDAYGRAG 332
+YN ++ Y + G
Sbjct: 448 ITYNTLIYGYCKQG 461
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P T+ L+ G E A ++ +M GL P+ V YN+ I+ L G + A
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
IF+ M PST+TY +I + A+ +F++M PN+ TY L+ +
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
++G A + E ++G G++PD + Y L+ + M G P+
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 319 ASYNIMVDAY 328
+Y ++D Y
Sbjct: 518 VTYTAIIDGY 527
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C + L+ A A+F M K G P++V Y++ I+GL G ++A+++
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + +P+ TYT+ + A S A++L +M+ C PNI T+TAL++ +R
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
+G E A ++ ++ G+ P YNAL+ A+ + M G P +
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 321 YNIMVDAYGRAG 332
YN ++ + G
Sbjct: 415 YNEIIKCFCLMG 426
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ PT TY + L + C +G +A + +M+K G P+ + + I GL + G
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDG 356
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+ ++ +M D P+T TY +IN + A +F M SH P+ TY
Sbjct: 357 KFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-M 312
++ F G ++A IF+++ AG P+V YN L+ Y RL+ M
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCS--YSLVE 344
G +PD +Y ++ + R G E S Y ++E
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEA--VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P TY+ L+ C G E AE + + YG P+ Y + + GL G +A
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ M++ QPS E Y ++ K K AL +F M + + ++ Y AL+ A
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+E EEA+ IF+ + D A+ L++
Sbjct: 740 CKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +AE +++ +P TY + C +G A +F EM K
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKA--VEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P+ Y+S I GL + G + A + R+ C+P+ +TYT ++ + +
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +L M+ +P+ Y AL+ + E A IF + G + + Y AL+
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736
Query: 302 EA 303
A
Sbjct: 737 CA 738
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 3/137 (2%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P DTY L+K C G +A+ + M+K GL PS +Y + + G K + A+
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
IF M Q Y +I K + A +F M + +T L++
Sbjct: 715 NIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774
Query: 270 AREG---LCEEAEEIFE 283
+EG LC + + E
Sbjct: 775 LKEGETDLCLKLLHVME 791
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 38/319 (11%)
Query: 54 FVDGIFPVLSPTA--QQILRFVQRE--------------VDSNTIWDAFDSLPPTHATWD 97
V G+F ++P + +L FV+R+ + +N++ P+ +T++
Sbjct: 340 LVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFN 399
Query: 98 DLINVSVQLRLNKKWDPIVLMSCVS----------ILLIEAYGQKSLHKKAEFTYLELLD 147
+ V +L+ K V +CV + LIEA + + L++
Sbjct: 400 ITL-ACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLIN 458
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
I +Y +++ C +++A +FR++ G+ P+ V YN+ I G + GN K
Sbjct: 459 DGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDK 518
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
A E+ + + +P T+ +I+ +A K A F EM PN+ TY L+
Sbjct: 519 AQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILIC 578
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEP 316
+F G + + Q++ GI+PD +++NAL++ Y S + +G +P
Sbjct: 579 SFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQP 638
Query: 317 DRASYNIMVDAYGRAGLHE 335
D +Y ++ + ++G H+
Sbjct: 639 DNYTYGALIKSLCKSGRHD 657
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + KA+ LL+SR P T+ L+ C + E A F EM ++
Sbjct: 506 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWD 565
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+PP+ + YN I G+ ++ + ++MK QP T ++ +I Y ++ A
Sbjct: 566 VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 625
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
KLF+ M +P+ TY AL+ + + G ++A EIF ++ G PD Y
Sbjct: 626 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYT 677
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ Q H+ A + E+++ P TY +L+ ++C G + ++ + R+M+ +G
Sbjct: 541 LIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHG 600
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P +N+ I G QKA ++F M R QP TY +I K+ + A
Sbjct: 601 IQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAR 660
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFA 270
++F M+ + C P+ T + + A
Sbjct: 661 EIFLSMKENGCTPDSYTCSLFSDTLA 686
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
TE+ +L ++ GL VF ++ GL P+ +YN+ +D L+K + A F
Sbjct: 193 TEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKF 252
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
Q+M C P TY ++I+ + AL+L +M PN+ TYT L++ F
Sbjct: 253 QQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNA 312
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-YRLISRMHMGCEPDRASYNIMVDAYGRA 331
E ++ + ++ + P+ +L+ +R I+ PD+A ++ +
Sbjct: 313 KRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIA-------PDKAFELLLEFVERKQ 365
Query: 332 GLHEGKCSYSLVELS 346
G+ + C L LS
Sbjct: 366 GITQLVCDNILYCLS 380
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y ++ A S L+ A F++M + P YN I G+ + G +A+ +
Sbjct: 227 PTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRL 286
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++M+ P+ TYT++I+ + A ++ K+ M+ PN T +LV+ R
Sbjct: 287 MKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFR 346
Query: 272 EGLCEEAEEIFEQL 285
C ++ FE L
Sbjct: 347 ---CIAPDKAFELL 357
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 208 AVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN 267
+V++ Q++K + + E ++ +G+ + +++F ++ P Y A+++
Sbjct: 178 SVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMD 237
Query: 268 AFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEP 316
A + + A F+Q+ PD + YN L+ EA RL+ +M +G P
Sbjct: 238 ALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFP 297
Query: 317 DRASYNIMVDAYGRA 331
+ +Y I++D + A
Sbjct: 298 NVFTYTILIDGFFNA 312
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY +LK C SG A + R+M + + AV Y+ IDGL K G+ A +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M+ + YT +I + A + KL +M K P++ ++AL++ F +
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRAS 320
EG EAEE+ +++ GI PD Y +L++ + +L HM GC P+ +
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 321 YNIMVDAYGRAGL 333
+NI+++ Y +A L
Sbjct: 390 FNILINGYCKANL 402
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 15/248 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTED 155
WDD + + K +V S LI+ + ++ ++AE + E++ P
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSA----LIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ +C L+KA + M G P+ +N I+G K +E+F++M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
T TY +I + + K +A +LF EM S + +P+I +Y L++ G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIM 324
E+A EIFE+++ + +E D+ YN ++ +A+ L + + G +PD +YNIM
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 325 VDAYGRAG 332
+ + G
Sbjct: 534 IGGLCKKG 541
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 11/182 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y L++ +C +G + + R+M K + P V +++ ID +K G ++A E+ + M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P T TYT +I+ + K ++ A + + M S C PNI T+ L+N + + L +
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIMV 325
+ E+F ++ G+ D YN L++ + + ++ + E PD SY I++
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 326 DA 327
D
Sbjct: 465 DG 466
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L++ +C G LE A+ +F+EM + P V Y +DGL G P+KA+EIF+++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ + Y ++I+ ASK A LF + KP++ TY ++ ++G
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRAGL 333
EA+ +F +++ G P+ YN L+ R H+G E D +++ R G
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILI-------RAHLG-EGDATKSAKLIEEIKRCGF 593
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T++ L+ C+ G + +A + M + G P+ + N+ ++GL G AV +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM QP+ TY ++ + K+ ++ +A++L +M K K + Y+ +++ +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRAS 320
+G + A +F +++ G + D+ Y L+ + R G + PD +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 321 YNIMVDAYGRAG 332
++ ++D + + G
Sbjct: 320 FSALIDCFVKEG 331
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++ C G L +A+ +FR+M + G P+ YN I L G+ K+ ++
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ +KR C S + TL AL M +P++ T+T L+ F
Sbjct: 585 IEEIKR--CGFSVDASTLR-----------FALSTLARMLKAGHEPDVFTFTTLLRPFCL 631
Query: 272 E--GLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRM--------HMGCEPDR 318
E +A +F+ ++ G +P+V YN +++ +IS++ GC+P+
Sbjct: 632 EENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNA 691
Query: 319 ASYNIMVDAYGRAGLH 334
+ + + + LH
Sbjct: 692 VTKSTFISGLCKQDLH 707
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 152 PTEDTYALLLKAYCM--SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P T+ LL+ +C+ + + A +F+ M+ G P+ V YN+ I GLL G +
Sbjct: 617 PDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVP 676
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
+ +M CQP+ T + I+ K A+ L +M +
Sbjct: 677 GVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEN 719
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+ A +F+EM + P + ++ + + +++ ++M+ + T ++M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
IN + K +A ++ +P+ T++ L+N EG EA E+ +++ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 291 EPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+P + NAL+ +A LI RM G +P+ +Y ++ ++G
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y+ L+ + G +++A + EM K GL P+ +NS +D L+K +A+ FQ M
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM 732
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K C P+T TY+++IN + K A + EM+ PN+ TYT ++ A+ G
Sbjct: 733 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNI 792
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----AYRLISRMHM-------GCEPDRASYNIM 324
+A +FE+ + G PD ++NAL+E A R I H+ GC + + +
Sbjct: 793 TDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISL 852
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKHY 350
+DA +A E E +V+H+
Sbjct: 853 LDALNKAECLEQAAVVGFGENTVRHF 878
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y++L+ +G + ++F M++ G A YN+ +DG K G KA E
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + MK P+ TY +I+ K + A LF E +S + N+ Y++L++ F
Sbjct: 623 VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFG 682
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------RLI---SRMHMGCEPDRA 319
+ G +EA I E++ G+ P+VY +N+LM+A LI S M C P+
Sbjct: 683 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTY 742
Query: 320 SYNIMVDAYGR 330
+Y+I+++ R
Sbjct: 743 TYSILINGLCR 753
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +L+ A + E+A + R+M++ G ++ + + L + G + A+ +
Sbjct: 180 PAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALAL 239
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+K C +P Y + I+ +GKA MA K F+E++S KP+ +YT+++ +
Sbjct: 240 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCK 299
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G EAEE+F Q++ P YAYN ++ AY+L+ ++ GC P S
Sbjct: 300 AGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVS 359
Query: 321 YNIMVDAYGR 330
+N ++ G+
Sbjct: 360 FNSILTCLGK 369
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ G+K A + +LD+ Y L++ + M G E +F+EM + G
Sbjct: 467 LIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + N+Y+D + K G+ +K IF+ +K P +Y+++I+ KA ++
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F+ M+ + Y A+V+ F + G ++A E+ E+++ + P V Y ++++
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646
Query: 305 RLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
I R+ G E + Y+ ++D +G+ G
Sbjct: 647 AKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
T E + P TY +++ CM+G +E+A + EM GL P+ + N +D L
Sbjct: 377 LTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K + A E+F+ + C P++ TY +I+ GK A +LF M N
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE---- 315
YT+L+ F G E+ +IF+++ G +PD+ N M+ + G
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556
Query: 316 -------PDRASYNIMVDAYGRAG 332
PD SY+I++ +AG
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAG 580
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+ R PT TY ++ L++A +F E + G+ + +VY+S IDG K G
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A I + M + P+ T+ +++ KA + AL F M+ KC PN TY+
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYS 745
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------- 315
L+N R +A ++++Q G+ P+V Y ++ + + C
Sbjct: 746 ILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKAN 805
Query: 316 ---PDRASYNIMVDAYGRA 331
PD AS+N +++ A
Sbjct: 806 GGTPDAASFNALIEGMSHA 824
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 126 IEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGL 185
I+ +G+ A + EL P + +Y ++ C +G L +AE +F +M
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERA 318
Query: 186 PPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALK 245
P A YN+ I G G + A ++ ++K C PS ++ ++ GK K AL
Sbjct: 319 VPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALT 378
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME--- 302
LF M+ +PN TY +++ G EEA I ++++ AG+ P++ N +++
Sbjct: 379 LFEAMKKD-AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLC 437
Query: 303 -------AYRLI-SRMHMGCEPDRASYNIMVDAYGRAG 332
AY + + GC P+ +Y ++D G+ G
Sbjct: 438 KAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKG 475
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + + + +G ++ A F E++ GL P V Y S I L K G +A E+F +M+
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+ P Y MI YG A + A KL ++++ C P++ ++ +++ ++ +
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVD 374
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
EA +FE ++ EP+ YN ++ EAY + M H G P+ + NIMV
Sbjct: 375 EALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMV 433
Query: 326 DAYGRA 331
D +A
Sbjct: 434 DRLCKA 439
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A + +A + + + +C P TY++L+ C KA ++EM+K G
Sbjct: 712 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 771
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + I GL K GN A +F+R K + P ++ +I A+++ A
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAY 831
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
+F E R C+ N+ +L++A + E+A
Sbjct: 832 HVFEETRLKGCRINVKACISLLDALNKAECLEQA 865
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY L+ G ++ A +F M G + VVY S I G +
Sbjct: 457 CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGH 516
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+IF+ M R CQP ++ KA +F +++ + P++ +Y+ L++
Sbjct: 517 KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG-CEPDR 318
+ G E IF ++ G D AYNA+++ AY ++ M + P
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636
Query: 319 ASYNIMVDAYGR 330
A+Y ++D +
Sbjct: 637 ATYGSIIDGLAK 648
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 89 LPPTHATWDDLINVSVQL-RLNK--------KWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
+PPT AT+ +I+ ++ RL++ K I L V LI+ +G+ +A
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
E++ P T+ L+ A + + +A F+ M++ P+ Y+ I+GL
Sbjct: 692 LILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ KA +Q M++ P+ TYT MI K A LF +++ P+
Sbjct: 752 CRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDA 811
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ AL+ + EA +FE+ + G +V A +L++A
Sbjct: 812 ASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDA 855
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 166 MSGLLEKAEAVFREMR--KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+S L E V EM YG+P A + L++ A + M+R +P+
Sbjct: 124 LSHDLAAMEKVLEEMSVLGYGVPNPACA--DLVSALVRTRRLDDAERVIAAMRRLKFRPA 181
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
YT++I +A + AL+L +M+ + + +T LV A AREG E A + +
Sbjct: 182 FSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVD 241
Query: 284 QLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAG 332
+++G+ +EPD+ YN ++ + + M G +PD SY M+ +AG
Sbjct: 242 EVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAG 301
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 12/189 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP T L+L A C +GL+ +A FR+M G P+ + + S IDGL K G+ ++A E
Sbjct: 272 IPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 331
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAF 269
+ + M R+ +P+ T+T +I+ K + A +LF ++ RS KPN+ TYT+++ +
Sbjct: 332 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGY 391
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
+E AE +F +++ G+ P+V Y L+ AY L++ M G P+
Sbjct: 392 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNI 451
Query: 319 ASYNIMVDA 327
+YN ++D+
Sbjct: 452 YTYNAVIDS 460
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 112 WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLL 170
W P V LI+ ++ +KA +L+L+ S P TY ++ YC L
Sbjct: 341 WKPNVYTHTA---LIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKL 397
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+AE +F M++ GL P+ Y + I+G K GN +A E+ M + +P+ TY +
Sbjct: 398 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAV 457
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ K S++ A +L N+ S + + TYT L+ ++ ++A F ++ G
Sbjct: 458 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGF 517
Query: 291 EPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
E D+ N L+ A+ +M +G P + +Y M+ Y + G
Sbjct: 518 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEG 570
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L++ C +++A A F M K G + N I + +++ +FQ +
Sbjct: 488 TYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 547
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ ETYT MI+ Y K +ALK F+ M+ H C P+ TY +L++ ++ +
Sbjct: 548 VSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 607
Query: 276 EEAEEIFEQLQGAGIEP 292
+EA +++E + G+ P
Sbjct: 608 DEACKLYEAMIDRGLSP 624
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T +L+ SGL++ AE VF EM G+ P + + + G + G Q+A
Sbjct: 203 PSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRW 262
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M + P T TL+++ + A+ F +M KPN+ +T+L++ +
Sbjct: 263 LSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 322
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMG--CEPDRA 319
+G ++A E+ E++ G +P+VY + AL++ A+RL ++ +P+
Sbjct: 323 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVH 382
Query: 320 SYNIMVDAY 328
+Y M+ Y
Sbjct: 383 TYTSMIGGY 391
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 39/237 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y ++ +AE + + + P +TY L+ +C +G ++A + M G
Sbjct: 387 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEG 446
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ ID L K +A E+ + + TYT++I K S AL
Sbjct: 447 FRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQAL 506
Query: 245 KLFNEM--------------------RSHKCK---------------PNICTYTALVNAF 269
F M R K K P TYT++++ +
Sbjct: 507 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGY 566
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
+EG + A + F ++ G PD + Y +L+ S + C+ Y M+D
Sbjct: 567 CKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL----YEAMID 619
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%)
Query: 159 LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD 218
+L+ A+C ++++E +F+ + GL P+ Y S I G K G+ A++ F MKR
Sbjct: 526 ILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRH 585
Query: 219 CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
C P + TY +I+ K S A KL+ M P T L + + A
Sbjct: 586 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASA 645
Query: 279 EEIFEQL 285
+ E L
Sbjct: 646 MIVLEPL 652
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI A+ ++ K++E + ++ +PT++TY ++ YC G + A F M+++
Sbjct: 526 ILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRH 585
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + Y S I GL K +A ++++ M P T + Y K + S A
Sbjct: 586 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASA 645
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ + + K I T LV E A F++L +E D A + A
Sbjct: 646 MIVLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKL----LEKDSSADRVTLAA 698
Query: 304 Y 304
+
Sbjct: 699 F 699
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
D L+ GN QKA E+ + M R+ + + + A+ + +M++
Sbjct: 158 DSLIANGNLQKAHEVMRCMLRN---------------FSEIGRLNEAVGMVMDMQNQGLS 202
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P+ T ++ GL + AE +F+++ G+ PD ++ ++ EA R
Sbjct: 203 PSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRW 262
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGL 333
+S M G PD A+ +++ A GL
Sbjct: 263 LSGMIQRGFIPDNATCTLILSALCENGL 290
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+ L PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFKY 333
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W SL P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A K M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A + +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ + P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +PT TY L+ C+ G E A +F+ M +G PS YN I
Sbjct: 365 YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCL 424
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ QKA+ IF +M + P+ TY +I Y K A++L M+ + KP+ T
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------M 310
YT L++ F+R G E A +F + GI P+ Y A+++ Y +++ +
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544
Query: 311 HMGCEPDRASYNIMVDAYGRA 331
G P +YN+M+ + +
Sbjct: 545 ESGNLPSSQTYNVMISGFSKT 565
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ + G LE A ++F M ++G+ P+ V Y + IDG A+ +
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M PS++TY +MI+ + K + A +M PN+ TYT+ ++ R
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM------------EAYRLISRM-HMGCEPDR 318
G A +IF +++ P++Y Y++L+ E Y L++R+ H GCEP+
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV 659
Query: 319 ASYNIMVDAYGRAGLHEGKC 338
+Y +V G G EG+C
Sbjct: 660 DTYTTLVK--GLCG--EGRC 675
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P TY+ L+ C G LE+A + EM + G+ P+ Y + L G +AV
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ +MK+ C P+ +T+T +I+ + K +A+ L+++M + P TY AL+N
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDR 318
EG E A IF+ + G P YN +++ + L+ + G P+
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447
Query: 319 ASYNIMVDAYGRAG 332
+YN ++ Y + G
Sbjct: 448 ITYNTLIYGYCKQG 461
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C+P T+ L+ G E A ++ +M GL P+ V YN+ I+ L G + A
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
IF+ M PST+TY +I + A+ +F++M PN+ TY L+ +
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDR 318
++G A + E ++G G++PD + Y L+ + M G P+
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 319 ASYNIMVDAY 328
+Y ++D Y
Sbjct: 518 VTYTAIIDGY 527
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ +C + L+ A A+F M K G P++V Y++ I+GL G ++A+++
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + +P+ TYT+ + A S A++L +M+ C PNI T+TAL++ +R
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
+G E A ++ ++ G+ P YNAL+ A+ + M G P +
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 321 YNIMVDAYGRAG 332
YN ++ + G
Sbjct: 415 YNEIIKCFCLMG 426
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ PT TY + L + C +G +A + +M+K G P+ + + I GL + G
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDG 356
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ A+ ++ +M D P+T TY +IN + A +F M SH P+ TY
Sbjct: 357 KFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH-M 312
++ F G ++A IF+++ AG P+V YN L+ Y RL+ M
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCS--YSLVE 344
G +PD +Y ++ + R G E S Y ++E
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEA--VFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
P TY+ L+ C G E AE + + YG P+ Y + + GL G +A
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ M++ QPS E Y ++ K K AL +F M + + ++ Y AL+ A
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+E EEA+ IF+ + D + L++
Sbjct: 740 CKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I + + + +AE +++ +P TY + C +G A +F EM K
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKA--VEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
P+ Y+S I GL + G + A + R+ C+P+ +TYT ++ + +
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A +L M+ +P+ Y AL+ + E A IF + G + + Y AL+
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736
Query: 302 EA 303
A
Sbjct: 737 CA 738
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 3/137 (2%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P DTY L+K C G +A+ + M+K GL PS +Y + + G K + A+
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
IF M Q Y +I K + A +F M + +T L++
Sbjct: 715 NIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774
Query: 270 AREG---LCEEAEEIFE 283
+EG LC + + E
Sbjct: 775 LKEGETDLCLKLLHVME 791
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+E+ Y LL C + +E A +F M G Y + I L K ++A I
Sbjct: 692 PSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCI 751
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ M +T++++ K ++ + LKL + M S C N TY L +
Sbjct: 752 FQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSA 811
Query: 272 EGLCEEAEEIFEQLQGAGIEPD 293
+ +I +QL GI D
Sbjct: 812 LDCAIKIPQISQQL---GIVKD 830
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++ A ++ K A +LE DS + + ++ +L+ YC + +L+ A EM K+
Sbjct: 174 MVMHALAKQGGAKDAYSVFLEFKDSITLDSH-SFNILIHGYCEARMLDDARKTMEEMEKH 232
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P A Y +I K + + I M C+P Y++ I GKA K A
Sbjct: 233 GFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEA 292
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L+++ +M + CKP+ ++ L+ R G +A +FE ++ G+ D++ YNA++
Sbjct: 293 LEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAMIYH 352
Query: 302 --------EAYRLISRMHMG-CEPDRASY 321
A +L+ RM + C+PD +Y
Sbjct: 353 ACANRQGNSALKLLERMEVNSCKPDLETY 381
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 11/239 (4%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
D I L S +LI Y + + A T E+ P +Y +KAYC
Sbjct: 197 DSITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRN 256
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
E + EM + G P + Y+ YI L K +A+E++++M ++ C+P + ++ +I
Sbjct: 257 VEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIY 316
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ G++ + A +F +M +H ++ TY A++ A ++ E+++ +P
Sbjct: 317 VLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKP 376
Query: 293 DVYAYNALME-----------AYRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
D+ Y L++ + L + D ++Y +++ +G E C +
Sbjct: 377 DLETYQPLLKMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACFF 435
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +++++ SG+ + V R + KY + V N + L K G + A +F
Sbjct: 136 TMSIVVRRLASSGMYKDVIDVLRGLEKYRVKKDTVALNMVMHALAKQGGAKDAYSVFLEF 195
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K D + ++ ++I+ Y +A A K EM H +P+ +YT + A+ ++
Sbjct: 196 K-DSITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDF 254
Query: 276 EEAEEIFEQLQGAGIEPDVYAYN----------ALMEAYRLISRMHMG-CEPDRASYNIM 324
E I ++ G EPDV AY+ + EA + +M+ C+PD ++ +
Sbjct: 255 RNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTL 314
Query: 325 VDAYGRAG 332
+ GR+G
Sbjct: 315 IYVLGRSG 322
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+ I A G+ +A Y ++ + C P ++ L+ SG L A VF +M +
Sbjct: 278 IYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMENH 337
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ YN+ I A+++ +RM+ + C+P ETY ++ + K K
Sbjct: 338 GVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKPDLETYQPLLKMCCKM-KDMKV 396
Query: 244 LK-LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
LK L + M ++ + ++ TY L+ A G E A F+ GI P Y L++
Sbjct: 397 LKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACFFFQDAVLNGIVPKDRTYEILLK 456
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
Y L++++ GK K + K+ NEM + + T + +V A G+ ++ ++ L+
Sbjct: 102 YDLVVDILGKCKKFGIMWKVVNEMNELNGQVSFSTMSIVVRRLASSGMYKDVIDVLRGLE 161
Query: 287 GAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASYNIMVDAYGRA 331
++ D A N +M +AY + D S+NI++ Y A
Sbjct: 162 KYRVKKDTVALNMVMHALAKQGGAKDAYSVFLEFKDSITLDSHSFNILIHGYCEA 216
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 89 LPPTHATWDDLIN-----------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
L P H ++ +IN ++Q ++ + +++C +++ + + K+
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVM--DGLFKVGKTKE 444
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + +L P TY+ LL YC G +E AE V ++M K +PP+ + ++S I+
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G KAV++ + M + P+T Y ++I+ Y KA + +A EM+S + +
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + L+N R G +EA + + GI+PD+ Y +L++ Y
Sbjct: 565 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ YC+ G E A + EM+ YG+ P+AV YN I GL K G +KA M
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM 731
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T+ ++ Y ++ K+ L++ ++ + + ++ Y L+ F R G+
Sbjct: 732 LVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMT 791
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRASYNIM 324
+A+ + +++ GI D+ YNAL+ Y + S+M + G P+ +YN +
Sbjct: 792 RKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTL 851
Query: 325 VDAYGRAGL 333
+ AGL
Sbjct: 852 LGGLSNAGL 860
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + +++ Y +++ + +P T + +L +C G L +A +FREM + G
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG 386
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + I+ L K G +A + +M T T +++ K K+ A
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE 446
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F + PN TY+AL++ + + G E AE + ++++ + P+V +++++ Y
Sbjct: 447 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 506
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDAYGRAG 332
L + P+ Y I++D Y +AG
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P TY +L+ C +G +EKAE+ EM P+ + + + + K ++
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I +++ + S Y +I ++ + + A + +EM ++ TY AL+ +
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 821
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------------EAYRLISRMH-MGCE 315
E+A + + Q+ GI P++ YN L+ E +L+S M+ G
Sbjct: 822 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 881
Query: 316 PDRASYNIMVDAYGRAG 332
P+ A+Y+I+V YGR G
Sbjct: 882 PNAATYDILVSGYGRVG 898
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY L+ AYC +E++ +++++M G+ P V +S + G + G +A +
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P+ +Y +IN K+ + A L ++M +I T T +++ +
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G +EAEE+FE + + P+ Y+AL++ Y + +M + P+ +
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498
Query: 321 YNIMVDAYGRAGL 333
++ +++ Y + G+
Sbjct: 499 FSSIINGYAKKGM 511
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G ++AE VF + K L P+ V Y++ +DG K G + A + Q+M+++ P+ T+
Sbjct: 440 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 499
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+ +IN Y K A+ + EM PN Y L++ + + G + A++ ++++
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 559
Query: 288 AGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+E ++ L+ + + RM G +PD +Y ++D Y + G
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 615
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + +KAE E+L +PT T+ L+KAY S +K + ++
Sbjct: 710 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 769
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL S VYN+ I + G +KA + M + TY +I Y S A
Sbjct: 770 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 829
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGL----CEEAEEIFEQLQGAGIEPDVYAYNA 299
LK +++M PNI TY L+ + GL EE E++ ++ G+ P+ Y+
Sbjct: 830 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 889
Query: 300 LMEAY--------RLISRMHM---GCEPDRASYNIMVDAYGRAG 332
L+ Y +I + M G P +YN+++ Y ++G
Sbjct: 890 LVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSG 933
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + + +KA+ E++ TY L++ YC +EKA + +M G
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 840
Query: 185 LPPSAVVYNSYIDGLLKGG----NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ P+ YN+ + GL G ++ ++ M P+ TY ++++ YG+
Sbjct: 841 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 900
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ L EM + P + TY L++ +A+ G EA E+ L G P+ + Y+ L
Sbjct: 901 KKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960
Query: 301 MEAYRLISRMHMGCEP--DRA---SYNIMVDAY----GRAGLHEGK 337
+ +++ EP DR+ SY I V GR GL K
Sbjct: 961 TCGW-----LNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLKFSK 1001
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +L+K YC GL++ AE V + G+ + N+ IDG + G +A E+ +
Sbjct: 199 TCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENS 258
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS-------------------HKCK 256
R + TY ++ + K A LFNE+ +
Sbjct: 259 WRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQ 318
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA----------YNALMEAYRL 306
P + TYT L+ A+ + EE+ +++++ GI PDV + L EA L
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
M+ MG +P+ SY ++++ ++G
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSG 405
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M + GL P + YN+ I+ G + A++I MK P+ TY ++I K
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A +EM + P T+ LV A++R ++ +I E+L +G+E + YN
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 780
Query: 300 LMEAY-RL-ISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
L+ + RL ++R + I D L G C+ S VE ++K Y
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTY 833
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKY-------------------GLPPSAVVYNSYI 196
TY LLKA+C +G L +AE++F E+ + L P+ V Y + I
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLI 328
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K +++ ++++M + P T + ++ + + K A LF EM
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLD 388
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EA 303
PN +Y ++N+ + G EA + Q+ GI D+ +M E
Sbjct: 389 PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV 448
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ I ++++ P+ +Y+ ++D Y + G E
Sbjct: 449 FETILKLNLA--PNCVTYSALLDGYCKLGKME 478
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 83/221 (37%), Gaps = 17/221 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y A T+ + +PT + LL + SGL+ + + ++ +M G
Sbjct: 65 LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-- 242
+ P N + L K G+ A+ + D TY +I +G K +
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVI--WGFCQKGLVDQ 180
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L +EM + T LV + R GL + AE + L G+ DV N L++
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLID 240
Query: 303 AYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
Y M E D +YN ++ A+ + G
Sbjct: 241 GYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTG 281
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ KK ++E++ +PT TY +L+ Y SG + +A + ++
Sbjct: 889 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 948
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
G P++ Y+ G L N EI + +KR
Sbjct: 949 GRIPNSFTYDILTCGWL---NLSYEPEIDRSLKR 979
>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 350
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ +C +G ++K+ V + G A Y++ I+GL K N +AV + M
Sbjct: 70 TYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGM 129
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ C+P+ Y +IN ASK A+++F EM + C P I TY L+N F + +
Sbjct: 130 IKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMF 189
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIM 324
EA + ++L G++P V Y+ LME A +L +++ G +PD +NI+
Sbjct: 190 GEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNIL 249
Query: 325 VDAYGRAGLHEGKCSYSLVELSVKHY 350
+ G CS ++L++ Y
Sbjct: 250 I---------HGLCSVGKMQLALSLY 266
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 89/179 (49%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI S + A + E+ C PT TY L+ +C + + +A + +E+ G
Sbjct: 144 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKG 203
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y+ ++GL ++A++++ ++ +P + + ++I+ K +AL
Sbjct: 204 LDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 263
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+ +M KC PN+ ++ L+ F ++G A I+ ++ G+EPD+ +YN +E
Sbjct: 264 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEG 322
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F E++ S + ++ +++ +G +++ +++ M++ G ++ Y + G
Sbjct: 19 FELWEMMGSEGNRSVSSFNTMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 78
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G K++ + + ++ Y+ MIN K + A+ + N M CKPN+
Sbjct: 79 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 138
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
Y L+N E+A +F ++ P + YN L+ EAY L+
Sbjct: 139 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKE 198
Query: 310 -MHMGCEPDRASYNIMVDA 327
+ G +P +Y+++++
Sbjct: 199 LLDKGLDPGVITYSMLMEG 217
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 46/227 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +Y +L++ C G L+ A +V +M ++G P+A Y++ IDG K G+ A+ I
Sbjct: 337 PSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISI 396
Query: 212 FQRMKRDCCQPSTETYTLMINLYGK-----ASKSFM------------------------ 242
+ M R C+P+ YT M+ ++ K ++S +
Sbjct: 397 WNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCN 456
Query: 243 ------ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
AL +F+EMR H C PN TY L++ REG C +A ++ ++Q GIE +
Sbjct: 457 CRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVT 516
Query: 297 YNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
YN ++ EA + RM + G +PD ++ ++ AY + G
Sbjct: 517 YNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEG 563
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+ A Q A E+ C P + TY ++ A C G +++A V
Sbjct: 174 LLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS----- 228
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PP A YN+ I L + Q+ + M QP+ TYT ++N + KA + MA
Sbjct: 229 AAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMA 288
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME- 302
+ M C PN+ T+TALV +G +A ++++ + G P +YN L+
Sbjct: 289 CAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRG 348
Query: 303 ---------AYRLISRMHM-GCEPDRASYNIMVDAYGRAGLHEGKCS 339
A +++ M GC P+ +Y+ ++D + +AG +G S
Sbjct: 349 LCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAIS 395
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A+ + + A ++ + C P T+ L+ G + A +++ M G
Sbjct: 275 IVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEG 334
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS V YN I GL G+ + A + M++ C P+ TY+ +I+ + KA A+
Sbjct: 335 WAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAI 394
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++N+M CKPN+ YT +V F ++ + +AE + +++ P+ +N L+ +
Sbjct: 395 SIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSL 454
Query: 305 -------RLISRMH----MGCEPDRASYNIMVDAYGRAGLHEGKCSYSL 342
R + H GC P+ +YN ++ R EG C +L
Sbjct: 455 CNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFR----EGNCGDAL 499
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ + +K + +AE ++L C P T+ L+++ C + +A VF EMR++G
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ YN + GL + GN A+++ M+ + S TY +++ + A+
Sbjct: 475 CPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAM 534
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
M +P+ T+TA+++A+ +EG A I + ++ Y LM
Sbjct: 535 FFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAEL 594
Query: 302 --------EAYRLISRMHMGCEPDRASYNIMV 325
L+ ++ G P+ ++N++V
Sbjct: 595 CNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLV 626
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 143 LELLDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVF-REMRKYGL--PPSAVVYNSYIDG 198
L+ + R +P TE + A+ +G ++A F R + G P + +YN ID
Sbjct: 84 LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDA 143
Query: 199 LLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPN 258
LL+ + M++D QP+ TY L++ + + A K+ +EM + C P+
Sbjct: 144 LLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPD 203
Query: 259 ICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLIS 308
TY +V+A G +EA E+ + P +YNA++ E + ++
Sbjct: 204 DVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVG 258
Query: 309 RM-HMGCEPDRASYNIMVDAYGRAGLHEGKCS 339
M G +P+ +Y +V+A+ +AG C+
Sbjct: 259 DMVGRGLQPNVITYTTIVNAFCKAGELRMACA 290
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ ++ KA TY E+L+ +P TY ++ A C + ++KA V M K G
Sbjct: 212 IIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNG 271
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YNS + G G ++A+ I ++M D +P TYT +++ K + A
Sbjct: 272 VMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEAR 331
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+ + M KPN+ TY+ L++ +A +G E ++ + + GI+PD + ++ L+
Sbjct: 332 KILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICAC 391
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A + S+M PD +Y ++D ++G
Sbjct: 392 TKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSG 430
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y+ ++ G +KA + + EM + G+ P V YN+ + L K KA+
Sbjct: 202 CPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAM 261
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
++ RM ++ P TY +++ Y + +S A+ + +M S +P+ TYT+L++
Sbjct: 262 DVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYL 321
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR----------LISRM-HMGCEPDR 318
+ G C EA +I + + G++P+V Y+ L+ Y L+ M G +PDR
Sbjct: 322 CKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDR 381
Query: 319 ASYNIMVDA 327
++I++ A
Sbjct: 382 HVFSILICA 390
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D PT TY +L+ C +G L+ A + K G +++ + L
Sbjct: 91 DGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTS 150
Query: 207 KAVEI-FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH--KCKPNICTYT 263
A+ I +RM C P +Y +++ S+S AL+L + M C P++ +Y+
Sbjct: 151 NAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYS 210
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN----------ALMEAYRLISRM-HM 312
+++ +EG ++A + ++ GI PDV YN A+ +A +++RM
Sbjct: 211 TIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN 270
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G PD +YN +V Y +G
Sbjct: 271 GVMPDCITYNSIVHGYCSSG 290
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 108 LNKKWDPIVLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCM 166
LN+ V+ C++ ++ Y K+A ++ P TY L+ C
Sbjct: 264 LNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCK 323
Query: 167 SGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET 226
+G +A + M K GL P+ + Y++ + G G + ++ M R+ QP
Sbjct: 324 NGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHV 383
Query: 227 YTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
++++I K +A+ +F++MR + P++ TY L++ + G ++A
Sbjct: 384 FSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 89 LPPTHATWDDLIN-----------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKK 137
L P H ++ +IN ++Q ++ + +++C +++ + + K+
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVM--DGLFKVGKTKE 444
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + +L P TY+ LL YC G +E AE V ++M K +PP+ + ++S I+
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
G K G KAV++ + M + P+T Y ++I+ Y KA + +A EM+S + +
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ + L+N R G +EA + + GI+PD+ Y +L++ Y
Sbjct: 565 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 28/199 (14%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG---NPQKAVEIF 212
TY ++ YC+ G E A + EM+ YG+ P+AV YN I GL K G P +
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLV 731
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALK----LFNEMRSHKCKPNICTYTALVNA 268
+ R +E ++ ++ K S + LK + +EM ++ TY AL+
Sbjct: 732 KAYSR------SEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRG 785
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------------EAYRLISRMH-MG 313
+ E+A + + Q+ GI P++ YN L+ E +L+S M+ G
Sbjct: 786 YCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERG 845
Query: 314 CEPDRASYNIMVDAYGRAG 332
P+ A+Y+I+V YGR G
Sbjct: 846 LVPNAATYDILVSGYGRVG 864
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AY + +++ Y +++ + +P T + +L +C G L +A +FREM + G
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG 386
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V Y + I+ L K G +A + +M T T +++ K K+ A
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE 446
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++F + PN TY+AL++ + + G E AE + ++++ + P+V +++++ Y
Sbjct: 447 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 506
Query: 305 R-----------LISRMHMGCEPDRASYNIMVDAYGRAG 332
L + P+ Y I++D Y +AG
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT TY L+ AYC +E++ +++++M G+ P V +S + G + G +A +
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M P+ +Y +IN K+ + A L ++M +I T T +++ +
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-----------CEPDRAS 320
G +EAEE+FE + + P+ Y+AL++ Y + +M + P+ +
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498
Query: 321 YNIMVDAYGRAGL 333
++ +++ Y + G+
Sbjct: 499 FSSIINGYAKKGM 511
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G ++AE VF + K L P+ V Y++ +DG K G + A + Q+M+++ P+ T+
Sbjct: 440 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 499
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+ +IN Y K A+ + EM PN Y L++ + + G + A++ ++++
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 559
Query: 288 AGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
+E ++ L+ + + RM G +PD +Y ++D Y + G
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 615
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 127/337 (37%), Gaps = 90/337 (26%)
Query: 87 DSLPPTHATWDDLIN-VSVQLRLNKKWDPIVLM--------SCVSILLIEAYGQKSLHKK 137
+ +PP T+ +IN + + L+K D + M + V +LI+ Y +
Sbjct: 490 EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDV 549
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
A+ E+ R + + +LL G +++A ++ +M G+ P V Y S ID
Sbjct: 550 ADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLID 609
Query: 198 GLLKGGNPQKAVEIFQRMK--------------------------RDCCQ--------PS 223
G K GN A+ I Q MK R C P
Sbjct: 610 GYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPD 669
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC-------- 275
TY +IN Y K+ AL + NEM+S+ PN TY L+ + G
Sbjct: 670 CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKF 729
Query: 276 --------EEAEEIF---EQLQGAGIE-----------------PDVYAYNALMEAY--- 304
E+A++I E+L +G+E D+ YNAL+ Y
Sbjct: 730 LVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTG 789
Query: 305 -------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
+ S+M + G P+ +YN ++ AGL
Sbjct: 790 SHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGL 826
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG----NPQKAVEI 211
TY L++ YC +EKA + +M G+ P+ YN+ + GL G ++ ++
Sbjct: 778 TYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKL 837
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P+ TY ++++ YG+ + L EM + P + TY L++ +A+
Sbjct: 838 VSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAK 897
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEP--DRA---SYNIMVD 326
G EA E+ L G P+ + Y+ L + +++ EP DR+ SY I V
Sbjct: 898 SGKMIEARELLNDLLTKGRIPNSFTYDILTCGW-----LNLSYEPEIDRSLKRSYEIEVK 952
Query: 327 AY----GRAGLHEGK 337
GR GL K
Sbjct: 953 KLLIEMGRKGLKFSK 967
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +L+K YC GL++ AE V + G+ + N+ IDG + +A E+ +
Sbjct: 199 TCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENS 258
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-------------------RSHKCK 256
R + TY ++ + K A LFNE+ +
Sbjct: 259 WRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQ 318
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA----------YNALMEAYRL 306
P + TYT L+ A+ + EE+ +++++ GI PDV + L EA L
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
M+ MG +P+ SY ++++ ++G
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSG 405
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 25/189 (13%)
Query: 141 TYLELLDSRC----IPTEDTYALLLKAY----------------CMSGL-LEKAEAVFRE 179
TY L+ C +PT T+ L+KAY SGL L++ + V E
Sbjct: 707 TYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDE 766
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS- 238
M K G+ V YN+ I G G + +KA++ + +M D P+ TY ++ A
Sbjct: 767 MVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGL 826
Query: 239 ---KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
KL +EM PN TY LV+ + R G ++ + ++ G P +
Sbjct: 827 MEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLK 886
Query: 296 AYNALMEAY 304
YN L+ Y
Sbjct: 887 TYNVLISDY 895
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKY-------------------GLPPSAVVYNSYI 196
TY LLKA+C +G L +AE++F E+ + L P+ V Y + I
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLI 328
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K +++ ++++M + P T + ++ + + K A LF EM
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLD 388
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-------------EA 303
PN +Y ++N+ + G EA + Q+ GI D+ +M E
Sbjct: 389 PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV 448
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
+ I ++++ P+ +Y+ ++D Y + G E
Sbjct: 449 FETILKLNLA--PNCVTYSALLDGYCKLGKME 478
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEA----VFREM 180
LI Y S +KA TY ++ P TY LL +GL+E+ + EM
Sbjct: 782 LIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEM 841
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
+ GL P+A Y+ + G + GN +K + + M P+ +TY ++I+ Y K+ K
Sbjct: 842 NERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKM 901
Query: 241 FMALKLFNEMRSHKCKPNICTYTAL 265
A +L N++ + PN TY L
Sbjct: 902 IEARELLNDLLTKGRIPNSFTYDIL 926
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 83/221 (37%), Gaps = 17/221 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y A T+ + +PT + LL + SGL+ + + ++ +M G
Sbjct: 65 LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM-- 242
+ P N + L K G+ A+ + D TY +I +G K +
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVI--WGFCQKGLVDQ 180
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L +EM + T LV + R GL + AE + L G+ DV N L++
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLID 240
Query: 303 AYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
Y M E D +YN ++ A+ + G
Sbjct: 241 GYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTG 281
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ YG+ KK ++E++ +PT TY +L+ Y SG + +A + ++
Sbjct: 855 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 914
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
G P++ Y+ G L N EI + +KR
Sbjct: 915 GRIPNSFTYDILTCGWL---NLSYEPEIDRSLKR 945
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 12/189 (6%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
IP T L+L A C +GL+ +A FR+M G P+ + + S IDGL K G+ ++A E
Sbjct: 850 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 909
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTYTALVNAF 269
+ + M R+ +P+ T+T +I+ K + A +LF ++ RS KPN+ TYT+++ +
Sbjct: 910 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 969
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
+E AE +F +++ G+ P+V Y L+ AY L++ M G P+
Sbjct: 970 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 1029
Query: 319 ASYNIMVDA 327
+YN +D+
Sbjct: 1030 YTYNAAIDS 1038
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 15/233 (6%)
Query: 112 WDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLL 170
W P V LI+ ++ +KA +L+L+ S P TY ++ YC L
Sbjct: 919 WKPNVYTHTA---LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKL 975
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
+AE +F M++ GL P+ Y + I+G K G+ +A E+ M + P+ TY
Sbjct: 976 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 1035
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
I+ K S++ A +L N+ S + + TYT L+ ++ +A F ++ G
Sbjct: 1036 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 1095
Query: 291 EPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
E D+ N L+ A+ +M +G P + +Y M+ Y + G
Sbjct: 1096 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 1148
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L++ C + +A A F M K G + N I + +++ +FQ +
Sbjct: 1066 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 1125
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ ETYT MI+ Y K +ALK F+ M+ H C P+ TY +L++ ++ +
Sbjct: 1126 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 1185
Query: 276 EEAEEIFEQLQGAGIEP 292
+EA +++E + G+ P
Sbjct: 1186 DEACKLYEAMIDRGLSP 1202
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 90/237 (37%), Gaps = 39/237 (16%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y ++ +AE + + + P +TY L+ +C +G +A + M G
Sbjct: 965 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 1024
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YN+ ID L K +A E+ + + TYT++I K + AL
Sbjct: 1025 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 1084
Query: 245 KLFNEM--------------------RSHKCK---------------PNICTYTALVNAF 269
F M R K K P TYT++++ +
Sbjct: 1085 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 1144
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVD 326
+EG + A + F ++ G PD + Y +L+ S + C+ Y M+D
Sbjct: 1145 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL----YEAMID 1197
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI A+ ++ K++E + ++ IPT++TY ++ YC G ++ A F M+++
Sbjct: 1104 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 1163
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + Y S I GL K +A ++++ M P T + Y K + S A
Sbjct: 1164 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 1223
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ L + K I T LV E A F++L +E D A + A
Sbjct: 1224 MILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKL----LEKDSSADRVTLAA 1276
Query: 304 Y 304
+
Sbjct: 1277 F 1277
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
D LL GN QKA E+ + M R+ + + + A+ + +M++
Sbjct: 736 DSLLANGNLQKAHEVMRCMLRN---------------FSEIGRLNEAVGMVMDMQNQGLT 780
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P+ T ++ GL E AE +F+++ G+ PD +Y ++ EA R
Sbjct: 781 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 840
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAGL 333
++ M G PD A+ +++ A GL
Sbjct: 841 LTGMIQRGFIPDNATCTLILTALCENGL 868
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 104/200 (52%), Gaps = 11/200 (5%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
++ + L + P Y L+ +C +G + +AE+VFREM+ G+ P+ Y+ ID L
Sbjct: 239 SFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALC 298
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
+ G +A ++F M C P++ T+ +I ++ +A ++ L+++N+M+ +C ++
Sbjct: 299 RSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLI 358
Query: 261 TYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM 310
TY L+ ++ EA ++ + P+ ++N + A+R+ +RM
Sbjct: 359 TYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARM 418
Query: 311 -HMGCEPDRASYNIMVDAYG 329
+GC+P+ +YNI++ +
Sbjct: 419 KEVGCKPNTVTYNILMRMFA 438
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 3/197 (1%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
L K++P V+ V L+ + + +AE + E+ + P TY++++ A C S
Sbjct: 244 LKHKFEPDVI---VYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G + +A VF EM G P++V +N+ I L+ G +K ++++ +MKR C TY
Sbjct: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I + K A+K+ N M + C PN ++ + A+ A +F +++
Sbjct: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKE 420
Query: 288 AGIEPDVYAYNALMEAY 304
G +P+ YN LM +
Sbjct: 421 VGCKPNTVTYNILMRMF 437
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M+ + + V ++ + ++ G +AV F RM+ C ++ +I++ K +
Sbjct: 174 MKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRR 233
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
+ A F+ ++ HK +P++ YT+LV+ + R G EAE +F +++ AGI P+VY Y+
Sbjct: 234 AVEAQSFFDNLK-HKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSI 292
Query: 300 LMEAY---RLISRMH--------MGCEPDRASYNIMVDAYGRAGLHE 335
+++A I+R H GC P+ ++N ++ + RAG E
Sbjct: 293 VIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTE 339
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+A + +A + E+LD+ C P T+ L++ + +G EK V+ +M++
Sbjct: 292 IVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRL 351
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
+ YN I+ K N +A+++ M ++ C P+ ++ + K+ A
Sbjct: 352 RCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGA 411
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F M+ CKPN TY L+ FA + ++ +++ +EP+ Y L+
Sbjct: 412 HRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIAL 471
Query: 304 Y 304
Y
Sbjct: 472 Y 472
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 143 LELLDSRCIP-TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
++L+ +R + T T+++L++ Y +GL +A F M YG + +++ I L K
Sbjct: 171 IDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCK 230
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
+A F +K +P YT +++ + +A A +F EM+ PN+ T
Sbjct: 231 KRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYT 289
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH---------- 311
Y+ +++A R G A ++F ++ AG P+ +N L+ + R
Sbjct: 290 YSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMK 349
Query: 312 -MGCEPDRASYNIMVDAY 328
+ C D +YN +++ +
Sbjct: 350 RLRCAADLITYNFLIETH 367
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + +K Y ++ RC TY L++ +C L +A V M K
Sbjct: 328 LIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKND 387
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+A +N + K + A +F RMK C+P+T TY +++ ++ + M
Sbjct: 388 CTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIF 447
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF-EQLQGAGIEPDVYAYNALMEA 303
KL EM + +PN TY L+ + G A F E + I+P + Y ++E
Sbjct: 448 KLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEE 507
Query: 304 YR 305
R
Sbjct: 508 LR 509
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ K TY E+LD R P TY ++ A C + ++KA V M K G
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YNS + G G P++A+ ++M+ D +P TY +++ K + A
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
K+F+ M KP I TY L+ +A +G E + + + GI P+ Y ++ L+
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
EA + S+M G P+ +Y ++ ++G E Y
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y+ ++ + G L+K + + EM + P+ V YNS I L K KA+
Sbjct: 84 CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAM 143
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M + P TY +++ + + + A+ +MRS +P++ TY +L++
Sbjct: 144 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 203
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA +IF+ + G++P++ Y L++ Y + MH G P+
Sbjct: 204 CKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 263
Query: 319 ASYNIMVDAYGR 330
++I+V AY +
Sbjct: 264 YVFSILVCAYAK 275
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ AY ++ ++A + ++ P TY ++ C SG +E A F +M
Sbjct: 268 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
GL P +VYNS I GL ++A E I + + R C +T + +I+ + K +
Sbjct: 328 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIE 386
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I TY+ L++ + G +EA ++ + G++PD Y+ L+
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y ISRM G PD +YNI++
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIIL 480
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY +E+A VF +MR+ GL P+AV Y + I L K G + A+
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + P Y +I+ +K A +L EM N + +++++ +
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG E+E++F+ + G++PD+ Y+ L++ Y L +M +G +PD +
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 321 YNIMVDAY 328
Y+ +++ Y
Sbjct: 441 YSTLINGY 448
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ A + +++D P Y L+ C E+AE + EM G+ + + +NS
Sbjct: 315 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 374
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID K G ++ ++F M R +P TY+ +I+ Y A K A KL M S
Sbjct: 375 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KP+ TY+ L+N + + ++A +F +++ +G+ PD+ YN +++
Sbjct: 435 KPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQG 482
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE LE+LD + ++ ++C G + ++E +F M + G+ P + Y++
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
IDG G +A ++ M +P TY+ +IN Y K S+ AL LF EM S
Sbjct: 410 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGV 469
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P+I TY ++ + A+E++ + +G + ++ YN ++ +A R
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ + M + + ++NIM+DA + G
Sbjct: 530 MFQNLCLMDLKLEARTFNIMIDALLKVG 557
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYT 228
E A VF E+ + G+P YN ++GL Q+A+E+ M D C P +Y+
Sbjct: 34 EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+IN + K +NEM + PN+ TY +++ A + ++A E+ + +
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 289 GIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G+ PD YN+++ EA + +M G EPD +YN ++D + G
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 207
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 49/265 (18%)
Query: 77 VDSNTIWDAF---DSLPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKS 133
V +T+ + F L T++T++++ L+++ P V+ +I A +
Sbjct: 89 VSYSTVINGFFKEGDLDKTYSTYNEM--------LDQRISPNVVTYNS---IIAALCKAQ 137
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
KA ++ S +P TY ++ +C SG ++A ++MR G+ P V YN
Sbjct: 138 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 197
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-------------------------- 227
S +D L K G +A +IF M + +P TY
Sbjct: 198 SLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 257
Query: 228 ---------TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEA 278
++++ Y K K A+ +F++MR PN TY A++ + G E+A
Sbjct: 258 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 317
Query: 279 EEIFEQLQGAGIEPDVYAYNALMEA 303
FEQ+ G+ P YN+L+
Sbjct: 318 MLYFEQMIDEGLSPGNIVYNSLIHG 342
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 29/302 (9%)
Query: 67 QQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWDPIVLMSCVS 122
+ IL + R + NTI+ F+S+ +H +I + +R+ K D I +
Sbjct: 354 ELILEMLDRGICLNTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST--- 408
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LI+ Y +A ++ P TY+ L+ YC ++ A +FREM
Sbjct: 409 --LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMES 466
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ P + YN + GL + A E++ + + Q TY ++++ K +
Sbjct: 467 SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDD 526
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL++F + K T+ +++A + G +EA+++F G+ P+ + Y + E
Sbjct: 527 ALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 586
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSV---K 348
+S GC D N +V R L G+ + + LS+ K
Sbjct: 587 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV----RELLQRGEITRAGTYLSMIDEK 642
Query: 349 HY 350
H+
Sbjct: 643 HF 644
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + L+ + G L+ A+AV +M YG+ P YNS I G K G A+E
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ M+ C+P+ +YT++++ + K K A + NEM + KPN + L++AF
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRMHMGCEPDRA 319
+E EA EIF ++ G +PDVY +N+L+ + L + G +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 320 SYNIMVDAYGRAG 332
+YN +++A+ R G
Sbjct: 531 TYNTLINAFLRRG 543
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 92 THATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI 151
TH DD V + + P V C LI Y ++ L A ++ + C
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDV---CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +L+ +C G +++A V EM GL P+ V +N I K +AVEI
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M R C+P T+ +I+ + + AL L +M S N TY L+NAF R
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G +EA ++ ++ G D YN+L+ +A L +M G P S
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 321 YNIMVDAYGRAGLHE 335
NI+++ R+G+ E
Sbjct: 602 CNILINGLCRSGMVE 616
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K A + +++ + TY L+ A+ G +++A + EM G P + YNS
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I GL + G KA +F++M RD PS + ++IN ++ A++ EM
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
P+I T+ +L+N R G E+ +F +LQ GI PD +N LM
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 43/252 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++E + HK A + ++L + PT T+ +++KA+C ++ A ++ R+M K+
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P++V+Y + I L K +A+++ + M C P ET+ +I K + A
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF--------------------- 282
K+ N M P+ TY L+N + G + A+++F
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 283 -----------EQLQGAGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRAS 320
+ + GI PDV YN+L+ Y L + GC+P+ S
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 321 YNIMVDAYGRAG 332
Y I+VD + + G
Sbjct: 427 YTILVDGFCKLG 438
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 11/225 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ +A + E+ C P T+ L+ C ++ A + R+M G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ + V YN+ I+ L+ G ++A ++ M TY +I +A + A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
LF +M P+ + L+N R G+ EEA E +++ G PD+ +N+L+
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 303 --AYRLISRMHM-------GCEPDRASYNIMVDAYGRAGLHEGKC 338
A R+ + M G PD ++N ++ + G C
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 101/255 (39%), Gaps = 16/255 (6%)
Query: 105 QLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS-RCIPTEDTYALLLKA 163
+L + K + IV + I ++ Y + + LE+ + C PT +Y ++L+
Sbjct: 132 RLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 164 YCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPS 223
+ A VF +M +PP+ + + A+ + + M + C P+
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 224 TETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
+ Y +I+ K ++ AL+L EM C P+ T+ ++ + EA ++
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 284 QLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-------PDRASYNIMVDAY-------- 328
++ G PD Y LM I R+ + P+ +N ++ +
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 329 GRAGLHEGKCSYSLV 343
+A L + SY +V
Sbjct: 372 AKAVLSDMVTSYGIV 386
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ C +G +E +FR+++ G+PP V +N+ + L KGG A +
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 212 FQRMKRDCCQPSTETYTLMI 231
D P+ T+++++
Sbjct: 692 LDEGIEDGFVPNHRTWSILL 711
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + + Y ++L P T+ LL A +G LE A VF EM
Sbjct: 285 VIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHL 344
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G YN+++D + K GN A+++ M+ + +P+ TY+ +++ + K K A
Sbjct: 345 GSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEA 404
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LKL +M+S + + + Y L+ + + G +E + E+++ GIE D YN+L+
Sbjct: 405 LKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLING 464
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLH 334
Y R+ M G P +Y+ ++D Y +AG+H
Sbjct: 465 YGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMH 506
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL Y +G ++ V EM K G+ V YNS I+G K G + Q M+
Sbjct: 423 YNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMR 482
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
PS TY+ +I++Y KA A ++ + + K ++ +++ ++ A+ GL E
Sbjct: 483 AQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVE 542
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A + +++ GI+P+V YN +++A+
Sbjct: 543 CALSLLDEMMKMGIKPNVVTYNTIIDAF 570
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ + ++A + +M+ + V YN+ + +K G + +
Sbjct: 383 PNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATV 442
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M++ + T TY +IN YGK + M L +MR+ P++ TY+ L++ +++
Sbjct: 443 CEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSK 502
Query: 272 EGLCEEAEEIFEQLQGAGIEPDV---------YAYNALME-AYRLISR-MHMGCEPDRAS 320
G+ +A ++ + +G++ DV A N L+E A L+ M MG +P+ +
Sbjct: 503 AGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVT 562
Query: 321 YNIMVDAYGRA 331
YN ++DA+G++
Sbjct: 563 YNTIIDAFGKS 573
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 47/223 (21%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRM 215
++ L+ AY SGL +A V M+ GL P+ V YN+ ID KGG + + + F++M
Sbjct: 247 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 306
Query: 216 KRDCCQPSTE-----------------------------------TYTLMINLYGKASKS 240
+D P + TY ++ K
Sbjct: 307 LQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNM 366
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+AL++ +M ++ KPN+ TY+ L++ F++ +EA ++ E+++ I+ D YN L
Sbjct: 367 GLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTL 426
Query: 301 MEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ Y + +G E D +YN +++ YG+ G
Sbjct: 427 LAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQG 469
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 57/267 (21%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YG++ F ++ P+ TY+ L+ Y +G+ A V+ + ++ G
Sbjct: 461 LINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 520
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK-------- 236
L V+++S+ID L K G + A+ + M + +P+ TY +I+ +GK
Sbjct: 521 LKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEED 580
Query: 237 -------------------------------------ASKSFMALKLFNEMRSHKCKPNI 259
+ + F L+LF +M +PN+
Sbjct: 581 SDIGDMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNV 640
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY--AYNALM-------EAYRLISRM 310
T++A++NA +R E+A + EQL+ + VY AY LM +A L +++
Sbjct: 641 VTFSAILNACSRCNSFEDAALLLEQLR--LFDNSVYGVAYGLLMGHREAWSQARSLFNQL 698
Query: 311 -HMGCEPDRASYNIMVDAYGRAGLHEG 336
M A YN + D G +G
Sbjct: 699 GRMDSPTSSAFYNALTDVLWHFGQRQG 725
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
T I GK + +A + F+ + + ++AL++A+AR GL EA + E ++G
Sbjct: 213 TAAIGALGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKG 272
Query: 288 AGIEPDVYAYNALMEA--------------YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
AG+ P +YNA+++A +R + + G PDR ++N ++ A RAG
Sbjct: 273 AGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM--LQDGLCPDRKTFNSLLAACSRAG 329
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y L+ PT TY LL +G +E AE +F EM +YG + +YN ++G
Sbjct: 927 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 986
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GN +K +FQ M P ++YT++I+ KA + L F ++ +P++ T
Sbjct: 987 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1046
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR-M 310
Y L++ + EEA +F ++Q GI P++Y YN+L+ EA ++ +
Sbjct: 1047 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1106
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
G +P+ +YN ++ Y +G
Sbjct: 1107 TKGWKPNVFTYNALIRGYSVSG 1128
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 15/220 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI ++L AE + E+ + C P E TY LLL A S +E+ V EM + G
Sbjct: 840 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 899
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V YN+ I GL+K ++A++++ + P+ TY +++ KA + A
Sbjct: 900 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 959
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
LFNEM + CK N Y L+N G E+ +F+ + GI PD+ +Y +++
Sbjct: 960 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 1019
Query: 304 ------------YRLISRMHMGCEPDRASYNIMVDAYGRA 331
+R + + MG EPD +YN+++D G++
Sbjct: 1020 CKAGQLNDGLTYFRQL--LEMGLEPDLITYNLLIDGLGKS 1057
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
+ AE + E+L+ C Y +LL + ++G EK +F++M G+ P Y
Sbjct: 956 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1015
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
ID L K G + F+++ +P TY L+I+ GK+ + A+ LFNEM+
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1075
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL 306
PN+ TY +L+ + G EA +++E+L G +P+V+ YNAL+ Y +
Sbjct: 1076 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1126
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ A C G + +A +F EM++ G+ P YNS I G LK A+E+F+ M
Sbjct: 417 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMD 476
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P+ T+ L IN YGK+ +S A++ + M+S P++ A++ A+ G
Sbjct: 477 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 536
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A+ +F +L+ G+ PD Y ++ EA ++ M C PD N ++
Sbjct: 537 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLI 596
Query: 326 DAYGRAG 332
D +AG
Sbjct: 597 DTLYKAG 603
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F Y+++ + P T+ L + Y SG KA + M+ G+ P V N+ + GL
Sbjct: 472 FKYMDIHGPK--PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
K G A +F +K P T TYT+MI KASK A+K+F +M + C P++
Sbjct: 530 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 589
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISR 309
+L++ + G +EA +IF QL+ +EP YN L+ E L+
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 649
Query: 310 M-HMGCEPDRASYNIMVDAYGRAG 332
M H P+ +YN ++D + G
Sbjct: 650 MYHSNYPPNLITYNTILDCLCKNG 673
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 30/305 (9%)
Query: 54 FVDGIFPVLSPTAQQILRFVQREVDSNTIWDAFD----SLPPTHATWDDLINVSVQLRL- 108
VDG+ P + + ++ F +R +W + + P ++ I V Q R
Sbjct: 266 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRF 325
Query: 109 -----------NKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTY 157
N+ P V+ V I ++ G+ S A+ + ++ S P TY
Sbjct: 326 DEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRIS---DAKDVFWKMKKSDQKPDRVTY 382
Query: 158 ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
LL + +G + ++ M+ G + V Y + ID L + G +A+E+F MK+
Sbjct: 383 ITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQ 442
Query: 218 DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEE 277
P +Y +I+ + KA + AL+LF M H KPN T+ +N + + G +
Sbjct: 443 KGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIK 502
Query: 278 AEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIMVD 326
A + +E ++ GI PDV A NA++ A R+ + MG PD +Y +M+
Sbjct: 503 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 562
Query: 327 AYGRA 331
+A
Sbjct: 563 CCSKA 567
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +++D P +Y +++ C +G L FR++ + GL P + YN IDGL K
Sbjct: 997 FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1056
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
++AV +F M++ P+ TY +I GKA K+ A K++ E+ + KPN+ T
Sbjct: 1057 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1116
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
Y AL+ ++ G + A + ++ G P+
Sbjct: 1117 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1148
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+G++ + + E+ P +Y + ++ + ++A + EM
Sbjct: 279 VLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENE 338
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P + + I L G A ++F +MK+ +P TY +++ + +S
Sbjct: 339 GCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSV 398
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
++++N M++ N+ YTA+++A + G EA E+F++++ GI P+ Y+YN+L+
Sbjct: 399 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 458
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
+A L M + G +P+ ++ + ++ YG++G
Sbjct: 459 FLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSG 498
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+A + + G L A M++ G+ +A YN + L+K G ++A+E+++ M
Sbjct: 206 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVM 265
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D PS TY++++ +GK L L EM +H KPN+ +YT + +
Sbjct: 266 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRF 325
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRASYNIM 324
+EA I +++ G +PDV + L++ R+ + PDR +Y +
Sbjct: 326 DEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 385
Query: 325 VDAYGRAG 332
+D + G
Sbjct: 386 LDKFADNG 393
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L I YG+ KA Y EL+ S+ I P +L SG L A+ VF E++
Sbjct: 488 VLFINYYGKSGESIKAIQRY-ELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 546
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P + Y I K +AV+IF M + C P +I+ KA +
Sbjct: 547 AMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGD 606
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A ++F +++ +P TY L+ REG +E + E++ + P++ YN ++
Sbjct: 607 EAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTIL 666
Query: 302 EAY-----------RLISRMHMGCEPDRASYNIMV 325
+ L S GC PD +SYN ++
Sbjct: 667 DCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVI 701
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++K + ++A +F +M + P +V NS ID L K G +A +I
Sbjct: 552 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQI 611
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F ++K +P+ TY ++ G+ K + L EM PN+ TY +++ +
Sbjct: 612 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 671
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGCEPDRASY 321
G +A ++ + G PD+ +YN ++ EA+ + +M PD A+
Sbjct: 672 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATL 731
Query: 322 NIMVDAYGRAGL 333
++ ++ + GL
Sbjct: 732 CTILPSFVKIGL 743
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ L++ AE +F EM++ G P YN +D + K ++ +++ + M
Sbjct: 836 SYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 895
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
R + + TY +I+ K+ + A+ L+ + S P CTY L++ + G
Sbjct: 896 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 955
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
E+AE +F ++ G + + YN L+ +R+ + G PD SY I+
Sbjct: 956 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1015
Query: 325 VDAYGRAG-LHEG 336
+D +AG L++G
Sbjct: 1016 IDTLCKAGQLNDG 1028
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+ ++A Y ++ +P+ TY++L+ A+ +E + REM +G+ P+
Sbjct: 251 KSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 310
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
Y I L + +A I M+ + C+P T+T++I + A + A +F +M
Sbjct: 311 SYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 370
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
+ KP+ TY L++ FA G + EI+ ++ G +V AY A+++A + R+
Sbjct: 371 KKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 430
Query: 311 -----------HMGCEPDRASYNIMVDAYGRA 331
G P++ SYN ++ + +A
Sbjct: 431 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 462
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 196 IDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I L P +A+E F+ +R +T + M++L + ++F+ M+
Sbjct: 140 IHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQI 199
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL-------------M 301
K N+ T+ A+ EG A ++ AGI + Y YN L +
Sbjct: 200 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 259
Query: 302 EAYRLISRMHMGCEPDRASYNIMVDAYGR 330
E Y+++ M G P +Y++++ A+G+
Sbjct: 260 EVYKVM--MVDGVVPSVRTYSVLMVAFGK 286
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+ G+ ++A + E+ +P TY L+ +G +A ++ E+
Sbjct: 1049 LLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTK 1108
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTET---YTLMINLYGKASKS 240
G P+ YN+ I G G+ A + RM C P++ T + LM S S
Sbjct: 1109 GWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDS 1168
Query: 241 FMALKLF 247
+ + F
Sbjct: 1169 YEIIVTF 1175
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++LD R P TY ++ A C + ++KA V M K G+ P + YNS + G G
Sbjct: 106 KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 165
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
P++A+ ++M+ D +P TY +++ K + A K+F+ M KP+I TY
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HM 312
L+ +A +G E + + + GI P+ Y ++ L+ EA + S+M
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285
Query: 313 GCEPDRASYNIMVDAYGRAGLHEGKCSY 340
G P+ +Y ++D ++G E Y
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 128/309 (41%), Gaps = 50/309 (16%)
Query: 90 PPTHATWDDLIN-VSVQLRLNKKWDPIVLMSCVSI-LLIEAYGQKSLHKKAEFTYLELLD 147
PP ++ +IN + L+K D + + V+ +I A + KA ++
Sbjct: 85 PPDVVSYSTVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 148 SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQK 207
S +P TY ++ +C SG ++A ++MR G+ P V YNS +D L K G +
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 208 AVEIFQRMKRDCCQPSTETY-----------------------------------TLMIN 232
A +IF M + +P TY ++++
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
Y K K A+ +F++MR PN TY +++ + G E+A FEQ+ G+ P
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324
Query: 293 DVYAYNALMEAYRLISRMHMGCE-----PDRAS------YNIMVDAYGRAG--LHEGKCS 339
D YN+L+ + + + E DR +N ++D++ + G + GK
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384
Query: 340 YSLVELSVK 348
+V + VK
Sbjct: 385 DLMVRIGVK 393
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC--CQPSTETYT 228
E A VF E+ + G+P YN ++GL Q+A+E+ M D C P +Y+
Sbjct: 34 EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 229 LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA 288
+IN + K ++M + PN+ TY +++ A + ++A E+ + +
Sbjct: 93 TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 289 GIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
G+ PD YN+++ EA + +M G EPD +YN ++D + G
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 200
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 1/185 (0%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +++L+ AY +E+A VF +MR+ GL P+AV Y + ID L K G + A+
Sbjct: 254 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F++M + +P + Y +I+ K A +LF EM + + +++++ +
Sbjct: 314 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL-ISRMHMGCEPDRASYNIMVDAYGR 330
EG E+ ++F+ + G++PD+ EA L ++ G P+ +Y +M +
Sbjct: 374 EGRVIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 433
Query: 331 AGLHE 335
GL E
Sbjct: 434 QGLLE 438
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 30/242 (12%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ AY ++ ++A + ++ P TY ++ C SG +E A F +M
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM-KRDCCQPSTETYTLMINLYGKASKSFM 242
GL P ++VYNS I L +KA E+F M R C ST + +I+ + K +
Sbjct: 321 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL-STIFFNSIIDSHCKEGRVIE 379
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KP+I T G +EA+++F G+ P+ + Y + E
Sbjct: 380 SGKLFDLMVRIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 429
Query: 303 AY-----------RLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSV---K 348
+S GC D N +V R L G+ + + LS+ K
Sbjct: 430 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV----RELLQRGEITRAGTYLSMIDEK 485
Query: 349 HY 350
H+
Sbjct: 486 HF 487
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL+A C SG ++ A AV REM + + VYN IDG + G+ +A ++ ++MK
Sbjct: 665 YETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK 724
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D P+ TYT IN KA A + +EM KPN+ TYT L+ +AR L +
Sbjct: 725 EDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPD 784
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
A + FE+++ AG++PD AY+ L+ + L+SR
Sbjct: 785 RALKCFEEMKLAGLKPDEAAYHCLVTS--LLSR 815
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L S P Y LL++A+C G +++A + +M+K + PS + I+G
Sbjct: 510 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV 569
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ ++A++I M+R C P+ TY +I+ + ++ A+ + N+M PN T
Sbjct: 570 AGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHT 629
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA-- 319
YT ++ +A G +A E F +++ G++ DVY Y L+ A RM R
Sbjct: 630 YTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 689
Query: 320 ---------SYNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 690 SQKIARNTFVYNILIDGWARRG 711
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A +F EM K GL P +YN I+ K GN +A+ I ++M
Sbjct: 489 TYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKM 548
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ QPS + +I + A AL + + MR C P + TY AL++ R+
Sbjct: 549 QKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQV 608
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
E A + ++ AGI P+ + Y +M Y
Sbjct: 609 ERAVSVLNKMSIAGITPNEHTYTIIMRGY 637
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 111 KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLL 170
K + I L +LI +G+ + + A+ + E + Y+ ++ A+C SG +
Sbjct: 339 KAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNM 398
Query: 171 EKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLM 230
++AE + EM + G+ Y+S + G + +K + +F+R+K C PS +Y +
Sbjct: 399 DRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 458
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
INLY K K A+ + EM S K N TY+ L++ F A IFE++ +G+
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGL 518
Query: 291 EPDVYAYNALMEAY----------RLISRMHMG-CEPDRASYNIMVDAYGRAG 332
+PD YN L+EA+ R++ +M +P ++ +++ + AG
Sbjct: 519 QPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 571
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY ++++ Y +G + KA F ++++ GL +Y + + K G Q A+ +
Sbjct: 625 PNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 684
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +T Y ++I+ + + + A L +M+ PNI TYT+ +NA +
Sbjct: 685 TREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCK 744
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
G + A+ + +++ G++P++ Y L++ A + M + G +PD A+
Sbjct: 745 AGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAA 804
Query: 321 YNIMVDA-YGRAGLHEG 336
Y+ +V + RA + EG
Sbjct: 805 YHCLVTSLLSRATVMEG 821
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 46/256 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLIEA+ + +A ++ R P+ + +++ + ++G +++A + MR+
Sbjct: 527 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRS 586
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---GKASKS 240
G P+ + YN+ I GL++ ++AV + +M P+ TYT+++ Y G +K+
Sbjct: 587 GCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKA 646
Query: 241 F--------------------------------MALKLFNEMRSHKCKPNICTYTALVNA 268
F AL + EM S K N Y L++
Sbjct: 647 FEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDG 706
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPD 317
+AR G EA ++ +Q++ G+ P+++ Y + + A +I M +G +P+
Sbjct: 707 WARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPN 766
Query: 318 RASYNIMVDAYGRAGL 333
+Y ++ + RA L
Sbjct: 767 LKTYTTLIKGWARASL 782
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++ Y G A A F MR G+ P+A V+ S + + + A+
Sbjct: 275 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 334
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MK + + + TY+++I+ +GK + + A LF E +++ N Y+ +++A +
Sbjct: 335 TEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQ 394
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS----------RMHMGC-EPDRAS 320
G + AEE+ +++ GI+ + AY+++M Y +I R+ C P S
Sbjct: 395 SGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 454
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 455 YGCLINLYVKIG 466
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +Y L+ Y G + KA A+ +EM G+ + Y+ I G + + A I
Sbjct: 450 PSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRI 509
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M + QP Y L+I + K A+++ +M+ + +P+ + ++ FA
Sbjct: 510 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV 569
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
G + A +I + ++ +G P V YNAL+ A ++++M + G P+ +
Sbjct: 570 AGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHT 629
Query: 321 YNIMVDAYGRAG 332
Y I++ Y G
Sbjct: 630 YTIIMRGYAATG 641
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 101/255 (39%), Gaps = 46/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I Y ++ A T+ + P + L+ AY ++ + A + EM+
Sbjct: 282 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAE 341
Query: 184 GLPPSAVVYNSYIDGLLK-----------------------------------GGNPQKA 208
G+ + V Y+ I G K GN +A
Sbjct: 342 GIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRA 401
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E+ M+ D + Y M++ Y L +F ++ P+I +Y L+N
Sbjct: 402 EELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINL 461
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
+ + G +A I ++++ +GI+ + Y+ L+ A+R+ M G +PD
Sbjct: 462 YVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPD 521
Query: 318 RASYNIMVDAYGRAG 332
RA YN++++A+ + G
Sbjct: 522 RAIYNLLIEAFCKMG 536
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +A ++ + P TY + A C +G +++A+ V EM
Sbjct: 702 ILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDV 761
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYT-LMINLYGKAS 238
GL P+ Y + I G + P +A++ F+ MK +P Y L+ +L +A+
Sbjct: 762 GLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRAT 817
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
Q V F+R+ + PS + LMI Y K A F MR+ +PN +T+L
Sbjct: 263 QAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSL 318
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
V+A+A A E+++ GIE + Y+ L+ + I+
Sbjct: 319 VHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKIN 361
>gi|125586172|gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japonica Group]
Length = 523
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A H A + L + P +YA ++ C G ++A+ EM G
Sbjct: 134 ILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARG 193
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ +++ + L K G +A+E+F M+ C+P+ TY +I + AL
Sbjct: 194 FRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEAL 253
Query: 245 KLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL--- 300
L N+++ S K P+I T+T +++ F + G +EA IF G+ P ++ YNAL
Sbjct: 254 DLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNG 313
Query: 301 -------MEAYRLISRM--HMGCEPDRASYNIMVDAYGRAG 332
++AY L+ M + C PDR S++I++ A RAG
Sbjct: 314 HCKEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAG 354
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T++ ++ C G + +A VF MR G P+ YNS I GL G ++A+++
Sbjct: 196 PTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDL 255
Query: 212 FQRMKRDCCQ-PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
++K Q P T+T++++ + K ++ A +F++ + P I TY AL+N
Sbjct: 256 LNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHC 315
Query: 271 REG-----------LCEEAE-------------------------EIFEQLQGAGIEPDV 294
+EG +C A + +++++ AG E D
Sbjct: 316 KEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKRMERAGFEADG 375
Query: 295 YAYNAL 300
A + L
Sbjct: 376 RALDTL 381
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++ V++ ++RD + Y +++ A A+ LF +R + P+ +Y
Sbjct: 110 EERVKVLDLLQRDDGALTVSDYNDILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATA 169
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGC 314
V R+G +EA+E +++ G P V ++A++ A + M +GC
Sbjct: 170 VQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGC 229
Query: 315 EPDRASYNIMV 325
EP +YN ++
Sbjct: 230 EPTIRTYNSLI 240
>gi|240255936|ref|NP_193372.6| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|374095491|sp|Q8GWE0.3|PP314_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16390, chloroplastic; AltName: Full=Chloroplastic
RNA-binding protein P67; Flags: Precursor
gi|332658341|gb|AEE83741.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 702
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + +K + S LEK+E +F EM + G+ P + + I + G P++AVE F++M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C+P T MI+ YG+A MAL L++ R+ K + + T++ L+ + G +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
I+E+++ G++P++ YN L+++ R + G P+ ++Y +V
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 326 DAYGRA 331
AYGRA
Sbjct: 358 RAYGRA 363
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI++ G+ +A+ Y +L+ + P TYA L++AY + + A A++REM++ G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMA 243
L + ++YN+ + +A EIFQ MK + C P + T++ +I +Y + + A
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+MR +P + T+++ + + ++ F+Q+ GI PD
Sbjct: 441 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L++ Y +SG + ++ EM+ G+ P+ V+YN ID + + P +A I++ +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TY ++ YG+A AL ++ EM+ + Y L++ A
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYV 401
Query: 276 EEAEEIFEQLQGAGI-EPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNI 323
+EA EIF+ ++ +PD + +++L+ Y L+ G EP
Sbjct: 402 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 324 MVDAYGRA 331
++ YG+A
Sbjct: 462 VIQCYGKA 469
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Q + K+A + ++ C P T A ++ AY +G ++ A +++ R
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
AV +++ I GN + I++ MK +P+ Y +I+ G+A + + A
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK 335
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++ ++ ++ PN TY ALV A+ R ++A I+ +++ G+ V YN L+
Sbjct: 336 IIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMC 395
Query: 302 -------EAYRLISRMH--MGCEPDRASYNIMVDAYGRAG 332
EA+ + M C+PD +++ ++ Y +G
Sbjct: 396 ADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVV-YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A V + + P V+ YN + K + +K+ ++F M +P T+T
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 215
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ + A++ F +M S C+P+ T A+++A+ R G + A ++++ +
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 290 IEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
D ++ L+ Y + +G +P+ YN ++D+ GRA
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA 328
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 9/169 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T++ L+ Y SG + +AEA +MR+ G P+ V S I K V
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVV 476
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F ++ P ++N+ + + KL + K KP + +V
Sbjct: 477 RTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIG-KLIGCV--EKAKPKL---GQVVKML 530
Query: 270 AREGLCEEA---EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
E CEE +E E + G + N L++ ++++ CE
Sbjct: 531 VEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACE 579
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P E T+ +L++ YC +GL K + +MR G+ P+ V+YN+ I K G A
Sbjct: 178 CEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAE 237
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK----CKPNICTYTAL 265
++ +M+ D P ET+ I+ + K A ++F +M+ + PN+ TY +
Sbjct: 238 KLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLM 297
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN----------ALMEAYRLISRM-HMGC 314
+ F +EG+ EEA+ + + ++ ++ +YN L+EA+ ++ M +G
Sbjct: 298 LMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGI 357
Query: 315 EPDRASYNIMVDAYGRAGL 333
EPD SYNI++D + G+
Sbjct: 358 EPDIYSYNIVMDGLCKNGM 376
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 81/156 (51%)
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
+C P TY+ ++ C +G L+ A+ F EM GL P + +Y+++I + G A
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
++ + M++ C + +TY +I G ++ F L +EMR P++CTY ++N
Sbjct: 579 FQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNC 638
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G +A + +++ GI P++ ++ L++A+
Sbjct: 639 LCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ Y +LLK+ +E ++++M + P A +N I L G+ + A E+
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +M C+P+ T+ +++ Y +A + L+L +MR+ PN Y L+++F +
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRMHMGCE-----P 316
EG +AE++ ++++ G+ P V +N+ ++EA R+ M + E P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289
Query: 317 DRASYNIMVDAYGRAGLHE 335
+ +Y +M+ + + G+ E
Sbjct: 290 NVITYKLMLMGFCKEGMLE 308
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
++Y + L +G L +A V +EM G+ P YN +DGL K G A +
Sbjct: 327 ESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGL 386
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M R+ P T TY+ +++ Y K F A L +EM S+ C PN T L+++ +EG
Sbjct: 387 MIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGR 446
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
EAE + +++ G D N ++ A
Sbjct: 447 ISEAENLLQKMNEKGYGVDTVTCNIIINA 475
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 32/311 (10%)
Query: 54 FVDGIFPVLSPTAQQILRFVQREVDSNTIWDA---FDSLP-----PTHATWDDLINVSVQ 105
+ D + +SP A + DS + DA FD +P P T+ L+ +
Sbjct: 135 YKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCR 194
Query: 106 LRL-NKKWDPIVLMSCVSIL--------LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
L +K + + M + IL LI ++ ++ AE ++ + +P +T
Sbjct: 195 AGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVET 254
Query: 157 YALLLKAYCMSGLLEKAEAVFREMR---KYGLP-PSAVVYNSYIDGLLKGGNPQKAVEIF 212
+ + A C SG + +A +FR+M+ + GLP P+ + Y + G K G ++A +
Sbjct: 255 FNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLV 314
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
MKR+ + E+Y + + + K A + EM +P+I +Y +++ +
Sbjct: 315 DTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKN 374
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASY 321
G+ +A + + GI PD Y+ L+ EA L+ M C P+ +
Sbjct: 375 GMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTC 434
Query: 322 NIMVDAYGRAG 332
N+++ + + G
Sbjct: 435 NVLLHSLWKEG 445
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 85/223 (38%), Gaps = 34/223 (15%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E+L P +Y +++ C +G+L A + M + G+ P V Y++ + G G
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKG 410
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+A + M + C P+T T ++++ K + A L +M + T
Sbjct: 411 KVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCN 470
Query: 264 ALVNAFAREGLCEEAEEIF-----------------------EQLQGAGIEPDVYAYNAL 300
++NA G ++A EI + + G PD+ Y+ +
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTI 530
Query: 301 MEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
+ + I M G +PD A Y+ + ++ R G
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREG 573
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 138 AEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ F L+ ++ R C T TY L+ + + + EMR+ G+ P YN +
Sbjct: 577 SAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHML 636
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ L +GG A + M + P+ ++ ++I + KA + ++F E+ + C
Sbjct: 637 NCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCG 695
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-------------- 302
YT + N G EA+E+FE + + Y L++
Sbjct: 696 HKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDV 755
Query: 303 AYRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+RLI + G + D AS+ ++D +G+ G
Sbjct: 756 LHRLIDK---GYQFDPASFMPVIDGFGKMG 782
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 199 LLKGGNPQKAVEIFQRMKRDCC--QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
L K G KA+ F+ ++ + QPS Y +++ + ++ + L+ +M +
Sbjct: 85 LAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVS 144
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RL 306
P T+ L+ G E+A E+F+++ G EP+ + + L+ Y L
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204
Query: 307 ISRMH-MGCEPDRASYNIMVDAYGRAG 332
+ +M MG P+ YN ++ ++ + G
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEG 231
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 46/255 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI+AY + L + E Y E+ D P YA ++ Y +G +K + REM++
Sbjct: 357 LLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQA 416
Query: 184 GLPPSAVVYN-----------------------------------SYIDGLLKGGNPQKA 208
G+ P A VYN S ID K G P +A
Sbjct: 417 GVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEA 476
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+++ +M D C P+ +T+ ++I+ G+ + ++ EMRS PN+ TYT LV+
Sbjct: 477 RKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDV 536
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI----SRMHM-------GCEPD 317
+A+ L ++A E + ++ G+ P AY+AL AY + +H+ E +
Sbjct: 537 YAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEIN 596
Query: 318 RASYNIMVDAYGRAG 332
A N++++A+ AG
Sbjct: 597 LAMLNLLINAFSMAG 611
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y LL Y G L++ + V +R G+ + + Y ID + G + +
Sbjct: 315 PNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEAL 374
Query: 212 FQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+Q M RDC +P+T Y MI +Y + +KL EM+ P+ Y ++N F
Sbjct: 375 YQEM-RDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFG 433
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNAL----------MEAYRLISRM-HMGCEPDRA 319
R E+A F ++Q GIEPDV ++N+L +EA +L +M + GC P
Sbjct: 434 RTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQ 493
Query: 320 SYNIMVDAYG 329
++NI++ G
Sbjct: 494 TFNIVIHGLG 503
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 124 LLIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
++I YG ++ LHK E E L S Y L+ AY + KA +M+
Sbjct: 149 VVIHGYGRERKLHKALEVA--EKLGSNL--QRRGYNALVGAYAQNRDYGKALETLSKMKT 204
Query: 183 YGLPPSAVVYNSYIDGLLKG-GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G PP V Y I G + +FQ M+ + Q + Y +I G+A K
Sbjct: 205 LGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEMQAEGVQVDGKVYNDLIFACGQAHKPN 264
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+ ++++ + +Y +L+ + + G EAE + E+++ G+ P++ AYN L+
Sbjct: 265 EGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLL 324
Query: 302 EAYRLISRMHM-----------GCEPDRASYNIMVDAYGRAGL 333
Y ++ G ++ +Y +++DAY RAGL
Sbjct: 325 GGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGL 367
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 9/230 (3%)
Query: 89 LPPTHATWDDLINVSVQ----LRLNKKWDPIVLMSCVSI-----LLIEAYGQKSLHKKAE 139
+ P +W+ LI+ + L K + +V C ++I G+
Sbjct: 453 IEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVN 512
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
E+ P TY L+ Y + L + A + M++ G+ PS Y++ +
Sbjct: 513 EMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAY 572
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNI 259
+ G ++ + + Q M+++ + + L+IN + A +S A +F ++ +
Sbjct: 573 AQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADK 632
Query: 260 CTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
TYT L+ A R +E +F+++ AG PD A + L A+R R
Sbjct: 633 ITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPDGKAKDMLRSAFRFKER 682
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Query: 203 GNPQKAVEIFQRMKRDC-CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G A E+ + ++ + C+ +++I+ YG+ K AL++ ++ S+ +
Sbjct: 122 GRSSFASELLEWLRENSFCRTYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRG--- 178
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRM 310
Y ALV A+A+ +A E +++ G PDV +Y +++A +RL M
Sbjct: 179 YNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEM 238
Query: 311 HM-GCEPDRASYNIMVDAYGRA 331
G + D YN ++ A G+A
Sbjct: 239 QAEGVQVDGKVYNDLIFACGQA 260
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 19/230 (8%)
Query: 113 DPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEK 172
DP L S L+ A +K L +A+ + + S P Y L+ A+C SG L++
Sbjct: 215 DPATLAS-----LLGALSKKRLASEAQAMF-DSYKSVFTPDVVLYTTLVHAWCRSGRLDE 268
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
AE VF EM++ G+ P+ Y + ID + + G +A E+ +M C P+T T+ ++
Sbjct: 269 AERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMR 328
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC--EEAEEIFEQLQGAGI 290
+ KA +S L++ N+MR C+P+I TY L+ +G + A ++ ++ G
Sbjct: 329 AHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGC 388
Query: 291 EPDVYAYNALME----------AYRLISRMH-MGCEPDRASYNIMVDAYG 329
PD + +N +++ A +L RM + C+P+ +YN+++ +
Sbjct: 389 IPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFN 438
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+A + +A+ +++DS C P T+ +++A+ +G E+ V +MR+ G
Sbjct: 291 VIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLG 350
Query: 185 LPPSAVVYNSYIDGLLKGG--NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
P + YN ++ G N A+++ RM C P T+ M+ L
Sbjct: 351 CEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNA 410
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A KL+ M+ +CKPN+ TY L+ F E + I + G+EP+V Y AL+E
Sbjct: 411 ARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIE 470
Query: 303 AY 304
A+
Sbjct: 471 AF 472
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMI 231
A + EMR+ +P SA + + I ++ P +A ++F+RM+ P T ++
Sbjct: 164 ARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLL 223
Query: 232 NLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIE 291
K + A +F+ +S P++ YT LV+A+ R G +EAE +F ++Q AG+
Sbjct: 224 GALSKKRLASEAQAMFDSYKS-VFTPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVT 282
Query: 292 PDVYAYNALMEA-YR----------LISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
P+VY Y A+++A YR L + GC P+ A++N ++ A+ +AG E
Sbjct: 283 PNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSE 337
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 12/229 (5%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
SC +I Y + +A+ E+++ + T L++ A+C L+ +A F
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
++ K GL P+ + Y+S I GL K G+ ++A E+ + M ++ +P+ T+T +I+ K
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363
Query: 239 KSFMALKLFNEM-RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
+ A +LF ++ RS KPN+ TYTA+++ + +E AE +FE+++ G+ P+ Y
Sbjct: 364 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 423
Query: 298 NALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L++ AY L+ M + G P+ +YN +VD + G E
Sbjct: 424 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAE 472
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Y ++ +AE + + + +P +TY L+ +C +G KA + M G
Sbjct: 391 MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 450
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ YNS +DGL K G ++A ++ ++ + TYT++I+ K + AL
Sbjct: 451 FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQAL 510
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
N+M +P+I YT L+ AF R+ + +++E++F+++ G+ P Y +++ Y
Sbjct: 511 VFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 570
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDA 327
+ +M GC PD SY ++
Sbjct: 571 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISG 604
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI +K ++A +L+L+ S P TY ++ YC L +AE +F M++
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ Y + IDG K GN KA E+ + M + P+T TY +++ K ++ A
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 474
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
KL N ++ + + TYT L++ + +A ++ G +PD++ Y L+ A
Sbjct: 475 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534
Query: 304 Y----------RLISR-MHMGCEPDRASYNIMVDAYGR 330
+ +L + +G P + +Y M+ Y R
Sbjct: 535 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 572
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY +L+ C + +A +M K G P +Y + I + + + ++F +
Sbjct: 492 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 551
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ ETYT MI Y + K +A+K F +M H C P+ +Y AL++ +E
Sbjct: 552 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 611
Query: 276 EEAEEIFEQLQGAGIEP 292
+EA ++++ + G+ P
Sbjct: 612 DEARQLYDTMIDKGLSP 628
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L+ A+C +++ +E +F E+ K GL P+ Y S I G + AV+
Sbjct: 523 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 582
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
FQ+M C P + +Y +I+ K S+ A +L++ M P T L + +
Sbjct: 583 FQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCK 642
Query: 272 EGLCEEAEEIFEQLQ 286
A I E+L
Sbjct: 643 TEDFASAMVILERLN 657
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++++ K +E + E++ PT++TY ++ YC + A F++M +G
Sbjct: 531 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHG 590
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
P ++ Y + I GL K +A +++ M
Sbjct: 591 CAPDSISYGALISGLCKESRLDEARQLYDTM 621
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ Y +K +A Y E+ D P E TY L+K Y + A A+ EMR+ G
Sbjct: 436 LLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNG 495
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ YN I+GL + E+ +R + P+T TY +IN + KA A
Sbjct: 496 VSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAF 555
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
++ +MR PNI TYT+ ++ + R C+ A ++ ++ GI+PD+ AYNA ++ +
Sbjct: 556 GMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTF 615
Query: 305 -----------RLISRMHMGCEPDRASYNIMVDAY 328
L+ + G PD YN V Y
Sbjct: 616 CKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y + +C G + +A + K GL P VYNS++ G +A +
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + TE YT +I+ + K AL+L++EM ++ P+ T+TAL + R
Sbjct: 663 YYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCR 722
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G + A+ + + ++ + P++ YN L+ EA++L M G PD +
Sbjct: 723 SGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782
Query: 321 YNIM 324
Y+I+
Sbjct: 783 YDIL 786
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 143 LELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKG 202
LEL+ +P TY L+ C L +A ++ +M++ G+ PS V Y+S + G +
Sbjct: 384 LELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443
Query: 203 GNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK------ 256
G +A++++ M P+ TYT ++ Y K A L NEMR +
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503
Query: 257 -----------------------------PNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
P TY +++N F + G+ A ++ Q++
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563
Query: 288 AGIEPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNIMVDAYGRAG 332
GI P++ Y + ++ Y LI G +PD A+YN +D + + G
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQG 619
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 11/197 (5%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+PT TY ++ + +G++ A ++R+MRK G+ P+ V Y S+IDG + AV+
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVK 591
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ ++RD QP Y I+ + K AL + P++ Y + V +
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYK 651
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----------PDRA 319
+ EA + + + + D Y L++ + + + E PD
Sbjct: 652 NLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDK 711
Query: 320 SYNIMVDAYGRAGLHEG 336
++ + R+G +G
Sbjct: 712 TFTALTHGLCRSGDIDG 728
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
Q ++ + F L LL P Y + Y ++ +A + M K +
Sbjct: 618 QGNMSRALHFLVL-LLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTE 676
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
+Y + IDG K GN A+E++ M + P +T+T + + ++ A +L ++M
Sbjct: 677 IYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
R PNI TY L+NA R+G +EA ++ +++ +G+ PD Y+ L
Sbjct: 737 RRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 106 LRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYC 165
L KK D ++ + +L+ Y KA + E++ PT TY +L+K
Sbjct: 283 LATGKKMDVVL-----ATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCD 337
Query: 166 MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTE 225
G+ ++ + R+M + GL S +N I GLL+ + A+ + + + D P
Sbjct: 338 AEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLE-LVVDTGVPDVF 396
Query: 226 TYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL 285
TY +I+ K K A+ L+++M+ KP+I TY +L+ + +G +EA +++ ++
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456
Query: 286 QGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRASYNIMVDA 327
G P+ Y LM+ AY L++ M G +YNI+++
Sbjct: 457 PDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILING 509
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I A + +H A + E+ + P E YA+ + C ++A V +MR+
Sbjct: 190 VVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREA 249
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN----LYGKASK 239
G P + Y+S +D L+K G +A+ + +M + M+ L+G+ K
Sbjct: 250 GFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGK 309
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
AL LF+E+ S P TY L+ EG+ +E ++ Q+ G+ Y +N
Sbjct: 310 ---ALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNL 366
Query: 300 LMEA 303
+++
Sbjct: 367 VIKG 370
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 1/164 (0%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++ +P + LL A +F EMR G A +Y+ I ++
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
GG AV +F M +P Y + I+ K + AL++ +MR +P T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 262 YTALVNAFAREGLCEEAEEIFEQ-LQGAGIEPDVYAYNALMEAY 304
Y+++V+ + G +EA + +Q L G + DV LM Y
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGY 301
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 130 GQKSLHKKAEFT--YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
G K+L AE + Y ++ R + + Y L+ + G + A ++ EM + P
Sbjct: 649 GYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIP 708
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
+ + GL + G+ A + M+R P+ TY ++IN + K A +L
Sbjct: 709 DDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLH 768
Query: 248 NEMRSHKCKPNICTYTAL 265
+EM S P+ TY L
Sbjct: 769 DEMLSSGVVPDDTTYDIL 786
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 13/218 (5%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ +++LL ++S+ K+A + EL S P E ++ L+ +C + ++ +A + +
Sbjct: 231 TAMNVLLDTLCKERSV-KRARGAFQELRGS-VPPDESSFNTLVHGWCKARMMNEARDMMK 288
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKAS 238
EM ++G PS + Y S I+ + Q I M+ C P+ TYT++++ GKA
Sbjct: 289 EMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAG 348
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYN 298
++ AL +F+++R C P+ Y +L+ R G E+A + ++++ G+ P V +N
Sbjct: 349 RTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFN 408
Query: 299 ALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
L+ A +++ +M C+PD +Y ++
Sbjct: 409 TLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLL 446
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 12/237 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ + + + +A E+ + P+ TY L++AYCM + A+ EMR G
Sbjct: 270 LVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKG 329
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ + Y + L K G Q+A++IF +++ D C P Y +I + G+A + A
Sbjct: 330 CPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDAN 389
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA- 303
+ ++MR +P + T+ L++A E A ++ +++ +PD+ Y L++
Sbjct: 390 SVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLC 449
Query: 304 ----------YRLISRMHMGCEPDRASYNIMVDAYGRAGLHEGKCSYSLVELSVKHY 350
+ + PD ++Y ++V R G C + L E+ +K +
Sbjct: 450 CKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLF-LEEMVLKGF 505
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++ A G+ ++A + ++ C P Y L+ +G LE A +V +MR
Sbjct: 339 IVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMT 398
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ +N+ I + A+++ +M+ C+P +TYT ++ L K +
Sbjct: 399 GVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVL 458
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
L M P+ TYT LV R G ++ E++ G P ++ + E
Sbjct: 459 RFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFDLVAE 517
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + + +AE +YL+ + C P +Y +++ YC + +EKA A REM + G
Sbjct: 70 LISCLCKAGMLAEAE-SYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ Y+S + K GN KA+++F M C+P + ++++ +A K A
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+LF M S CKP++ TY ++ + +EA + E+++ + P Y L+
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248
Query: 302 -------EAYRLISRMHMG-CEPDRASYNIMV 325
+AY + +M G C +Y++++
Sbjct: 249 CKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI 280
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P ++ LL++ + SG ++ + M + GL P+A++YN+ I L K G +A
Sbjct: 27 PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESY 86
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+RM + C P+ +Y ++I+ Y KA AL EM P Y+++V +F +
Sbjct: 87 LKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRAS 320
G +A ++F ++ G EPD+ +N L+ EA L M+ GC+PD +
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205
Query: 321 YNIMV 325
YN M+
Sbjct: 206 YNTMI 210
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 48/224 (21%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y+ +++++C +G + KA VF EM G P V +N + GL + +A E+
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVN---A 268
F+ M C+P TY MI K K A+ L M+ P TYT L++
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250
Query: 269 FAR-----------------------------EGLCE-----EAEEIFEQLQGAGIEPDV 294
FAR GLC+ EA+E+F++++G GI P V
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310
Query: 295 YAYNALMEAYRLISRMHMGCE-----------PDRASYNIMVDA 327
YN L+E +++ E P+ +Y I++ +
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISS 354
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYA--LLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
++A + ++ + C TE Y+ +L+ C + +A+ +F+EMR G+ P+ V YN
Sbjct: 255 QQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYN 314
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ ++GLL Q A+E+ M P+ TY ++I+ K + A KL + MR
Sbjct: 315 TLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDK 374
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
P++ + L++ AR G ++A E+++++ + V + N L+ EA
Sbjct: 375 GFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEA 434
Query: 304 YRLISRM-HMGCEPDRASYNIMV 325
+ +M G PD+ +Y+ +V
Sbjct: 435 KDFLKQMTDTGIVPDKFTYDKLV 457
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Query: 134 LHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYN 193
L E TY +LD P TY +L+ + C + +E+A + MR G PS ++
Sbjct: 326 LQDAMELTYF-MLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWE 384
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
+ L + G A E+++ M R CQ + ++++ + A +M
Sbjct: 385 VLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDT 444
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
P+ TY LV +G ++A ++ E+L G
Sbjct: 445 GIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 246 LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM---- 301
+ EM+ P++ ++ L+ F + G + +++ AG+ P+ YN L+
Sbjct: 16 IVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLC 75
Query: 302 ------EAYRLISRMHMGCEPDRASYNIMVDAYGRA 331
EA + RM C P+ SYNI++D Y +A
Sbjct: 76 KAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKA 111
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + +K + S LEK+E +F EM + G+ P + + I + G P++AVE F++M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C+P T MI+ YG+A MAL L++ R+ K + + T++ L+ + G +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
I+E+++ G++P++ YN L+++ R + G P+ ++Y +V
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 326 DAYGRA 331
AYGRA
Sbjct: 358 RAYGRA 363
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI++ G+ +A+ Y +L+ + P TYA L++AY + + A A++REM++ G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMA 243
L + ++YN+ + G +A EIFQ MK + C P + T++ +I +Y + + A
Sbjct: 381 LSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+MR +P + T+++ + + ++ F+Q+ GI PD
Sbjct: 441 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L++ Y +SG + ++ EM+ G+ P+ V+YN ID + + P +A I++ +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TY ++ YG+A AL ++ EM+ + Y L++ A G
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYV 401
Query: 276 EEAEEIFEQLQGAGI-EPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNI 323
+EA EIF+ ++ +PD + +++L+ Y L+ G EP
Sbjct: 402 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 324 MVDAYGRA 331
++ YG+A
Sbjct: 462 VIQCYGKA 469
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Q + K+A + ++ C P T A ++ AY +G ++ A +++ R
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
AV +++ I GN + I++ MK +P+ Y +I+ G+A + + A
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK 335
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++ ++ ++ PN TY ALV A+ R ++A I+ +++ G+ V YN L+
Sbjct: 336 IIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMC 395
Query: 302 -------EAYRLISRMH--MGCEPDRASYNIMVDAYGRAG 332
EA+ + M C+PD +++ ++ Y +G
Sbjct: 396 ADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVV-YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A V + + P V+ YN + K + +K+ ++F M +P T+T
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 215
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ + A++ F +M S C+P+ T A+++A+ R G + A ++++ +
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 290 IEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
D ++ L+ Y + +G +P+ YN ++D+ GRA
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA 328
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 9/169 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T++ L+ Y SG + +AEA +MR+ G P+ V S I K V
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVV 476
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F ++ P ++N+ + + KL + K KP + +V
Sbjct: 477 RTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIG-KLIGCV--EKAKPKL---GQVVKML 530
Query: 270 AREGLCEEA---EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
E CEE +E E + G + N L++ ++++ CE
Sbjct: 531 VEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACE 579
>gi|115452873|ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|108708021|gb|ABF95816.1| expressed protein [Oryza sativa Japonica Group]
gi|113548508|dbj|BAF11951.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|125543773|gb|EAY89912.1| hypothetical protein OsI_11461 [Oryza sativa Indica Group]
gi|215712300|dbj|BAG94427.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 545
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ A H A + L + P +YA ++ C G ++A+ EM G
Sbjct: 134 ILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARG 193
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ +++ + L K G +A+E+F M+ C+P+ TY +I + AL
Sbjct: 194 FRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEAL 253
Query: 245 KLFNEMR-SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL--- 300
L N+++ S K P+I T+T +++ F + G +EA IF G+ P ++ YNAL
Sbjct: 254 DLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNG 313
Query: 301 -------MEAYRLISRM--HMGCEPDRASYNIMVDAYGRAG 332
++AY L+ M + C PDR S++I++ A RAG
Sbjct: 314 HCKEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAG 354
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 60/255 (23%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT T++ ++ C G + +A VF MR G P+ YNS I GL G ++A+++
Sbjct: 196 PTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDL 255
Query: 212 FQRMKRDCCQ-PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
++K Q P T+T++++ + K ++ A +F++ + P I TY AL+N
Sbjct: 256 LNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHC 315
Query: 271 REG-----------LCEEAE-------------------------EIFEQLQGAGIEPDV 294
+EG +C A + +++++ AG E D
Sbjct: 316 KEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKRMERAGFEADG 375
Query: 295 YAYNALMEAY-------------------RLISRMHMGCEPDRASYNIMVDAYGRAGLHE 335
A + L +L++ H EP +Y +M A R G +
Sbjct: 376 RALDTLARGLCRQCAANVAALADAREVFGKLVASGH---EPVSYTYCLMAQALARGGEVD 432
Query: 336 GKCSYSLVELSVKHY 350
S L E++ + Y
Sbjct: 433 AAVSL-LGEMARRGY 446
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
++ V++ ++RD + Y +++ A A+ LF +R + P+ +Y
Sbjct: 110 EERVKVLDLLQRDDGALTVSDYNDILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATA 169
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGC 314
V R+G +EA+E +++ G P V ++A++ A + M +GC
Sbjct: 170 VQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGC 229
Query: 315 EPDRASYNIMV 325
EP +YN ++
Sbjct: 230 EPTIRTYNSLI 240
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 41/189 (21%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ ++L +C G ++A +F + + GL P+ YN+ ++G K GNP KA + M
Sbjct: 271 TFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEGNPLKAYSLLMEM 330
Query: 216 -KRDCCQPSTETYTLMINLY---GKASKSFMALK-------------------------- 245
C P ++++++ G+ S ++ A K
Sbjct: 331 CGNAACPPDRISFSIVLQALLRAGETSAAWQAYKRMERAGFEADGRALDTLARGLCRQCA 390
Query: 246 -----------LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
+F ++ + +P TY + A AR G + A + ++ G
Sbjct: 391 ANVAALADAREVFGKLVASGHEPVSYTYCLMAQALARGGEVDAAVSLLGEMARRGYALRK 450
Query: 295 YAYNALMEA 303
AY ++ A
Sbjct: 451 RAYTDVVRA 459
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 5/160 (3%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK----- 201
++ C P +++++L+A +G A ++ M + G ++ GL +
Sbjct: 333 NAACPPDRISFSIVLQALLRAGETSAAWQAYKRMERAGFEADGRALDTLARGLCRQCAAN 392
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A E+F ++ +P + TY LM + + A+ L EM
Sbjct: 393 VAALADAREVFGKLVASGHEPVSYTYCLMAQALARGGEVDAAVSLLGEMARRGYALRKRA 452
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
YT +V A G +A + + P A++AL+
Sbjct: 453 YTDVVRALCERGRARDALRVLALVIARDFVPGRNAFDALL 492
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T+ LL +C + A +F +M G P+ V+YN+ IDGL K A+++
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
RM++D P TY +I+ + + A ++ + M + P++ T+ AL++A +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
EG EAEE +E++ ++PD+ Y+ L+ + SR+ GC PD +
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 321 YNIMVDAYGRA 331
Y+I+++ Y ++
Sbjct: 329 YSILINGYCKS 339
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L+ A G + +AE + EM + L P V Y+ I GL +A E+
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M C P TY+++IN Y K+ K +KLF EM N TYT L+ + R
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
G AEEIF ++ G+ P++ YN L+ +A +++ M G + D +
Sbjct: 374 AGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433
Query: 321 YNIMVDAYGRAG 332
YNI++ +AG
Sbjct: 434 YNIIIRGMCKAG 445
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 26/271 (9%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKW-DPIVLMSCVSI-----------LLIEAYGQKSL 134
D + P T++ LI+ L + +W D ++SC++ LI+A ++
Sbjct: 215 DGIGPDVVTYNSLIS---GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 135 HKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNS 194
+AE Y E++ P TY+LL+ CM L++AE +F M G P V Y+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I+G K + +++F M + +T TYT++I Y +A K +A ++F M
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 255 CKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAY 304
PNI TY L++ G E+A I +Q G++ D+ YN ++ +A+
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 305 RLISRMH-MGCEPDRASYNIMVDAYGRAGLH 334
+ ++ G PD +Y M+ + GL
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + + + E+ + TY +L++ YC +G L AE +FR M
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ + YN + GL G +KA+ I M+++ TY ++I KA + A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
++ + P+I TYT ++ ++GL EA+ +F +++ GI P+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +LL +C L A + +M K G PS V + S ++G +G A+ +F +M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+P+ Y +I+ K+ + AL L N M P++ TY +L++ G
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+A + + I PDV+ +NAL++A
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDA 265
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ R +P+ ++ LL A + ++ +M+ G+P + N ++ +
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+ +M + +PS T+ ++N + + + + AL +F++M KPN+
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y +++ + + A ++ +++ GI PDV YN+L+ +A R++S M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 311 HMGCEPDRASYNIMVDAYGRAG 332
PD ++N ++DA + G
Sbjct: 249 KREIYPDVFTFNALIDACVKEG 270
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++ D+ C+P TY L+ + L +A + REM + G PS V Y + GL + G
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 362
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM-RSHKCKPNICTY 262
+AVEI M C P+ TY+ +++ KA + AL F +M R P++ Y
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 422
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY----NALMEAYRLISRMHM------ 312
+AL++ + G +EA E E++ AG PDV + N L +A R+ + + +
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482
Query: 313 -GCEPDRASYNIMVDAYGRA 331
GC PD +Y +VD RA
Sbjct: 483 RGCVPDMVTYATLVDRLCRA 502
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 137 KAEFTYLELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREM--RKYGLPPSAVVYN 193
K F+ LE + + C P T+ L++K C G +E A V EM + GL P + +N
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212
Query: 194 SYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSH 253
S +DGL K A +F+R C+P+ TY+ +I+ K +K AL+L +M
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272
Query: 254 KCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EA 303
C+ N TY+ +V+ + G E+A + Q++ AG PD YN L+ EA
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332
Query: 304 YRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ M G P +Y + R+G
Sbjct: 333 VGLLREMLEAGFHPSVVTYTTLCHGLCRSG 362
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR-KY 183
LI+ G++ K+A + E C PT TY ++ C G +E A ++ +M +
Sbjct: 36 LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHF 95
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ V Y++ IDGL + K ++ + M C P+ TY ++N +S A
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQ--LQGAGIEPDVYAYNA-- 299
L +M ++ C P + T+ ++ +EG E A + ++ + +G+ PDV +N+
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215
Query: 300 --------LMEAYRLISR-MHMGCEPDRASYNIMVDAYGR 330
+++A+ + R + GC P+ +Y+ ++D +
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSK 255
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + +A ++++ C TY+ ++ G +E A V R+MR G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P AV YN+ IDG K ++AV + + M PS TYT + + ++ + A+
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL-QGAGIEPDVYAYNALM-- 301
++ + M + C PN TY+++V+ + G EA FE++ + + P V AY+AL+
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
EAY + RM G PD +++I+++ AG
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 468
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
KA + +++D P TY L+ +++A +F E R G P+ V YN+ I
Sbjct: 13 KAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI 72
Query: 197 DGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
DGL K G + A+ ++ M +P+ TY+ +I+ + + KL EM C
Sbjct: 73 DGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGC 132
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYR 305
PN TY LVNA +G +EA + EQ+ G P++ + +++ A+R
Sbjct: 133 APNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFR 192
Query: 306 LISRMHM---GCEPDRASYNIMVDA 327
++ M M G PD ++N ++D
Sbjct: 193 VVDEMFMIESGLSPDVITFNSVLDG 217
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
C P TY+ ++ C +G + +A F +M R + P + Y++ IDGL K G +A
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
E +RM R P T++++IN A + L+LF M C P++ TY LV+
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDR 498
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPD 293
R +EA ++F+Q++ G+ PD
Sbjct: 499 LCRASRVDEAFDLFQQMRSDGLSPD 523
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + ++ ++A E+L++ P+ TY L C SG ++A + M G
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMA 243
P+A+ Y+S +DGL K G +A+ F++M RD P Y+ +I+ KA K A
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ M P++ T++ L+N G + E+F + G PD+ Y L+
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDR 498
Query: 302 --------EAYRLISRMHM-GCEPDRASYNIMV 325
EA+ L +M G PDR++ M+
Sbjct: 499 LCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ C S ++KA +F++M + P V Y + IDGL K ++A ++F+ +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSH-KCKPNICTYTALVNAFAREGLCEEA 278
C P+ TY MI+ K + AL L+++M H +P + TY+ L++ R+ ++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 279 EEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMVDA 327
++ E++ G G P+ YN L+ EA+ L+ +M GC P+ ++ +++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 328 YGRAG 332
+ G
Sbjct: 181 LCKEG 185
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+++S P T+ +L C + A VF+ + G P+ V Y++ IDGL K
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 258
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
+A+++ +M C+ +T TY+ +++ K + A+ + +MR C P+ TY
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-G 313
L++ F + EA + ++ AG P V Y L EA ++ M G
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 314 CEPDRASYNIMVDAYGRAG 332
C P+ +Y+ +VD +AG
Sbjct: 379 CAPNAITYSSIVDGLCKAG 397
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%)
Query: 147 DSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQ 206
D P Y+ L+ C +G +++A M + G P V ++ I+GL G
Sbjct: 412 DEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 471
Query: 207 KAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
+E+F+ M C P TY +++ +AS+ A LF +MRS P+ T ++
Sbjct: 472 TGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531
Query: 267 NAFAREGLCEEAEEIFEQ 284
+ E+A+ I ++
Sbjct: 532 HGLLEVNRDEDAKRIQDE 549
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 22/270 (8%)
Query: 87 DSLPPTHATWDDLINVSVQLRLNKKWDPIVL-MSCVSIL--------LIEAYGQKSLHKK 137
D P H T+ LI+ +LR I+ MSC+ I +I +G+ + ++
Sbjct: 193 DCKPDVH-TYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFGKAKMFEQ 251
Query: 138 AEFTYLELLDS-RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
E LE+++S C P T+ ++AY S +EK E ++E + G+ P YNS I
Sbjct: 252 MESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMI 311
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
K G K + M++ P+ T +I+ +G+A + F M+ K
Sbjct: 312 SSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMK 371
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-MG-- 313
PN TY +LVNA+ + G E+ + I Q++ + + PD +N L+ Y + MG
Sbjct: 372 PNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGEL 431
Query: 314 --------CEPDRASYNIMVDAYGRAGLHE 335
C PD ++ M+ A G+ E
Sbjct: 432 FLEMKENKCVPDGITFATMIRALKAQGMTE 461
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 87 DSLPPTHATWDDLINV---SVQLRLNKKW-DPIVLMSCVSIL-----LIEAYGQKSLHKK 137
DS PP T++ I S Q+ +KW LM + +I +YG+ ++ K
Sbjct: 263 DSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDK 322
Query: 138 AEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+ + L ++ R PT T ++ ++ +G +E+ E F+ M+ G+ P++V Y S +
Sbjct: 323 MK-SVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLV 381
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+ K G+ +K I ++++ P T + +IN+YG+A +LF EM+ +KC
Sbjct: 382 NAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCV 441
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQL 285
P+ T+ ++ A +G+ E+A+ + +L
Sbjct: 442 PDGITFATMIRALKAQGMTEDAQRLENKL 470
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL E+A +F M GL PS VY + + + G KA+
Sbjct: 125 PRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAIST 184
Query: 212 FQRMKR-DCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
MK C+P TY+++I+ + + + K+ +M N TY ++N F
Sbjct: 185 VDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFG 244
Query: 271 REGLCEEAEE-IFEQLQGAGIEPDVYAYNALMEAY---RLISRMH--------MGCEPDR 318
+ + E+ E + E ++ PD+ +N + AY I +M MG EPD
Sbjct: 245 KAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDI 304
Query: 319 ASYNIMVDAYGRAGLHE 335
+YN M+ +YG+AG+++
Sbjct: 305 WTYNSMISSYGKAGMYD 321
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLD-SRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+ AYGQ L KA T E+ S C P TY++L+ + + + +M
Sbjct: 168 LVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCL 227
Query: 184 GLPPSAVVYNSYIDGLLKGGN-PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ + V YN+ I+G K Q + + ++ D C P T+ I YG + +
Sbjct: 228 GITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEK 287
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
K + E + +P+I TY ++++++ + G+ ++ + + ++ P + N +++
Sbjct: 288 MEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIID 347
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
++ + G +P+ +Y +V+AYG++G
Sbjct: 348 SFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSG 388
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 181 RKYG-LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCC-QPSTETYTLMINLYGKAS 238
+KY L P AV+ +D ++ + A++IF +++ +P +TYT ++ L GK
Sbjct: 84 KKYNNLWPKAVL--EALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCK 141
Query: 239 KSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG-AGIEPDVYAY 297
+ A LF M S KP+I YTALV+A+ + GL +A ++++ + +PDV+ Y
Sbjct: 142 QPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTY 201
Query: 298 NALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
+ L++ + R +G + +YN +++ +G+A + E
Sbjct: 202 SILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFGKAKMFE 250
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL+A C SG ++ A AV REM +P + +YN IDG + G+ +A ++ ++MK
Sbjct: 630 YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK 689
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D P+ TYT IN KA A K+ EM KPN+ TYT L+ +AR L +
Sbjct: 690 EDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 749
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
A + FE+++ AG++PD +Y+ L+ + L+SR
Sbjct: 750 RALKCFEEMKLAGLKPDEASYHCLVTS--LLSR 780
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ ++ A+C SG +E+AE + REM + G+ VY+S + G N K + +F+R+K
Sbjct: 350 YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 409
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+PS +Y ++NLY K K AL + EM S K N TY+ L+N F
Sbjct: 410 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 469
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMV 325
A IFE++ +G++PD YN L+EA+ + M +P ++ ++
Sbjct: 470 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 529
Query: 326 DAYGRAG 332
+ Y AG
Sbjct: 530 EGYAVAG 536
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A A+F EM + GL P +YN I+ K GN +A+ I ++M
Sbjct: 454 TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 513
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ QPS + +I Y A AL + MR C P + TY AL++ R+
Sbjct: 514 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 573
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ A + +++ AGI P+ + Y +M Y
Sbjct: 574 QRAVSVLDKMSIAGITPNEHTYTIIMRGY 602
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY ++++ Y SG + KA F ++++ GL +Y + + K G Q A+ +
Sbjct: 590 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 649
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +T Y ++I+ + + + A L +M+ PNI TYT+ +NA +
Sbjct: 650 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 709
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS----------RMHM-GCEPDRAS 320
G + AE++ E++ G++P+V Y L++ + +S M + G +PD AS
Sbjct: 710 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 769
Query: 321 YNIMVDA-YGRAGLHEGKCSYSLVEL 345
Y+ +V + RA + EG ++ +
Sbjct: 770 YHCLVTSLLSRATVMEGSTYTGIISV 795
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L S P Y LL++A+C G +++A + +M+K + PS + I+G
Sbjct: 475 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 534
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A++ M+R C P+ TY +I+ + K A+ + ++M PN T
Sbjct: 535 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 594
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS- 320
YT ++ +A G +A E F +++ +G++ DVY Y L+ A RM R
Sbjct: 595 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 654
Query: 321 ----------YNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 655 FQKIPRNTFIYNILIDGWARRG 676
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLIEA+ + +A ++ R P+ + +++ Y ++G ++ A MR+
Sbjct: 492 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 551
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKA 237
G P+ + YN+ I GL++ Q+AV + +M P+ TYT+++ Y GKA
Sbjct: 552 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 611
Query: 238 SKSFM-----------------------------ALKLFNEMRSHKCKPNICTYTALVNA 268
+ F AL + EM K N Y L++
Sbjct: 612 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 671
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPD 317
+AR G EAE++ +Q++ G+ P+++ Y + + A ++I M +G +P+
Sbjct: 672 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 731
Query: 318 RASYNIMVDAYGRAGL 333
+Y ++ + R L
Sbjct: 732 VKTYTTLIKGWARVSL 747
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++ Y G A A F MR G+ P+A V+ S + + + A+
Sbjct: 240 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 299
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MK + + + TY+++I+ + K + S A LF E ++ N Y+ +++A +
Sbjct: 300 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 359
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G E AEE+ +++ GI+ + Y+++M Y +I + G +P S
Sbjct: 360 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 419
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 420 YGCLLNLYVKIG 431
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q ++AE E+ + D Y ++ Y + K VF +++ G
Sbjct: 353 IIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECG 412
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS + Y ++ +K G KA+ I + M+ + + +TY+++IN + A
Sbjct: 413 FKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAF 472
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F EM +P+ Y L+ AF + G + A I E++Q ++P A+ ++E Y
Sbjct: 473 AIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGY 532
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGR 330
+ M GC P +YN ++ R
Sbjct: 533 AVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR 569
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + + A+ +F+E + + ++Y++ I + GN ++A E+ + M
Sbjct: 314 TYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREM 373
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ D + Y M++ Y L +F ++ KP+I +Y L+N + + G
Sbjct: 374 EEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKV 433
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+A I ++++ GI+ + Y+ L+ A+ + M G +PDRA YN++
Sbjct: 434 AKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLL 493
Query: 325 VDAYGRAG 332
++A+ + G
Sbjct: 494 IEAFCKMG 501
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +AE ++ + P TY + A C +G +++AE V EM
Sbjct: 667 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDV 726
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKAS 238
GL P+ Y + I G + P +A++ F+ MK +P +Y L+ +L +A+
Sbjct: 727 GLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 782
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+ + PS + LMI Y K A F MR+ +PN +T
Sbjct: 226 NWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 281
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+LV+A+A A E+++ G+E + Y+ L+ + I+
Sbjct: 282 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKIN 326
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++ Y + K AE E+ P E TY+LL+ AY +G E A V +EM
Sbjct: 316 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 375
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P++ V++ + G G QK ++ + MK +P + Y ++I+ +GK + A+
Sbjct: 376 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 435
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F+ M S +P+ T+ L++ + G AEE+FE ++ G P YN ++ +Y
Sbjct: 436 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 495
Query: 305 ----------RLISRMH-MGCEPDRASYNIMVDAYGRAG 332
RL+ +M G P+ ++ +VD YG++G
Sbjct: 496 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 534
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y +++ + L+ A F M G+ P V +N+ ID K G A E+
Sbjct: 413 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 472
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+R C P TY +MIN YG + +L +M+S PN+ T+T LV+ + +
Sbjct: 473 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 532
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--RLISRMHM---------GCEPDRAS 320
G +A E E+++ G++P YNAL+ AY R +S + G +P +
Sbjct: 533 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 592
Query: 321 YNIMVDAYG 329
N +++A+G
Sbjct: 593 LNSLINAFG 601
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 19/225 (8%)
Query: 119 SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFR 178
+ VSI+ A ++L +A F EL S P Y LLK Y +G L+ AE++
Sbjct: 277 TLVSIISALADSGRTLEAEALFE--ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 334
Query: 179 EMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY---G 235
EM K G+ P Y+ ID + G + A + + M+ QP++ ++ ++ + G
Sbjct: 335 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 394
Query: 236 KASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY 295
+ K+F LK EM+S KP+ Y +++ F + + A F+++ GIEPD
Sbjct: 395 EWQKTFQVLK---EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 451
Query: 296 AYNALMEAY----RLISRMHM-------GCEPDRASYNIMVDAYG 329
+N L++ + R I M GC P +YNIM+++YG
Sbjct: 452 TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 496
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 17/193 (8%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T ++ A SG +AEA+F E+R+ G+ P YN+ + G +K G + A + M
Sbjct: 277 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 336
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
++ P TY+L+I+ Y A + A + EM + +PN ++ L+ F G
Sbjct: 337 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 396
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPDRASY 321
++ ++ ++++ G++PD YN +++ + R++S G EPDR ++
Sbjct: 397 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE---GIEPDRVTW 453
Query: 322 NIMVDAYGRAGLH 334
N ++D + + G H
Sbjct: 454 NTLIDCHCKHGRH 466
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + H AE + + C+P TY +++ +Y + + + +M+ G
Sbjct: 456 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 515
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V + + +D K G A+E + MK +PS+ Y +IN Y + S A+
Sbjct: 516 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 575
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
F M S KP++ +L+NAF + EA + + ++ G++PDV Y LM+A
Sbjct: 576 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 635
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
+ + GC+PDR + +++ A
Sbjct: 636 IRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 669
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 9/228 (3%)
Query: 87 DSLPPTHATWDDLINVSVQ----LRLNKKWDPIVLMSCVSI-----LLIEAYGQKSLHKK 137
+ + P TW+ LI+ + + + ++ + C+ ++I +YG +
Sbjct: 444 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 503
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
+ ++ +P T+ L+ Y SG A EM+ GL PS+ +YN+ I+
Sbjct: 504 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 563
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+ G ++AV F+ M D +PS +IN +G+ + A + M+ + KP
Sbjct: 564 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 623
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYR 305
++ TYT L+ A R ++ ++E++ +G +PD A + L A R
Sbjct: 624 DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 671
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
LL + T TY L+ A + +EKA + +MR+ G V Y+ I L +
Sbjct: 159 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 218
Query: 205 PQKA--VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTY 262
+ +++ ++RD + + +I + K+ AL+L ++ T
Sbjct: 219 IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATL 278
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMH- 311
++++A A G EAE +FE+L+ +GI+P AYNAL++ Y ++S M
Sbjct: 279 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 338
Query: 312 MGCEPDRASYNIMVDAYGRAGLHEG 336
G PD +Y++++DAY AG E
Sbjct: 339 RGVSPDEHTYSLLIDAYVNAGRWES 363
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
++ + SG KA + + GL S I L G +A +F+ +++
Sbjct: 246 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 305
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+P T Y ++ Y K A + +EM P+ TY+ L++A+ G E A
Sbjct: 306 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 365
Query: 280 EIFEQLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAY 328
+ ++++ ++P+ + ++ L+ +R L +G +PDR YN+++D +
Sbjct: 366 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 425
Query: 329 GR 330
G+
Sbjct: 426 GK 427
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A LF+EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L LN+ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A +F+++ G+ P+
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+ L PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W SL P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + +M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E ++M ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 99/183 (54%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI Y + + KA + + +P+ TY++++ +C +L A+ +F M+
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL P+ YN+ + L K + ++A +FQ MK C+P T ++ +MI+ KA A
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L N+M+ P+ TY++ +N ++ G EEA+ F+ + +GI PD + Y++L++
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476
Query: 304 YRL 306
+ L
Sbjct: 477 FGL 479
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 13/190 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y+ L+ +C G L++ +A+F EM + G+ P+ VVY+ I+G K G ++A + M
Sbjct: 82 VYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
QP TYT MI K ++ AL LF+ M +P+ TY L+N +EG
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCI 201
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMG---CEPDRASYN 322
+A +IFE + G +V +YN L+ EA +L S + EPD ++N
Sbjct: 202 GDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFN 261
Query: 323 IMVDAYGRAG 332
++ + G
Sbjct: 262 TVIQGLCKEG 271
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + K + + + E+L+ P Y+ L+ +C GL +A AV M + G
Sbjct: 86 LISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERG 145
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P Y I GL K G +KA+++F M +PST TY ++IN K A
Sbjct: 146 IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAF 205
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL--QGAGIEPDVYAYNALME 302
K+F M + + +Y L+ G +EA ++F L G +EPDV +N +++
Sbjct: 206 KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQ 265
Query: 303 AYRLISRMHMGCE-----PDRASY------NIMVDAYGRAGL 333
R+ E +R S+ +I++ Y ++G+
Sbjct: 266 GLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P +Y ++ C LEKA + EM P++ Y +DGL K G ++A+
Sbjct: 7 LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTYTALVNA 268
+ MKR + Y+ +I+ G SK + LF+EM PN+ Y+ L+N
Sbjct: 67 LLGEMKRKGLEVDVVVYSTLIS--GFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPD 317
F ++GL EA + + GI+PDVY Y ++ +A L M G EP
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184
Query: 318 RASYNIMVDAYGRAG 332
+YN++++ + G
Sbjct: 185 TVTYNVLINGLCKEG 199
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T +L+ Y SG+++KA +++ + K GL PS+ Y+ IDG K A +F RM
Sbjct: 294 TCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM 353
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K P+ Y ++ K S A +LF EM+ C+P+ ++ +++ + G
Sbjct: 354 KISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDI 413
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIM 324
A+E+ +Q G+ PD Y Y++ + + +M G PD Y+ +
Sbjct: 414 HSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSL 473
Query: 325 VDAYG 329
+ +G
Sbjct: 474 IKGFG 478
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 131 QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAV 190
+K L K + +E+ S C P TY +L+ C G +E+A + EM++ GL V
Sbjct: 23 EKRLEKAVDL-LVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVV 81
Query: 191 VYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEM 250
VY++ I G G + +F M P+ Y+ +IN + K A + + M
Sbjct: 82 VYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141
Query: 251 RSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--------- 301
+P++ TYT ++ ++G +A ++F+ + G EP YN L+
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCI 201
Query: 302 -EAYRLISRM-HMGCEPDRASYNIMV 325
+A+++ M G + SYN ++
Sbjct: 202 GDAFKIFETMLEKGKRLEVVSYNTLI 227
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 180 MRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASK 239
M++ + P V YN+ I+GL K +KAV++ M+ C+P++ TY ++++ K +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 240 SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNA 299
A++L EM+ + ++ Y+ L++ F +G + + +F+++ GI P+V Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 300 LM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
L+ EA ++ M G +PD +Y M+ + G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDG 164
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ +++ C G L+KA ++ M + G + + I +K G KA+E+
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++R+ + PS+ TY++MI+ + K A LF+ M+ P + Y L+ + +
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
E E+A +F++++ + EPD ++N +++ A L++ M MG PD +
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434
Query: 321 YNIMVDAYGRAG-LHEGKCSY 340
Y+ ++ + G + E K ++
Sbjct: 435 YSSFINRLSKLGQMEEAKGAF 455
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y L+ + C LE+A +F+EM++ P + +N IDG LK G+ A E+
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M++ P TY+ IN K + A F+ M + P+ Y +L+ F
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL 479
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
EE + Q+ G+ D+ N+++
Sbjct: 480 NDEIEEVINLLRQMADMGVILDLEITNSIL 509
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ KA TY E+LD +P TY ++ A C + ++KA V M K G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YNS + G G P++A+ ++M D +P TY +++ K + A
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
K+F+ M KP I TY L+ +A +G E + + + GI P+ Y ++ L+ AY
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384
Query: 305 R----------LISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY 340
+ S+M G PD +Y ++ ++G E Y
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P +Y ++ + G L+KA + EM G+ P+ V YNS I L K KA+
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAM 254
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
E+ M ++ P+ TY +++ Y + + A+ +M S +P++ TY +L++
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRL---ISRMH--------MGCEPDR 318
+ G C EA ++F+ + G++P++ Y L++ Y + MH G P+
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374
Query: 319 ASYNIMVDAYGRAG 332
++I++ AY + G
Sbjct: 375 YVFSILICAYAKQG 388
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI AY ++ +A + ++ P TY ++ C SG +E A F +M
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVE-IFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
L P +VYNS I L KA E I + + R C T + +I+ + K +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVIE 497
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
+ KLF+ M KPNI TY+ L++ + G +EA ++ + G++PD YN L+
Sbjct: 498 SEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 303 AYRLISRMH-----------MGCEPDRASYNIMV 325
Y ISRM G PD +YNI++
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++D R P Y L+ + C+ +KA+ + EM G+ + +NS ID K G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++ ++F M R +P+ TY+ +I+ Y A K A KL M S KP+ TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+N + + E+A +F +++ +G+ PD+ YN +++
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 58 IFPVLSPTAQQILRFVQREVDSNTIWDAFDSLPPTHATWDDLIN----VSVQLRLNKKWD 113
IF + IL + R + +TI+ F+S+ +H +I + +R+ K +
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPN 513
Query: 114 PIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKA 173
I + LI+ Y +A ++ P TY L+ YC +E A
Sbjct: 514 IITYST-----LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 174 EAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINL 233
+FREM G+ P + YN + GL + A E++ + Q TY ++++
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628
Query: 234 YGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
K + + AL++F + + T+ ++ A + G +EA+++F L G+ PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Query: 294 VYAYNALME 302
V Y+ + E
Sbjct: 689 VRTYSLMAE 697
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ C +G +A +F M K GL P Y + + G G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M R+ P+ ++++I Y K K A+ +F++MR P+ TY ++ +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
G E+A FEQ+ + P YN+L+ +A LI M G D
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 321 YNIMVDAYGRAG 332
+N ++D++ + G
Sbjct: 482 FNSIIDSHCKEG 493
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ YC++G +++A + M G+ P V YN+ I+G K + A+ +
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M+ P TY +++ + ++ A +L+ + + + TY +++ +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRAS 320
L +EA +F+ L ++ + +N ++ A + R G PD +
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 321 YNIMVD 326
Y++M +
Sbjct: 692 YSLMAE 697
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L++A +++ + A +L+L D+ P T+ +L+ +C + + A A+ M+
Sbjct: 245 LMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTE 303
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P V Y S+++ K G+ ++ E+ + M+ + C P+ TYT++++ GK+ + AL
Sbjct: 304 FTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEAL 363
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME-- 302
++ +M+ C P+ Y++L++ ++ G ++A EIFE + G+ DV YN ++
Sbjct: 364 GVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAA 423
Query: 303 --------AYRLISRMH----MGCEPDRASY 321
A RL+ RM C P+ +Y
Sbjct: 424 LHHSRDEMALRLLKRMEDEEGESCSPNVETY 454
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRK-YGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
T DT + +++ SG KA F EM K YG+ + NS +D L+K + + A E+
Sbjct: 202 TLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEV 261
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F ++ D +P T+ ++I+ + KA K A + + M+ + P++ TYT+ V A+ +
Sbjct: 262 FLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK 320
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRAS 320
EG E+ E+++ G P+V Y +M EA + +M GC PD
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 321 YNIMVDAYGRAG 332
Y+ ++ + G
Sbjct: 381 YSSLIHILSKTG 392
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+++ + G+ +A Y ++ + C+P Y+ L+ +G + A +F +M
Sbjct: 348 IVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ 407
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR---DCCQPSTETYTLMINLYGKASKS 240
G+ +VYN+ I L + A+ + +RM+ + C P+ ETY ++ + K
Sbjct: 408 GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM 467
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
+ L + M + ++ TY L+ G EEA FE+ G+ P
Sbjct: 468 KLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC--TYTALVNAFAREGLCEEAEE 280
S TY M+++ GK + +L NEM ++ + T + ++ A+ G +A +
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 281 IFEQLQGA-GIEPDVYAYNALME----------AYRLISRMHMGCEPDRASYNIMVDAYG 329
F +++ + G++ D A N+LM+ A+ + ++ +PD ++NI++ +
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFC 284
Query: 330 RA 331
+A
Sbjct: 285 KA 286
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + +K + S LEK+E +F EM + G+ P + + I + G P++AVE F++M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C+P T MI+ YG+A MAL L++ R+ K + + T++ L+ + G +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
I+E+++ G++P++ YN L+++ R + G P+ ++Y +V
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 326 DAYGRA 331
AYGRA
Sbjct: 358 RAYGRA 363
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI++ G+ +A+ Y +L+ + P TYA L++AY + + A A++REM++ G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLYGKASKSFMA 243
L + ++YN+ + G +A EIFQ MK + C P + T++ +I +Y + + A
Sbjct: 381 LSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
+MR +P + T+++ + + ++ F+Q+ GI PD
Sbjct: 441 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L++ Y +SG + ++ EM+ G+ P+ V+YN ID + + P +A I++ +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TY ++ YG+A AL ++ EM+ + Y L++ A G
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYV 401
Query: 276 EEAEEIFEQLQGAGI-EPDVYAYNALMEAY-----------RLISRMHMGCEPDRASYNI 323
+EA EIF+ ++ +PD + +++L+ Y L+ G EP
Sbjct: 402 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 324 MVDAYGRA 331
++ YG+A
Sbjct: 462 VIQCYGKA 469
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Q + K+A + ++ C P T A ++ AY +G ++ A +++ R
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
AV +++ I GN + I++ MK +P+ Y +I+ G+A + + A
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK 335
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++ ++ ++ PN TY ALV A+ R ++A I+ +++ G+ V YN L+
Sbjct: 336 IIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMC 395
Query: 302 -------EAYRLISRMH--MGCEPDRASYNIMVDAYGRAG 332
EA+ + M C+PD +++ ++ Y +G
Sbjct: 396 ADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVV-YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A V + + P V+ YN + K + +K+ ++F M +P T+T
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 215
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ + A++ F +M S C+P+ T A+++A+ R G + A ++++ +
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 290 IEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
D ++ L+ Y + +G +P+ YN ++D+ GRA
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA 328
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 9/169 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T++ L+ Y SG + +AEA +MR+ G P+ V S I K V
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVV 476
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F ++ P ++N+ + + KL + K KP + +V
Sbjct: 477 RTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIG-KLIGCV--EKAKPKL---GQVVKML 530
Query: 270 AREGLCEEA---EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
E CEE +E E + G + N L++ ++++ CE
Sbjct: 531 VEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACE 579
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 11/188 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PSAV YN+ ++G ++ G + + M
Sbjct: 120 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 179
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 180 ASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 239
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M G +PD+ +Y ++
Sbjct: 240 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 299
Query: 326 DAYGRAGL 333
D + G+
Sbjct: 300 DGCCKEGV 307
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQLRL---NKKWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L + + +L S V
Sbjct: 133 IRVAQSVFDAITKW----GLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVY 188
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A+ + E+L +P T+ L+ +C +G ++ A ++++M
Sbjct: 189 TYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 248
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M R +P TYT +I+ K
Sbjct: 249 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVL 308
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + + + + YTAL++ +EG +AE++ ++ G+ PD Y +
Sbjct: 309 VSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMI 368
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 369 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 24/301 (7%)
Query: 56 DGIFPV---LSPTAQQILRFVQREVDSNTIWDAFDS-LPPTHATWDDLINVSVQLR---- 107
+GIFP L+ +++ Q V N + +S P+ + I +V+L
Sbjct: 511 EGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 570
Query: 108 ----LNK-KWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLK 162
N+ K D I + +LI+ + K AE + E+L R +P+ TY L+
Sbjct: 571 GLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLID 630
Query: 163 AYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQP 222
YC G EK+ V M+ + PS + +N+ + GL K G + A + MK P
Sbjct: 631 GYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVP 690
Query: 223 STETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
T++++ + Y K+ AL ++ K N T + L+NA +EG E+AEEI
Sbjct: 691 DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750
Query: 283 EQLQGAGIEPDVYAYNALMEAYR-----LISRMHM------GCEPDRASYNIMVDAYGRA 331
+ G+ P+ YN +++ Y + +RM + G +PD +YN ++ +
Sbjct: 751 GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810
Query: 332 G 332
G
Sbjct: 811 G 811
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A ++ +KAE + +P E Y ++ Y G L A M K
Sbjct: 732 ILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ 791
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P + YN I + G+ + A + +MK PS ETY ++I YG+ +
Sbjct: 792 GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 851
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
L EM + PN+ +Y L+N + EA+ + ++ G+ P+V YN L+
Sbjct: 852 FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Query: 302 --------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+A+R M G E + +YN ++D G
Sbjct: 912 CCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNG 951
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 7/216 (3%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI YG+K K E+ D+ +P +Y L+ C L +A+ V R+M
Sbjct: 837 ILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 896
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+ +YN IDG G + A + M + + + TY +I+ K A
Sbjct: 897 GVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEA 956
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+ E+ KP++ TY +L++ + G + ++E+++ +GI+P + Y+ L+
Sbjct: 957 EDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISL 1016
Query: 302 ---EAYRLISRM--HMGCEPDRASYNIMVDAYGRAG 332
E L ++ M +PD YN ++ Y G
Sbjct: 1017 CTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHG 1052
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y L++ +C G +E AE +M+ G+ PS YN I G + K ++
Sbjct: 795 PDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDL 854
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ + P+ +Y +IN K SK A + +M PN+ Y L++
Sbjct: 855 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCS 914
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
+G E+A E++ GIE ++ YN L++ + ++ G +PD +
Sbjct: 915 KGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFT 974
Query: 321 YNIMVDAYGRAG 332
YN ++ Y AG
Sbjct: 975 YNSLISGYRFAG 986
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +TY +L+ Y +K + +EM G P+ V Y + I+ L KG +A +
Sbjct: 830 PSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 889
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ P+ Y ++I+ K A + EM + N+ TY L++ +
Sbjct: 890 KRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSM 949
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G EAE++ ++ G++PDV+ YN+L+ YR + G +P +
Sbjct: 950 NGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKT 1009
Query: 321 YNIMVDAYGRAGLH 334
Y++++ + G+
Sbjct: 1010 YHLLISLCTKEGIE 1023
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 22/276 (7%)
Query: 73 VQREVDSNTIWDAFDS--LPPTHATWDDLIN---------VSVQLRLNKKWDPIVLMSCV 121
V++ D+ ++D + L P+ T++ LI+ S ++R K D I
Sbjct: 600 VRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLIT 659
Query: 122 SILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
L++ + + + AE E+ D +P T+++L Y + + A V+
Sbjct: 660 FNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAV 719
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
GL +A + ++ L K G +KA EI R P+ Y MI+ Y +
Sbjct: 720 DSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLV 779
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A + M KP+ Y L+ F G E AE+ +++ G+ P V YN L+
Sbjct: 780 GARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILI 839
Query: 302 EAY----------RLISRMH-MGCEPDRASYNIMVD 326
Y L+ M G P+ SY +++
Sbjct: 840 GGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLIN 875
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 146 LDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNP 205
L S + + +Y LL S ++ +A +F +R G+ PS+ +D L+K
Sbjct: 474 LSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQF 533
Query: 206 QKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTAL 265
+ + +F + +PS Y I K S L+LFN M+ + P + Y L
Sbjct: 534 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVL 593
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GC 314
++ + ++AE++F+++ + P + YN L++ Y ++ RM
Sbjct: 594 IDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNI 653
Query: 315 EPDRASYNIMVDAYGRAGLHE 335
EP ++N ++ +AG+ E
Sbjct: 654 EPSLITFNTLLKGLFKAGMVE 674
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 41/185 (22%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ M+G L +AE + E+ + GL P YNS I G GN Q+ + +++ M
Sbjct: 939 TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEM 998
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG-- 273
K +P+ +TY L+I+L K + K+F EM +P++ Y +++ +A G
Sbjct: 999 KTSGIKPTLKTYHLLISLCTKEGIE-LTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDM 1054
Query: 274 ----------------------------------LCEEAEEIFEQLQGAGIEPDVYAYNA 299
LCE + ++++ +EP+ Y+
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE-VRSLIDEMKAREMEPEADTYDI 1113
Query: 300 LMEAY 304
+++ +
Sbjct: 1114 IVKGH 1118
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
Y +L Y + G ++KA + ++M + + YNS I G LK G + + M
Sbjct: 1040 VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 1099
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K +P +TY +++ + + A + EM+ ++C LV+ E
Sbjct: 1100 KAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRS 1159
Query: 276 EEAEEIFEQLQG 287
+EAE + ++ G
Sbjct: 1160 KEAENVISEMNG 1171
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 24/185 (12%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+ S PT TY LL+ + C +E + +F EM L P +VYN +
Sbjct: 995 YEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAV 1050
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ KA + ++M TY +I K K L +EM++ + +P T
Sbjct: 1051 HGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADT 1110
Query: 262 YTALVNAFAREGLCEEAEEI-----FEQLQGAGIEPDVYAYNALM----------EAYRL 306
Y +V +G CE + + + ++Q G+ DV + L+ EA +
Sbjct: 1111 YDIIV-----KGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENV 1165
Query: 307 ISRMH 311
IS M+
Sbjct: 1166 ISEMN 1170
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP T++++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI+ Q+ + PD+ YN L+ + LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q DS T W L P+ +++ L+N +++ L++ + +M +
Sbjct: 152 IRLAQSVFDSITKW----GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LB+ +P T+ L+ +C +G ++ A ++R+M
Sbjct: 208 THSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++ ++ M +P TYT +I+ K
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L +P TY L+ C G L++ + EM GL P + Y + IDG K
Sbjct: 264 YRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
YT ++N F ++G ++ +++Q G P+
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRXGYXPN 415
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L + M++ +P++ T++ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKG 290
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y + +K + S LEK+E +F EM + G+ P + + I + G P++AVE F++M
Sbjct: 253 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 312
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
C+P T MI+ YG+A MAL L++ R+ K + + T++ L+ + G +
Sbjct: 313 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 372
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
I+E+++ G++P++ YN L+++ R + G P+ ++Y +V
Sbjct: 373 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 432
Query: 326 DAYGRA 331
AYGRA
Sbjct: 433 RAYGRA 438
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI++ G+ +A+ Y +L+ + P TYA L++AY + + A A++REM++ G
Sbjct: 396 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 455
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR-DCCQPSTETYTLMINLY---GKASKS 240
L + ++YN+ + + +A EIFQ MK + C P + T++ +I +Y G+ SK+
Sbjct: 456 LSLTVILYNTLLSMCADNRHVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSKA 515
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
AL ++R +P + T+++ + + ++ F+Q+ GI PD
Sbjct: 516 EAALL---QIREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 565
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T++ L++ Y +SG + ++ EM+ G+ P+ V+YN ID + + P +A I++ +
Sbjct: 357 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 416
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+ TY ++ YG+A AL ++ EM+ + Y L++ A
Sbjct: 417 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRHV 476
Query: 276 EEAEEIFEQLQGAGI-EPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNI 323
+EA EIF+ ++ +PD + +++L+ Y R+ G EP
Sbjct: 477 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTS 536
Query: 324 MVDAYGRA 331
++ YG+A
Sbjct: 537 VIQCYGKA 544
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I Q + K+A + ++ C P T A ++ AY +G ++ A +++ R
Sbjct: 291 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 350
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
AV +++ I GN + I++ MK +P+ Y +I+ G+A + + A
Sbjct: 351 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK 410
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++ ++ ++ PN TY ALV A+ R ++A I+ +++ G+ V YN L+
Sbjct: 411 IIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMC 470
Query: 302 -------EAYRLISRMH--MGCEPDRASYNIMVDAYGRAG 332
EA+ + M C+PD +++ ++ Y +G
Sbjct: 471 ADNRHVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 510
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 171 EKAEAVFREMRKYGLPPSAVV-YNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A V + + P V+ YN + K + +K+ ++F M +P T+T
Sbjct: 231 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 290
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ + A++ F +M S C+P+ T A+++A+ R G + A ++++ +
Sbjct: 291 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 350
Query: 290 IEPDVYAYNALMEAY----------RLISRMH-MGCEPDRASYNIMVDAYGRA 331
D ++ L+ Y + M +G +P+ YN ++D+ GRA
Sbjct: 351 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA 403
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 9/169 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P T++ L+ Y SG + KAEA ++R+ G P+ V S I K V
Sbjct: 492 CDPDSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTSVIQCYGKAKQVDDVV 551
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
F ++ P ++N+ + + KL + K KP + +V
Sbjct: 552 RTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIG-KLIGCV--EKAKPKL---GQVVKML 605
Query: 270 AREGLCEEA---EEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
E CEE +E E + G + N L++ ++++ CE
Sbjct: 606 VEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACE 654
>gi|218189906|gb|EEC72333.1| hypothetical protein OsI_05540 [Oryza sativa Indica Group]
Length = 747
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LLI S+ A L+ + S I P E T A L+ AY + + +++ +FR M
Sbjct: 141 LLIPILASHSMLNHARCILLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRLMPD 200
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ +A+ YN+ + +L G A I+ M D P TY +I +G K
Sbjct: 201 LGIARTALSYNAVLKAILCRGREAMARRIYNAMIADAVTPDLSTYNTLIWGFGLCKKMEA 260
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
AL++F +M+ H P++ TY L+NA+ R G E A ++F+++ GAG + +YN +++
Sbjct: 261 ALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIK 320
Query: 303 AY 304
Y
Sbjct: 321 GY 322
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI AYG+ ++ +++ + + D T +Y +LKA G A ++ M
Sbjct: 178 LIAAYGKANIPQESVKLFRLMPDLGIARTALSYNAVLKAILCRGREAMARRIYNAMIADA 237
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P YN+ I G + A+ +F MK P TY ++N + +A A
Sbjct: 238 VTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESAR 297
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+F+EM N +Y ++ + G EEA +F ++ G+ + ALM
Sbjct: 298 KVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEKTFAALM 354
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G KAE FR++ K G+ A +NS I G K G P+ A EI M
Sbjct: 465 YNPVIEYLCSNGNTSKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEILAIMT 523
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R + E++ L+++ + K ++ A + M P+ + +++ A G +
Sbjct: 524 RRGVRTDPESHALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNGGRVQ 583
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRL-------ISRMHM----GCEPD 317
A + + + G+ ++ + ++EA + I R+++ GC PD
Sbjct: 584 TASRVMKSMIEKGVTENMDMAHKILEALFMRGHVEEAIGRVNLMVENGCLPD 635
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P T +I YGKA+ ++KLF M +Y A++ A G A I
Sbjct: 170 PEEATVAALIAAYGKANIPQESVKLFRLMPDLGIARTALSYNAVLKAILCRGREAMARRI 229
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIMVDAYGR 330
+ + + PD+ YN L+ + L +M G PD +YN +++A+ R
Sbjct: 230 YNAMIADAVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDVTTYNTLLNAWVR 289
Query: 331 AG 332
AG
Sbjct: 290 AG 291
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+ L PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W SL P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|224075802|ref|XP_002304774.1| predicted protein [Populus trichocarpa]
gi|222842206|gb|EEE79753.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PTE + +L++ + + + V+++M K+G+ P +YN +D L+K G+ A+ +
Sbjct: 193 PTEKQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSV 252
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ +RD + TY ++I KA + +++ MR + CKP++ YTA+V A A
Sbjct: 253 YEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAG 312
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEP-----------DRAS 320
EG + ++E+++ G+EPDV AY L+ A R+ G E DR
Sbjct: 313 EGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILIDRGI 372
Query: 321 YNIMVDAY---GRAGL 333
Y I+V+A+ G+ GL
Sbjct: 373 YGILVEAFVADGKIGL 388
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 10/233 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI + + + + Y +++ P Y ++ + +G L+ A +V+ + R+
Sbjct: 200 ILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRRD 259
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL +V Y I GL K G ++ +E+ RM+ + C+P YT M+
Sbjct: 260 GLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEGNLDAC 319
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L+++ EM+ +P++ Y LV A + G ++ E+F++++G I D Y L+EA
Sbjct: 320 LRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILIDRGIYGILVEA 379
Query: 304 YRLISRMHMGCEPDRASYNIMVDAYGRAGLH------EGKCSYSLVELSVKHY 350
+ ++ + C+ + +VD+ RA L EG C+ V+ + K +
Sbjct: 380 FVADGKIGLACDLLKD----LVDSGYRADLRIYNSLIEGFCNVKRVDKAHKLF 428
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++ + + G +++A ++ + PS Y S GL G A+ +
Sbjct: 541 PDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPSVAAYCSLAKGLCDNGEIDAAMML 600
Query: 212 FQRMKRDCCQ-----PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALV 266
RDC P Y+L I K + + + NEM C PN Y+A++
Sbjct: 601 V----RDCLASVESGPMEFKYSLTILHACKTGGAEKVIDVLNEMMQEGCTPNEVIYSAII 656
Query: 267 NAFAREGLCEEAEEIFEQLQGAGI 290
+ + G EEA ++F L+ I
Sbjct: 657 SGMCKHGTFEEARKVFTDLRQRKI 680
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 115 IVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCI------PTEDTYALLLKAYCMSG 168
IV M CV + K L E +L C+ P E Y+L + C +G
Sbjct: 569 IVEMFCVPSVAAYCSLAKGLCDNGEIDAAMMLVRDCLASVESGPMEFKYSLTILHACKTG 628
Query: 169 LLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR 217
EK V EM + G P+ V+Y++ I G+ K G ++A ++F +++
Sbjct: 629 GAEKVIDVLNEMMQEGCTPNEVIYSAIISGMCKHGTFEEARKVFTDLRQ 677
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/163 (18%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
++ G + YN++ L + + A ++ + M+ P+ + + ++I ++ A++
Sbjct: 152 KQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEAQGKPPTEKQFEILIRMHSDANRG 211
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
++ +M KP + Y ++++ + G + A ++E + G+ + Y L
Sbjct: 212 LRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRRDGLVEESVTYMIL 271
Query: 301 M----------EAYRLISRMHMG-CEPDRASYNIMVDAYGRAG 332
+ E ++ RM C+PD +Y MV A G
Sbjct: 272 IKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEG 314
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 19/212 (8%)
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ E+ R + Y +L++A+ G + A + +++ G +YNS I+G
Sbjct: 357 VFKEMKGRRILIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFC 416
Query: 201 KGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNIC 260
KA ++FQ ++ + +T ++ Y + K KL +M K
Sbjct: 417 NVKRVDKAHKLFQVTVQEGLERDFKTVNPLLMSYAEMKKMDDFCKLLKQME----KLGFS 472
Query: 261 TYTALVNAFA----REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-- 314
+ L F+ + A E+FE L+ G V YN LMEA I M
Sbjct: 473 VFDDLSKFFSYVVGKPERTMMALEVFEDLKVKGYS-SVPIYNILMEALLTIGEMKRALSL 531
Query: 315 --------EPDRASYNIMVDAYGRAGLHEGKC 338
+PD +Y+I + + G + C
Sbjct: 532 FGEMKDLNKPDSTTYSIAIICFVEDGNIQEAC 563
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFRE-MRKYGLPPSAVVYNS 194
++A ++ ++++ C+P+ Y L K C +G ++ A + R+ + P Y+
Sbjct: 560 QEACVSHNKIVEMFCVPSVAAYCSLAKGLCDNGEIDAAMMLVRDCLASVESGPMEFKYSL 619
Query: 195 YIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHK 254
I K G +K +++ M ++ C P+ Y+ +I+ K A K+F ++R K
Sbjct: 620 TILHACKTGGAEKVIDVLNEMMQEGCTPNEVIYSAIISGMCKHGTFEEARKVFTDLRQRK 679
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A VF +++ G S +YN ++ LL G ++A+ +F MK D +P + TY++ I
Sbjct: 494 ALEVFEDLKVKGYS-SVPIYNILMEALLTIGEMKRALSLFGEMK-DLNKPDSTTYSIAII 551
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
+ + A N++ C P++ Y +L +GLC+ E
Sbjct: 552 CFVEDGNIQEACVSHNKIVEMFCVPSVAAYCSLA-----KGLCDNGE 593
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 89 LPPTHATWDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDS 148
+PP +++L V+ + W+P + +LI+AY + + +K T+ +++
Sbjct: 157 VPPNDGIYENL----VECTEDCNWNPAIFD-----MLIKAYVKAGMVEKGLATFRRNIEA 207
Query: 149 RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKA 208
IP LL + + AV+ EM + G+ +A +N L K G+ K
Sbjct: 208 CFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKV 267
Query: 209 VEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+M+ + +P TY ++N Y K + A L+ M PN+ T+T L+N
Sbjct: 268 TRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNG 327
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPD 317
EG +EA ++F Q+ GI+PDV +YN L+ Y +M M G PD
Sbjct: 328 LCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPD 387
Query: 318 RASYNIMVDAYGRAG 332
+ ++V+ + R G
Sbjct: 388 SVTCRLIVEGFARDG 402
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
E++ + P T L+++ + G L A E++++ + +Y+ I L G
Sbjct: 378 EMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEG 437
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
P A R+ +D P TY ++ K + AL L +EM N+ Y
Sbjct: 438 RPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYR 497
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
A+++ R EAE + E++ +GI PDV AL+ Y
Sbjct: 498 AVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGY 538
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++E + + A T +EL R ED Y L+ A C+ G A + + +
Sbjct: 393 LIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQD 452
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P YN ++ L K N ++A+ + M + + Y +I+ + +++ A
Sbjct: 453 GYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEA 512
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM S P++ AL+N + E ++A + + D +YNA+++
Sbjct: 513 EGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKV 572
Query: 304 Y 304
+
Sbjct: 573 F 573
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 98/260 (37%), Gaps = 37/260 (14%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ +Y +K + A + Y + +P T+ +L+ C G +++A +F +M G
Sbjct: 289 LVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRG 348
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN+ + G + G Q + M + P + T L++ + + K AL
Sbjct: 349 IDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSAL 408
Query: 245 KLFNEMRSHKCK-----------------------------------PNICTYTALVNAF 269
E++ + K P I TY LV +
Sbjct: 409 NTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESL 468
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--HMGCEPDRASYNIMVDA 327
+ EEA + ++ + ++ AY A++ ++R G + S I+ D
Sbjct: 469 CKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDV 528
Query: 328 YGRAGLHEGKCSYSLVELSV 347
L G C + V+ +V
Sbjct: 529 EISRALINGYCEENKVDKAV 548
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+ L PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W SL P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSV 416
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
Length = 701
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 15/223 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y Q + ++ + S P +A+L K + +G + + VF+EMR+ G
Sbjct: 252 ILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVG 311
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ VYN+ ++ L K G P A +F+ M + +P+ T T + +YG+A AL
Sbjct: 312 IKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDAL 371
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI----EPDVYAYNAL 300
+L+ +MR K + L++ A GL EAE++F +++ + +PD ++Y A+
Sbjct: 372 QLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAM 431
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ Y +L + M G EP+ SY I++ G+AG
Sbjct: 432 INIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAG 474
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EA G+ A + E+ P T L K Y + A ++ +MR+
Sbjct: 322 LLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKK 381
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR----DCCQPSTETYTLMINLYGKASKS 240
LP ++ N+ + G +A ++F MK D +P +YT MIN+YG + +
Sbjct: 382 LPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDA 441
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
AL+LF EM +PNI +YT ++ + G +EA ++ E G++PD
Sbjct: 442 DRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 494
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSY 195
+AE L++L S TY+ L+ A +KA F M G+ P V Y++
Sbjct: 193 QAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAI 252
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D + G ++ + +F R + +P + ++ ++G+A +F EMR
Sbjct: 253 LDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGI 312
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KPNI Y AL+ A + G A +FE++ G+EP+ AL + Y
Sbjct: 313 KPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIY 361
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
K+AE E+L R E TY +L+ YC G + +A V M + G+ P+ V Y +
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
DGL K G+ Q A E+ M + + TY +IN KA A++ +M +
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMG-- 313
KP++ TYT L++A + G + A ++ +++ GI+P + YN LM + + R+ G
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595
Query: 314 ---------CEPDRASYNIMVDAY 328
P+ +YN ++ Y
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQY 619
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
+++ + I E Y +L +C G L A F EM++ GL V Y + I+GL + G
Sbjct: 354 DMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAG 413
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
++A ++ Q M TYT++++ Y K K A ++ N M PN+ TYT
Sbjct: 414 ELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYT 473
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-M 312
AL + ++G + A E+ ++ G+E + YN+L+ +A R ++ M
Sbjct: 474 ALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAA 533
Query: 313 GCEPDRASYNIMVDAYGRAG 332
G +PD +Y ++DA ++G
Sbjct: 534 GLKPDVYTYTTLIDALCKSG 553
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L++ Y ++ +A + ++ P TY L C G ++ A + EM
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL +A YNS I+GL K G +A+ M +P TYT +I+ K+ + A
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L EM + KP I TY L+N F G E +++ E + I P+ YN+LM+
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAYGRA 331
Y + + M EP+ +YNI++ + +A
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKA 657
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A + +A E+LD+ PT TY +L+ +CMSG +E + + M +
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+A YNS + G N + EI++ M +P+ TY ++I + KA A
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI--EPDVYAY 297
NEM + +Y+AL+ ++ EA ++F ++ G EPDVY +
Sbjct: 665 YFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ YC G LE A + +M G+ P+A VY S + L G A+ +
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M YT +++ + A + F+EM+ + TYT L+N R
Sbjct: 352 VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G +EAE++ +++ ++ D Y L++ Y +M G P+ +
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471
Query: 321 YNIMVDAYGRAG 332
Y + D + G
Sbjct: 472 YTALSDGLCKQG 483
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY L+ A C SG L++A + +EM G+ P+ V YN ++G G + ++
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M P+ TY ++ Y + +++ M S +PN TY L+ +
Sbjct: 597 LEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH---MGCEPDR 318
+EA+ ++ G +Y+AL+ EA +L M EPD
Sbjct: 657 ARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPD- 715
Query: 319 ASYNIMVD 326
YN +D
Sbjct: 716 -VYNFYID 722
>gi|115456691|ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|41393252|gb|AAS01975.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|222626198|gb|EEE60330.1| hypothetical protein OsJ_13428 [Oryza sativa Japonica Group]
Length = 640
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 15/223 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y Q + ++ + S P +A+L K + +G + + VF+EMR+ G
Sbjct: 189 ILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVG 248
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ VYN+ ++ L K G P A +F+ M + +P+ T T + +YG+A AL
Sbjct: 249 IKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDAL 308
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI----EPDVYAYNAL 300
+L+ +MR K + L++ A GL EAE++F +++ + +PD ++Y A+
Sbjct: 309 QLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAM 368
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ Y +L + M G EP+ SY I++ G+AG
Sbjct: 369 INIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAG 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EA G+ A + E+ P T L K Y + A ++ +MR+
Sbjct: 259 LLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKK 318
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR----DCCQPSTETYTLMINLYGKASKS 240
LP ++ N+ + G +A ++F MK D +P +YT MIN+YG + +
Sbjct: 319 LPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDA 378
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
AL+LF EM +PNI +YT ++ + G +EA ++ E G++PD
Sbjct: 379 DRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 431
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSY 195
+AE L++L S TY+ L+ A +KA F M G+ P V Y++
Sbjct: 130 QAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAI 189
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D + G ++ + +F R + +P + ++ ++G+A +F EMR
Sbjct: 190 LDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGI 249
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KPNI Y AL+ A + G A +FE++ G+EP+ AL + Y
Sbjct: 250 KPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIY 298
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T LL +C ++A ++ M + GL P+ V+YN+ I+GL K + A+EI
Sbjct: 683 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEI 742
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M++ TY +I+ + + A +L +M K PN+ +TAL++ F +
Sbjct: 743 FYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 802
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM----HM-------GCEPDRAS 320
EG EA+ +++++ + P++ YN+L+ + + R+ HM GC PD +
Sbjct: 803 EGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVT 862
Query: 321 YNIMVDAYGRA 331
YN ++ + ++
Sbjct: 863 YNTLITGFCKS 873
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY LL C SG +A + R+M K + P + + ID +K GN +A E++++M
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ P+T TY +IN + + A K F+ M S C PN+ TY L+N F +
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRASYNIM 324
E+ ++F+++ G+ D + YN L+ Y + ++ + G PD ++ I+
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387
Query: 325 V 325
+
Sbjct: 388 L 388
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ T+ LL +C+ + A ++ M K G P+ VVYN+ ID L K G+ A+E+
Sbjct: 133 PSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALEL 192
Query: 212 FQRM-KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
M K+ TY ++ + + A ++ +M + P++ T+TAL++AF
Sbjct: 193 LNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFV 252
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRA 319
++G +EA+E+++Q+ + I P+ YN+L+ + R++ GC P+
Sbjct: 253 KQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVV 312
Query: 320 SYNIMVDAYGRA 331
+YN +++ + ++
Sbjct: 313 TYNTLINGFCKS 324
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y ++ C + L A +F M K G+ AV YN+ I GL G A +
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M + P+ +T +I+ + K A L+ EM PNI TY +L+N F
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HMGCEPDRAS 320
+G +A+ +F+ + G PDV YN L+ + +L M H G D +
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 321 YNIMVDAYGRAG 332
YN ++ Y +AG
Sbjct: 898 YNTLIHGYCQAG 909
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+A+ ++ +A+ Y ++L S P TY L+ CM G L A+ F M G
Sbjct: 247 LIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P+ V YN+ I+G K + +++FQRM R+ T TY +I+ Y + K +A
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+F+ M S P+I T+ L++ G A F ++ + AYN ++
Sbjct: 367 DIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL 426
Query: 302 -------EAYRLISRMHM-GCEPDRASYNIMVDAYGRAG 332
EA+ L R+ + G +PD +Y IM+ + G
Sbjct: 427 CKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG 465
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
+ +K DP V+ LI+ + ++ +A+ Y E++ P TY L+ +C+
Sbjct: 782 VKRKIDPNVIFFTA---LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQ 838
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G L A+ +F M G P V YN+ I G K + +++F M TY
Sbjct: 839 GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTY 898
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG 287
+I+ Y +A K +A K+FN M P+I TY L++ G E+A + E LQ
Sbjct: 899 NTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 958
Query: 288 AGIEPDVYAYNALMEA-------------YRLISRMHMGCEPDRASYNIMVDAYGRAGL 333
++ D+ YN +++ +R ++R G + D +Y M+ R GL
Sbjct: 959 NQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTR--KGVKLDAIAYITMISGLCRNGL 1015
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG 203
++ R P T+ L+ A+ G L++A+ ++++M + + P+ V YNS I+GL G
Sbjct: 231 DMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHG 290
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
A + F M C P+ TY +IN + K+ + +KLF M + TY
Sbjct: 291 RLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYN 350
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L++ + + G A++IF + G+ PD+ + L+
Sbjct: 351 TLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHG 390
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 12/193 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P Y L+ C +G + A + EM K G L V YN+ + GL G ++A
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAAR 227
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
I + M + P T+T +I+ + K A +L+ +M PN TY +L+N
Sbjct: 228 ILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLC 287
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRMHM-GCEPDRA 319
G A++ F+ + G P+V YN L+ + +L RM+ G D
Sbjct: 288 MHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTF 347
Query: 320 SYNIMVDAYGRAG 332
+YN ++ Y + G
Sbjct: 348 TYNTLIHGYCQVG 360
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 66 AQQILR-FVQREVDSNTIW-----DAF------------------DSLPPTHATWDDLIN 101
A ++LR V+R++D N I+ D F S+ P T++ LIN
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 102 -VSVQLRLNKK---WDPIVLMSCVSIL-----LIEAYGQKSLHKKAEFTYLELLDSRCIP 152
+Q RL +D +V C + LI + + + + E+ +
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893
Query: 153 TEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIF 212
TY L+ YC +G L A+ VF M G+PP V YN +D L G +KA+ +
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953
Query: 213 QRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE 272
+ ++++ TY ++I + K A LF + K + Y +++ R
Sbjct: 954 EDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRN 1013
Query: 273 GLCEEAEEIFEQLQGAGIEPDVYAYN 298
GL EA+++ +++ G P Y+
Sbjct: 1014 GLRREADKLCTRMKEDGFMPSERIYD 1039
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ YC G L A+ +F M G+ P + + + GL G A+ F M
Sbjct: 348 TYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ Y +MI+ KA K A +LF + KP+ TYT ++ + G
Sbjct: 408 RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 467
Query: 276 EEAEEIFEQLQGAGI 290
EA+E+F +++ GI
Sbjct: 468 READELFRRMKEDGI 482
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 12/211 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L SR IP+ + +L A + +F +M G+ + I +
Sbjct: 603 FCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCR 662
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+ + +M + QPS T ++N + + ++ A+ L + M +PN+
Sbjct: 663 CSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVI 722
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM- 310
Y ++N + A EIF ++ GI D YN L+ +A RL+ M
Sbjct: 723 YNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782
Query: 311 HMGCEPDRASYNIMVDAYGRAG-LHEGKCSY 340
+P+ + ++D + + G L E K Y
Sbjct: 783 KRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
+ A +F EM + PS V + + + K + +F +M+ ++T+
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ + + S+ +AL L +M +P+I T +L+N F + +EA + + + G
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 290 IEPDVYAYNALMEA 303
+EP+V YN ++
Sbjct: 716 LEPNVVIYNTVING 729
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y Q + A+ + ++ P T+ +LL C++G + A F +MR
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE 411
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
V YN I GL K ++A E+F R+ + +P TYT+MI K A
Sbjct: 412 KYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 471
Query: 245 KLFNEMR 251
+LF M+
Sbjct: 472 ELFRRMK 478
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+LE++ S+ +P+ + LL A E ++M +G+ + I +
Sbjct: 53 FLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCR 112
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+ I +M + PS T+ +++ + ++ A L M +PN+
Sbjct: 113 CSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVV 172
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAG-IEPDVYAYNALM----------EAYRLISRM 310
Y L++ + G A E+ +++ G + D+ YN L+ +A R++ M
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM 232
Query: 311 -HMGCEPDRASYNIMVDAYGRAG 332
PD ++ ++DA+ + G
Sbjct: 233 TKRRINPDVFTFTALIDAFVKQG 255
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
E A +F EM + PS V + + + + + Q+M+ ++T+
Sbjct: 46 FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I+ + + S+ +AL + +M P+I T+ +L++ F +A + + +G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 290 IEPDVYAYNALME 302
EP+V YN L++
Sbjct: 166 YEPNVVVYNTLID 178
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ + G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A LF+EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L LN+ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G +P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSV 416
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + G +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A +F+++ G+ P+
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL+A C SG ++ A AV REM +P + +YN IDG + G+ +A ++ ++MK
Sbjct: 651 YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK 710
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D P+ TYT IN KA A K+ EM KPN+ TYT L+ +AR L +
Sbjct: 711 EDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 770
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
A + FE+++ AG++PD +Y+ L+ + L+SR
Sbjct: 771 RALKCFEEMKLAGLKPDEASYHCLVTS--LLSR 801
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A A+F EM + GL P +YN I+ K GN +A+ I ++M
Sbjct: 475 TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 534
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ QPS + +I Y A AL + MR C P + TY AL++ R+
Sbjct: 535 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 594
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ A + +++ AGI P+ + Y +M Y
Sbjct: 595 QRAVSVLDKMSIAGITPNEHTYTIIMRGY 623
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY ++++ Y SG + KA F ++++ GL +Y + + K G Q A+ +
Sbjct: 611 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 670
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +T Y ++I+ + + + A L +M+ PNI TYT+ +NA +
Sbjct: 671 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 730
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS----------RMHM-GCEPDRAS 320
G + AE++ E++ G++P+V Y L++ + +S M + G +PD AS
Sbjct: 731 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 790
Query: 321 YNIMVDA-YGRAGLHEGKCSYSLVEL 345
Y+ +V + RA + EG ++ +
Sbjct: 791 YHCLVTSLLSRATVMEGSTYTGIISV 816
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L S P Y LL++A+C G +++A + +M+K + PS + I+G
Sbjct: 496 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 555
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A++ M+R C P+ TY +I+ + K A+ + ++M PN T
Sbjct: 556 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 615
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS- 320
YT ++ +A G +A E F +++ +G++ DVY Y L+ A RM R
Sbjct: 616 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 675
Query: 321 ----------YNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 676 FQKIPRNTFIYNILIDGWARRG 697
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ ++ A+C SG +E+AE + EM + G+ VY+S + G N K + +F+R+K
Sbjct: 371 YSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 430
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+PS +Y ++NLY K K AL + EM S K N TY+ L+N F
Sbjct: 431 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 490
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMV 325
A IFE++ +G++PD YN L+EA+ + M +P ++ ++
Sbjct: 491 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 550
Query: 326 DAYGRAG 332
+ Y AG
Sbjct: 551 EGYAVAG 557
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLIEA+ + +A ++ R P+ + +++ Y ++G ++ A MR+
Sbjct: 513 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 572
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKA 237
G P+ + YN+ I GL++ Q+AV + +M P+ TYT+++ Y GKA
Sbjct: 573 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 632
Query: 238 SKSFM-----------------------------ALKLFNEMRSHKCKPNICTYTALVNA 268
+ F AL + EM K N Y L++
Sbjct: 633 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 692
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPD 317
+AR G EAE++ +Q++ G+ P+++ Y + + A ++I M +G +P+
Sbjct: 693 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 752
Query: 318 RASYNIMVDAYGRAGL 333
+Y ++ + R L
Sbjct: 753 VKTYTTLIKGWARVSL 768
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++ Y G A A F MR G+ P+A V+ S + + + A+
Sbjct: 261 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 320
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MK + + + TY+++I+ + K + S A LF E ++ N Y+ +++A +
Sbjct: 321 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 380
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G E AEE+ +++ GI+ + Y+++M Y +I + G +P S
Sbjct: 381 SGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 440
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 441 YGCLLNLYVKIG 452
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q ++AE E+ + D Y ++ Y + K VF +++ G
Sbjct: 374 IIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECG 433
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS + Y ++ +K G KA+ I + M+ + + +TY+++IN + A
Sbjct: 434 FKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAF 493
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F EM +P+ Y L+ AF + G + A I E++Q ++P A+ ++E Y
Sbjct: 494 AIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGY 553
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGR 330
+ M GC P +YN ++ R
Sbjct: 554 AVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR 590
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + + A+ +F+E + + ++Y++ I + GN ++A E+ M
Sbjct: 335 TYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEM 394
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ D + Y M++ Y L +F ++ KP+I +Y L+N + + G
Sbjct: 395 EEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKV 454
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+A I ++++ GI+ + Y+ L+ A+ + M G +PDRA YN++
Sbjct: 455 AKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLL 514
Query: 325 VDAYGRAG 332
++A+ + G
Sbjct: 515 IEAFCKMG 522
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +AE ++ + P TY + A C +G +++AE V EM
Sbjct: 688 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDV 747
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKAS 238
GL P+ Y + I G + P +A++ F+ MK +P +Y L+ +L +A+
Sbjct: 748 GLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 803
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+ + PS + LMI Y K A F MR+ +PN +T
Sbjct: 247 NWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 302
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+LV+A+A A E+++ G+E + Y+ L+ + I+
Sbjct: 303 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKIN 347
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL+A C SG ++ A AV REM +P + +YN IDG + G+ +A ++ ++MK
Sbjct: 656 YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK 715
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D P+ TYT IN KA A K+ EM KPN+ TYT L+ +AR L +
Sbjct: 716 EDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 775
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
A + FE+++ AG++PD +Y+ L+ + L+SR
Sbjct: 776 RALKCFEEMKLAGLKPDEASYHCLVTS--LLSR 806
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A A+F EM + GL P +YN I+ K GN +A+ I ++M
Sbjct: 480 TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 539
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ QPS + +I Y A AL + MR C P + TY AL++ R+
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 599
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ A + +++ AGI P+ + Y +M Y
Sbjct: 600 QRAVSVLDKMSIAGITPNEHTYTIIMRGY 628
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY ++++ Y SG + KA F ++++ GL +Y + + K G Q A+ +
Sbjct: 616 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 675
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +T Y ++I+ + + + A L +M+ PNI TYT+ +NA +
Sbjct: 676 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 735
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS----------RMHM-GCEPDRAS 320
G + AE++ E++ G++P+V Y L++ + +S M + G +PD AS
Sbjct: 736 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 795
Query: 321 YNIMVDA-YGRAGLHEGKCSYSLVEL 345
Y+ +V + RA + EG ++ +
Sbjct: 796 YHCLVTSLLSRATVMEGSTYTGIISV 821
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L S P Y LL++A+C G +++A + +M+K + PS + I+G
Sbjct: 501 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 560
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A++ M+R C P+ TY +I+ + K A+ + ++M PN T
Sbjct: 561 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 620
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS- 320
YT ++ +A G +A E F +++ +G++ DVY Y L+ A RM R
Sbjct: 621 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 680
Query: 321 ----------YNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 681 FQKIPRNTFIYNILIDGWARRG 702
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 156 TYALLLKAYC------MSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
TY++L+ + SG +E+AE + REM + G+ VY+S + G N K +
Sbjct: 369 TYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCL 428
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+F+R+K +PS +Y ++NLY K K AL + EM S K N TY+ L+N F
Sbjct: 429 VVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF 488
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDR 318
A IFE++ +G++PD YN L+EA+ + M +P
Sbjct: 489 IHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSN 548
Query: 319 ASYNIMVDAYGRAG 332
++ +++ Y AG
Sbjct: 549 RAFRPIIEGYAVAG 562
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLIEA+ + +A ++ R P+ + +++ Y ++G ++ A MR+
Sbjct: 518 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 577
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKA 237
G P+ + YN+ I GL++ Q+AV + +M P+ TYT+++ Y GKA
Sbjct: 578 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 637
Query: 238 SKSFM-----------------------------ALKLFNEMRSHKCKPNICTYTALVNA 268
+ F AL + EM K N Y L++
Sbjct: 638 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 697
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPD 317
+AR G EAE++ +Q++ G+ P+++ Y + + A ++I M +G +P+
Sbjct: 698 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 757
Query: 318 RASYNIMVDAYGRAGL 333
+Y ++ + R L
Sbjct: 758 VKTYTTLIKGWARVSL 773
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 17/226 (7%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L+I Y ++ A T+ + P + L+ AY ++ + A + EM+
Sbjct: 302 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE 361
Query: 184 GLPPSAVVYNSYIDGLLK------GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
GL + V Y+ I G K GN ++A E+ + M+ D + Y M++ Y
Sbjct: 362 GLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTII 421
Query: 238 SKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAY 297
L +F ++ KP+I +Y L+N + + G +A I ++++ GI+ + Y
Sbjct: 422 QNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 481
Query: 298 NALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ L+ A+ + M G +PDRA YN++++A+ + G
Sbjct: 482 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMG 527
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ +Y LL Y G + KA ++ +EM G+ + Y+ I+G + + A I
Sbjct: 441 PSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAI 500
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M R QP Y L+I + K A+ + +M+ + +P+ + ++ +A
Sbjct: 501 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 560
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHM-GCEPDRAS 320
G + A + + ++ +G P V YNAL+ A ++ +M + G P+ +
Sbjct: 561 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 620
Query: 321 YNIMVDAYGRAG 332
Y I++ Y +G
Sbjct: 621 YTIIMRGYAASG 632
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D Y ++ Y + K VF +++ G PS + Y ++ +K G KA+ I +
Sbjct: 409 DVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE 468
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M+ + + +TY+++IN + A +F EM +P+ Y L+ AF + G
Sbjct: 469 MESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGN 528
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRASYNI 323
+ A I E++Q ++P A+ ++E Y + M GC P +YN
Sbjct: 529 MDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNA 588
Query: 324 MVDAYGR 330
++ R
Sbjct: 589 LIHGLVR 595
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +AE ++ + P TY + A C +G +++AE V EM
Sbjct: 693 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDV 752
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKAS 238
GL P+ Y + I G + P +A++ F+ MK +P +Y L+ +L +A+
Sbjct: 753 GLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 808
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 221 QPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEE 280
+PS + LMI Y K A F MR+ +PN +T+LV+A+A A
Sbjct: 294 EPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 353
Query: 281 IFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRA 319
E+++ G+E + Y+ L+ + I+ H +RA
Sbjct: 354 CVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERA 392
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN +T L++ + G +
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVD 264
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ + + LI M M G +PD+ +Y ++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLI 324
Query: 326 DAYGRAG 332
D + G
Sbjct: 325 DGCCKEG 331
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L++ + EM G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG 312
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ A E ++M ++ + YT +I+ + +S A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM + KP+ TYT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 373 KMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 158 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L +P + L+ +C +G ++ A ++++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQM 273
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++ + M +P TYT +I+ K
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 333
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + +M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 334 DTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMI 393
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 394 INEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|326509863|dbj|BAJ87147.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 757
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 98/182 (53%), Gaps = 1/182 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
LL+ K + A L+ + S + P E T A L+ AY +G+ ++A +FR M +
Sbjct: 151 LLVPILASKGMLNHARCILLDTMPSFSVCPDEATVAALVAAYGRAGIPQEAVKLFRLMPE 210
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G+ +A+ YN+ + +L G A ++ M D P+ TY +I +G K
Sbjct: 211 LGITRTALSYNAVLKAILCRGREAMARRVYNAMIADGVAPTLSTYNTLIWGFGLCKKMES 270
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A+++F +M+ H P++ TY L+NA+ R+G E A ++F+++ AG+E + +YN +++
Sbjct: 271 AVRVFGDMKGHGVAPDVTTYNTLLNAWVRKGDLESARKVFDEMPEAGLERNSISYNVMIK 330
Query: 303 AY 304
Y
Sbjct: 331 GY 332
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+ AYG+ + ++A + + + T +Y +LKA G A V+ M G
Sbjct: 188 LVAAYGRAGIPQEAVKLFRLMPELGITRTALSYNAVLKAILCRGREAMARRVYNAMIADG 247
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ YN+ I G + AV +F MK P TY ++N + + A
Sbjct: 248 VAPTLSTYNTLIWGFGLCKKMESAVRVFGDMKGHGVAPDVTTYNTLLNAWVRKGDLESAR 307
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
K+F+EM + N +Y ++ + EEA +F ++ G+ + LM
Sbjct: 308 KVFDEMPEAGLERNSISYNVMIKGYVDANKVEEALGLFTEMGEKGLRLTEKTFAVLM 364
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +++ C +G +KAE FR++ K G+ + +NS I G K G A EI M
Sbjct: 475 YNPVIEYLCNNGNTDKAETFFRQLMKKGVDDKS-AFNSLIRGHAKEGALDAAKEILAIMT 533
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R ++ L+I+ + K ++ A + M H P + +++ A +G +
Sbjct: 534 RRGVPTDPHSHALLIDSFLKKNEPADAKTALDSMMEHGHLPRPALFQSVMAALFNDGRVQ 593
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRL-------ISRMHM----GCEPD 317
A + + + GI ++ N ++EA + I R+++ GC PD
Sbjct: 594 TASRVMKSMIEKGITENMDMANKIVEALFMRGHVEEAIGRVNLMVENGCMPD 645
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 222 PSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEI 281
P T ++ YG+A A+KLF M +Y A++ A G A +
Sbjct: 180 PDEATVAALVAAYGRAGIPQEAVKLFRLMPELGITRTALSYNAVLKAILCRGREAMARRV 239
Query: 282 FEQLQGAGIEPDVYAYNALMEAYRLISRMH-----------MGCEPDRASYNIMVDAYGR 330
+ + G+ P + YN L+ + L +M G PD +YN +++A+ R
Sbjct: 240 YNAMIADGVAPTLSTYNTLIWGFGLCKKMESAVRVFGDMKGHGVAPDVTTYNTLLNAWVR 299
Query: 331 AG 332
G
Sbjct: 300 KG 301
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y LL+A C SG ++ A AV REM +P + +YN IDG + G+ +A ++ ++MK
Sbjct: 652 YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK 711
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
D P+ TYT IN KA A K+ EM KPN+ TYT L+ +AR L +
Sbjct: 712 EDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPD 771
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
A + FE+++ AG++PD +Y+ L+ + L+SR
Sbjct: 772 RALKCFEEMKLAGLKPDEASYHCLVTS--LLSR 802
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ ++ A+C SG +E+AE + REM + G+ VY+S + G N K + +F+R+K
Sbjct: 372 YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 431
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+PS +Y ++NLY K K AL + EM S K N TY+ L+N F
Sbjct: 432 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 491
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGC-----------EPDRASYNIMV 325
A IFE++ +G++PD YN L+EA+ + M +P ++ ++
Sbjct: 492 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 551
Query: 326 DAYGRAG 332
+ Y AG
Sbjct: 552 EGYAVAG 558
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + A A+F EM + GL P +YN I+ K GN +A+ I ++M
Sbjct: 476 TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 535
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+++ QPS + +I Y A AL + MR C P + TY AL++ R+
Sbjct: 536 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 595
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ A + +++ AGI P+ + Y +M Y
Sbjct: 596 QRAVSVLDKMSIAGITPNEHTYTIIMRGY 624
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P E TY ++++ Y SG + KA F ++++ GL +Y + + K G Q A+ +
Sbjct: 612 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 671
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M +T Y ++I+ + + + A L +M+ PNI TYT+ +NA +
Sbjct: 672 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 731
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS----------RMHM-GCEPDRAS 320
G + AE++ E++ G++P+V Y L++ + +S M + G +PD AS
Sbjct: 732 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 791
Query: 321 YNIMVDA-YGRAGLHEGKCSYSLVEL 345
Y+ +V + RA + EG ++ +
Sbjct: 792 YHCLVTSLLSRATVMEGSTYTGIISV 817
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ E+L S P Y LL++A+C G +++A + +M+K + PS + I+G
Sbjct: 497 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 556
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A++ M+R C P+ TY +I+ + K A+ + ++M PN T
Sbjct: 557 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 616
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRAS- 320
YT ++ +A G +A E F +++ +G++ DVY Y L+ A RM R
Sbjct: 617 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 676
Query: 321 ----------YNIMVDAYGRAG 332
YNI++D + R G
Sbjct: 677 FQKIPRNTFIYNILIDGWARRG 698
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLIEA+ + +A ++ R P+ + +++ Y ++G ++ A MR+
Sbjct: 514 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 573
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------GKA 237
G P+ + YN+ I GL++ Q+AV + +M P+ TYT+++ Y GKA
Sbjct: 574 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 633
Query: 238 SKSFM-----------------------------ALKLFNEMRSHKCKPNICTYTALVNA 268
+ F AL + EM K N Y L++
Sbjct: 634 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 693
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPD 317
+AR G EAE++ +Q++ G+ P+++ Y + + A ++I M +G +P+
Sbjct: 694 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 753
Query: 318 RASYNIMVDAYGRAGL 333
+Y ++ + R L
Sbjct: 754 VKTYTTLIKGWARVSL 769
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P+ + L++ Y G A A F MR G+ P+A V+ S + + + A+
Sbjct: 262 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 321
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ MK + + + TY+++I+ + K + S A LF E ++ N Y+ +++A +
Sbjct: 322 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 381
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GCEPDRAS 320
G E AEE+ +++ GI+ + Y+++M Y +I + G +P S
Sbjct: 382 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 441
Query: 321 YNIMVDAYGRAG 332
Y +++ Y + G
Sbjct: 442 YGCLLNLYVKIG 453
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 11/217 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I A+ Q ++AE E+ + D Y ++ Y + K VF +++ G
Sbjct: 375 IIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECG 434
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PS + Y ++ +K G KA+ I + M+ + + +TY+++IN + A
Sbjct: 435 FKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAF 494
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F EM +P+ Y L+ AF + G + A I E++Q ++P A+ ++E Y
Sbjct: 495 AIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGY 554
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGR 330
+ M GC P +YN ++ R
Sbjct: 555 AVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR 591
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY++L+ + + A+ +F+E + + ++Y++ I + GN ++A E+ + M
Sbjct: 336 TYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREM 395
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ D + Y M++ Y L +F ++ KP+I +Y L+N + + G
Sbjct: 396 EEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKV 455
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
+A I ++++ GI+ + Y+ L+ A+ + M G +PDRA YN++
Sbjct: 456 AKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLL 515
Query: 325 VDAYGRAG 332
++A+ + G
Sbjct: 516 IEAFCKMG 523
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + ++ +AE ++ + P TY + A C +G +++AE V EM
Sbjct: 689 ILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDV 748
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY-TLMINLYGKAS 238
GL P+ Y + I G + P +A++ F+ MK +P +Y L+ +L +A+
Sbjct: 749 GLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRAT 804
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N Q V F+R+ + PS + LMI Y K A F MR+ +PN +T
Sbjct: 248 NWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 303
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLIS 308
+LV+A+A A E+++ G+E + Y+ L+ + I+
Sbjct: 304 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKIN 348
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY + C G A + R+M + + P+ V+Y++ IDGL K G +
Sbjct: 215 PDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHN 274
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M+ P+ TY MI + + + A +L EM K PN+ TY AL+NAF
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRA 319
+EG EA E+++++ GI P+ YN++++ + RL + M GC PD
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394
Query: 320 SYNIMVDAY 328
++ ++D Y
Sbjct: 395 TFTTLIDGY 403
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y+ ++ C G + +F EM+ G+ P+ V YN I G G A +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M P+ TY +IN + K K F A +L++EM PN TY ++++ F +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----PDRA------S 320
+ + AE++F + G PDV+ + L++ Y R+ G E P R +
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 321 YNIMVDAYGRAG 332
YN ++ + G
Sbjct: 431 YNTLIHGFCLVG 442
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + H + ++E+ D P TY ++ +C+SG A+ + +EM +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YN+ I+ +K G +A E++ M P+T TY MI+ + K + A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M + C P++ T+T L++ + ++ E+ ++ G+ + YN L+ +
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
L+ ++ G PD + N ++D
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ +A Y E+L IP TY ++ +C L+ AE +F M G
Sbjct: 329 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 388
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + + IDG +E+ M R +T TY +I+ + AL
Sbjct: 389 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 448
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-----------GIEPD 293
L +M S P+I T L++ G ++A E+F+ +Q + G+EPD
Sbjct: 449 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 508
Query: 294 VYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDA 327
V YN L +EA L M H G PD +Y+ M+D
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 22/246 (8%)
Query: 91 PTHATWDDLIN-VSVQLRLNKKWDPIVLMSC--------VSILLIEAY-GQKSLHKKAEF 140
P T++ +I+ Q RL+ D LM+ LI+ Y G K + E
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ E+ + TY L+ +C+ G L A + ++M G+ P V N+ +DGL
Sbjct: 416 LH-EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474
Query: 201 KGGNPQKAVEIFQRMKR-----------DCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
G + A+E+F+ M++ + +P TY ++I K A +L+ E
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M P+ TY+++++ ++ +EA ++F + P+V +N L+ Y R
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 310 MHMGCE 315
+ G E
Sbjct: 595 VDDGLE 600
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-----------GLPPSAVVY 192
+++ S P T LL C +G L+ A +F+ M+K G+ P + Y
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N I GL+ G +A E+++ M P T TY+ MI+ K S+ A ++F M S
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
PN+ T+ L+N + + G ++ E+F ++ GI D Y L+ +R + ++
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 631
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ G +AE ++ EM G+ P + Y+S IDGL K +A ++
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ T+ +IN Y KA + L+LF EM + Y L+ F +
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G A +IF+++ +G+ PD ++ +
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 45/221 (20%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI------------------- 196
++ +L+K +C L A + F ++ K GL P V + + +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 197 ------------DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+GL + G +AV + RM + QP TY ++ K + AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 245 KLFNEMR--SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
L +M SH KPN+ Y+A+++ ++G ++ +F ++Q GI P++ YN ++
Sbjct: 238 NLLRKMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A RL+ M P+ +YN +++A+ + G
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
LE A +F +M + PS + +N + +++ P + ++Q+M+R + ++T+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I + SK AL F ++ P++ T+T L++ + EA ++F Q+
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
PDV + LM EA L+ RM G +PD+ +Y VD + G
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE Y E+ +P TY+ ++ C L++A +F M P+ V +N+ I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+G K G +E+F M R Y +I + K AL +F EM S
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
P+ T ++ F + E A + E LQ
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ ++S +A ++ + P T+ L+ YC +G ++ +F EM + G
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
+ A++Y + I G K GN A++IFQ M P T T M+
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMR 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K S+ A LF EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMV 325
A +I+ Q+ G PDV YN L+ +A L+ M G +PD+ +Y ++
Sbjct: 259 LAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLI 318
Query: 326 DAYGRAG 332
D + G
Sbjct: 319 DGSCKEG 325
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 MRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S +A + E+LD+ +P T+ L+ +C +G L+ A ++R+M
Sbjct: 208 TYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G P V YN+ I GL K G+ ++A + M R +P TYT +I+ K
Sbjct: 268 LNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A +L M + + YTAL+ +EG +AE++ ++ G++PD Y +
Sbjct: 328 ETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMI 387
Query: 301 MEAY 304
M +
Sbjct: 388 MNEF 391
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY++L+ C +++A +F EM GL P+ V + + IDG K G A++I
Sbjct: 204 PDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDI 263
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+++M P TY +I K A L +EM KP+ TYT L++ +
Sbjct: 264 YRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCK 323
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG E A E+ E++ I D Y AL+ +A +++ M +G +PD +
Sbjct: 324 EGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDET 383
Query: 321 YNIMVDAYGRAG 332
Y ++++ + + G
Sbjct: 384 YTMIMNEFCKKG 395
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 108 LNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMS 167
LN+ + P V+ LI +K K+A + E+ P + TY L+ C
Sbjct: 268 LNQGFSPDVVTYNT---LIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKE 324
Query: 168 GLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETY 227
G LE A + M K + VVY + I GL + G A ++ + M R +P ETY
Sbjct: 325 GDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETY 384
Query: 228 TLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
T+++N + K A +L EM+ + P + T
Sbjct: 385 TMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 89 LPPTHATWDDLIN---------VSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAE 139
L P T+ LI+ + +LR + I L V LI Q+ AE
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAE 366
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV 191
E+L P ++TY +++ +C G ++KA + REM++ G P V
Sbjct: 367 KMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYL-ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+I+A G+ + + Y ++L P T+ LL A +G LE A VF EM
Sbjct: 64 VIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHL 123
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G YN+++D + K GN + A ++ M+ + +P+ TY+ +++ + K K A
Sbjct: 124 GSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEA 183
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
LKL +M+S + + Y L+ + + G +E + E ++ GIE D YN+L+
Sbjct: 184 LKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLING 243
Query: 304 YRLISRMHM-----------GCEPDRASYNIMVDAYGRAGLH 334
Y R+ M G P +Y+ ++D Y +AG+H
Sbjct: 244 YGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMH 285
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGG-NPQKAVEIFQRM 215
++ L+ AY SGL +A V M+ GL P+ V YN+ ID KGG + + + F++M
Sbjct: 26 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 85
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+D P +T+ ++ +A A +F+EM +I TY V+A + G
Sbjct: 86 LQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNM 145
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
E A ++ ++ I+P+V Y+ LM EA +L +M +G + DR YN +
Sbjct: 146 ELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTL 205
Query: 325 VDAYGRAGLHE 335
+ Y + G ++
Sbjct: 206 LAIYVKTGKYD 216
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY+ L+ + ++A + +M+ G+ V YN+ + +K G + +
Sbjct: 162 PNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATV 221
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ + T TY +IN YGK + M L +MR+ P++ TY+ L++ +++
Sbjct: 222 CEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSK 281
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVY---------AYNALME-AYRLISRM-HMGCEPDRAS 320
G+ +A ++ + +G++ DV A N L+E A L+ M MG +P+ +
Sbjct: 282 AGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVT 341
Query: 321 YNIMVDAYGRA 331
YN ++DA+G++
Sbjct: 342 YNTIIDAFGKS 352
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 55/265 (20%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI YG++ F ++ P+ TY+ L+ Y +G+ A V+ + ++ G
Sbjct: 240 LINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 299
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA------- 237
L V+++S+ID L K G + A+ + M + +P+ TY +I+ +GK+
Sbjct: 300 LKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTEED 359
Query: 238 ------------------------------------SKSFMALKLFNEMRSHKCKPNICT 261
+ F L+LF +M +PN+ T
Sbjct: 360 PGNMGIVGVYGGQIVRATNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVT 419
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVY--AYNALM-------EAYRLISRM-H 311
++A++NA +R E+A + EQL+ + VY AY LM +A L +++
Sbjct: 420 FSAILNACSRCNNFEDAALLLEQLR--LFDNSVYGVAYGLLMGHLEAWSQARSLFNQLGR 477
Query: 312 MGCEPDRASYNIMVDAYGRAGLHEG 336
M A YN + D G +G
Sbjct: 478 MDSPTSSAFYNALTDVLWHFGQRQG 502
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY L+ Y G L+ + ++MR G+ PS + Y++ ID K G A ++
Sbjct: 236 TYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDF 295
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
K + ++ I+ K AL L +EM KPN+ TY +++AF + +
Sbjct: 296 KESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKIL 355
Query: 276 EEAE 279
E +
Sbjct: 356 TEED 359
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
+A + F+ + + + ++AL++A+AR GL EA + E ++GAG+ P +YNA++
Sbjct: 6 LARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVI 65
Query: 302 EA--------------YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
+A +R + + G PDR ++N ++ A RAG
Sbjct: 66 DACGKGGVDLRFTLGYFRQM--LQDGLCPDRKTFNSLLAACSRAG 108
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + AE + +M + G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
PP+ V +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA + AL
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M PN Y+++ +A + EG + ++FE +Q + D YNA++
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSL 577
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y I++ G
Sbjct: 578 CKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGF 617
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + L ++ + ++ + C P YA ++ C LE A + M YG
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P+ V YN+ + GL ++A + M C T+ ++++ + +
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
++ +M H C P++ TYT ++N F +EGL +EA + + G P+ +Y ++
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGL 437
Query: 302 -------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
+A L+S+M GC P+ ++N +++ + GL E
Sbjct: 438 CSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 479
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++AE E+ D C + T+ +L+ C +GL+++ V +M ++G P + Y +
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTV 398
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A +L ++M C
Sbjct: 399 INGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGC 458
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE 315
PN T+ L+N ++GL E+A E+ +Q+ + GC
Sbjct: 459 PPNPVTFNTLINFLCKKGLVEQAIELLKQM------------------------LVNGCS 494
Query: 316 PDRASYNIMVDAYGRAG 332
PD SY+ ++D G+AG
Sbjct: 495 PDLISYSTVIDGLGKAG 511
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 12/222 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDS-RCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRK 182
L+++A + +A +LL S C P +Y +L+ CM+ + + EM
Sbjct: 186 LVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVA 245
Query: 183 YGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM 242
G PP+ V +++ I L + G ++ E+ +M C P Y +I+ K + +
Sbjct: 246 AGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305
Query: 243 ALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME 302
A + N M S+ PN+ Y L+ EEAE + ++ D +N L++
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD 365
Query: 303 ---AYRLISR--------MHMGCEPDRASYNIMVDAYGRAGL 333
L+ R + GC PD +Y +++ + + GL
Sbjct: 366 FLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE +++ C P T+ L+ C GL+E+A + ++M G P + Y++ ID
Sbjct: 446 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 505
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYT----------------------------- 228
GL K GN +A+E+ M + P+T Y+
Sbjct: 506 GLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRS 565
Query: 229 ------LMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIF 282
+I+ K ++ A++ M S C PN TYT L+ A EG +EA+EI
Sbjct: 566 DAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625
Query: 283 EQLQGAG 289
+L G
Sbjct: 626 TELCSKG 632
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 12/188 (6%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C PT Y + L+A C + A V R++ G N + + G +AV
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201
Query: 210 EIFQRMKRD-CCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNA 268
+ + + C+P +Y ++ A + L EM + C PNI T++ L+
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPD 317
R GL E E+ Q+ G PDV Y +++ A +++RM G P+
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321
Query: 318 RASYNIMV 325
YN ++
Sbjct: 322 VVCYNTLL 329
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 15/191 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G + A R + P+A Y + L G A+ + M
Sbjct: 82 YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P+ Y + + +AS A+ + ++ C ++ ++ A +G +
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 277 EAEEIFEQLQGA-GIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIM 324
EA + L + G EPDV +YNA++ + R + GC P+ +++ +
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 325 VDAYGRAGLHE 335
+ R GL E
Sbjct: 259 IGHLCRNGLFE 269
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ + L +A LE+ C P TY++L+ C +GL A+ +F EM K
Sbjct: 376 VLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKL 435
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK---------RDCCQPS----TETYTLM 230
G PSAV +NS IDGL K G +KA +F +M+ R PS + + M
Sbjct: 436 GCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKM 495
Query: 231 INLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI 290
+ + A ++ ++ P I TY LVN F + G A ++F ++Q G+
Sbjct: 496 VEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGL 555
Query: 291 EPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
PD Y L+ +AY++ +M GC PD A Y M+
Sbjct: 556 SPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMM 601
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%)
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
D + +L+K Y GL +KA F MR + P YN +D L++ A+ ++ R
Sbjct: 127 DAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTR 186
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGL 274
M + C P+ T++++I+ K+ AL LF+EM P+ TY +++ R
Sbjct: 187 MMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246
Query: 275 CEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM 310
++A +F++++ +G+ PD NAL+ + ++ R+
Sbjct: 247 VDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRV 282
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y + L KA T+ + D C P TY ++L L A V+ M K
Sbjct: 131 VLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKL 190
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
P+ ++ IDGL K GN + A+ +F M + P TY ++I+ ++ + A
Sbjct: 191 NCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDA 250
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM-- 301
+LF++M+ P+ T AL+N F +EA + + G DV Y+ L+
Sbjct: 251 YRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRG 310
Query: 302 -------EAYRLISRMHM--GCEPDRASYNIMVDAYGRAG 332
E +L+ R + +PD Y IM+ AG
Sbjct: 311 LFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAG 350
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 46/256 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++++ QK+ A Y ++ C+P T+++L+ C SG ++ A +F EM +
Sbjct: 166 MILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQR 225
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN---LYGKASKS 240
G+ P A Y I GL + A +F +MK P T ++N + + ++
Sbjct: 226 GILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEA 285
Query: 241 FMALKLFN------EMRSHKC--------------------------KPNICTYTALVNA 268
F L+LF ++R + C KP++ YT ++
Sbjct: 286 FSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKG 345
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRM--------HMGCEPD 317
A G +A E+ ++ +G+ PD YN L++ + L+S C P+
Sbjct: 346 LAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPN 405
Query: 318 RASYNIMVDAYGRAGL 333
+Y+I++ R GL
Sbjct: 406 VKTYSILISGMCRNGL 421
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 38/208 (18%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y+ L++ + E + ++R+M + + P +Y + GL + G + A+E+ M
Sbjct: 304 YSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMT 363
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS-------HKCKPNICTYTALVNAF 269
P T Y ++I K F + L +E RS H C PN+ TY+ L++
Sbjct: 364 ESGVVPDTVCYNVLI-------KGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRMHMGCEP--- 316
R GL +A+EIF +++ G P +N+L++ A+ L +M +G P
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLF 476
Query: 317 -----------DRASYNIMVDAYGRAGL 333
D AS MV+ +GL
Sbjct: 477 LRLSQGPSHVLDSASLQKMVEQLCDSGL 504
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + ++ + Y ++++ P Y +++K +G + A + EM + G
Sbjct: 307 LIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESG 366
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V YN I G G +A + + R C P+ +TY+++I+ + + A
Sbjct: 367 VVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQ 426
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQL-------------QGAGIE 291
++FNEM C P+ T+ +L++ + G E+A +F ++ QG
Sbjct: 427 EIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHV 486
Query: 292 PDVYAYNALME----------AYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEG 336
D + ++E AYR++ ++ G P +YNI+V+ + + G G
Sbjct: 487 LDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNG 542
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+++ C SGL+ KA + ++ G P YN ++G K GN A ++F+ M+
Sbjct: 495 MVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG 554
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
P T TY +IN + + A K+F++M + C P+ Y ++ R
Sbjct: 555 LSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCR 606
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/178 (18%), Positives = 70/178 (39%), Gaps = 46/178 (25%)
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
D L+ + + + +K + + + ++I +Y K + A++ F MR C
Sbjct: 99 DLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCT 158
Query: 257 PNICTYTALVNAFAR------------------------------EGLC-----EEAEEI 281
P++ TY +++ + +GLC ++A +
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218
Query: 282 FEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
F+++ GI PD + Y ++ +AYRL +M G PD + N +++ +
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGF 276
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A+ LI M M G + D+ +Y ++
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322
Query: 326 DAYGRAG 332
D + G
Sbjct: 323 DGCCKEG 329
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L++A + EM G
Sbjct: 251 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 310
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L + Y + IDG K G+ A E +RM ++ + YT +I+ + +S A
Sbjct: 311 LKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 370
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
K+ EM S KP+ TYT ++N F ++G + ++ + +Q G P V YN LM
Sbjct: 371 KMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 201 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGR 260
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFM--ALKLFNEMRSHKCKPNICTY 262
A+EI+++M P TY +I YG K + A L +EM K + TY
Sbjct: 261 VDLAMEIYKQMLSQSLLPDLITYNTLI--YGLCKKGDLKQAHDLIDEMSMKGLKXDKITY 318
Query: 263 TALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-H 311
T L++ +EG + A E +++ I D AY AL+ +A +++ M
Sbjct: 319 TTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 378
Query: 312 MGCEPDRASYNIMVDAYGRAG 332
+G +PD +Y ++++ + + G
Sbjct: 379 VGLKPDTXTYTMIINEFCKKG 399
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ W L P+ +++ L+N ++L LN+ + +L S V
Sbjct: 156 IRIAQSVFDAIAKW----GLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVY 211
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L P T+ L+ +C +G ++ A ++++M
Sbjct: 212 TYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 271
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M + TYT +I+ K
Sbjct: 272 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDL 331
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++PD Y +
Sbjct: 332 DAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMI 391
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 392 INEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 138/280 (49%), Gaps = 35/280 (12%)
Query: 80 NTIWDAFDSLPPTHATWDDLINVSVQLRLNKKWDPIVL----MSCVSIL--------LIE 127
+T+ D +S+P ++++ + LI+ LR K +D ++ M+ VS+ LIE
Sbjct: 47 HTLQDYPNSIP-SYSSCNTLID---NLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIE 102
Query: 128 AYGQKSLHKKAEFTY--LELLDSRCIPTED-TYALLLKAYCMSGLLEKAEAVFREMRKYG 184
++ +K F + L L+ R + LLLK +C SG KA +F M++
Sbjct: 103 SFVNT---QKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC 159
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P V YN+ I+GL KG +A E+F+ MK C+P++ T++ +I+ + K
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
L EM + ++ Y+AL++ F +G E +E+F ++ + P+V Y+ LM
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 302 -------EAYRLISRMHMGCE--PDRASYNIMVDAYGRAG 332
EA +++ M GC+ PD +Y ++ D + G
Sbjct: 280 CKKQKWKEAAQMLDTM-TGCKVRPDVVAYTVLADGLSKNG 318
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+A+ + E+ C P T++ L+ +C +G +E+ + EM K GL VY++ I
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
G G+ ++ E+F M R P+ TY+ ++N K K A ++ + M K +
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRL 306
P++ YT L + ++ G +A ++ + + G EP+ YNA++ +A +
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361
Query: 307 ISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ M G +PD +Y+ +V G
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVG 388
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + L+++ C L A+ V+ M + G P + V YN IDG L G KA+E+
Sbjct: 409 PDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
++ P+ TYT++IN K +A LFN+ R+ +P + Y L+ + R
Sbjct: 469 WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA-----------YRLISRMHMGCEPDRAS 320
E E+A +F++++ A +PDV ++N +++ L+ ++M PD +
Sbjct: 529 ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNIT 588
Query: 321 YNIMVDAYGRAGLHEGKCSYSLVELSVKHYP 351
++I+++ + + G + S +S H P
Sbjct: 589 FSILINRFLKLGQLDEAASLYERMVSCGHVP 619
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI + K ++ + + E+L P TY+ L+ A C ++A + M
Sbjct: 240 LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK 299
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P V Y DGL K G A+++ M + +P+ TY +IN K + AL
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA--GIEPDVYAYNALME 302
+ M KP++ TY+ LV G +EA ++ L I+PDV+A+N +++
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQ 419
Query: 303 A--------------YRLISRMHMGCEPDRASYNIMVDAYGRAG 332
Y ++ R G + +YNI++D Y AG
Sbjct: 420 ELCKQRRLRHAKRVYYTMVER---GFPSNIVTYNILIDGYLSAG 460
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+LI+ Y KA + + +DS P TY +L+ C +L A+ +F + R
Sbjct: 451 ILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRAS 510
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P+ YN+ + L + + ++A +FQ M+ P ++ ++I+ KA A
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+L EM + P+ T++ L+N F + G +EA ++E++ G PD +++L++
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630
Query: 304 YRL 306
Y L
Sbjct: 631 YSL 633
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 48/229 (20%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY ++ C G ++ A + M K G P V Y++ + GL G +AV++
Sbjct: 337 PNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDL 396
Query: 212 -----------------FQRMKRDCCQ-------------------PST-ETYTLMINLY 234
F + ++ C+ PS TY ++I+ Y
Sbjct: 397 LNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGY 456
Query: 235 GKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
A K AL+L+ + PN TYT L+N + + A+ +F + + +G P V
Sbjct: 457 LSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTV 516
Query: 295 YAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
YN LM +A L M + +PD S+NI++D +AG
Sbjct: 517 SEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAG 565
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT Y L+ + C +E+A +F+EMR P V +N IDG LK G+ + A E+
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKEL 573
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
M P T++++IN + K + A L+ M S P+ + +L+ ++
Sbjct: 574 LLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSL 633
Query: 272 EGLCEEAEEIFEQLQGAGIEPD 293
+G E+ + +Q+ + D
Sbjct: 634 KGKTEKVVSMLQQMADKDVVLD 655
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 151 IPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVE 210
+P T+++L+ + G L++A +++ M G P AV+++S + G G +K V
Sbjct: 583 VPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVS 642
Query: 211 IFQRM-KRDCCQPSTETYTLM 230
+ Q+M +D S T T++
Sbjct: 643 MLQQMADKDVVLDSKLTSTIL 663
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG-LPPSAVVYNSYIDGLLKGGNPQKAVE 210
P + TY + C G A + R+M + + P+ V+Y++ IDGL K G +
Sbjct: 215 PDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHN 274
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+F M+ P+ TY MI + + + A +L EM K PN+ TY AL+NAF
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----RLISRMHM-------GCEPDRA 319
+EG EA E+++++ GI P+ YN++++ + RL + M GC PD
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394
Query: 320 SYNIMVDAY 328
++ ++D Y
Sbjct: 395 TFTTLIDGY 403
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P Y+ ++ C G + +F EM+ G+ P+ V YN I G G A +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q M P+ TY +IN + K K F A +L++EM PN TY ++++ F +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCE-----PDRA------S 320
+ + AE++F + G PDV+ + L++ Y R+ G E P R +
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 321 YNIMVDAYGRAG 332
YN ++ + G
Sbjct: 431 YNTLIHGFCLVG 442
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ + H + ++E+ D P TY ++ +C+SG A+ + +EM +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ V YN+ I+ +K G +A E++ M P+T TY MI+ + K + A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+F M + C P++ T+T L++ + ++ E+ ++ G+ + YN L+ +
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Query: 305 RLISRMHM-----------GCEPDRASYNIMVDA 327
L+ ++ G PD + N ++D
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI A+ ++ +A Y E+L IP TY ++ +C L+ AE +F M G
Sbjct: 329 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 388
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + + IDG +E+ M R +T TY +I+ + AL
Sbjct: 389 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 448
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGA-----------GIEPD 293
L +M S P+I T L++ G ++A E+F+ +Q + G+EPD
Sbjct: 449 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 508
Query: 294 VYAYNAL----------MEAYRLISRM-HMGCEPDRASYNIMVDA 327
V YN L +EA L M H G PD +Y+ M+D
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 22/246 (8%)
Query: 91 PTHATWDDLIN-VSVQLRLNKKWDPIVLMSC--------VSILLIEAY-GQKSLHKKAEF 140
P T++ +I+ Q RL+ D LM+ LI+ Y G K + E
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415
Query: 141 TYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLL 200
+ E+ + TY L+ +C+ G L A + ++M G+ P V N+ +DGL
Sbjct: 416 LH-EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474
Query: 201 KGGNPQKAVEIFQRMKR-----------DCCQPSTETYTLMINLYGKASKSFMALKLFNE 249
G + A+E+F+ M++ + +P TY ++I K A +L+ E
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534
Query: 250 MRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
M P+ TY+++++ ++ +EA ++F + P+V +N L+ Y R
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 310 MHMGCE 315
+ G E
Sbjct: 595 VDDGLE 600
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 144 ELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY-----------GLPPSAVVY 192
+++ S P T LL C +G L+ A +F+ M+K G+ P + Y
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 193 NSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRS 252
N I GL+ G +A E+++ M P T TY+ MI+ K S+ A ++F M S
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 253 HKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH 311
PN+ T+ L+N + + G ++ E+F ++ GI D Y L+ +R + ++
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 631
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +L+ G +AE ++ EM G+ P + Y+S IDGL K +A ++
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F M P+ T+ +IN Y KA + L+LF EM + Y L+ F +
Sbjct: 567 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 626
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
G A +IF+++ +G+ PD ++ +
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 45/221 (20%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI------------------- 196
++ +L+K +C L A + F ++ K GL P V + + +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 197 ------------DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+GL + G +AV + RM + QP TY ++ K + AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 245 KLFNEMR--SHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM- 301
L +M SH KPN+ Y+A+++ ++G ++ +F ++Q GI P++ YN ++
Sbjct: 238 NLLRKMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 302 ---------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
A RL+ M P+ +YN +++A+ + G
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 170 LEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTL 229
LE A +F +M + PS + +N + +++ P + ++Q+M+R + ++T+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 230 MINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+I + SK AL F ++ P++ T+T L++ + EA ++F Q+
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 290 IEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
PDV + LM EA L+ RM G +PD+ +Y VD + G
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYI 196
+AE Y E+ +P TY+ ++ C L++A +F M P+ V +N+ I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Query: 197 DGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCK 256
+G K G +E+F M R Y +I + K AL +F EM S
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646
Query: 257 PNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
P+ T ++ F + E A + E LQ
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I+ ++S +A ++ + P T+ L+ YC +G ++ +F EM + G
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ A++Y + I G K GN A++IFQ M P T T M+ + + A+
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 669
Query: 245 KLFNEMRSHK 254
+ +++ ++
Sbjct: 670 AMLEDLQRYQ 679
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+ L PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W SL P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E++D+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAGLHEGKCSYSLV-E 344
+ L++ + R+ + E PD +YN ++ YG + K + L+ E
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI--YGLCKKGDLKQAQDLIDE 301
Query: 345 LSVK 348
+S+K
Sbjct: 302 MSMK 305
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + AE + +M + G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + + +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ +A +REG + ++F+ +Q I D YNA++
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAG 332
E R I + GC P+ ++Y I++ G
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 626
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 123/271 (45%), Gaps = 26/271 (9%)
Query: 91 PTHATWDDLINVSVQLR---LNKKW-------DPIVLMSCVSIL-----LIEAYGQKSLH 135
P+ D+++ + L+ + K+W + +V M+C + LI + L
Sbjct: 219 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 278
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++ ++ + C P YA ++ C G L+ A + M YGL P+ V YN+
Sbjct: 279 ERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTL 338
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ GL ++ E+ M C T+ ++++ + + ++L +M H C
Sbjct: 339 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGC 398
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++ +A
Sbjct: 399 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 458
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L+S+M GC + ++N +++ + GL E
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++ E E+ D C + T+ +L+ +C +GL+++ + +M +G P + Y +
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTV 408
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A L ++M C
Sbjct: 409 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGC 468
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
N T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 469 PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE 528
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A R G
Sbjct: 529 LLNVMVNKGMSPNTIIYSSIASALSREG 556
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 11/221 (4%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
L++ A + KA +L C P +Y +LK CM+ + + EM +
Sbjct: 197 LVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PP+ V +N+ I L + G ++ E+ +M C P Y +I+ K +A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA 316
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++ N M S+ KPN+ Y L+ EE EE+ ++ D +N L++
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376
Query: 304 Y----------RLISRMHM-GCEPDRASYNIMVDAYGRAGL 333
+ L+ +M + GC PD +Y +++ + + GL
Sbjct: 377 FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGL 417
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G LE A R +PP+A Y + L G A+ + M
Sbjct: 93 YNAMVAGYCRAGQLESAR---RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P Y +++ + A+++ ++ + C ++ ++NA +G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
+A + L G EPDV +YNA+++ + R + M C P+ ++N ++
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 270 SYLCRNGLFE 279
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 11/187 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++L+A C G A V ++ G N ++ + G+ KA+
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + + C+P +Y ++ A + +L EM C PNI T+ L++
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
R GL E E+ Q+ G PD+ Y +++ A+ +++RM G +P+
Sbjct: 273 CRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNV 332
Query: 319 ASYNIMV 325
YN ++
Sbjct: 333 VCYNTLL 339
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++A C G + A AV EM + G P +Y+ ++ +GG + AV +
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ + C L++N AL L ++ S C+P++ +Y A++
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDRAS 320
+E+ E++ P++ +N L+ + ++++M GC PD
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRM 299
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 300 YATIIDGICKEG 311
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K L ++A ++L + C P +Y+ ++ +G ++A + M G
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y+S L + G K +++F ++ + Y +I+ K ++ A+
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ M S C PN TYT L+ A EG +EA+E+ +L G
Sbjct: 598 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|41393251|gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|108712189|gb|ABF99984.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 884
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 15/223 (6%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+++ Y Q + ++ + S P +A+L K + +G + + VF+EMR+ G
Sbjct: 249 ILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVG 308
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ VYN+ ++ L K G P A +F+ M + +P+ T T + +YG+A AL
Sbjct: 309 IKPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDAL 368
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGI----EPDVYAYNAL 300
+L+ +MR K + L++ A GL EAE++F +++ + +PD ++Y A+
Sbjct: 369 QLWEQMREKKLPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAM 428
Query: 301 MEAY----------RLISRM-HMGCEPDRASYNIMVDAYGRAG 332
+ Y +L + M G EP+ SY I++ G+AG
Sbjct: 429 INIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAG 471
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
L+EA G+ A + E+ P T L K Y + A ++ +MR+
Sbjct: 319 LLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKK 378
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKR----DCCQPSTETYTLMINLYGKASKS 240
LP ++ N+ + G +A ++F MK D +P +YT MIN+YG + +
Sbjct: 379 LPADNILCNTLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDA 438
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
AL+LF EM +PNI +YT ++ + G +EA ++ E G++PD
Sbjct: 439 DRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 491
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 137 KAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM-RKYGLPPSAVVYNSY 195
+AE L++L S TY+ L+ A +KA F M G+ P V Y++
Sbjct: 190 QAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAI 249
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+D + G ++ + +F R + +P + ++ ++G+A +F EMR
Sbjct: 250 LDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGI 309
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
KPNI Y AL+ A + G A +FE++ G+EP+ AL + Y
Sbjct: 310 KPNIFVYNALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIY 358
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
D+ IN+ QL +++ + P C L++ + + AE + E+L+ C P
Sbjct: 853 DEAINLYYQL-MSEGFSPT---PCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAI 908
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +LL Y ++G EK +F M + G+ P Y ID L G + F+++
Sbjct: 909 YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P TY L+I+ GK+ + AL L+N+M PN+ TY +L+ + G
Sbjct: 969 DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAA 1028
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRL----------ISRMHM-GCEPDRASY 321
EA +++E+L G +P+V+ YNAL+ Y + RM + GC P+ ++Y
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y + A C G +++A VF EM++ G+ P YNS I G LK +A+E+F M
Sbjct: 348 SYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM 407
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T+ L IN +GK+ +S ALK + M+S P++ A++ A+ G
Sbjct: 408 NIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRL 467
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
A+ +F +L+ GI PD Y ++ EA ++ + M C PD + N +
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSL 527
Query: 325 VDAYGRAG 332
+D +AG
Sbjct: 528 IDMLYKAG 535
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + E+ C P E TY L+L A S +E + EM G + V YN+ I
Sbjct: 785 AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL+K +A+ ++ ++ + P+ TY +++ K A LF+EM C+P
Sbjct: 845 GLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEP 904
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------ 311
N Y L+N + G E+ E+FE + G+ PD+ +Y +++ R++
Sbjct: 905 NCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYF 964
Query: 312 -----MGCEPDRASYNIMVDAYGRAG-LHEGKCSYSLVE 344
MG EPD +YN+++ G++G L E Y+ +E
Sbjct: 965 KQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDME 1003
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ S +L++A ++ ++ G P+ Y +DGLLK GN + A +F M
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C+P+ Y +++N Y A + +LF M P+I +YT +++ +G
Sbjct: 898 LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 957
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+ F+QL G+EPD+ YN L+ EA L + M G P+ +YN +
Sbjct: 958 NDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017
Query: 325 VDAYGRAG 332
+ G+AG
Sbjct: 1018 ILYLGKAG 1025
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L I +G+ KA Y EL+ S+ I P +L +G L A+ VF E++
Sbjct: 420 VLFINYHGKSGESLKALKRY-ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELK 478
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P + Y I K N +A++IF M + C P +I++ KA +
Sbjct: 479 AMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGN 538
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A K+F E++ +P CTY L+ REG +E ++ E + P++ YN ++
Sbjct: 539 EAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVL 598
Query: 302 E----------AYRLISRMHM-GCEPDRASYNIMV 325
+ A ++ M M GC PD +SYN ++
Sbjct: 599 DCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM 633
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y + ++ +G LE+A + R+M + G P V I L G A ++
Sbjct: 239 PNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDV 298
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +MK +P TY +++ G + S +++N +++ N+ +YTA V+A +
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HM---GCEPDRAS 320
G +EA ++F++++ GI P Y+YN+L+ + R HM G P+ +
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYT 418
Query: 321 YNIMVDAYGRAG 332
+ + ++ +G++G
Sbjct: 419 HVLFINYHGKSG 430
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L + + SG KA + M+ G+ P V N+ + GL K G A +
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K P TYT+MI KAS + A+K+F EM ++C P++ +L++ +
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC-EPDRAS 320
G EA +IF +L+ +EP YN L+ E +L+ M+ P+ +
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593
Query: 321 YNIMVDAYGRAG 332
YN ++D + G
Sbjct: 594 YNTVLDCLCKNG 605
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ C G L + F+++ GL P + YN I GL K G ++A+ +
Sbjct: 939 PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSL 998
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M++ P+ TY +I GKA K+ A K++ E+ + KPN+ TY AL+ ++
Sbjct: 999 YNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSV 1058
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G E A + ++ G P+ Y L
Sbjct: 1059 SGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ + A + G L A M++ G+ +A YN I L+K G ++A+++++ M
Sbjct: 138 TFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAM 197
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D P+ TY++++ +GK + + L EM + +PN+ +YT + + G
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----AYRLISRMHM-------GCEPDRASYNIM 324
EEA I +++ G +PDV L++ A RL + +PDR +Y +
Sbjct: 258 EEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITL 317
Query: 325 VDAYGRAG 332
+D G +G
Sbjct: 318 LDKCGDSG 325
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ L++ AE +F EM++ G P Y+ +D + K + ++I + M
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 827
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +I+ K+ A+ L+ ++ S P CTY L++ ++G
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 887
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI-----------SRMHMGCEPDRASYNIM 324
E+AE +F+++ G EP+ YN L+ YR+ S + G PD SY ++
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVV 947
Query: 325 VDAYGRAGLHEGKCSY 340
+D G SY
Sbjct: 948 IDTLCADGRLNDGLSY 963
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL SG ++ ++ G + V Y + +D L + G +A+++
Sbjct: 309 PDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDV 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK+ P +Y +I+ + KA + AL+LFN M H PN T+ +N +
Sbjct: 369 FDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGK 428
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G +A + +E ++ GI PDV A NA++ R+ MG PD +
Sbjct: 429 SGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNIT 488
Query: 321 YNIMVDAYGRA 331
Y +M+ +A
Sbjct: 489 YTMMIKCCSKA 499
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 160 LLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDC 219
+++ +C A + ++ G+ YN+ I GL+ A E+F MKR
Sbjct: 737 IIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 796
Query: 220 CQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAE 279
C P TY L+++ GK+ + LK+ EM + K TY +++ + + +EA
Sbjct: 797 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 856
Query: 280 EIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAY 328
++ QL G P Y L+ +A L M GCEP+ A YNI+++ Y
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916
Query: 329 GRAGLHEGKCSY--SLVE 344
AG E C S+VE
Sbjct: 917 RIAGDTEKVCELFESMVE 934
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + S +A + E++++RC P L+ +G +A +F E+++
Sbjct: 491 MMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEM 550
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN+ + GL + G ++ +++ + M + P+ TY +++ K + A
Sbjct: 551 NLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYA 610
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
L + M + C P++ +Y ++ +EG +EA +F Q++ + PD
Sbjct: 611 LDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPD 659
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +L D P TY LL+ SG LE+A +++ +M K G+ P+ YNS I L K
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGK 1023
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A ++++ + +P+ TY +I Y + A + M C+PN T
Sbjct: 1024 AGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSST 1083
Query: 262 YTALVN 267
Y L N
Sbjct: 1084 YMQLPN 1089
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI G+ ++A Y ++ P TY L+ +G +A ++ E+
Sbjct: 981 LLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK 1040
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
G P+ YN+ I G G+P+ A + RM C+P++ TY + N
Sbjct: 1041 GWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 202 GGNPQKAVEIFQRMKRDCCQP----STETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+P++A+E+F + R QP +TE+ M+ L + ++F+ M+ K
Sbjct: 78 AADPEEALELFLSVAR---QPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKA 134
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ T+ + A EG A ++ AGI + Y YN L+ EA +
Sbjct: 135 NVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVY 194
Query: 308 SRMHM-GCEPDRASYNIMVDAYGR 330
M G P +Y++++ A+G+
Sbjct: 195 KAMAADGVVPTVRTYSVLMLAFGK 218
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 40/210 (19%)
Query: 134 LHKKAEFTY-LELLDSR----CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPS 188
L K E Y L++L S C+P +Y ++ G L++A +F +M+K P
Sbjct: 601 LCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDY 660
Query: 189 AVV-----------------------------------YNSYIDGLLKGGNPQKAVEIFQ 213
A V +S ++G+LK +K++E +
Sbjct: 661 ATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAE 720
Query: 214 RMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREG 273
+ + +I + K ++ A +L + + +Y AL+ E
Sbjct: 721 NIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDED 780
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
L + AEE+F +++ G +PD + Y+ +++A
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEFTYHLILDA 810
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T + L+ +C + A + +M + V+YN+ IDG K G A+ +
Sbjct: 137 PDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVL 196
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F RM+RD + T TY ++ + + A +L +M PN+ T+TAL+NAF R
Sbjct: 197 FGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVR 256
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRAS 320
EG EA++ +E++ I+PDV+ YN+++ EA +++ M GC PD +
Sbjct: 257 EGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVT 316
Query: 321 YNIMVDAY 328
YN +++ +
Sbjct: 317 YNTLINGF 324
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 128 AYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPP 187
+G L K E + RC Y ++ +C +GL+ A +F M + G+
Sbjct: 155 VFGAVDLVSKME-------EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRA 207
Query: 188 SAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLF 247
V YNS + GL G A + + M P+ T+T +IN + + K A K +
Sbjct: 208 DTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFY 267
Query: 248 NEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM------ 301
EM P++ TY ++++ G +EA++I + + G PDV YN L+
Sbjct: 268 EEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKT 327
Query: 302 ----EAYRLISRM-HMGCEPDRASYNIMVDAYGRAG 332
E +L+ M G D ++N ++ Y +AG
Sbjct: 328 KRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAG 363
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI A+ ++ +A+ Y E++ RCI P TY ++ CM G +++A+ + M
Sbjct: 250 LINAFVREGKFLEAKKFYEEMI-RRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTK 308
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G P V YN+ I+G K + ++ + M + T T+ +I Y +A + A
Sbjct: 309 GCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
++F+ M S +PNI TY+ L+ E+A +FE +Q + +E D+ YN ++
Sbjct: 369 QEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHG 425
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAYGRAGLHE 335
+I + G EPD +Y M+ + R L +
Sbjct: 426 MCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWD 468
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ ++ SR +P+ ++ LL S + ++F M G+ YN I+ L +
Sbjct: 57 FCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCR 116
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
A+ + +M + +P T + +IN + + ++ F A+ L ++M +CK ++
Sbjct: 117 CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVI 176
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
Y +++ F + GL A +F +++ G+ D YN+L+ +A RL+ M
Sbjct: 177 YNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMV 236
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
M P+ ++ +++A+ R G
Sbjct: 237 MRDIVPNVITFTALINAFVREG 258
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 39/186 (20%)
Query: 143 LELLDSR-CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
L+L+ ++ C P TY L+ +C + +++ + REM + GL V +N+ I G +
Sbjct: 302 LDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQ 361
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMI-------------NLYGKASKSFMALK--- 245
G P A EIF RM +P+ TY++++ L+ KS M L
Sbjct: 362 AGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITT 418
Query: 246 -------------------LFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQ 286
LF + +P++ TYT +++ F R+ L ++A+ ++ ++Q
Sbjct: 419 YNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQ 478
Query: 287 GAGIEP 292
G+ P
Sbjct: 479 EDGLLP 484
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
N +A+++F M + PS ++ +++ K+ + + LF+ M ++ TY
Sbjct: 49 NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY----------RLISRM-HM 312
++N R A + ++ G EPDV ++L+ + L+S+M M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168
Query: 313 GCEPDRASYNIMVDAYGRAGL 333
C+ D YN ++D + + GL
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGL 189
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ +C G + A++VF + K+GL PS V YN+ ++G ++ G+ + + M
Sbjct: 131 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 190
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM PN T+T L++ + G +
Sbjct: 191 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVD 250
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++++ + PD+ YN L+ +A+ LI M M G +PD+ +Y ++
Sbjct: 251 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 310
Query: 326 DAYGRAG 332
D + G
Sbjct: 311 DGCCKEG 317
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y +L +P TY L+ C G L++A + EM GL P Y + IDG K
Sbjct: 256 YKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCK 315
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ A E +RM ++ + YT +I+ + +S A K+ EM S KP+ T
Sbjct: 316 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGT 375
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
YT ++N F ++G + ++ +++Q G P V YN LM
Sbjct: 376 YTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 145 LLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGN 204
+L S P TY++L+ C ++ A +F EM GL P+ V + + IDG K G
Sbjct: 189 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGR 248
Query: 205 PQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTA 264
A+EI++RM P TY +I K A L +EM KP+ TYT
Sbjct: 249 VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 308
Query: 265 LVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMG 313
L++ +EG + A E +++ I D AY AL+ +A +++ M +
Sbjct: 309 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVD 368
Query: 314 CEPDRASYNIMVDAYGRAG 332
+PD +Y ++++ + + G
Sbjct: 369 LKPDTGTYTMIINEFCKKG 387
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNK--KWDPIVLMSCVS---- 122
+R Q D+ T W L P+ +++ L+N ++L L++ + +L S V
Sbjct: 144 IRVAQSVFDAITKW----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 199
Query: 123 --ILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+L IP T+ L+ C +G ++ A +++ M
Sbjct: 200 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRM 259
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 260 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 319
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ ++PD Y +
Sbjct: 320 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMI 379
Query: 301 MEAY----------RLISRMHM-GCEPDRASYNIMVDA 327
+ + +L+ M G P +YN++++
Sbjct: 380 INEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A +LF+EM + PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI+ Q+ + PD+ YN L+ +A L M M G +PD+ +Y ++
Sbjct: 259 LAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGSCKEGDLETAFEY 333
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L L++ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD+ +P T+ L+ +C +G ++ A ++ +M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P + Y + IDG K
Sbjct: 264 YXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G P V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A E+F+++ G+ P+
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKG 290
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
+ +L+ ++ G + A++VF + K+GL PS V +N+ ++G +K G+ + + M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
QP TY+++IN K SK A LF+EM PN T+T L++ + G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHM-GCEPDRASYNIMV 325
A EI++Q+ + PD+ YN L+ +A LI M M G +PD+ +Y ++
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318
Query: 326 DAYGRAGLHEGKCSY 340
D + G E Y
Sbjct: 319 DGNCKEGDLETAFEY 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W L P+ +++ L+N ++L LN+ + M +
Sbjct: 152 IRLAQSVFDAITKW----GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S A + E+LD +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
L P + YN+ I GL K G+ ++A ++ M +P TYT +I+ K
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
A + M + + YTAL++ +EG +AE++ ++ G++P++ Y +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMI 387
Query: 301 MEAY 304
+ +
Sbjct: 388 INEF 391
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y ++L P TY L+ C G L++A+ + EM GL P Y + IDG K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCK 323
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + A E +RM ++ + YT +I+ + +S A K+ EM S KP I T
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
YT ++N F ++G ++ +++Q G +P V
Sbjct: 384 YTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSV 416
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 177 FREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGK 236
+ E + G P S +N + +K G + A +F + + +PS ++ ++N Y K
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 237 ASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
+L N M++ +P++ TY+ L+N +E ++A +F+++ G+ P+
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243
Query: 297 YNALMEAYRLISRMHMGCE-----------PDRASYNIMVDAYGRAG 332
+ L++ + R+ + E PD +YN ++ + G
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K K+A+ E++ P + TY L+ C G LE A + M K
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ V Y + I GL + G A ++ + M +P TYT++IN + K +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGS 401
Query: 245 KLFNEMRSHKCKPNICT 261
KL EM+ KP++ T
Sbjct: 402 KLLKEMQRDGYKPSVVT 418
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 97 DDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDT 156
D+ IN+ QL +++ + P C L++ + + AE + E+L+ C P
Sbjct: 853 DEAINLYYQL-MSEGFSPT---PCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAI 908
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y +LL Y ++G EK +F M + G+ P Y ID L G + F+++
Sbjct: 909 YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
+P TY L+I+ GK+ + AL L+N+M PN+ TY +L+ + G
Sbjct: 969 DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAA 1028
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRL----------ISRMHM-GCEPDRASY 321
EA +++E+L G +P+V+ YNAL+ Y + RM + GC P+ ++Y
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y + A C G +++A VF EM++ G+ P YNS I G LK +A+E+F M
Sbjct: 348 SYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM 407
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
P+ T+ L IN +GK+ +S ALK + M+S P++ A++ A+ G
Sbjct: 408 NIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRL 467
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIM 324
A+ +F +L+ GI PD Y ++ EA ++ + M C PD + N +
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSL 527
Query: 325 VDAYGRAG 332
+D +AG
Sbjct: 528 IDMLYKAG 535
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 138 AEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYID 197
AE + E+ C P E TY L+L A S +E + EM G + V YN+ I
Sbjct: 785 AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844
Query: 198 GLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
GL+K +A+ ++ ++ + P+ TY +++ K A LF+EM C+P
Sbjct: 845 GLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEP 904
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMH------ 311
N Y L+N + G E+ E+FE + G+ PD+ +Y +++ R++
Sbjct: 905 NCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYF 964
Query: 312 -----MGCEPDRASYNIMVDAYGRAG-LHEGKCSYSLVE 344
MG EPD +YN+++ G++G L E Y+ +E
Sbjct: 965 KQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDME 1003
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
TY ++ S +L++A ++ ++ G P+ Y +DGLLK GN + A +F M
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
C+P+ Y +++N Y A + +LF M P+I +YT +++ +G
Sbjct: 898 LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 957
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH-MGCEPDRASYNIM 324
+ F+QL G+EPD+ YN L+ EA L + M G P+ +YN +
Sbjct: 958 NDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017
Query: 325 VDAYGRAG 332
+ G+AG
Sbjct: 1018 ILYLGKAG 1025
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 123 ILLIEAYGQKSLHKKAEFTYLELLDSRCI-PTEDTYALLLKAYCMSGLLEKAEAVFREMR 181
+L I +G+ KA Y EL+ S+ I P +L +G L A+ VF E++
Sbjct: 420 VLFINYHGKSGESLKALKRY-ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELK 478
Query: 182 KYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSF 241
G+ P + Y I K N +A++IF M + C P +I++ KA +
Sbjct: 479 AMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGN 538
Query: 242 MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM 301
A K+F E++ +P CTY L+ REG +E ++ E + P++ YN ++
Sbjct: 539 EAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVL 598
Query: 302 E----------AYRLISRMHM-GCEPDRASYNIMV 325
+ A ++ M M GC PD +SYN ++
Sbjct: 599 DCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM 633
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y + ++ +G LE+A + R+M + G P V I L G A ++
Sbjct: 239 PNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDV 298
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +MK +P TY +++ G + S +++N +++ N+ +YTA V+A +
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM--------HM---GCEPDRAS 320
G +EA ++F++++ GI P Y+YN+L+ + R HM G P+ +
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYT 418
Query: 321 YNIMVDAYGRAG 332
+ + ++ +G++G
Sbjct: 419 HVLFINYHGKSG 430
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P T+ L + + SG KA + M+ G+ P V N+ + GL K G A +
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F +K P TYT+MI KAS + A+K+F EM ++C P++ +L++ +
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMHMGC-EPDRAS 320
G EA +IF +L+ +EP YN L+ E +L+ M+ P+ +
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593
Query: 321 YNIMVDAYGRAG 332
YN ++D + G
Sbjct: 594 YNTVLDCLCKNG 605
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P +Y +++ C G L + F+++ GL P + YN I GL K G ++A+ +
Sbjct: 939 PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSL 998
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M++ P+ TY +I GKA K+ A K++ E+ + KPN+ TY AL+ ++
Sbjct: 999 YNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSV 1058
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
G E A + ++ G P+ Y L
Sbjct: 1059 SGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
T+ + A + G L A M++ G+ +A YN I L+K G ++A+++++ M
Sbjct: 138 TFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAM 197
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
D P+ TY++++ +GK + + L EM + +PN+ +YT + + G
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALME----AYRLISRMHM-------GCEPDRASYNIM 324
EEA I +++ G +PDV L++ A RL + +PDR +Y +
Sbjct: 258 EEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITL 317
Query: 325 VDAYGRAG 332
+D G +G
Sbjct: 318 LDKCGDSG 325
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 156 TYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRM 215
+Y L+ L++ AE +F EM++ G P Y+ +D + K + ++I + M
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 827
Query: 216 KRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLC 275
+ + TY +I+ K+ A+ L+ ++ S P CTY L++ ++G
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 887
Query: 276 EEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI-----------SRMHMGCEPDRASYNIM 324
E+AE +F+++ G EP+ YN L+ YR+ S + G PD SY ++
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVV 947
Query: 325 VDAYGRAGLHEGKCSY 340
+D G SY
Sbjct: 948 IDTLCADGRLNDGLSY 963
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY LL SG ++ ++ G + V Y + +D L + G +A+++
Sbjct: 309 PDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDV 368
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F MK+ P +Y +I+ + KA + AL+LFN M H PN T+ +N +
Sbjct: 369 FDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGK 428
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRM-----------HMGCEPDRAS 320
G +A + +E ++ GI PDV A NA++ R+ MG PD +
Sbjct: 429 SGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNIT 488
Query: 321 YNIMVDAYGRA 331
Y +M+ +A
Sbjct: 489 YTMMIKCCSKA 499
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 173 AEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
A + ++ G+ YN+ I GL+ A E+F MKR C P TY L+++
Sbjct: 750 AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILD 809
Query: 233 LYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEP 292
GK+ + LK+ EM + K TY +++ + + +EA ++ QL G P
Sbjct: 810 AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 869
Query: 293 DVYAYNALM----------EAYRLISRM-HMGCEPDRASYNIMVDAYGRAGLHEGKCSY- 340
Y L+ +A L M GCEP+ A YNI+++ Y AG E C
Sbjct: 870 TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELF 929
Query: 341 -SLVE 344
S+VE
Sbjct: 930 ESMVE 934
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ + S +A + E++++RC P L+ +G +A +F E+++
Sbjct: 491 MMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEM 550
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
L P+ YN+ + GL + G ++ +++ + M + P+ TY +++ K + A
Sbjct: 551 NLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYA 610
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPD 293
L + M + C P++ +Y ++ +E +EA +F Q++ + PD
Sbjct: 611 LDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPD 659
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
+ +L D P TY LL+ SG LE+A +++ +M K G+ P+ YNS I L K
Sbjct: 964 FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGK 1023
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G +A ++++ + +P+ TY +I Y + A + M C+PN T
Sbjct: 1024 AGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSST 1083
Query: 262 YTALVN 267
Y L N
Sbjct: 1084 YMQLPN 1089
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LLI G+ ++A Y ++ P TY L+ +G +A ++ E+
Sbjct: 981 LLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK 1040
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMIN 232
G P+ YN+ I G G+P+ A + RM C+P++ TY + N
Sbjct: 1041 GWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 202 GGNPQKAVEIFQRMKRDCCQP----STETYTLMINLYGKASKSFMALKLFNEMRSHKCKP 257
+P++A+E+F + R QP +TE+ M+ L + ++F+ M+ K
Sbjct: 78 AADPEEALELFLSVAR---QPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKA 134
Query: 258 NICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLI 307
N+ T+ + A EG A ++ AGI + Y YN L+ EA +
Sbjct: 135 NVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVY 194
Query: 308 SRMHM-GCEPDRASYNIMVDAYGR 330
M G P +Y++++ A+G+
Sbjct: 195 KAMAADGVVPTVRTYSVLMLAFGK 218
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 86/213 (40%), Gaps = 46/213 (21%)
Query: 134 LHKKAEFTY-LELLDSR----CIPTEDTY------------------------------- 157
L K E Y L++L S C+P +Y
Sbjct: 601 LCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDY 660
Query: 158 ---ALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVV----YNSYIDGLLKGGNPQKAVE 210
+L ++ SGL+++A +R+Y L P + V +S ++G+LK +K++E
Sbjct: 661 ATVCTILPSFVRSGLMKEA---LHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIE 717
Query: 211 IFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFA 270
+ + + +I K ++ A +L + + +Y AL+
Sbjct: 718 FAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLV 777
Query: 271 REGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
E L + AEE+F +++ G +PD + Y+ +++A
Sbjct: 778 DEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI Y + KA E+ D TY++++ Y G A +VF +M G
Sbjct: 376 LINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAG 435
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P + YN ++ K G +A+E+ RM+ C P+ TYT++I+ + K MA
Sbjct: 436 IKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAF 495
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
+ +M+ +P+ TY +++ A+ G + A I +++ AG+ P+ +Y L+E Y
Sbjct: 496 ETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGY 555
Query: 305 RLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
I M +G +PD +Y ++ A +AG
Sbjct: 556 ACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAG 594
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I+ Y Q A + ++ ++ P TY +L+ A+C +G + +A + M
Sbjct: 410 MIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESG 469
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
PP+ Y IDG +K G+ + A E + MK +PS TY ++++ +A + A
Sbjct: 470 DCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRA 529
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +EM PN +YT L+ +A G A + F +++ G++PDV AY +L++A
Sbjct: 530 ASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKA 589
Query: 304 YRLISRMH-----------MGCEPDRASYNIMVDAYGRAG 332
RM G + YNI++D + + G
Sbjct: 590 CCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRG 629
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
PT +Y L+ Y G ++KA + EM G+ + Y+ IDG ++ G+ A +
Sbjct: 368 PTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSV 427
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
F+ M +P TY +++N + K + AL+L M S C P + TYT +++ F +
Sbjct: 428 FEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMK 487
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHMGCEPDRASYNIMVDAYGRA 331
G A E ++ AG P YN +M +M DRA+ ++D A
Sbjct: 488 IGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQM------DRAAS--IIDEMVVA 539
Query: 332 GLHEGKCSY-SLVE 344
G+H + SY +L+E
Sbjct: 540 GVHPNERSYTTLIE 553
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P YA LLKA C +G ++ A+ EM G+P + +YN +DG + G+ +A +I
Sbjct: 578 PDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDI 637
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
Q+M+ + P +YT IN KA A + +M+ +PN+ YT L++ +A
Sbjct: 638 MQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWAS 697
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR 309
E+A +++++ AG+ PD Y+ +M + L+SR
Sbjct: 698 ASYPEKALICYDEMKSAGMIPDKPLYHCIMTS--LLSR 733
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 49/258 (18%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
++I YG+ + AE + L + Y ++ AYC +G +E+AEA+ M +
Sbjct: 267 VIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQ 326
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK---RDCCQPSTETYTLMINLYGKASKS 240
GL + +YN +DG + K + +F+R+K P+ +Y +INLY K K
Sbjct: 327 GLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKM 386
Query: 241 FMALKLFNEMRSHKCK-----------------------------------PNICTYTAL 265
AL++ NEM K P+ TY L
Sbjct: 387 DKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNIL 446
Query: 266 VNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLISRMHM-----------GC 314
+NAF + G A E+ +++ P + Y +++ + I + M G
Sbjct: 447 MNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGF 506
Query: 315 EPDRASYNIMVDAYGRAG 332
P A+YN+++ +AG
Sbjct: 507 RPSAATYNVIMHGLAQAG 524
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 46/258 (17%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
+L+ A+ + +A + C PT TY +++ + G L A R+M+
Sbjct: 445 ILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMA 504
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G PSA YN + GL + G +A I M P+ +YT +I Y +A
Sbjct: 505 GFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLA 564
Query: 244 LKLFNEMRSHKCKPNICTYTALVNA----------------------------------- 268
K FN ++ KP++ Y +L+ A
Sbjct: 565 FKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDG 624
Query: 269 FAREGLCEEAEEIFEQLQGAGIEPDVYAYNA----------LMEAYRLISRM-HMGCEPD 317
+A+ G EA +I ++++ G+ PD+++Y + +++A I +M G +P+
Sbjct: 625 WAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPN 684
Query: 318 RASYNIMVDAYGRAGLHE 335
+Y ++ + A E
Sbjct: 685 LQAYTTLIHGWASASYPE 702
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 16/214 (7%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P + + LL+ Y G A A F MR G+ P+ Y + I + + A+
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ M+ + P+ TY+++I+ YG+ A + F S N Y +++A+ +
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY--------------RLISRMHMGCEPD 317
G E AE I ++ G+E + YN LM+ Y RL +R G P
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPT 369
Query: 318 RASYNIMVDAYGRAGLHEG--KCSYSLVELSVKH 349
SY +++ Y + G + + S + + +KH
Sbjct: 370 VVSYGCLINLYSKLGKMDKALQISNEMEDQGIKH 403
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 14/223 (6%)
Query: 124 LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LL+ YG++ A + + + P +Y L+ AY ++ L A A EM
Sbjct: 197 LLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAE 256
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
G+ P+A Y+ I G + G+ + A FQR + + Y +I+ Y KA A
Sbjct: 257 GVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERA 316
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQG---AGIEPDVYAYNAL 300
+ M + + Y L++ + ++ +F +L+ G+ P V +Y L
Sbjct: 317 EAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCL 376
Query: 301 MEAYRLISRM-----------HMGCEPDRASYNIMVDAYGRAG 332
+ Y + +M G + +R +Y++++D Y + G
Sbjct: 377 INLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG 419
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 204 NPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYT 263
+ +K V+ F+R+K+ P +TL++N YGK A F MR+ +PN+ +YT
Sbjct: 176 DARKVVDAFKRIKK----PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYT 231
Query: 264 ALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY 304
L++A+A A E+++ G+ P+ Y+ ++ Y
Sbjct: 232 NLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGY 272
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
+I + ++ L +A + C P +Y ++LK C + AE + +M + G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
P + + +N+ I+ L K G ++A+E+ ++M + C P +Y+ +I+ GKA K+ AL
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM--- 301
+L N M + PN Y+++ +A +REG + ++F+ +Q I D YNA++
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587
Query: 302 ----EAYRLIS----RMHMGCEPDRASYNIMVDAYGRAGL 333
E R I + GC P+ ++Y I++ G
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGF 627
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 123/271 (45%), Gaps = 26/271 (9%)
Query: 91 PTHATWDDLINVSVQLR---LNKKW-------DPIVLMSCVSIL-----LIEAYGQKSLH 135
P+ D+++ + L+ + K+W + +V M+C + LI + L
Sbjct: 219 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 278
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++ ++++ C P YA ++ C G LE A + M YGL P+ V YN+
Sbjct: 279 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 338
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
+ GL ++ E+ M C T+ ++++ + + ++L +M C
Sbjct: 339 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGC 398
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
P++ TYT ++N F +EGL +EA + + + G +P+ +Y ++ +A
Sbjct: 399 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 458
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAGLHE 335
L+S+M GC + ++N +++ + GL E
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 136 KKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSY 195
++ E E+ D C + T+ +L+ +C +GL+++ + +M + G P + Y +
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTV 408
Query: 196 IDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKC 255
I+G K G +AV + + M C+P+T +YT+++ A + A L ++M C
Sbjct: 409 INGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGC 468
Query: 256 KPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYR 305
N T+ L+N ++GL E+A E+ +Q+ G PD+ +Y+ ++ EA
Sbjct: 469 PLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALE 528
Query: 306 LISRM-HMGCEPDRASYNIMVDAYGRAG 332
L++ M + G P+ Y+ + A R G
Sbjct: 529 LLNVMVNKGMSPNTIIYSSIASALSREG 556
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 14/190 (7%)
Query: 157 YALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMK 216
Y ++ YC +G LE A R +PP+A Y + L G A+ + M
Sbjct: 93 YNAMVAGYCRAGQLESAR---RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 217 RDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCE 276
R C P Y +++ + A+++ ++ + C ++ ++NA +G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 277 EAEEIFEQLQGAGIEPDVYAYNALMEAYRLISR-----------MHMGCEPDRASYNIMV 325
EA + L G EPDV +YNA+++ + R + M C P+ ++N ++
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 326 DAYGRAGLHE 335
R GL E
Sbjct: 270 SYLCRNGLFE 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 11/187 (5%)
Query: 150 CIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAV 209
C P Y ++L+A C G A V ++ G N ++ + G+ +A+
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212
Query: 210 EIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAF 269
+ + + C+P +Y ++ A + +L EM C PNI T+ L++
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Query: 270 AREGLCEEAEEIFEQLQGAGIEPDVYAYNALME----------AYRLISRM-HMGCEPDR 318
R GL E E+ Q+ G PD+ Y +++ A+ +++RM G +P+
Sbjct: 273 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 332
Query: 319 ASYNIMV 325
YN ++
Sbjct: 333 VCYNTLL 339
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 11/192 (5%)
Query: 152 PTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEI 211
P TY +++A C G + A AV EM + G P +Y+ ++ +GG + AV +
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179
Query: 212 FQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFAR 271
+ + C L++N AL L ++ S C+P++ +Y A++
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 272 EGLCEEAEEIFEQLQGAGIEPDVYAYNALMEAY---RLISRMH--------MGCEPDRAS 320
+E+ E++ P++ +N L+ L R+H GC PD
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 299
Query: 321 YNIMVDAYGRAG 332
Y ++D + G
Sbjct: 300 YATIIDGICKEG 311
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI +K L ++A ++L + C P +Y+ ++ +G ++A + M G
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
+ P+ ++Y+S L + G K +++F ++ + Y +I+ K ++ A+
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAG 289
+ M S C PN TYT L+ A EG +EA+E+ +L G
Sbjct: 598 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 142 YLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLK 201
Y E+L+ P+ + +L+ +C G + A+ VF + K+ L PS V +N+ ++G ++
Sbjct: 124 YKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIR 183
Query: 202 GGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICT 261
G+ + + M QP TY+++IN K SK A ++ NEM + PN T
Sbjct: 184 LGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVT 243
Query: 262 YTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALM----------EAYRLISRMH 311
+T L++ + G + A EI++Q+ G PD+ YN L+ +A L+ M
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMI 303
Query: 312 M-GCEPDRASYNIMVDAYGRAG 332
M G +PD+ +Y ++D + G
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEG 325
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 70 LRFVQREVDSNTIWDAFDSLPPTHATWDDLINVSVQL-RLNKKWDPIVLMSCVSI----- 123
+R Q D+ T W SL P+ +++ L+N ++L L++ + M +
Sbjct: 152 MRLAQMVFDAITKW----SLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVY 207
Query: 124 ---LLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREM 180
+LI ++S +A E+LD+ +P T+ L+ +C +G ++ A ++++M
Sbjct: 208 TYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQM 267
Query: 181 RKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKS 240
G P + YN+ I GL + G+ +A ++ + M +P TYT +I+ K
Sbjct: 268 LSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 241 FMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNAL 300
+ +L M + + TYTAL++ REG +AE++ ++ G++PD Y +
Sbjct: 328 EITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMI 387
Query: 301 MEAY 304
M +
Sbjct: 388 MNEF 391
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 125 LIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYG 184
LI+ + + A Y ++L +P TY L+ C G L +A + EM G
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKG 306
Query: 185 LPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMAL 244
L P + Y + IDG K G+ + E+ +RM R+ + TYT +I+ + ++ A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAE 366
Query: 245 KLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDV 294
K+ EM + KP+ TYT ++N F + G + A ++ ++Q G P V
Sbjct: 367 KMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGV 416
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 126/250 (50%), Gaps = 17/250 (6%)
Query: 96 WDDLINVSVQLRLNKKWDPIVLMSCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIP-TE 154
+DD V + N +P + + I ++ G+ + K + Y E ++ + + +
Sbjct: 274 YDDACKVYEAMETNNV-NPDHVTCSIMITVMRKIGRSA---KDSWDYFEKMNQKGVKWSS 329
Query: 155 DTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQR 214
+ L+K++C GL +A + EM K G+ + ++YN+ +D K ++A +F
Sbjct: 330 EVLGALIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAE 389
Query: 215 MKRDCCQPSTETYTLMINLYGKASKSFMALKLFNEMRSHKCKPNICTYTALVNAFARE-G 273
MK +P++ ++ +++N Y + + + KL EM+ +PN+ +YT L++A+ R+
Sbjct: 390 MKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKK 449
Query: 274 LCEEAEEIFEQLQGAGIEPDVYAYNALMEAYRLI-----------SRMHMGCEPDRASYN 322
+ + A + F +++ GI P ++Y AL+ AY + + + G +P +Y
Sbjct: 450 MSDMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYT 509
Query: 323 IMVDAYGRAG 332
++DA+ RAG
Sbjct: 510 TLLDAFRRAG 519
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 59/324 (18%)
Query: 70 LRFVQREVDSNTIWDAFDS--LPPTHATWDDLINVSVQLRLNKK--WDPIVLM------- 118
L +R D+ +++A ++ + P H T +I V ++ + K WD M
Sbjct: 268 LMVCKRYDDACKVYEAMETNNVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKW 327
Query: 119 -SCVSILLIEAYGQKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVF 177
S V LI+++ + L +A LE+ Y ++ A+ S +E+AE VF
Sbjct: 328 SSEVLGALIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVF 387
Query: 178 REMRKYGLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKA 237
EM+ G+ P++ +N ++ + P+ ++ MK +P+ ++YT +I+ YG+
Sbjct: 388 AEMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQ 447
Query: 238 SK-SFMALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYA 296
K S MA F M+ + +P +YTAL++A++ G E+A FE + G++P +
Sbjct: 448 KKMSDMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAFENMLREGLKPSIET 507
Query: 297 YNALMEAYR---------------------------------------------LISRM- 310
Y L++A+R +IS
Sbjct: 508 YTTLLDAFRRAGDTVSLMKIWKLMIREKVLGTRVTFNTLLDGFAKHGHYVEARDVISEFD 567
Query: 311 HMGCEPDRASYNIMVDAYGRAGLH 334
+G +P +YN++++AY R G H
Sbjct: 568 KIGLQPTVMTYNMLMNAYARGGQH 591
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 125 LIEAYG-QKSLHKKAEFTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKY 183
LI AYG QK + A +L + + PT +Y L+ AY +SG EKA + F M +
Sbjct: 440 LISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSYTALIHAYSVSGWHEKAYSAFENMLRE 499
Query: 184 GLPPSAVVYNSYIDGLLKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLYGKASKSFMA 243
GL PS Y + +D + G+ ++I++ M R+ + T+ +++ + K A
Sbjct: 500 GLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIREKVLGTRVTFNTLLDGFAKHGHYVEA 559
Query: 244 LKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFEQLQGAGIEPDVYAYNALMEA 303
+ +E +P + TY L+NA+AR G + ++ +++ ++PD Y+ ++ A
Sbjct: 560 RDVISEFDKIGLQPTVMTYNMLMNAYARGGQHLKLPQLLQEMAARDLKPDSVTYSTMIYA 619
Query: 304 Y 304
+
Sbjct: 620 F 620
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 48/238 (20%)
Query: 140 FTYLELLDSRCIPTEDTYALLLKAYCMSGLLEKAEAVFREMRKYGLPPSAVVYNSYIDGL 199
F ++ L ++ + T Y+LL +G+ EK +F+ + VYNS I GL
Sbjct: 210 FEWMGLQETSLV-TSRAYSLLFPLLGRAGMGEKIMVLFKNLPLKKEFQDVHVYNSAISGL 268
Query: 200 LKGGNPQKAVEIFQRMKRDCCQPSTETYTLMINLY------------------------- 234
+ A ++++ M+ + P T ++MI +
Sbjct: 269 MVCKRYDDACKVYEAMETNNVNPDHVTCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWS 328
Query: 235 ----GKASKSF-------MALKLFNEMRSHKCKPNICTYTALVNAFAREGLCEEAEEIFE 283
G KSF AL L EM N+ Y +++AF++ EEAE +F
Sbjct: 329 SEVLGALIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFA 388
Query: 284 QLQGAGIEPDVYAYNALMEAYR-----------LISRMHMGCEPDRASYNIMVDAYGR 330
+++ G++P ++N LM AY L+ MG EP+ SY ++ AYGR
Sbjct: 389 EMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGR 446
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,418,616,669
Number of Sequences: 23463169
Number of extensions: 218011718
Number of successful extensions: 595014
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7286
Number of HSP's successfully gapped in prelim test: 4865
Number of HSP's that attempted gapping in prelim test: 462831
Number of HSP's gapped (non-prelim): 73132
length of query: 352
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 209
effective length of database: 9,003,962,200
effective search space: 1881828099800
effective search space used: 1881828099800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)