Query 045387
Match_columns 242
No_of_seqs 212 out of 1548
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 22:38:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gv2_A C-MYB, MYB proto-oncoge 100.0 1E-34 3.6E-39 225.0 9.3 104 11-115 1-104 (105)
2 3zqc_A MYB3; transcription-DNA 100.0 4.2E-34 1.4E-38 230.3 10.1 107 14-121 2-108 (131)
3 1h8a_C AMV V-MYB, MYB transfor 100.0 2.5E-34 8.7E-39 230.4 8.4 112 3-115 16-127 (128)
4 2k9n_A MYB24; R2R3 domain, DNA 100.0 2.1E-34 7.2E-39 224.6 7.2 104 14-118 1-104 (107)
5 1h89_C C-MYB, MYB proto-oncoge 100.0 8.9E-35 3.1E-39 240.9 3.7 137 11-151 3-140 (159)
6 3osg_A MYB21; transcription-DN 100.0 1.2E-33 4.2E-38 226.3 9.0 106 8-115 5-110 (126)
7 1h89_C C-MYB, MYB proto-oncoge 100.0 6.8E-32 2.3E-36 223.5 6.9 109 6-115 50-158 (159)
8 1h8a_C AMV V-MYB, MYB transfor 99.9 1E-25 3.5E-30 180.3 3.4 108 40-151 1-109 (128)
9 2dim_A Cell division cycle 5-l 99.9 4.9E-23 1.7E-27 148.9 1.7 68 7-75 2-69 (70)
10 1ign_A Protein (RAP1); RAP1,ye 99.7 1.4E-18 4.8E-23 151.8 6.2 106 9-115 3-200 (246)
11 2juh_A Telomere binding protei 99.7 8.1E-19 2.8E-23 139.6 3.1 83 8-91 11-103 (121)
12 2llk_A Cyclin-D-binding MYB-li 99.7 1.8E-18 6.2E-23 126.3 4.2 58 54-112 10-67 (73)
13 2d9a_A B-MYB, MYB-related prot 99.7 2.8E-18 9.6E-23 120.2 3.4 57 9-66 3-59 (60)
14 2din_A Cell division cycle 5-l 99.7 1.4E-17 4.6E-22 118.9 6.4 60 60-120 2-61 (66)
15 2dim_A Cell division cycle 5-l 99.7 8.5E-18 2.9E-22 121.2 5.3 63 62-124 4-67 (70)
16 2cu7_A KIAA1915 protein; nucle 99.7 1.5E-17 5E-22 120.8 6.2 65 61-126 3-67 (72)
17 1gvd_A MYB proto-oncogene prot 99.7 4.3E-18 1.5E-22 115.9 3.2 52 12-64 1-52 (52)
18 2roh_A RTBP1, telomere binding 99.7 5.9E-18 2E-22 134.8 4.1 79 9-88 26-114 (122)
19 1guu_A C-MYB, MYB proto-oncoge 99.7 6.2E-18 2.1E-22 115.1 2.0 52 12-64 1-52 (52)
20 3osg_A MYB21; transcription-DN 99.7 1.7E-17 5.8E-22 132.4 4.2 89 62-153 6-94 (126)
21 1gv2_A C-MYB, MYB proto-oncoge 99.7 1.6E-17 5.3E-22 128.2 3.4 85 64-151 1-86 (105)
22 1ity_A TRF1; helix-turn-helix, 99.7 1.4E-17 4.9E-22 119.8 2.5 65 7-71 3-68 (69)
23 2d9a_A B-MYB, MYB-related prot 99.7 4E-17 1.4E-21 114.3 4.4 55 62-116 3-58 (60)
24 1guu_A C-MYB, MYB proto-oncoge 99.6 1.5E-16 5E-21 108.2 5.4 50 65-114 1-51 (52)
25 1ity_A TRF1; helix-turn-helix, 99.6 2.7E-16 9.2E-21 113.1 6.2 61 60-120 3-66 (69)
26 3zqc_A MYB3; transcription-DNA 99.6 1.2E-16 4.2E-21 128.1 4.8 84 67-153 2-86 (131)
27 2k9n_A MYB24; R2R3 domain, DNA 99.6 4.6E-17 1.6E-21 126.3 2.2 80 67-149 1-81 (107)
28 1gvd_A MYB proto-oncogene prot 99.6 2.6E-16 8.8E-21 107.1 5.5 50 65-114 1-51 (52)
29 3sjm_A Telomeric repeat-bindin 99.6 6.3E-17 2.2E-21 115.2 1.7 57 10-66 7-64 (64)
30 1x41_A Transcriptional adaptor 99.6 1.2E-16 4E-21 112.2 2.4 56 9-65 3-58 (60)
31 1w0t_A Telomeric repeat bindin 99.6 9.5E-16 3.2E-20 104.8 5.4 49 66-114 1-52 (53)
32 1x41_A Transcriptional adaptor 99.6 1E-15 3.4E-20 107.3 4.9 53 62-114 3-56 (60)
33 1w0t_A Telomeric repeat bindin 99.6 4E-16 1.4E-20 106.6 1.6 50 13-62 1-51 (53)
34 2din_A Cell division cycle 5-l 99.6 1.5E-16 5E-21 113.5 -0.6 59 7-68 2-60 (66)
35 2yum_A ZZZ3 protein, zinc fing 99.6 3.4E-16 1.2E-20 114.1 0.6 61 8-69 2-67 (75)
36 3sjm_A Telomeric repeat-bindin 99.6 2.6E-15 8.9E-20 106.8 5.0 52 65-116 9-63 (64)
37 2yum_A ZZZ3 protein, zinc fing 99.6 2.4E-15 8.3E-20 109.6 4.6 58 62-119 3-66 (75)
38 2elk_A SPCC24B10.08C protein; 99.6 9.6E-16 3.3E-20 106.9 2.2 52 10-61 5-56 (58)
39 2elk_A SPCC24B10.08C protein; 99.5 7.9E-15 2.7E-19 102.2 5.4 50 63-112 5-56 (58)
40 2cu7_A KIAA1915 protein; nucle 99.5 1.4E-15 5E-20 110.2 0.9 59 7-67 2-60 (72)
41 2ltp_A Nuclear receptor corepr 99.2 1.7E-15 6E-20 114.3 0.0 56 60-115 9-64 (89)
42 2aje_A Telomere repeat-binding 99.5 9.8E-15 3.4E-19 113.4 3.9 84 4-87 3-95 (105)
43 2juh_A Telomere binding protei 99.5 9E-15 3.1E-19 116.2 3.0 84 61-146 11-104 (121)
44 2llk_A Cyclin-D-binding MYB-li 99.5 1.4E-14 4.7E-19 105.7 2.5 61 2-66 11-71 (73)
45 2ckx_A NGTRF1, telomere bindin 99.4 3.4E-14 1.2E-18 106.0 3.9 69 15-84 1-79 (83)
46 2yus_A SWI/SNF-related matrix- 99.4 4.5E-14 1.5E-18 104.5 3.2 54 5-60 9-62 (79)
47 2cqr_A RSGI RUH-043, DNAJ homo 99.4 2.5E-13 8.7E-18 99.0 5.4 51 63-113 14-68 (73)
48 2ckx_A NGTRF1, telomere bindin 99.4 5.1E-13 1.7E-17 99.7 5.9 68 68-136 1-77 (83)
49 2aje_A Telomere repeat-binding 99.4 6.6E-13 2.3E-17 103.1 6.5 76 63-140 9-94 (105)
50 2roh_A RTBP1, telomere binding 99.4 3.9E-13 1.3E-17 106.9 4.9 78 63-143 27-115 (122)
51 2yus_A SWI/SNF-related matrix- 99.3 4.1E-13 1.4E-17 99.2 3.7 48 64-111 15-62 (79)
52 2cqr_A RSGI RUH-043, DNAJ homo 99.3 1.9E-13 6.5E-18 99.7 1.7 57 5-62 9-68 (73)
53 2ltp_A Nuclear receptor corepr 99.0 9.1E-14 3.1E-18 104.8 0.0 57 5-63 7-63 (89)
54 1ign_A Protein (RAP1); RAP1,ye 99.3 5.7E-13 1.9E-17 116.5 3.7 78 63-147 4-87 (246)
55 1x58_A Hypothetical protein 49 99.3 3.8E-12 1.3E-16 89.7 5.8 50 65-114 6-58 (62)
56 2cjj_A Radialis; plant develop 99.2 9.8E-12 3.4E-16 94.6 5.8 59 66-124 7-70 (93)
57 2cjj_A Radialis; plant develop 99.0 4.7E-11 1.6E-15 90.8 0.6 48 13-61 7-57 (93)
58 2eqr_A N-COR1, N-COR, nuclear 99.0 5.8E-10 2E-14 78.2 5.0 47 66-112 11-57 (61)
59 3hm5_A DNA methyltransferase 1 98.9 1.5E-09 5E-14 82.4 5.5 66 51-120 18-88 (93)
60 2cqq_A RSGI RUH-037, DNAJ homo 98.9 1.4E-09 4.9E-14 78.8 4.7 59 64-123 5-67 (72)
61 1x58_A Hypothetical protein 49 98.9 6.8E-10 2.3E-14 78.1 2.0 49 12-62 6-57 (62)
62 2eqr_A N-COR1, N-COR, nuclear 98.9 1.2E-09 4E-14 76.6 3.2 53 6-60 4-56 (61)
63 2iw5_B Protein corest, REST co 98.7 1.2E-08 4.2E-13 88.4 5.6 49 66-114 132-180 (235)
64 2cqq_A RSGI RUH-037, DNAJ homo 98.5 1.5E-08 5E-13 73.5 1.0 51 10-62 4-57 (72)
65 2xag_B REST corepressor 1; ami 98.5 7.5E-08 2.6E-12 91.8 4.3 45 68-112 381-425 (482)
66 1wgx_A KIAA1903 protein; MYB D 98.5 1.7E-07 5.8E-12 68.1 4.9 48 66-113 7-58 (73)
67 1fex_A TRF2-interacting telome 98.4 1.6E-07 5.4E-12 65.4 4.2 47 67-113 2-58 (59)
68 1wgx_A KIAA1903 protein; MYB D 98.4 5.6E-08 1.9E-12 70.6 1.3 48 14-62 8-58 (73)
69 1fex_A TRF2-interacting telome 98.4 5.1E-08 1.7E-12 68.0 0.9 48 14-62 2-58 (59)
70 2iw5_B Protein corest, REST co 98.3 1.3E-07 4.4E-12 82.1 2.4 51 10-62 129-179 (235)
71 2yqk_A Arginine-glutamic acid 98.1 5.4E-06 1.9E-10 58.2 6.0 50 62-111 4-54 (63)
72 1ofc_X ISWI protein; nuclear p 98.1 5.8E-06 2E-10 74.8 6.8 100 15-115 111-276 (304)
73 4eef_G F-HB80.4, designed hema 98.0 1E-06 3.5E-11 63.8 0.7 44 14-58 20-66 (74)
74 4eef_G F-HB80.4, designed hema 98.0 1.6E-06 5.4E-11 62.8 1.2 43 67-109 20-66 (74)
75 2yqk_A Arginine-glutamic acid 97.9 6.2E-06 2.1E-10 57.9 3.3 51 7-59 2-53 (63)
76 1ug2_A 2610100B20RIK gene prod 97.8 1.5E-05 5E-10 59.9 4.4 48 68-115 34-84 (95)
77 2lr8_A CAsp8-associated protei 96.9 4.1E-06 1.4E-10 59.7 0.0 44 69-113 16-62 (70)
78 4iej_A DNA methyltransferase 1 97.7 7E-05 2.4E-09 56.6 6.1 59 56-118 23-86 (93)
79 2crg_A Metastasis associated p 97.6 9.7E-05 3.3E-09 52.8 5.5 44 67-110 8-52 (70)
80 4a69_C Nuclear receptor corepr 97.6 8.8E-05 3E-09 56.0 5.1 45 67-111 43-87 (94)
81 2xag_B REST corepressor 1; ami 97.5 3.2E-05 1.1E-09 73.8 2.3 48 11-60 377-424 (482)
82 3hm5_A DNA methyltransferase 1 97.4 1.1E-05 3.9E-10 60.9 -1.2 49 13-62 29-81 (93)
83 2crg_A Metastasis associated p 97.3 0.00011 3.6E-09 52.6 2.1 45 13-59 7-52 (70)
84 4a69_C Nuclear receptor corepr 97.2 0.0001 3.5E-09 55.7 2.1 43 14-58 43-85 (94)
85 2ebi_A DNA binding protein GT- 97.1 0.00032 1.1E-08 51.5 3.5 49 67-115 4-66 (86)
86 4b4c_A Chromodomain-helicase-D 96.9 0.00097 3.3E-08 56.3 5.1 103 10-113 3-195 (211)
87 2y9y_A Imitation switch protei 96.7 0.0031 1.1E-07 58.4 7.2 104 15-118 124-295 (374)
88 2ebi_A DNA binding protein GT- 96.6 0.00016 5.5E-09 53.2 -1.8 49 13-61 3-63 (86)
89 2lr8_A CAsp8-associated protei 95.2 0.00075 2.6E-08 48.0 0.0 48 13-62 13-62 (70)
90 1ug2_A 2610100B20RIK gene prod 96.1 0.0016 5.5E-08 48.8 1.3 48 12-60 31-80 (95)
91 4b4c_A Chromodomain-helicase-D 95.7 0.0083 2.8E-07 50.5 4.3 39 5-43 125-163 (211)
92 1irz_A ARR10-B; helix-turn-hel 94.9 0.047 1.6E-06 38.3 5.3 48 65-112 5-57 (64)
93 4iej_A DNA methyltransferase 1 94.1 0.016 5.5E-07 43.6 1.4 49 12-61 28-80 (93)
94 2xb0_X Chromo domain-containin 93.6 0.056 1.9E-06 47.9 4.2 29 14-42 168-196 (270)
95 1ofc_X ISWI protein; nuclear p 92.6 0.2 6.9E-06 45.1 6.3 46 68-113 111-157 (304)
96 2xb0_X Chromo domain-containin 88.8 0.26 8.8E-06 43.7 3.3 27 68-94 169-196 (270)
97 1irz_A ARR10-B; helix-turn-hel 84.8 0.39 1.3E-05 33.5 1.7 48 12-60 5-56 (64)
98 2y9y_A Imitation switch protei 71.0 2.2 7.5E-05 39.4 2.7 32 13-44 227-261 (374)
99 2rq5_A Protein jumonji; develo 69.3 1.2 4.2E-05 34.6 0.6 56 25-83 47-113 (121)
100 3cz6_A DNA-binding protein RAP 61.5 6.7 0.00023 32.1 3.6 25 10-34 110-142 (168)
101 2o8x_A Probable RNA polymerase 52.1 10 0.00036 24.8 2.8 44 70-115 16-59 (70)
102 2li6_A SWI/SNF chromatin-remod 50.8 2.2 7.6E-05 32.6 -0.9 39 24-63 53-98 (116)
103 1ku3_A Sigma factor SIGA; heli 49.1 12 0.00042 25.1 2.8 44 70-115 11-58 (73)
104 1u78_A TC3 transposase, transp 46.7 66 0.0023 23.5 7.0 86 16-108 6-100 (141)
105 2jrz_A Histone demethylase jar 45.4 3.6 0.00012 31.5 -0.5 40 24-63 44-93 (117)
106 3hug_A RNA polymerase sigma fa 45.0 18 0.00063 25.4 3.4 40 74-114 41-80 (92)
107 3cz6_A DNA-binding protein RAP 44.2 20 0.00067 29.4 3.7 27 53-79 99-126 (168)
108 1ig6_A MRF-2, modulator recogn 43.9 4 0.00014 30.5 -0.5 40 24-63 37-87 (107)
109 2lm1_A Lysine-specific demethy 43.9 27 0.00094 25.7 4.3 39 77-115 48-98 (107)
110 1c20_A DEAD ringer protein; DN 42.9 3.7 0.00013 31.8 -0.8 40 24-63 56-106 (128)
111 2li6_A SWI/SNF chromatin-remod 42.6 12 0.00042 28.3 2.1 38 78-115 54-99 (116)
112 2jrz_A Histone demethylase jar 42.3 26 0.00089 26.5 4.0 39 77-115 44-94 (117)
113 2p7v_B Sigma-70, RNA polymeras 40.7 15 0.00051 24.3 2.1 41 74-115 9-53 (68)
114 2p1m_A SKP1-like protein 1A; F 39.8 12 0.0004 29.8 1.7 35 38-80 119-153 (160)
115 2jxj_A Histone demethylase jar 37.0 4.9 0.00017 29.3 -0.9 40 24-63 40-89 (96)
116 2cxy_A BAF250B subunit, HBAF25 37.0 35 0.0012 26.0 4.0 39 77-115 55-105 (125)
117 2eqy_A RBP2 like, jumonji, at 36.7 37 0.0013 25.9 4.1 39 77-115 46-96 (122)
118 1kkx_A Transcription regulator 35.6 18 0.00061 27.9 2.1 40 78-117 53-100 (123)
119 2q1z_A RPOE, ECF SIGE; ECF sig 34.7 37 0.0013 26.1 3.9 31 84-115 149-179 (184)
120 2k27_A Paired box protein PAX- 34.3 1.3E+02 0.0045 22.8 7.1 67 14-85 23-99 (159)
121 2jvw_A Uncharacterized protein 33.0 8.1 0.00028 28.3 -0.3 45 22-79 18-69 (88)
122 2yqf_A Ankyrin-1; death domain 32.5 45 0.0015 24.7 3.9 35 71-106 14-48 (111)
123 1c20_A DEAD ringer protein; DN 32.4 47 0.0016 25.3 4.1 39 77-115 56-107 (128)
124 2kk0_A AT-rich interactive dom 26.9 57 0.0019 25.6 3.7 39 77-115 68-119 (145)
125 3ulq_B Transcriptional regulat 26.6 83 0.0029 22.2 4.3 47 66-115 26-72 (90)
126 1or7_A Sigma-24, RNA polymeras 26.5 55 0.0019 25.3 3.6 29 85-114 155-183 (194)
127 1x3u_A Transcriptional regulat 26.0 81 0.0028 20.8 4.0 42 70-114 17-58 (79)
128 1tty_A Sigma-A, RNA polymerase 25.4 49 0.0017 22.9 2.8 41 74-115 22-66 (87)
129 3v7d_A Suppressor of kinetocho 25.0 18 0.00061 29.1 0.4 35 37-79 126-160 (169)
130 2of5_H Leucine-rich repeat and 23.8 46 0.0016 25.0 2.6 31 75-106 13-43 (118)
131 3c57_A Two component transcrip 23.5 85 0.0029 22.1 3.9 44 69-115 27-70 (95)
132 1wxp_A THO complex subunit 1; 23.1 84 0.0029 23.1 3.9 31 75-106 18-48 (110)
133 2o71_A Death domain-containing 22.7 62 0.0021 24.4 3.1 37 65-105 17-53 (115)
134 2jpc_A SSRB; DNA binding prote 22.6 1E+02 0.0035 19.2 3.8 39 75-115 3-41 (61)
135 2xsa_A Ogoga, hyaluronoglucosa 22.4 2E+02 0.0068 26.9 7.0 59 11-84 8-66 (447)
136 1xsv_A Hypothetical UPF0122 pr 22.1 79 0.0027 23.3 3.5 40 74-114 29-68 (113)
137 2of5_A Death domain-containing 21.9 59 0.002 24.5 2.8 38 64-105 16-53 (114)
138 2ba3_A NIKA; dimer, bacterial 21.5 41 0.0014 21.1 1.6 34 1-34 4-39 (51)
139 1k78_A Paired box protein PAX5 21.3 1.4E+02 0.005 22.2 5.1 40 67-108 30-69 (149)
140 1fse_A GERE; helix-turn-helix 21.1 1.1E+02 0.0039 19.6 3.9 45 68-115 10-54 (74)
141 1je8_A Nitrate/nitrite respons 21.1 83 0.0028 21.5 3.3 43 69-114 21-63 (82)
142 2ast_A S-phase kinase-associat 20.9 25 0.00086 27.7 0.5 35 38-80 120-154 (159)
No 1
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=100.00 E-value=1e-34 Score=225.00 Aligned_cols=104 Identities=50% Similarity=0.944 Sum_probs=99.5
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHHhCCcch
Q 045387 11 GLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGNKWS 90 (242)
Q Consensus 11 ~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~ 90 (242)
.+++|+||+|||++|+++|.+||.++|..||+.|+ +|++.||++||.++|+|.+++++||+|||.+|+++|.+||++|+
T Consensus 1 ~l~k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~-~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~ 79 (105)
T 1gv2_A 1 ELIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWA 79 (105)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHCTTCHHHHHTTST-TCCHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHHHHHSSCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCcHHHHhhhhc-CCCHHHHHHHHHhccCCcccccCCCHHHHHHHHHHHHHhCCCHH
Confidence 47899999999999999999999889999999998 99999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 91 AIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 91 ~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
.||+.|||||+++|++||+.++++.
T Consensus 80 ~Ia~~l~gRt~~~~k~rw~~~~~~~ 104 (105)
T 1gv2_A 80 EIAKLLPGRTDNAIKNHWNSTMRRK 104 (105)
T ss_dssp HHHTTCTTCCHHHHHHHHHHHTC--
T ss_pred HHHHHcCCCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999998775
No 2
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=100.00 E-value=4.2e-34 Score=230.30 Aligned_cols=107 Identities=39% Similarity=0.727 Sum_probs=103.3
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhc
Q 045387 14 KGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIA 93 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA 93 (242)
||+||+|||++|+++|..||.++|..||..|+ +|++.||++||.++|+|.+++|+||+|||++|+++|.+||++|+.||
T Consensus 2 Kg~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~~Ia 80 (131)
T 3zqc_A 2 KGPFTEAEDDLIREYVKENGPQNWPRITSFLP-NRSPKQCRERWFNHLDPAVVKHAWTPEEDETIFRNYLKLGSKWSVIA 80 (131)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSCCGGGGTTSCT-TSCHHHHHHHHHHHTSTTCCCSCCCHHHHHHHHHHHHHSCSCHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCcCCHHHHHHHHC-CCCHHHHHHHHhhccCccccCCCCCHHHHHHHHHHHHHHCcCHHHHH
Confidence 79999999999999999999889999999998 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHhhhhHHHhCCC
Q 045387 94 SRLPGRTDNEIKNYWNTHIKKKLLRMGI 121 (242)
Q Consensus 94 ~~lpgRT~~q~k~rW~~~l~k~~~k~~~ 121 (242)
+.|||||+++|++||++++++.+....+
T Consensus 81 ~~l~gRt~~~~k~rw~~~l~~~~~~~~~ 108 (131)
T 3zqc_A 81 KLIPGRTDNAIKNRWNSSISKRISTNSN 108 (131)
T ss_dssp TTSTTCCHHHHHHHHHHTTGGGCCCCTT
T ss_pred HHcCCCCHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999998877543
No 3
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=100.00 E-value=2.5e-34 Score=230.45 Aligned_cols=112 Identities=46% Similarity=0.867 Sum_probs=102.8
Q ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHH
Q 045387 3 RPPSSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLH 82 (242)
Q Consensus 3 r~~~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv 82 (242)
|+....+|++++|+||+|||++|+++|.+||.++|..||+.|+ +|++.||++||.++|+|.+++++||+|||.+|+++|
T Consensus 16 Rw~~~l~p~~~k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l~-~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~~~ 94 (128)
T 1h8a_C 16 RWQKVLNPELNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAH 94 (128)
T ss_dssp ------CTTCCCSCCCHHHHHHHHHHHHHTCSCCHHHHHHHSS-SCCHHHHHHHHHHTTCSSSCCSCCCHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhc-CCcHHHHHHHHHHhcccccccccCCHHHHHHHHHHH
Confidence 5566778999999999999999999999999888999999999 999999999999999999999999999999999999
Q ss_pred HHhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 83 KVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 83 ~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
.+||++|+.||+.|||||+++|++||+.++++.
T Consensus 95 ~~~G~~W~~Ia~~l~gRt~~~~k~r~~~~~~~~ 127 (128)
T 1h8a_C 95 KRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRK 127 (128)
T ss_dssp HHHCSCHHHHGGGSTTCCHHHHHHHHHTTTTC-
T ss_pred HHHCcCHHHHHHHCCCCCHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999988765
No 4
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=100.00 E-value=2.1e-34 Score=224.59 Aligned_cols=104 Identities=31% Similarity=0.552 Sum_probs=100.2
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhc
Q 045387 14 KGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIA 93 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA 93 (242)
||+||+|||++|+++|.+||.++|..||..|+ +|++.||++||.++|+|.+++++||+|||.+|+++|.+||++|+.||
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~~~~~~G~~W~~Ia 79 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKDWIRISQLMI-TRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQKYAEYGPKWNKIS 79 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSCHHHHHHHTT-TSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHHHHHHTCSCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHhhhcC-CCCHHHHHHHHHHHHcccccccccCHHHHHHHHHHHHHhCcCHHHHH
Confidence 68999999999999999999889999999999 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHhhhhHHHh
Q 045387 94 SRLPGRTDNEIKNYWNTHIKKKLLR 118 (242)
Q Consensus 94 ~~lpgRT~~q~k~rW~~~l~k~~~k 118 (242)
+.|||||+++|++||+.++++..+.
T Consensus 80 ~~l~gRt~~~~k~rw~~l~r~~~~~ 104 (107)
T 2k9n_A 80 KFLKNRSDNNIRNRWMMIARHRAKH 104 (107)
T ss_dssp HHHSSSCHHHHHHHHHHHHHHHHSS
T ss_pred HHCCCCCHHHHHHHHHHHHhhHHHh
Confidence 9999999999999999999886544
No 5
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=100.00 E-value=8.9e-35 Score=240.87 Aligned_cols=137 Identities=26% Similarity=0.562 Sum_probs=89.6
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHHhCC-cc
Q 045387 11 GLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGN-KW 89 (242)
Q Consensus 11 ~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~-~W 89 (242)
.+++++||+|||++|+++|.+||.++|..||+.|+ +|++.||++||.++|+|.+++++||+|||.+|+++|.+||. +|
T Consensus 3 ~~~k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l~-~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~~v~~~g~~~W 81 (159)
T 1h89_C 3 HLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLP-NRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIKLVQKYGPKRW 81 (159)
T ss_dssp -----------------------------------------CHHHHHHTTTCTTCCCSCCCHHHHHHHHHHHHHHCSCCH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcC-CCCHHHHHHHHHHccCCCcCCCCCChHHHHHHHHHHHHhCcccH
Confidence 37899999999999999999999889999999998 99999999999999999999999999999999999999995 69
Q ss_pred hhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCCCcccchhhhhhhhccCCCCCCCCcccc
Q 045387 90 SAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTHSPRLDLLELSSILSSSLCNSTQLNA 151 (242)
Q Consensus 90 ~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~t~~~~~~ll~~~si~~s~~~~~s~~~~ 151 (242)
..||..|||||+.+|++||.++|++.+.+ .||+.+++..|+++...+|..|..++..-+
T Consensus 82 ~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~---~~WT~eEd~~L~~~~~~~g~~W~~Ia~~l~ 140 (159)
T 1h89_C 82 SVIAKHLKGRIGKQCRERWHNHLNPEVKK---TSWTEEEDRIIYQAHKRLGNRWAEIAKLLP 140 (159)
T ss_dssp HHHHHTSTTCCHHHHHHHHHHTTCTTSCC---SCCCHHHHHHHHHHHHHHCSCHHHHHTTST
T ss_pred HHHHHHcCCCCHHHHHHHHHHHhCccccc---cCCChHHHHHHHHHHHHHCCCHHHHHHHCC
Confidence 99999999999999999999999998877 677999999999999999998887765443
No 6
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=100.00 E-value=1.2e-33 Score=226.30 Aligned_cols=106 Identities=36% Similarity=0.660 Sum_probs=101.1
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 045387 8 DKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGN 87 (242)
Q Consensus 8 ~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~ 87 (242)
.++..++|+||+|||++|+++|.+||. +|..||+.|+ +|++.||++||.++|+|.+++++||+|||++|+++|.+||+
T Consensus 5 ~~~~~kk~~WT~eED~~L~~~v~~~G~-~W~~Ia~~~~-~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~~v~~~G~ 82 (126)
T 3osg_A 5 NLKAAKKQKFTPEEDEMLKRAVAQHGS-DWKMIAATFP-NRNARQCRDRWKNYLAPSISHTPWTAEEDALLVQKIQEYGR 82 (126)
T ss_dssp C-CBCSSCCCCHHHHHHHHHHHHHHTT-CHHHHHHTCT-TCCHHHHHHHHHHHTSTTSCCSCCCHHHHHHHHHHHHHHCS
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhCC-CHHHHHHHcC-CCCHHHHHHHHhhhcccccccccCCHHHHHHHHHHHHHHCc
Confidence 467889999999999999999999997 9999999998 99999999999999999999999999999999999999999
Q ss_pred cchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 88 KWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 88 ~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
+|+.||+.|||||+++|++||..++++.
T Consensus 83 ~W~~Ia~~l~gRt~~~~k~rw~~l~~k~ 110 (126)
T 3osg_A 83 QWAIIAKFFPGRTDIHIKNRWVTISNKL 110 (126)
T ss_dssp CHHHHHTTSTTCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999887664
No 7
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=99.97 E-value=6.8e-32 Score=223.53 Aligned_cols=109 Identities=48% Similarity=0.886 Sum_probs=104.1
Q ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHHh
Q 045387 6 SSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVL 85 (242)
Q Consensus 6 ~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~ 85 (242)
...+|++++|+||+|||++|+++|.+||.++|..||+.|+ +|++.||+.||.++|+|.+++++||+|||.+|++++.+|
T Consensus 50 ~~l~p~~~~~~Wt~eEd~~L~~~v~~~g~~~W~~Ia~~l~-~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~~~~~~ 128 (159)
T 1h89_C 50 KVLNPELIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRL 128 (159)
T ss_dssp TTTCTTCCCSCCCHHHHHHHHHHHHHHCSCCHHHHHHTST-TCCHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHHHH
T ss_pred HccCCCcCCCCCChHHHHHHHHHHHHhCcccHHHHHHHcC-CCCHHHHHHHHHHHhCccccccCCChHHHHHHHHHHHHH
Confidence 3567899999999999999999999999878999999998 999999999999999999999999999999999999999
Q ss_pred CCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 86 GNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 86 G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
|++|+.||+.|||||+++|++||+.+++++
T Consensus 129 g~~W~~Ia~~l~gRt~~~~knr~~~~~r~~ 158 (159)
T 1h89_C 129 GNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 158 (159)
T ss_dssp CSCHHHHHTTSTTCCHHHHHHHHHTTTCC-
T ss_pred CCCHHHHHHHCCCCCHHHHHHHHHHHHhcc
Confidence 999999999999999999999999988765
No 8
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=99.91 E-value=1e-25 Score=180.32 Aligned_cols=108 Identities=21% Similarity=0.484 Sum_probs=79.7
Q ss_pred cccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHHhCC-cchhhcccCCCCCHHHHHHHHHHhhhhHHHh
Q 045387 40 LPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGN-KWSAIASRLPGRTDNEIKNYWNTHIKKKLLR 118 (242)
Q Consensus 40 Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~-~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k 118 (242)
||+.|+ +|++.||+.||.++|+|++++++||+|||++|+++|.+||. +|..||..|||||+.+|++||.++|.+.+++
T Consensus 1 Ia~~~~-~Rt~~qC~~Rw~~~l~p~~~k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~ 79 (128)
T 1h8a_C 1 MEAVIK-NRTDVQCQHRWQKVLNPELNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKGRIGKQCRERWHNHLNPEVKK 79 (128)
T ss_dssp ----------------------CTTCCCSCCCHHHHHHHHHHHHHTCSCCHHHHHHHSSSCCHHHHHHHHHHTTCSSSCC
T ss_pred CccccC-CCCHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhcCCcHHHHHHHHHHhccccccc
Confidence 788898 99999999999999999999999999999999999999995 6999999999999999999999999998877
Q ss_pred CCCCCCCcccchhhhhhhhccCCCCCCCCcccc
Q 045387 119 MGIDPVTHSPRLDLLELSSILSSSLCNSTQLNA 151 (242)
Q Consensus 119 ~~~~p~t~~~~~~ll~~~si~~s~~~~~s~~~~ 151 (242)
++|+.+++..|+.+...+|..|..++..-+
T Consensus 80 ---~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l~ 109 (128)
T 1h8a_C 80 ---TSWTEEEDRIIYQAHKRLGNRWAEIAKLLP 109 (128)
T ss_dssp ---SCCCHHHHHHHHHHHHHHCSCHHHHGGGST
T ss_pred ---ccCCHHHHHHHHHHHHHHCcCHHHHHHHCC
Confidence 677889999999999999998888765443
No 9
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=4.9e-23 Score=148.86 Aligned_cols=68 Identities=28% Similarity=0.578 Sum_probs=65.0
Q ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHH
Q 045387 7 SDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEE 75 (242)
Q Consensus 7 ~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED 75 (242)
+..|.+++|+||+|||++|+++|.+||.++|..||+.|+ +|+++||++||.++|+|.+++++||+|||
T Consensus 2 ss~~~~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l~-~Rt~~qcr~Rw~~~L~p~i~~~~wt~eEd 69 (70)
T 2dim_A 2 SSGSSGKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLH-RKSAKQCKARWYEWLDPSIKKTEWSGPSS 69 (70)
T ss_dssp CSCSCSTTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHST-TCCHHHHHHHHHHTSCSSSCCCCSCCSCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHhc-CCCHHHHHHHHHHHcCCcccCCCCChHhc
Confidence 356889999999999999999999999889999999999 99999999999999999999999999997
No 10
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=99.74 E-value=1.4e-18 Score=151.81 Aligned_cols=106 Identities=21% Similarity=0.346 Sum_probs=91.4
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHhCCCC-----ceecccccCcccCccccchhcccccCCCCC-----------------
Q 045387 9 KNGLKKGPWTAEEDQKLVDYIQKHGHGR-----WRTLPKNAGLKRCGKSCRLRWTNYLRPDIK----------------- 66 (242)
Q Consensus 9 k~~~kkg~WT~EEDe~L~~~V~~~G~~~-----W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lk----------------- 66 (242)
.+.+++++||+|||+.|+++|.++|..+ |..||+.|+ |||+.|||.||..+|++.+.
T Consensus 3 ~~~~~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~Lp-GRT~nsIRnRw~~~L~~~ln~vy~~ded~~Li~d~~G 81 (246)
T 1ign_A 3 LPSHNKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVP-NHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDG 81 (246)
T ss_dssp -----CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTST-TSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCTTS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcC-CCCHHHHHHHHHHHHhhhcccccccCcchhhhhccCC
Confidence 4568899999999999999999998532 999999999 99999999999999999986
Q ss_pred ------------CCCCCHHHHHHHHHHHHH-h--------------------------------C---------------
Q 045387 67 ------------RGKFSLEEEEAIIQLHKV-L--------------------------------G--------------- 86 (242)
Q Consensus 67 ------------kg~WT~EED~~L~~lv~~-~--------------------------------G--------------- 86 (242)
+.+||.|||-.|...+.+ | |
T Consensus 82 n~ikis~lp~siK~rftaeeDy~L~~~i~~~f~~~~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 161 (246)
T 1ign_A 82 NLIKTKVLPPSIKRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAAYR 161 (246)
T ss_dssp CBCEESSCCCCSCCCCCHHHHHHHHHHHHHHHHHHHHCBCSSSCCBCC-------------------------------C
T ss_pred CceeeeccCccccCccchhccHHHHHHHHHHHhhhhhhcCccccccccccccchhhhhhhhcccCccccccCCcchhhhc
Confidence 789999999999998876 2 1
Q ss_pred ----------CcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 87 ----------NKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 87 ----------~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
..|..||+.+|+||..++|+||...++..
T Consensus 162 ~~~~~gp~~~~~fk~ia~~~P~HT~~SWRdRyrKfl~~~ 200 (246)
T 1ign_A 162 TQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAY 200 (246)
T ss_dssp CCCCCCCCCTTHHHHHHHHTTTSCHHHHHHHHHHTHHHH
T ss_pred cccccCcchHHHHHHHHHHCCCCChhhHHHHHHHHHhhc
Confidence 16999999999999999999999887654
No 11
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=99.73 E-value=8.1e-19 Score=139.57 Aligned_cols=83 Identities=19% Similarity=0.409 Sum_probs=77.9
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHHHhCCCCceeccccc----CcccCccccchhcccccC-----CCCCCC-CCCHHHHHH
Q 045387 8 DKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNA----GLKRCGKSCRLRWTNYLR-----PDIKRG-KFSLEEEEA 77 (242)
Q Consensus 8 ~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l----~~~Rt~~qCr~Rw~~~L~-----p~lkkg-~WT~EED~~ 77 (242)
.++..++++||+|||+.|+++|.+||.++|..|++.+ + +||+.+|++||.++++ |.++++ +|++||+.+
T Consensus 11 ~~~rr~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~-~RT~v~lKdRWrnllk~~~~~p~~krg~~~p~e~~~r 89 (121)
T 2juh_A 11 LSQRRIRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNAD-HRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQDLLDR 89 (121)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCS-SCCSHHHHHHHHHHHHHHHTCSTTCCCSCCCHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccC-CCCHHHHHHHHHHHHhhhccCCcccCCCCCCHHHHHH
Confidence 4567899999999999999999999988999999974 5 9999999999999998 999999 999999999
Q ss_pred HHHHHHHhCCcchh
Q 045387 78 IIQLHKVLGNKWSA 91 (242)
Q Consensus 78 L~~lv~~~G~~W~~ 91 (242)
|+.++..+|++|.+
T Consensus 90 v~~~h~~~gn~~~~ 103 (121)
T 2juh_A 90 VLAAHAYWSQQQGK 103 (121)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHccchhc
Confidence 99999999999976
No 12
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=99.72 E-value=1.8e-18 Score=126.33 Aligned_cols=58 Identities=24% Similarity=0.358 Sum_probs=47.2
Q ss_pred chhcccccCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhh
Q 045387 54 RLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHI 112 (242)
Q Consensus 54 r~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l 112 (242)
--||.++|+|++++++||+|||++|+++|.+||++|+.||+.| |||+++||+||+.+.
T Consensus 10 ~~~~~~~ldP~i~k~~wT~EED~~L~~l~~~~G~kW~~IA~~l-gRt~~q~knRw~~L~ 67 (73)
T 2llk_A 10 GRENLYFQGDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAAL-GRSASSVKDRCRLMK 67 (73)
T ss_dssp ---------CCCCCCSSCHHHHHHHHHHHHHHSSCHHHHHHHH-TSCHHHHHHHHHHCS
T ss_pred CcceeeecCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999999999 999999999998653
No 13
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=2.8e-18 Score=120.15 Aligned_cols=57 Identities=26% Similarity=0.556 Sum_probs=54.4
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCC
Q 045387 9 KNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIK 66 (242)
Q Consensus 9 k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lk 66 (242)
.|.+++++||+|||++|+++|.+||.++|..||+.|+ +|++.||+.||.++|+|+++
T Consensus 3 ~p~~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~l~p~i~ 59 (60)
T 2d9a_A 3 SGSSGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFP-NRTDQQCQYRWLRVLSGPSS 59 (60)
T ss_dssp SCCCCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHCS-SSCHHHHHHHHHHTSCSSSC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcc-CCCHHHHHHHHHHHcCCccC
Confidence 5789999999999999999999999879999999999 99999999999999999876
No 14
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.4e-17 Score=118.86 Aligned_cols=60 Identities=27% Similarity=0.398 Sum_probs=57.4
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhHHHhCC
Q 045387 60 YLRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMG 120 (242)
Q Consensus 60 ~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~ 120 (242)
+|+|.+++++||+|||++|+++|.+||.+|..||+ ++|||++|||+||.+++++.+++..
T Consensus 2 ~L~P~~~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~gRt~~qcr~Rw~~~l~~~~~~~~ 61 (66)
T 2din_A 2 SSGSSGKKTEWSREEEEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRDS 61 (66)
T ss_dssp CCSSSSSCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HHSSCHHHHHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCCHHHHhc-ccCcCHHHHHHHHHHHhChHhcCCC
Confidence 79999999999999999999999999999999999 8899999999999999999988744
No 15
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=8.5e-18 Score=121.23 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=57.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhC-CcchhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCC
Q 045387 62 RPDIKRGKFSLEEEEAIIQLHKVLG-NKWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPV 124 (242)
Q Consensus 62 ~p~lkkg~WT~EED~~L~~lv~~~G-~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~ 124 (242)
.|.+++++||+|||++|+++|.+|| ++|..||..|+|||+.||++||.++|++.++++.|++.
T Consensus 4 ~~~~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt~e 67 (70)
T 2dim_A 4 GSSGKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSGP 67 (70)
T ss_dssp CSCSTTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSCCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCChH
Confidence 5678999999999999999999999 89999999999999999999999999999998555443
No 16
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.70 E-value=1.5e-17 Score=120.77 Aligned_cols=65 Identities=26% Similarity=0.334 Sum_probs=59.8
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCCCc
Q 045387 61 LRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTH 126 (242)
Q Consensus 61 L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~t~ 126 (242)
.+|.+++++||+|||++|+++|.+||.+|..||+.|+|||++|||+||+.++++..+. |+++.+.
T Consensus 3 ~~p~~~~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~r~~~~l~~~~~~-g~~~~~~ 67 (72)
T 2cu7_A 3 SGSSGYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKC-GLDKETP 67 (72)
T ss_dssp CCCSSCCCCCCHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHHHHHSCS-CTTCCCS
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc-CCCCCcc
Confidence 5789999999999999999999999999999999999999999999999999998776 7666543
No 17
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=99.70 E-value=4.3e-18 Score=115.94 Aligned_cols=52 Identities=52% Similarity=1.001 Sum_probs=49.6
Q ss_pred CCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCC
Q 045387 12 LKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPD 64 (242)
Q Consensus 12 ~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~ 64 (242)
+++|+||+|||++|+++|.+||.++|..||+.|+ +|++.||+.||.++|+|+
T Consensus 1 l~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~L~P~ 52 (52)
T 1gvd_A 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPE 52 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTST-TCCHHHHHHHHHHTTSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcChHHHHHHHcC-CCCHHHHHHHHHHHcCcC
Confidence 5799999999999999999999878999999998 999999999999999985
No 18
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=99.70 E-value=5.9e-18 Score=134.78 Aligned_cols=79 Identities=22% Similarity=0.392 Sum_probs=73.1
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHhCCCCceeccccc----CcccCccccchhccccc-----CCCCCCCCCCHHH-HHHH
Q 045387 9 KNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNA----GLKRCGKSCRLRWTNYL-----RPDIKRGKFSLEE-EEAI 78 (242)
Q Consensus 9 k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l----~~~Rt~~qCr~Rw~~~L-----~p~lkkg~WT~EE-D~~L 78 (242)
+...++++||+|||+.|+++|.+||.++|..|++.+ + +||+.+|++||.+++ +|.++++.|+++| +.+|
T Consensus 26 ~~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~-~RT~vdlKdRWrnllk~~~~~p~~kr~~~~p~e~~~~v 104 (122)
T 2roh_A 26 GQRRIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVH-HRTYVDLKDKWKTLVHTASIAPQQRRGAPVPQELLDRV 104 (122)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSC-CCCHHHHHHHHHHHHHHHHSCTTTCCCSSCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccC-CCCHHHHHHHHHHHHhhccCCccccCCCCCCHHHHHHH
Confidence 445789999999999999999999999999999864 5 999999999999999 8999999999999 8999
Q ss_pred HHHHHHhCCc
Q 045387 79 IQLHKVLGNK 88 (242)
Q Consensus 79 ~~lv~~~G~~ 88 (242)
++++..+|+.
T Consensus 105 ~~~h~~~g~~ 114 (122)
T 2roh_A 105 LAAQAYWSVD 114 (122)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHhhH
Confidence 9999999975
No 19
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=99.68 E-value=6.2e-18 Score=115.06 Aligned_cols=52 Identities=33% Similarity=0.756 Sum_probs=48.3
Q ss_pred CCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCC
Q 045387 12 LKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPD 64 (242)
Q Consensus 12 ~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~ 64 (242)
+++++||+|||++|+++|.+||.++|..||+.|+ +|++.||+.||.++|+|+
T Consensus 1 i~~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~L~P~ 52 (52)
T 1guu_A 1 LGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLP-NRTDVQCQHRWQKVLNPE 52 (52)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTST-TCCHHHHHHHHHHHHSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcC-CCCHHHHHHHHHHHcCcC
Confidence 5789999999999999999999879999999999 999999999999999985
No 20
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=99.67 E-value=1.7e-17 Score=132.39 Aligned_cols=89 Identities=18% Similarity=0.310 Sum_probs=79.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCCCcccchhhhhhhhccCC
Q 045387 62 RPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTHSPRLDLLELSSILSS 141 (242)
Q Consensus 62 ~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~t~~~~~~ll~~~si~~s 141 (242)
.+..++++||+|||++|+++|..||.+|..||..|+|||+.||+.||.++|.+.+.+ .+|+.+++..|+.+...+|.
T Consensus 6 ~~~~kk~~WT~eED~~L~~~v~~~G~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~---~~WT~eEd~~L~~~v~~~G~ 82 (126)
T 3osg_A 6 LKAAKKQKFTPEEDEMLKRAVAQHGSDWKMIAATFPNRNARQCRDRWKNYLAPSISH---TPWTAEEDALLVQKIQEYGR 82 (126)
T ss_dssp -CBCSSCCCCHHHHHHHHHHHHHHTTCHHHHHHTCTTCCHHHHHHHHHHHTSTTSCC---SCCCHHHHHHHHHHHHHHCS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHhhhccccccc---ccCCHHHHHHHHHHHHHHCc
Confidence 456889999999999999999999999999999999999999999999999998887 57799999999999999999
Q ss_pred CCCCCCcccccc
Q 045387 142 SLCNSTQLNASN 153 (242)
Q Consensus 142 ~~~~~s~~~~s~ 153 (242)
.|..++..-+.+
T Consensus 83 ~W~~Ia~~l~gR 94 (126)
T 3osg_A 83 QWAIIAKFFPGR 94 (126)
T ss_dssp CHHHHHTTSTTC
T ss_pred CHHHHHHHcCCC
Confidence 998876554443
No 21
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=99.67 E-value=1.6e-17 Score=128.19 Aligned_cols=85 Identities=21% Similarity=0.459 Sum_probs=76.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCC-cchhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCCCcccchhhhhhhhccCCC
Q 045387 64 DIKRGKFSLEEEEAIIQLHKVLGN-KWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTHSPRLDLLELSSILSSS 142 (242)
Q Consensus 64 ~lkkg~WT~EED~~L~~lv~~~G~-~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~t~~~~~~ll~~~si~~s~ 142 (242)
++++|+||+|||++|+++|.+||. +|..||..|||||+.||+.||.++|.+.+++ .+|+.+++..|+.+...+|..
T Consensus 1 ~l~k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~---~~Wt~eEd~~L~~~~~~~G~~ 77 (105)
T 1gv2_A 1 ELIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKK---TSWTEEEDRIIYQAHKRLGNR 77 (105)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTCCCCCC---CCCCHHHHHHHHHHHHHHSSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCcHHHHhhhhcCCCHHHHHHHHHhccCCcccc---cCCCHHHHHHHHHHHHHhCCC
Confidence 368999999999999999999996 7999999999999999999999999998877 677889999999999999998
Q ss_pred CCCCCcccc
Q 045387 143 LCNSTQLNA 151 (242)
Q Consensus 143 ~~~~s~~~~ 151 (242)
|..++..-+
T Consensus 78 W~~Ia~~l~ 86 (105)
T 1gv2_A 78 WAEIAKLLP 86 (105)
T ss_dssp HHHHHTTCT
T ss_pred HHHHHHHcC
Confidence 877765433
No 22
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=99.67 E-value=1.4e-17 Score=119.80 Aligned_cols=65 Identities=20% Similarity=0.386 Sum_probs=59.5
Q ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCc-ccCccccchhcccccCCCCCCCCCC
Q 045387 7 SDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGL-KRCGKSCRLRWTNYLRPDIKRGKFS 71 (242)
Q Consensus 7 ~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~-~Rt~~qCr~Rw~~~L~p~lkkg~WT 71 (242)
..++..++++||+|||++|+++|.+||.++|..||+.|+. +|++.||++||.++|+|.+.++..+
T Consensus 3 ~~~~~~~r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p~i~k~~~~ 68 (69)
T 1ity_A 3 EKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSE 68 (69)
T ss_dssp CTTCSSSCCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHHHHTSCCCCCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 3567889999999999999999999998899999999976 8999999999999999999887654
No 23
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=4e-17 Score=114.25 Aligned_cols=55 Identities=25% Similarity=0.472 Sum_probs=51.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhC-CcchhhcccCCCCCHHHHHHHHHHhhhhHH
Q 045387 62 RPDIKRGKFSLEEEEAIIQLHKVLG-NKWSAIASRLPGRTDNEIKNYWNTHIKKKL 116 (242)
Q Consensus 62 ~p~lkkg~WT~EED~~L~~lv~~~G-~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~ 116 (242)
+|.+++++||+|||++|+++|.+|| ++|..||..|+|||+.||++||.++|++.+
T Consensus 3 ~p~~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~i 58 (60)
T 2d9a_A 3 SGSSGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQYRWLRVLSGPS 58 (60)
T ss_dssp SCCCCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHCSSSCHHHHHHHHHHTSCSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHccCCCHHHHHHHHHHHcCCcc
Confidence 5788999999999999999999999 699999999999999999999999998764
No 24
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=99.64 E-value=1.5e-16 Score=108.22 Aligned_cols=50 Identities=28% Similarity=0.598 Sum_probs=46.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCC-cchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 65 IKRGKFSLEEEEAIIQLHKVLGN-KWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 65 lkkg~WT~EED~~L~~lv~~~G~-~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
+++++||+|||++|+++|.+||. +|..||+.|+|||+.||++||.++|++
T Consensus 1 i~~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P 51 (52)
T 1guu_A 1 LGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNP 51 (52)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcCCCCHHHHHHHHHHHcCc
Confidence 46899999999999999999997 999999999999999999999999875
No 25
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=99.63 E-value=2.7e-16 Score=113.09 Aligned_cols=61 Identities=26% Similarity=0.348 Sum_probs=55.9
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHhC-CcchhhcccCC--CCCHHHHHHHHHHhhhhHHHhCC
Q 045387 60 YLRPDIKRGKFSLEEEEAIIQLHKVLG-NKWSAIASRLP--GRTDNEIKNYWNTHIKKKLLRMG 120 (242)
Q Consensus 60 ~L~p~lkkg~WT~EED~~L~~lv~~~G-~~W~~IA~~lp--gRT~~q~k~rW~~~l~k~~~k~~ 120 (242)
..++..++++||+|||++|+++|.+|| ++|..||..|+ |||+.||++||.++|++.+.+..
T Consensus 3 ~~~~~~~r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p~i~k~~ 66 (69)
T 1ity_A 3 EKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSD 66 (69)
T ss_dssp CTTCSSSCCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHHHHTSCCCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHHcCCCCCCCC
Confidence 345677899999999999999999999 79999999999 99999999999999999887754
No 26
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=99.63 E-value=1.2e-16 Score=128.11 Aligned_cols=84 Identities=21% Similarity=0.370 Sum_probs=76.0
Q ss_pred CCCCCHHHHHHHHHHHHHhC-CcchhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCCCcccchhhhhhhhccCCCCCC
Q 045387 67 RGKFSLEEEEAIIQLHKVLG-NKWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTHSPRLDLLELSSILSSSLCN 145 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~G-~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~t~~~~~~ll~~~si~~s~~~~ 145 (242)
+|+||+|||++|+++|..|| ++|..||..|||||+.||+.||.++|.+.+.+ ++|+.+++..|+.+...+|+.|..
T Consensus 2 Kg~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~---~~Wt~eEd~~L~~~~~~~G~~W~~ 78 (131)
T 3zqc_A 2 KGPFTEAEDDLIREYVKENGPQNWPRITSFLPNRSPKQCRERWFNHLDPAVVK---HAWTPEEDETIFRNYLKLGSKWSV 78 (131)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSCCGGGGTTSCTTSCHHHHHHHHHHHTSTTCCC---SCCCHHHHHHHHHHHHHSCSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCcCCHHHHHHHHCCCCHHHHHHHHhhccCccccC---CCCCHHHHHHHHHHHHHHCcCHHH
Confidence 68999999999999999999 78999999999999999999999999999888 577999999999999999999988
Q ss_pred CCcccccc
Q 045387 146 STQLNASN 153 (242)
Q Consensus 146 ~s~~~~s~ 153 (242)
++..-+.+
T Consensus 79 Ia~~l~gR 86 (131)
T 3zqc_A 79 IAKLIPGR 86 (131)
T ss_dssp HTTTSTTC
T ss_pred HHHHcCCC
Confidence 76654443
No 27
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=99.63 E-value=4.6e-17 Score=126.31 Aligned_cols=80 Identities=21% Similarity=0.309 Sum_probs=73.3
Q ss_pred CCCCCHHHHHHHHHHHHHhCC-cchhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCCCcccchhhhhhhhccCCCCCC
Q 045387 67 RGKFSLEEEEAIIQLHKVLGN-KWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTHSPRLDLLELSSILSSSLCN 145 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~G~-~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~t~~~~~~ll~~~si~~s~~~~ 145 (242)
+++||+|||++|+++|..||. +|..||..|||||+.||+.||.++|.+.+.+ +||+.+++..|+.+...+|+.|..
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~---~~WT~eEd~~L~~~~~~~G~~W~~ 77 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKDWIRISQLMITRNPRQCRERWNNYINPALRT---DPWSPEEDMLLDQKYAEYGPKWNK 77 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSCHHHHHHHTTTSCHHHHHHHHHHHSSSCCTT---CCCCHHHHHHHHHHHHHTCSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHhhhcCCCCHHHHHHHHHHHHcccccc---cccCHHHHHHHHHHHHHhCcCHHH
Confidence 589999999999999999995 8999999999999999999999999999887 677999999999999999998887
Q ss_pred CCcc
Q 045387 146 STQL 149 (242)
Q Consensus 146 ~s~~ 149 (242)
++..
T Consensus 78 Ia~~ 81 (107)
T 2k9n_A 78 ISKF 81 (107)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7544
No 28
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=99.63 E-value=2.6e-16 Score=107.09 Aligned_cols=50 Identities=30% Similarity=0.719 Sum_probs=47.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCC-cchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 65 IKRGKFSLEEEEAIIQLHKVLGN-KWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 65 lkkg~WT~EED~~L~~lv~~~G~-~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
+++++||+|||++|+++|.+||. +|..||..|+|||+.||++||.++|++
T Consensus 1 l~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P 51 (52)
T 1gvd_A 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNP 51 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcChHHHHHHHcCCCCHHHHHHHHHHHcCc
Confidence 47899999999999999999996 699999999999999999999999875
No 29
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=99.62 E-value=6.3e-17 Score=115.24 Aligned_cols=57 Identities=32% Similarity=0.510 Sum_probs=49.6
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccC-cccCccccchhcccccCCCCC
Q 045387 10 NGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAG-LKRCGKSCRLRWTNYLRPDIK 66 (242)
Q Consensus 10 ~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~-~~Rt~~qCr~Rw~~~L~p~lk 66 (242)
...++++||+|||++|+++|.+||.++|..||+.++ .+|++.||++||.++++|+++
T Consensus 7 ~~~kk~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~glN 64 (64)
T 3sjm_A 7 NITKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 64 (64)
T ss_dssp ---CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHhccCCC
Confidence 345789999999999999999999889999999754 389999999999999998764
No 30
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=99.61 E-value=1.2e-16 Score=112.15 Aligned_cols=56 Identities=18% Similarity=0.496 Sum_probs=52.1
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCC
Q 045387 9 KNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDI 65 (242)
Q Consensus 9 k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~l 65 (242)
.+.+++++||+|||++|+++|.+||.++|..||+.|+ +|++.||+.||.++|.+..
T Consensus 3 s~~~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~-~Rt~~qcr~r~~~~l~~~~ 58 (60)
T 1x41_A 3 SGSSGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMC-TKTKEECEKHYMKYFSGPS 58 (60)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHHT-TSCHHHHHHHHHHHTTCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHhC-CCCHHHHHHHHHHHccCCC
Confidence 3678999999999999999999999889999999999 9999999999999998653
No 31
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=99.59 E-value=9.5e-16 Score=104.79 Aligned_cols=49 Identities=29% Similarity=0.428 Sum_probs=46.2
Q ss_pred CCCCCCHHHHHHHHHHHHHhC-CcchhhcccCC--CCCHHHHHHHHHHhhhh
Q 045387 66 KRGKFSLEEEEAIIQLHKVLG-NKWSAIASRLP--GRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 66 kkg~WT~EED~~L~~lv~~~G-~~W~~IA~~lp--gRT~~q~k~rW~~~l~k 114 (242)
++++||+|||++|+++|.+|| ++|+.||..|+ |||+.||++||.++++.
T Consensus 1 kr~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k~ 52 (53)
T 1w0t_A 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKL 52 (53)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence 478999999999999999999 79999999999 99999999999998864
No 32
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=99.58 E-value=1e-15 Score=107.35 Aligned_cols=53 Identities=15% Similarity=0.270 Sum_probs=49.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhC-CcchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 62 RPDIKRGKFSLEEEEAIIQLHKVLG-NKWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 62 ~p~lkkg~WT~EED~~L~~lv~~~G-~~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
.+.+.+++||+|||++|+++|.+|| ++|..||+.|+|||+.||++||.++|.+
T Consensus 3 s~~~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~r~~~~l~~ 56 (60)
T 1x41_A 3 SGSSGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKYFSG 56 (60)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHhCCCCHHHHHHHHHHHccC
Confidence 4678899999999999999999999 8999999999999999999999988753
No 33
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=99.57 E-value=4e-16 Score=106.64 Aligned_cols=50 Identities=26% Similarity=0.522 Sum_probs=46.6
Q ss_pred CcCCCCHHHHHHHHHHHHHhCCCCceecccccCc-ccCccccchhcccccC
Q 045387 13 KKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGL-KRCGKSCRLRWTNYLR 62 (242)
Q Consensus 13 kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~-~Rt~~qCr~Rw~~~L~ 62 (242)
++++||+|||++|+++|.+||.++|..||..++. +|++.||++||.++++
T Consensus 1 kr~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 5899999999999999999998899999999875 6999999999999875
No 34
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.5e-16 Score=113.47 Aligned_cols=59 Identities=25% Similarity=0.423 Sum_probs=54.3
Q ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCC
Q 045387 7 SDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRG 68 (242)
Q Consensus 7 ~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg 68 (242)
+..|.+++++||+|||++|+++|..+|. +|..||+ ++ +|++.||+.||.++|+|.++++
T Consensus 2 ~L~P~~~k~~WT~eED~~L~~~~~~~g~-~W~~Ia~-~~-gRt~~qcr~Rw~~~l~~~~~~~ 60 (66)
T 2din_A 2 SSGSSGKKTEWSREEEEKLLHLAKLMPT-QWRTIAP-II-GRTAAQCLEHYEFLLDKAAQRD 60 (66)
T ss_dssp CCSSSSSCCCCCHHHHHHHHHHHHHCTT-CHHHHHH-HH-SSCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCC-CHHHHhc-cc-CcCHHHHHHHHHHHhChHhcCC
Confidence 4679999999999999999999999996 9999999 77 8999999999999999877654
No 35
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=3.4e-16 Score=114.14 Aligned_cols=61 Identities=25% Similarity=0.395 Sum_probs=56.2
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHHHhCC-----CCceecccccCcccCccccchhcccccCCCCCCCC
Q 045387 8 DKNGLKKGPWTAEEDQKLVDYIQKHGH-----GRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGK 69 (242)
Q Consensus 8 ~k~~~kkg~WT~EEDe~L~~~V~~~G~-----~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~ 69 (242)
.+|++++++||+|||++|+++|.+||. ++|..||+.|+ +||+.||+.||.++|.+.++.|.
T Consensus 2 s~p~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~-~Rt~~qcr~r~~~~l~~~~k~g~ 67 (75)
T 2yum_A 2 SSGSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELG-NRTAKQVASQVQKYFIKLTKAGI 67 (75)
T ss_dssp CCCCCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHS-SSCHHHHHHHHHHHHGGGSTTCS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999999996 68999999999 99999999999999998777664
No 36
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=99.56 E-value=2.6e-15 Score=106.85 Aligned_cols=52 Identities=31% Similarity=0.521 Sum_probs=46.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHhC-CcchhhcccCC--CCCHHHHHHHHHHhhhhHH
Q 045387 65 IKRGKFSLEEEEAIIQLHKVLG-NKWSAIASRLP--GRTDNEIKNYWNTHIKKKL 116 (242)
Q Consensus 65 lkkg~WT~EED~~L~~lv~~~G-~~W~~IA~~lp--gRT~~q~k~rW~~~l~k~~ 116 (242)
.++++||+|||++|+++|.+|| ++|..||+.++ |||+.||++||.+++++.+
T Consensus 9 ~kk~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~gl 63 (64)
T 3sjm_A 9 TKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGM 63 (64)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHhccCC
Confidence 5789999999999999999999 68999999865 9999999999999887643
No 37
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.4e-15 Score=109.59 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=53.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhC------CcchhhcccCCCCCHHHHHHHHHHhhhhHHHhC
Q 045387 62 RPDIKRGKFSLEEEEAIIQLHKVLG------NKWSAIASRLPGRTDNEIKNYWNTHIKKKLLRM 119 (242)
Q Consensus 62 ~p~lkkg~WT~EED~~L~~lv~~~G------~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~ 119 (242)
+|.+.+++||+|||++|+++|.+|| ++|..||..|+|||+.||++||.++|.+.++.+
T Consensus 3 ~p~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~~~k~g 66 (75)
T 2yum_A 3 SGSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIKLTKAG 66 (75)
T ss_dssp CCCCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGGGSTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcC
Confidence 5788999999999999999999999 789999999999999999999999998876553
No 38
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=99.55 E-value=9.6e-16 Score=106.85 Aligned_cols=52 Identities=23% Similarity=0.458 Sum_probs=47.7
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhccccc
Q 045387 10 NGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYL 61 (242)
Q Consensus 10 ~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L 61 (242)
..+.+++||+|||++|+++|.+||.++|..||+.|+.+|++.||+.||.+++
T Consensus 5 ~p~~~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qcr~r~~~~~ 56 (58)
T 2elk_A 5 SSGFDENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTY 56 (58)
T ss_dssp CCSCCCCCCHHHHHHHHHHHHHTTTTCHHHHHHHHCSSCCHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHHCCCCCHHHHHHHHHHHc
Confidence 3466889999999999999999998899999999987899999999999864
No 39
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=99.53 E-value=7.9e-15 Score=102.20 Aligned_cols=50 Identities=22% Similarity=0.365 Sum_probs=46.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhC-CcchhhcccCC-CCCHHHHHHHHHHhh
Q 045387 63 PDIKRGKFSLEEEEAIIQLHKVLG-NKWSAIASRLP-GRTDNEIKNYWNTHI 112 (242)
Q Consensus 63 p~lkkg~WT~EED~~L~~lv~~~G-~~W~~IA~~lp-gRT~~q~k~rW~~~l 112 (242)
..+.+++||+|||++|+++|.+|| ++|..||+.|+ |||+.||++||.+++
T Consensus 5 ~p~~~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qcr~r~~~~~ 56 (58)
T 2elk_A 5 SSGFDENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTY 56 (58)
T ss_dssp CCSCCCCCCHHHHHHHHHHHHHTTTTCHHHHHHHHCSSCCHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHHCCCCCHHHHHHHHHHHc
Confidence 456788999999999999999999 89999999999 999999999998764
No 40
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.52 E-value=1.4e-15 Score=110.18 Aligned_cols=59 Identities=24% Similarity=0.367 Sum_probs=54.6
Q ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCC
Q 045387 7 SDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKR 67 (242)
Q Consensus 7 ~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkk 67 (242)
+..|.+++++||+|||++|+++|.+||. +|..||+.|+ +|++.||+.||.+++++.++.
T Consensus 2 s~~p~~~~~~WT~eEd~~l~~~~~~~G~-~W~~Ia~~~~-~Rt~~q~k~r~~~~l~~~~~~ 60 (72)
T 2cu7_A 2 SSGSSGYSVKWTIEEKELFEQGLAKFGR-RWTKISKLIG-SRTVLQVKSYARQYFKNKVKC 60 (72)
T ss_dssp CCCCSSCCCCCCHHHHHHHHHHHHHTCS-CHHHHHHHHS-SSCHHHHHHHHHHHHHHHSCS
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHCc-CHHHHHHHcC-CCCHHHHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999996 9999999999 999999999999998876665
No 41
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=99.25 E-value=1.7e-15 Score=114.30 Aligned_cols=56 Identities=23% Similarity=0.248 Sum_probs=52.9
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 60 YLRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 60 ~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
.+.|.+++++||+|||++|+++|.+||++|..||..|+|||+++|++||++++++.
T Consensus 9 ~~~p~~~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l~gRt~~q~k~r~~~~lrk~ 64 (89)
T 2ltp_A 9 SGRENLYFQGWTEEEMGTAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQ 64 (89)
Confidence 56788999999999999999999999999999999999999999999999988764
No 42
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=99.49 E-value=9.8e-15 Score=113.43 Aligned_cols=84 Identities=23% Similarity=0.350 Sum_probs=68.2
Q ss_pred CCCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccC---cccCccccchhccccc-----CCCCCCCCCCHHHH
Q 045387 4 PPSSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAG---LKRCGKSCRLRWTNYL-----RPDIKRGKFSLEEE 75 (242)
Q Consensus 4 ~~~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~---~~Rt~~qCr~Rw~~~L-----~p~lkkg~WT~EED 75 (242)
.....++..++++||+|||+.|+++|.+||.++|..|++.++ .+||+.+|++||.+++ +|.+++|.-+++|-
T Consensus 3 ~~~~~~~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lKdrWrnllk~~~~~p~~~rg~~~P~~~ 82 (105)
T 2aje_A 3 HMLEDPQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQEL 82 (105)
T ss_dssp ------CCCCCCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHHHHHHHHHHTTTCCTTTTTCCSCCCHH
T ss_pred CCccccCCCCCCCCCHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCcccccCCCCCHHH
Confidence 344566788999999999999999999999999999999752 3999999999999998 68899998888776
Q ss_pred HH-HHHHHHHhCC
Q 045387 76 EA-IIQLHKVLGN 87 (242)
Q Consensus 76 ~~-L~~lv~~~G~ 87 (242)
.. +++++..+|+
T Consensus 83 l~rv~~~~~~~~~ 95 (105)
T 2aje_A 83 LNRVLNAHGYWTQ 95 (105)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 65 7777766653
No 43
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=99.48 E-value=9e-15 Score=116.25 Aligned_cols=84 Identities=26% Similarity=0.413 Sum_probs=71.8
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHhCC-cchhhccc----CCCCCHHHHHHHHHHhhh-----hHHHhCCCCCCCcccch
Q 045387 61 LRPDIKRGKFSLEEEEAIIQLHKVLGN-KWSAIASR----LPGRTDNEIKNYWNTHIK-----KKLLRMGIDPVTHSPRL 130 (242)
Q Consensus 61 L~p~lkkg~WT~EED~~L~~lv~~~G~-~W~~IA~~----lpgRT~~q~k~rW~~~l~-----k~~~k~~~~p~t~~~~~ 130 (242)
+.+..++++||+|||+.|+++|.+||. +|+.|++. |+|||+.+||+||.++++ +.+++ + .+++.+++.
T Consensus 11 ~~~rr~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~~~~~p~~kr-g-~~~p~e~~~ 88 (121)
T 2juh_A 11 LSQRRIRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRR-G-EPVPQDLLD 88 (121)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHHHHHHHHHHHHHTCSTTCC-C-SCCCHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHHHHHHHHHhhhccCCcccC-C-CCCCHHHHH
Confidence 456678999999999999999999996 99999998 499999999999999998 44444 2 266777778
Q ss_pred hhhhhhhccCCCCCCC
Q 045387 131 DLLELSSILSSSLCNS 146 (242)
Q Consensus 131 ~ll~~~si~~s~~~~~ 146 (242)
.++.++..+|+.+++.
T Consensus 89 rv~~~h~~~gn~~~~~ 104 (121)
T 2juh_A 89 RVLAAHAYWSQQQGKQ 104 (121)
T ss_dssp HHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHccchhcc
Confidence 8999999999988874
No 44
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=99.46 E-value=1.4e-14 Score=105.72 Aligned_cols=61 Identities=23% Similarity=0.289 Sum_probs=47.5
Q ss_pred CCCCCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCC
Q 045387 2 GRPPSSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIK 66 (242)
Q Consensus 2 gr~~~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lk 66 (242)
+|+-....|++++|+||+|||++|+++|.+||. +|..||+.| ||++.+|+.||.. |.....
T Consensus 11 ~~~~~~ldP~i~k~~wT~EED~~L~~l~~~~G~-kW~~IA~~l--gRt~~q~knRw~~-L~~~~~ 71 (73)
T 2llk_A 11 RENLYFQGDRNHVGKYTPEEIEKLKELRIKHGN-DWATIGAAL--GRSASSVKDRCRL-MKDTCN 71 (73)
T ss_dssp --------CCCCCCSSCHHHHHHHHHHHHHHSS-CHHHHHHHH--TSCHHHHHHHHHH-CSCCCS
T ss_pred cceeeecCCCCCCCCCCHHHHHHHHHHHHHHCC-CHHHHHHHh--CCCHHHHHHHHHH-HHHHcc
Confidence 456677899999999999999999999999996 699999998 7999999999985 444433
No 45
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=99.45 E-value=3.4e-14 Score=106.03 Aligned_cols=69 Identities=23% Similarity=0.517 Sum_probs=59.6
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCceecccc----cCcccCccccchhccccc-----CCCCCCC-CCCHHHHHHHHHHHHH
Q 045387 15 GPWTAEEDQKLVDYIQKHGHGRWRTLPKN----AGLKRCGKSCRLRWTNYL-----RPDIKRG-KFSLEEEEAIIQLHKV 84 (242)
Q Consensus 15 g~WT~EEDe~L~~~V~~~G~~~W~~Ia~~----l~~~Rt~~qCr~Rw~~~L-----~p~lkkg-~WT~EED~~L~~lv~~ 84 (242)
++||+|||+.|+++|.+||.|+|+.|++. ++ +||+.+|++||.+++ +|.++++ +..++...+++.++..
T Consensus 1 r~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~-~RT~~~lKdrWrnllk~~~~~p~~~~~~~~p~~~~~rv~~~~a~ 79 (83)
T 2ckx_A 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNAD-HRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQDLLDRVLAAHAY 79 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCT-TSCHHHHHHHHHHHHHHHHSCGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCcHHHHHhhccccC-CCCHHHHHHHHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999999985 77 999999999999987 5765554 6777887888887753
No 46
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=99.43 E-value=4.5e-14 Score=104.46 Aligned_cols=54 Identities=19% Similarity=0.426 Sum_probs=50.3
Q ss_pred CCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccc
Q 045387 5 PSSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNY 60 (242)
Q Consensus 5 ~~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~ 60 (242)
..+.+....+++||+|||++|+++|.+|| ++|..||+.|+ +||+.||+.||.++
T Consensus 9 ~~~~~~~~~~~~WT~eEd~~Ll~~v~~~G-~~W~~IA~~v~-~RT~~qcr~r~~~~ 62 (79)
T 2yus_A 9 LAKSKGASAGREWTEQETLLLLEALEMYK-DDWNKVSEHVG-SRTQDECILHFLRL 62 (79)
T ss_dssp CCCCCSSCCSCCCCHHHHHHHHHHHHHSS-SCHHHHHHHHS-SCCHHHHHHHHTTS
T ss_pred cCCccccccCCCcCHHHHHHHHHHHHHhC-CCHHHHHHHcC-CCCHHHHHHHHHHh
Confidence 45667778899999999999999999999 79999999999 99999999999998
No 47
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.40 E-value=2.5e-13 Score=98.99 Aligned_cols=51 Identities=8% Similarity=0.223 Sum_probs=47.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhC----CcchhhcccCCCCCHHHHHHHHHHhhh
Q 045387 63 PDIKRGKFSLEEEEAIIQLHKVLG----NKWSAIASRLPGRTDNEIKNYWNTHIK 113 (242)
Q Consensus 63 p~lkkg~WT~EED~~L~~lv~~~G----~~W~~IA~~lpgRT~~q~k~rW~~~l~ 113 (242)
+...+++||.|||.+|++++..|| ++|.+||+.|||||.++|++||+.+++
T Consensus 14 ~~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 14 ARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp TTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999 689999999999999999999987754
No 48
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=99.37 E-value=5.1e-13 Score=99.66 Aligned_cols=68 Identities=28% Similarity=0.502 Sum_probs=52.7
Q ss_pred CCCCHHHHHHHHHHHHHhCC-cchhhccc----CCCCCHHHHHHHHHHhhhhHHH----hCCCCCCCcccchhhhhhh
Q 045387 68 GKFSLEEEEAIIQLHKVLGN-KWSAIASR----LPGRTDNEIKNYWNTHIKKKLL----RMGIDPVTHSPRLDLLELS 136 (242)
Q Consensus 68 g~WT~EED~~L~~lv~~~G~-~W~~IA~~----lpgRT~~q~k~rW~~~l~k~~~----k~~~~p~t~~~~~~ll~~~ 136 (242)
++||+|||+.|+++|.+||. +|+.|++. |+|||+.+||+||.++++.... +.+ .|.....+..++.++
T Consensus 1 r~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~~RT~~~lKdrWrnllk~~~~~p~~~~~-~~~p~~~~~rv~~~~ 77 (83)
T 2ckx_A 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRG-EPVPQDLLDRVLAAH 77 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCS-SCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCcHHHHHhhccccCCCCHHHHHHHHHHHHHhccCCcccccC-CCCCHHHHHHHHHHH
Confidence 48999999999999999996 99999995 8999999999999999964432 212 344444444455544
No 49
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=99.37 E-value=6.6e-13 Score=103.10 Aligned_cols=76 Identities=25% Similarity=0.379 Sum_probs=59.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCC-cchhhcccC----CCCCHHHHHHHHHHhhh-----hHHHhCCCCCCCcccchhh
Q 045387 63 PDIKRGKFSLEEEEAIIQLHKVLGN-KWSAIASRL----PGRTDNEIKNYWNTHIK-----KKLLRMGIDPVTHSPRLDL 132 (242)
Q Consensus 63 p~lkkg~WT~EED~~L~~lv~~~G~-~W~~IA~~l----pgRT~~q~k~rW~~~l~-----k~~~k~~~~p~t~~~~~~l 132 (242)
+..++++||+|||+.|+++|.+||. +|+.|++.+ +|||+.+||+||.++++ +.++++ .|.....+..+
T Consensus 9 ~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lKdrWrnllk~~~~~p~~~rg--~~~P~~~l~rv 86 (105)
T 2aje_A 9 QRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRG--EPVPQELLNRV 86 (105)
T ss_dssp CCCCCCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHHHHHHHHHHTTTCCTTTTTC--CSCCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCcccccC--CCCCHHHHHHH
Confidence 4567899999999999999999996 999999965 89999999999999996 333332 34444444456
Q ss_pred hhhhhccC
Q 045387 133 LELSSILS 140 (242)
Q Consensus 133 l~~~si~~ 140 (242)
++++...+
T Consensus 87 ~~~~~~~~ 94 (105)
T 2aje_A 87 LNAHGYWT 94 (105)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665544
No 50
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=99.36 E-value=3.9e-13 Score=106.95 Aligned_cols=78 Identities=21% Similarity=0.319 Sum_probs=62.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCC-cchhhccc----CCCCCHHHHHHHHHHhhh-----hHHHhCCCCCCCccc-chh
Q 045387 63 PDIKRGKFSLEEEEAIIQLHKVLGN-KWSAIASR----LPGRTDNEIKNYWNTHIK-----KKLLRMGIDPVTHSP-RLD 131 (242)
Q Consensus 63 p~lkkg~WT~EED~~L~~lv~~~G~-~W~~IA~~----lpgRT~~q~k~rW~~~l~-----k~~~k~~~~p~t~~~-~~~ 131 (242)
...++++||+|||+.|+++|.+||. +|+.|++. |+|||+.+||+||.++++ +.+++ ..++.++ +..
T Consensus 27 ~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~~~~~p~~kr---~~~~p~e~~~~ 103 (122)
T 2roh_A 27 QRRIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHTASIAPQQRR---GAPVPQELLDR 103 (122)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHHSCTTTCC---CSSCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCccccC---CCCCCHHHHHH
Confidence 3457899999999999999999995 99999986 489999999999999995 44444 3444555 456
Q ss_pred hhhhhhccCCCC
Q 045387 132 LLELSSILSSSL 143 (242)
Q Consensus 132 ll~~~si~~s~~ 143 (242)
++.+|..+|+--
T Consensus 104 v~~~h~~~g~~~ 115 (122)
T 2roh_A 104 VLAAQAYWSVDS 115 (122)
T ss_dssp HHHHHHHHHSSC
T ss_pred HHHHHHHHhhHH
Confidence 788888888753
No 51
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=99.34 E-value=4.1e-13 Score=99.24 Aligned_cols=48 Identities=10% Similarity=0.232 Sum_probs=45.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHh
Q 045387 64 DIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTH 111 (242)
Q Consensus 64 ~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~ 111 (242)
...+++||+|||++|+++|.+||++|.+||++|++||+.||+.||.++
T Consensus 15 ~~~~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v~~RT~~qcr~r~~~~ 62 (79)
T 2yus_A 15 ASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRL 62 (79)
T ss_dssp SCCSCCCCHHHHHHHHHHHHHSSSCHHHHHHHHSSCCHHHHHHHHTTS
T ss_pred cccCCCcCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHHh
Confidence 456889999999999999999999999999999999999999999765
No 52
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.34 E-value=1.9e-13 Score=99.68 Aligned_cols=57 Identities=14% Similarity=0.350 Sum_probs=51.4
Q ss_pred CCCCCCCCCcCCCCHHHHHHHHHHHHHhCC---CCceecccccCcccCccccchhcccccC
Q 045387 5 PSSDKNGLKKGPWTAEEDQKLVDYIQKHGH---GRWRTLPKNAGLKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 5 ~~~~k~~~kkg~WT~EEDe~L~~~V~~~G~---~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~ 62 (242)
+..+++...+++||+|||++|..+|.+||. .+|..||+.|| |||..||+.||..++.
T Consensus 9 ~~~~~~~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vp-GRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 9 LRKERARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVP-SKSKEDCIARYKLLVS 68 (73)
T ss_dssp CCCCTTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCS-SSCHHHHHHHHHHHHS
T ss_pred ccccccccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 456778889999999999999999999993 47999999999 9999999999998765
No 53
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=99.02 E-value=9.1e-14 Score=104.83 Aligned_cols=57 Identities=25% Similarity=0.459 Sum_probs=52.1
Q ss_pred CCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCC
Q 045387 5 PSSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRP 63 (242)
Q Consensus 5 ~~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p 63 (242)
+....|.+++|+||+|||++|+++|..||. +|..||..|+ |||+.||+.||.++|..
T Consensus 7 ~~~~~p~~~~~~WT~eEd~~l~~~~~~~G~-~W~~IA~~l~-gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 7 HSSGRENLYFQGWTEEEMGTAKKGLLEHGR-NWSAIARMVG-SKTVSQCKNFYFNYKKR 63 (89)
Confidence 345668899999999999999999999996 8999999999 99999999999998864
No 54
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=99.32 E-value=5.7e-13 Score=116.48 Aligned_cols=78 Identities=19% Similarity=0.301 Sum_probs=58.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCc------chhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCCCCcccchhhhhhh
Q 045387 63 PDIKRGKFSLEEEEAIIQLHKVLGNK------WSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTHSPRLDLLELS 136 (242)
Q Consensus 63 p~lkkg~WT~EED~~L~~lv~~~G~~------W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p~t~~~~~~ll~~~ 136 (242)
+.+++++||+|||++|+++|.++|++ |..||+.|||||+++||+||+.+|++.+.. .+ +..+...|+...
T Consensus 4 ~~~~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L~~~ln~-vy---~~ded~~Li~d~ 79 (246)
T 1ign_A 4 PSHNKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEY-VY---EVDKFGKLVRDD 79 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGGCCC-EE---CBCTTSCBCBCT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHHhhhccc-cc---ccCcchhhhhcc
Confidence 45788999999999999999999975 999999999999999999999999998763 23 333333344444
Q ss_pred hccCCCCCCCC
Q 045387 137 SILSSSLCNST 147 (242)
Q Consensus 137 si~~s~~~~~s 147 (242)
. |+ |..++
T Consensus 80 ~--Gn-~ikis 87 (246)
T 1ign_A 80 D--GN-LIKTK 87 (246)
T ss_dssp T--SC-BCEES
T ss_pred C--CC-ceeee
Confidence 3 44 55444
No 55
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=99.29 E-value=3.8e-12 Score=89.66 Aligned_cols=50 Identities=24% Similarity=0.403 Sum_probs=45.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCcchhhc---ccCCCCCHHHHHHHHHHhhhh
Q 045387 65 IKRGKFSLEEEEAIIQLHKVLGNKWSAIA---SRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 65 lkkg~WT~EED~~L~~lv~~~G~~W~~IA---~~lpgRT~~q~k~rW~~~l~k 114 (242)
-.+.+||+|||+.|++.|++||.+|+.|+ ..+++||+.++|+||+++.+.
T Consensus 6 ~~r~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f~~~RT~VdLKdk~r~L~k~ 58 (62)
T 1x58_A 6 SGRKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRLISG 58 (62)
T ss_dssp CCSSSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHhHhHHHHHHhCCCccCcccchHHHHHHHHHhc
Confidence 36789999999999999999999999999 678999999999999988754
No 56
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=99.23 E-value=9.8e-12 Score=94.55 Aligned_cols=59 Identities=22% Similarity=0.430 Sum_probs=49.3
Q ss_pred CCCCCCHHHHHHHHHHHHHhC----CcchhhcccCCCCCHHHHHHHHHHhhhhH-HHhCCCCCC
Q 045387 66 KRGKFSLEEEEAIIQLHKVLG----NKWSAIASRLPGRTDNEIKNYWNTHIKKK-LLRMGIDPV 124 (242)
Q Consensus 66 kkg~WT~EED~~L~~lv~~~G----~~W~~IA~~lpgRT~~q~k~rW~~~l~k~-~~k~~~~p~ 124 (242)
.+++||.|||.+|++++..|| ++|.+||+.|||||+++|++||+.+++.. ....|..|.
T Consensus 7 ~~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~dv~~iesg~vp~ 70 (93)
T 2cjj_A 7 SGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70 (93)
T ss_dssp -CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 467999999999999999996 67999999999999999999999988664 334444443
No 57
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=99.00 E-value=4.7e-11 Score=90.76 Aligned_cols=48 Identities=15% Similarity=0.396 Sum_probs=43.2
Q ss_pred CcCCCCHHHHHHHHHHHHHhC---CCCceecccccCcccCccccchhccccc
Q 045387 13 KKGPWTAEEDQKLVDYIQKHG---HGRWRTLPKNAGLKRCGKSCRLRWTNYL 61 (242)
Q Consensus 13 kkg~WT~EEDe~L~~~V~~~G---~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L 61 (242)
.+++||+|||++|.+++.+|| ...|..||+.+| |||..+|+.||..++
T Consensus 7 ~~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vp-GRT~~q~k~ry~~l~ 57 (93)
T 2cjj_A 7 SGRPWSAKENKAFERALAVYDKDTPDRWANVARAVE-GRTPEEVKKHYEILV 57 (93)
T ss_dssp -CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHST-TCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 367899999999999999997 357999999999 999999999998864
No 58
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=5.8e-10 Score=78.17 Aligned_cols=47 Identities=15% Similarity=0.081 Sum_probs=43.6
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhh
Q 045387 66 KRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHI 112 (242)
Q Consensus 66 kkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l 112 (242)
..++||+||++++++++..||.+|..||..||+||..+|..+|+...
T Consensus 11 ~~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l~~rt~~~~v~~Yy~~K 57 (61)
T 2eqr_A 11 FMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTK 57 (61)
T ss_dssp CCCSCCHHHHHHHHHHHHHSTTCHHHHHHHCTTSCHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHHhc
Confidence 35799999999999999999999999999999999999999997654
No 59
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=98.90 E-value=1.5e-09 Score=82.44 Aligned_cols=66 Identities=14% Similarity=0.211 Sum_probs=59.5
Q ss_pred cccchhcccccCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcccC-----CCCCHHHHHHHHHHhhhhHHHhCC
Q 045387 51 KSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRL-----PGRTDNEIKNYWNTHIKKKLLRMG 120 (242)
Q Consensus 51 ~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~l-----pgRT~~q~k~rW~~~l~k~~~k~~ 120 (242)
.=+.++|.++|.+ .+||.||+..|++++++||.+|..|+.++ ++||..++|+||..+.++.+...+
T Consensus 18 ~yt~eeY~~~L~~----~~WTkEETd~Lf~L~~~fdlRW~vI~DRy~~~~~~~Rt~EdLK~RyY~v~~~l~~~r~ 88 (93)
T 3hm5_A 18 VYSEQEYQLYLHD----DAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRA 88 (93)
T ss_dssp CCCHHHHHHHTCB----TTBCHHHHHHHHHHHHHTTTCHHHHHHHSCTTTSCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHcCC----CCCCHHHHHHHHHHHHHhCCCeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 4567899999876 89999999999999999999999999998 589999999999999988877644
No 60
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.88 E-value=1.4e-09 Score=78.84 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=48.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhC----CcchhhcccCCCCCHHHHHHHHHHhhhhHHHhCCCCC
Q 045387 64 DIKRGKFSLEEEEAIIQLHKVLG----NKWSAIASRLPGRTDNEIKNYWNTHIKKKLLRMGIDP 123 (242)
Q Consensus 64 ~lkkg~WT~EED~~L~~lv~~~G----~~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~k~~~~p 123 (242)
..+.+.||.|||++|.+++.+|+ .+|.+||..+ |||..+|+.||+.+.+......|..|
T Consensus 5 ~~~~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l-gRt~~eV~~~y~~L~~d~~~~~G~vp 67 (72)
T 2cqq_A 5 SSGAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQLKDSVTCSPGMVS 67 (72)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-TSCHHHHHHHHHHHHHSCCCCSCCCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh-CCCHHHHHHHHHHHHHhcCccCCCCC
Confidence 45678999999999999999997 5799999998 99999999999888665433344433
No 61
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=98.85 E-value=6.8e-10 Score=78.15 Aligned_cols=49 Identities=14% Similarity=0.248 Sum_probs=44.1
Q ss_pred CCcCCCCHHHHHHHHHHHHHhCCCCceecc---cccCcccCccccchhcccccC
Q 045387 12 LKKGPWTAEEDQKLVDYIQKHGHGRWRTLP---KNAGLKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 12 ~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia---~~l~~~Rt~~qCr~Rw~~~L~ 62 (242)
.++.+||+|||+.|+++|.+||. +|..|+ ..++ +|+...+++||.+..+
T Consensus 6 ~~r~~WT~EE~~~L~~gV~k~G~-~W~~I~~~y~f~~-~RT~VdLKdk~r~L~k 57 (62)
T 1x58_A 6 SGRKDFTKEEVNYLFHGVKTMGN-HWNSILWSFPFQK-GRRAVDLAHKYHRLIS 57 (62)
T ss_dssp CCSSSCCHHHHHHHHHHHHHHCS-CHHHHHHHSCCCT-TCCHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHhH-hHHHHHHhCCCcc-CcccchHHHHHHHHHh
Confidence 47889999999999999999997 999999 4666 9999999999998654
No 62
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.85 E-value=1.2e-09 Score=76.62 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=46.7
Q ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccc
Q 045387 6 SSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNY 60 (242)
Q Consensus 6 ~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~ 60 (242)
.+++..-..++||+||++++.+++.+|| .+|..||..|+ +|+..+|..+|...
T Consensus 4 ~~~~~r~~~~~WT~eE~~~F~~~~~~~g-k~w~~Ia~~l~-~rt~~~~v~~Yy~~ 56 (61)
T 2eqr_A 4 GSSGDRQFMNVWTDHEKEIFKDKFIQHP-KNFGLIASYLE-RKSVPDCVLYYYLT 56 (61)
T ss_dssp SCCCCCSCCCSCCHHHHHHHHHHHHHST-TCHHHHHHHCT-TSCHHHHHHHHHHH
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHhC-CCHHHHHHHcC-CCCHHHHHHHHHHh
Confidence 3455666789999999999999999999 59999999999 99999999998654
No 63
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=98.71 E-value=1.2e-08 Score=88.45 Aligned_cols=49 Identities=16% Similarity=0.338 Sum_probs=45.9
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 66 KRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 66 kkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
..++||+||++.+++++.+||++|..||+.+++||..||+++|++..++
T Consensus 132 ~s~~WTeEE~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~~kKR 180 (235)
T 2iw5_B 132 CNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRR 180 (235)
T ss_dssp CCSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTTT
T ss_pred cCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999987755
No 64
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.53 E-value=1.5e-08 Score=73.48 Aligned_cols=51 Identities=18% Similarity=0.296 Sum_probs=44.0
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHhCC---CCceecccccCcccCccccchhcccccC
Q 045387 10 NGLKKGPWTAEEDQKLVDYIQKHGH---GRWRTLPKNAGLKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 10 ~~~kkg~WT~EEDe~L~~~V~~~G~---~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~ 62 (242)
.+.+.+.||.|||++|.+++.+|+. +.|..||+.+ ||+..+|+.||..+..
T Consensus 4 ~~~~~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l--gRt~~eV~~~y~~L~~ 57 (72)
T 2cqq_A 4 GSSGAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--GRSVTDVTTKAKQLKD 57 (72)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--TSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh--CCCHHHHHHHHHHHHH
Confidence 3456789999999999999999984 4699999997 5999999999987654
No 65
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=98.47 E-value=7.5e-08 Score=91.84 Aligned_cols=45 Identities=18% Similarity=0.347 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhh
Q 045387 68 GKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHI 112 (242)
Q Consensus 68 g~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l 112 (242)
.+||+||-+++++++.+||.+|..||..++.||..|||++|....
T Consensus 381 ~~WT~eE~~~f~~al~~yGkdw~~IA~~VgTKT~~Qvk~fy~~~k 425 (482)
T 2xag_B 381 ARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYR 425 (482)
T ss_dssp SCCCHHHHHHHHHHHHHHTTCHHHHHHHHSSCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHCcCHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 489999999999999999999999999999999999999997544
No 66
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.46 E-value=1.7e-07 Score=68.06 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=43.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhC----CcchhhcccCCCCCHHHHHHHHHHhhh
Q 045387 66 KRGKFSLEEEEAIIQLHKVLG----NKWSAIASRLPGRTDNEIKNYWNTHIK 113 (242)
Q Consensus 66 kkg~WT~EED~~L~~lv~~~G----~~W~~IA~~lpgRT~~q~k~rW~~~l~ 113 (242)
....||.+|+++|.++...|+ .+|.+||..++|||..+|+.||..+++
T Consensus 7 ~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 346899999999999999998 469999999999999999999987743
No 67
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=98.44 E-value=1.6e-07 Score=65.45 Aligned_cols=47 Identities=26% Similarity=0.444 Sum_probs=42.1
Q ss_pred CCCCCHHHHHHHHHHHHHh--------CCc-chhhcc-cCCCCCHHHHHHHHHHhhh
Q 045387 67 RGKFSLEEEEAIIQLHKVL--------GNK-WSAIAS-RLPGRTDNEIKNYWNTHIK 113 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~--------G~~-W~~IA~-~lpgRT~~q~k~rW~~~l~ 113 (242)
+.+||+|||..|+++|.++ |++ |..+++ .+|++|-.++|+||...|+
T Consensus 2 R~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k~l~ 58 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHHHcc
Confidence 5689999999999999999 544 999999 7999999999999987764
No 68
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.41 E-value=5.6e-08 Score=70.60 Aligned_cols=48 Identities=23% Similarity=0.445 Sum_probs=43.2
Q ss_pred cCCCCHHHHHHHHHHHHHhCC---CCceecccccCcccCccccchhcccccC
Q 045387 14 KGPWTAEEDQKLVDYIQKHGH---GRWRTLPKNAGLKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~G~---~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~ 62 (242)
...||.||+++|.+++..|+. ++|..||..+| +|+..+|+.||...+.
T Consensus 8 ~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~-gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 8 DKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVG-SRSPEECQRKYMENPR 58 (73)
T ss_dssp SSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTT-TSCHHHHHHHHHHSSS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcC-CCCHHHHHHHHHHHHh
Confidence 457999999999999999975 47999999999 9999999999988754
No 69
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=98.40 E-value=5.1e-08 Score=67.99 Aligned_cols=48 Identities=21% Similarity=0.492 Sum_probs=42.4
Q ss_pred cCCCCHHHHHHHHHHHHHh--------CCCCceeccc-ccCcccCccccchhcccccC
Q 045387 14 KGPWTAEEDQKLVDYIQKH--------GHGRWRTLPK-NAGLKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~--------G~~~W~~Ia~-~l~~~Rt~~qCr~Rw~~~L~ 62 (242)
+.+||+|||+.|+++|.++ |..-|..+++ .++ ++|-.+||+||.++|+
T Consensus 2 R~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~-~HtwqSwRdRy~k~l~ 58 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLT-QHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSS-SCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCC-CCCHHHHHHHHHHHcc
Confidence 5689999999999999999 4335999999 787 9999999999998875
No 70
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=98.35 E-value=1.3e-07 Score=82.08 Aligned_cols=51 Identities=24% Similarity=0.342 Sum_probs=46.0
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccC
Q 045387 10 NGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 10 ~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~ 62 (242)
.....++||+||++.+++++.+|| .+|..||+.++ +||..||+.+|.++.+
T Consensus 129 ~~k~s~~WTeEE~~lFleAl~kYG-KDW~~IAk~Vg-TKT~~QcKnfY~~~kK 179 (235)
T 2iw5_B 129 IQKCNARWTTEEQLLAVQAIRKYG-RDFQAISDVIG-NKSVVQVKNFFVNYRR 179 (235)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHS-SCHHHHHHHHS-SCCHHHHHHHHHHTTT
T ss_pred CCccCCCCCHHHHHHHHHHHHHHC-cCHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 335678999999999999999999 59999999999 9999999999988764
No 71
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=5.4e-06 Score=58.19 Aligned_cols=50 Identities=12% Similarity=0.217 Sum_probs=45.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcc-cCCCCCHHHHHHHHHHh
Q 045387 62 RPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIAS-RLPGRTDNEIKNYWNTH 111 (242)
Q Consensus 62 ~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~-~lpgRT~~q~k~rW~~~ 111 (242)
.|.++...||+||-++..+++.+||.+|..|++ .|++||..+|...|...
T Consensus 4 ~p~~~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~w 54 (63)
T 2yqk_A 4 GSSGIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYW 54 (63)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHHHTCSCHHHHHHHSCTTSCHHHHHHHHHHH
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHhCccHHHHHHHHcCCCcHHHHHHHHhcc
Confidence 366778899999999999999999999999999 58999999999988643
No 72
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=98.06 E-value=5.8e-06 Score=74.80 Aligned_cols=100 Identities=17% Similarity=0.225 Sum_probs=80.7
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccch-------hcccc---------------------------
Q 045387 15 GPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRL-------RWTNY--------------------------- 60 (242)
Q Consensus 15 g~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~-------Rw~~~--------------------------- 60 (242)
+.||..+...++.++.+||..+|..||..|+ +++...++. ||..+
T Consensus 111 ~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev~-~Kt~eEV~~Y~~vFw~ry~ei~d~ek~~~~IE~gE~ki~r~~~~~~~l 189 (304)
T 1ofc_X 111 TAWTKRDFNQFIKANEKYGRDDIDNIAKDVE-GKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKAL 189 (304)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCHHHHTTSST-TCCHHHHHHHHHHHHHHGGGCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHhHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5699999999999999999999999999998 899888752 22110
Q ss_pred ----------------cCCCCCCCCCCHHHHHHHHHHHHHhCC----cchhhcc------------cCCCCCHHHHHHHH
Q 045387 61 ----------------LRPDIKRGKFSLEEEEAIIQLHKVLGN----KWSAIAS------------RLPGRTDNEIKNYW 108 (242)
Q Consensus 61 ----------------L~p~lkkg~WT~EED~~L~~lv~~~G~----~W~~IA~------------~lpgRT~~q~k~rW 108 (242)
..+..++..||++||..|+-.+.+||. .|..|.. .+..||+.+|..|.
T Consensus 190 ~~Ki~~~~~P~~~L~i~y~~~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwf~kSRTp~el~rRc 269 (304)
T 1ofc_X 190 DQKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRC 269 (304)
T ss_dssp HHHHHTCSSHHHHCCCCCTTCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHH
T ss_pred HHHHHHhcCcHHHhccccCCCCCCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHH
Confidence 012234568999999999999999995 5999962 44679999999999
Q ss_pred HHhhhhH
Q 045387 109 NTHIKKK 115 (242)
Q Consensus 109 ~~~l~k~ 115 (242)
..+++-.
T Consensus 270 ~tLi~~i 276 (304)
T 1ofc_X 270 NTLITLI 276 (304)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888653
No 73
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=98.01 E-value=1e-06 Score=63.77 Aligned_cols=44 Identities=14% Similarity=0.356 Sum_probs=39.1
Q ss_pred cCCCCHHHHHHHHHHHHHhCCC---CceecccccCcccCccccchhcc
Q 045387 14 KGPWTAEEDQKLVDYIQKHGHG---RWRTLPKNAGLKRCGKSCRLRWT 58 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~G~~---~W~~Ia~~l~~~Rt~~qCr~Rw~ 58 (242)
.++||.||+++|..++..|+.+ .|.+||+.+| ||+..+|+.+|.
T Consensus 20 s~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~Vp-GKT~eEVk~hY~ 66 (74)
T 4eef_G 20 GRPWKFSENIAFEIALSFTNKDTPDRWKKVAQYVK-GRTPEEVKKHYE 66 (74)
T ss_dssp --CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGSC-SSCHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHcC-CCCHHHHHHHHH
Confidence 5679999999999999999754 7999999999 999999999985
No 74
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=97.97 E-value=1.6e-06 Score=62.80 Aligned_cols=43 Identities=21% Similarity=0.390 Sum_probs=38.3
Q ss_pred CCCCCHHHHHHHHHHHHHhCC----cchhhcccCCCCCHHHHHHHHH
Q 045387 67 RGKFSLEEEEAIIQLHKVLGN----KWSAIASRLPGRTDNEIKNYWN 109 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~G~----~W~~IA~~lpgRT~~q~k~rW~ 109 (242)
...||.||+++|.++...|+. +|.+||..|||||..+|+.+|.
T Consensus 20 s~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~VpGKT~eEVk~hY~ 66 (74)
T 4eef_G 20 GRPWKFSENIAFEIALSFTNKDTPDRWKKVAQYVKGRTPEEVKKHYE 66 (74)
T ss_dssp --CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGSCSSCHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence 458999999999999999984 6999999999999999999874
No 75
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=6.2e-06 Score=57.91 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=45.1
Q ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceeccc-ccCcccCccccchhccc
Q 045387 7 SDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPK-NAGLKRCGKSCRLRWTN 59 (242)
Q Consensus 7 ~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~-~l~~~Rt~~qCr~Rw~~ 59 (242)
+..|.++...||+||-++..+++.+||. +|..|++ .++ +|+..+|..-|..
T Consensus 2 ~~~p~~~~~~WT~eE~~~Fe~~l~~yGK-df~~I~~~~v~-~Kt~~~~v~fYY~ 53 (63)
T 2yqk_A 2 SSGSSGIEKCWTEDEVKRFVKGLRQYGK-NFFRIRKELLP-NKETGELITFYYY 53 (63)
T ss_dssp CCCCCCCCCSCCHHHHHHHHHHHHHTCS-CHHHHHHHSCT-TSCHHHHHHHHHH
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHhCc-cHHHHHHHHcC-CCcHHHHHHHHhc
Confidence 4567888899999999999999999996 9999999 588 9999999887743
No 76
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=97.84 E-value=1.5e-05 Score=59.90 Aligned_cols=48 Identities=17% Similarity=0.290 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHHHHHHhCC---cchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 68 GKFSLEEEEAIIQLHKVLGN---KWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 68 g~WT~EED~~L~~lv~~~G~---~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
--||.|||..|+..+++-|. .|..||+.|.+|+.+||++||+.+++=.
T Consensus 34 vlWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~Lf 84 (95)
T 1ug2_A 34 VLWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQLF 84 (95)
T ss_dssp SSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred EEeccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 36999999999999999996 7999999999999999999999887544
No 77
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=96.93 E-value=4.1e-06 Score=59.65 Aligned_cols=44 Identities=14% Similarity=0.351 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHhCC---cchhhcccCCCCCHHHHHHHHHHhhh
Q 045387 69 KFSLEEEEAIIQLHKVLGN---KWSAIASRLPGRTDNEIKNYWNTHIK 113 (242)
Q Consensus 69 ~WT~EED~~L~~lv~~~G~---~W~~IA~~lpgRT~~q~k~rW~~~l~ 113 (242)
-||.|||..|+..+++-|. .|+.||..| +|+++||++||..+++
T Consensus 16 lWTReeDR~IL~~cq~~G~s~~tfa~iA~~L-nks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 16 LWTRNDDRVILLECQKRGPSSKTFAYLAAKL-DKNPNQVSERFQQLMK 62 (70)
Confidence 5999999999999999996 699999999 9999999999987764
No 78
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=97.69 E-value=7e-05 Score=56.56 Aligned_cols=59 Identities=15% Similarity=0.271 Sum_probs=50.6
Q ss_pred hcccccCCCCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCC-----CCCHHHHHHHHHHhhhhHHHh
Q 045387 56 RWTNYLRPDIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLP-----GRTDNEIKNYWNTHIKKKLLR 118 (242)
Q Consensus 56 Rw~~~L~p~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lp-----gRT~~q~k~rW~~~l~k~~~k 118 (242)
.|..+|. ...||.||...|+++++.|+-+|..|+.++. .||..++|.||..+.++.+..
T Consensus 23 EY~~~L~----~~~WT~eETd~LfdLc~~fdlRw~vI~DRy~~~~~~~RtvEdLK~RYY~V~~~l~~~ 86 (93)
T 4iej_A 23 EYQLYLH----DDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANV 86 (93)
T ss_dssp HHHHHTC----BTTBCHHHHHHHHHHHHHTTTCHHHHHHHCCTTTSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC----CCCCCHHHHHHHHHHHHHcCCCeEEEeeccccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4445554 3689999999999999999999999999873 799999999999998887665
No 79
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=97.60 E-value=9.7e-05 Score=52.83 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHHHHhCCcchhhcc-cCCCCCHHHHHHHHHH
Q 045387 67 RGKFSLEEEEAIIQLHKVLGNKWSAIAS-RLPGRTDNEIKNYWNT 110 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~G~~W~~IA~-~lpgRT~~q~k~rW~~ 110 (242)
..+||+||-.+..+++..||.+|..|++ .|++||..+|...|..
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~ 52 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYM 52 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccHHHHHHHHcCCCCHHHHHHHHHh
Confidence 4589999999999999999999999999 5899999999998873
No 80
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=97.56 E-value=8.8e-05 Score=56.05 Aligned_cols=45 Identities=22% Similarity=0.177 Sum_probs=41.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHh
Q 045387 67 RGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTH 111 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~ 111 (242)
...||+||.++..+....||.+|..||..|++||..+|-..|...
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l~~Kt~~~cV~~YY~~ 87 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLT 87 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHTCTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHHhcc
Confidence 368999999999999999999999999999999999999988644
No 81
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=97.50 E-value=3.2e-05 Score=73.84 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=43.8
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccc
Q 045387 11 GLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNY 60 (242)
Q Consensus 11 ~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~ 60 (242)
.....+||.||-+++++++.+||. +|..||+.++ +|+..||+..|.++
T Consensus 377 ~~~~~~WT~eE~~~f~~al~~yGk-dw~~IA~~Vg-TKT~~Qvk~fy~~~ 424 (482)
T 2xag_B 377 QKCNARWTTEEQLLAVQAIRKYGR-DFQAISDVIG-NKSVVQVKNFFVNY 424 (482)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHTT-CHHHHHHHHS-SCCHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHHHHHCc-CHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 345789999999999999999995 9999999999 99999999998764
No 82
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=97.44 E-value=1.1e-05 Score=60.95 Aligned_cols=49 Identities=18% Similarity=0.321 Sum_probs=42.8
Q ss_pred CcCCCCHHHHHHHHHHHHHhCCCCceecccccC----cccCccccchhcccccC
Q 045387 13 KKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAG----LKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 13 kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~----~~Rt~~qCr~Rw~~~L~ 62 (242)
+..+||.||++.|.+++.+++. .|..|+..+. .+|+..+++.||..+.+
T Consensus 29 ~~~~WTkEETd~Lf~L~~~fdl-RW~vI~DRy~~~~~~~Rt~EdLK~RyY~v~~ 81 (93)
T 3hm5_A 29 HDDAWTKAETDHLFDLSRRFDL-RFVVIHDRYDHQQFKKRSVEDLKERYYHICA 81 (93)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTT-CHHHHHHHSCTTTSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCC-CeeeehhhhccCCCCCCCHHHHHHHHHHHHH
Confidence 4489999999999999999995 8999999883 37999999999987543
No 83
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=97.25 E-value=0.00011 Score=52.62 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=39.9
Q ss_pred CcCCCCHHHHHHHHHHHHHhCCCCceeccc-ccCcccCccccchhccc
Q 045387 13 KKGPWTAEEDQKLVDYIQKHGHGRWRTLPK-NAGLKRCGKSCRLRWTN 59 (242)
Q Consensus 13 kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~-~l~~~Rt~~qCr~Rw~~ 59 (242)
....||+||-++..+++.+||. +|..|++ .++ +|+..+|..-|..
T Consensus 7 ~~~~WT~eE~~~Fe~~l~~yGK-df~~I~~~~v~-~Kt~~~~v~fYY~ 52 (70)
T 2crg_A 7 GMEEWSASEACLFEEALEKYGK-DFNDIRQDFLP-WKSLTSIIEYYYM 52 (70)
T ss_dssp SSCCCCHHHHHHHHHHHHHTCS-CHHHHHHTTCS-SSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCc-cHHHHHHHHcC-CCCHHHHHHHHHh
Confidence 4567999999999999999996 9999999 588 9999999887753
No 84
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=97.25 E-value=0.0001 Score=55.66 Aligned_cols=43 Identities=12% Similarity=0.327 Sum_probs=39.4
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcc
Q 045387 14 KGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWT 58 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~ 58 (242)
...||+||.+++.++...||. +|..|+..++ +|+..+|...|.
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK-~F~~Ia~~l~-~Kt~~~cV~~YY 85 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPK-NFGLIASFLE-RKTVAECVLYYY 85 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTT-CHHHHHHTCT-TCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCC-CHHHHHHHcC-CCCHHHHHHHHh
Confidence 467999999999999999995 9999999998 999999988764
No 85
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=97.10 E-value=0.00032 Score=51.52 Aligned_cols=49 Identities=16% Similarity=0.439 Sum_probs=40.6
Q ss_pred CCCCCHHHHHHHHHHHHHhCC----------cchhhcccCC----CCCHHHHHHHHHHhhhhH
Q 045387 67 RGKFSLEEEEAIIQLHKVLGN----------KWSAIASRLP----GRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~G~----------~W~~IA~~lp----gRT~~q~k~rW~~~l~k~ 115 (242)
...||.+|-..|++++.++.. .|..||..|. .||+.||+.+|.++.+..
T Consensus 4 ~~~Wt~~Et~~Li~~~~e~~~~f~~~~~~~~~W~~Ia~~m~~~G~~rs~~qC~~K~~nL~k~Y 66 (86)
T 2ebi_A 4 AETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPDMCTDKWRNLLKEF 66 (86)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 468999999999999976421 4999999872 699999999999887553
No 86
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=96.89 E-value=0.00097 Score=56.29 Aligned_cols=103 Identities=13% Similarity=0.169 Sum_probs=67.5
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHhC--CCCceecccc--cCcccCccccch-------hccccc-----------------
Q 045387 10 NGLKKGPWTAEEDQKLVDYIQKHG--HGRWRTLPKN--AGLKRCGKSCRL-------RWTNYL----------------- 61 (242)
Q Consensus 10 ~~~kkg~WT~EEDe~L~~~V~~~G--~~~W~~Ia~~--l~~~Rt~~qCr~-------Rw~~~L----------------- 61 (242)
|.-....||..|-..|+.++.+|| .+.|..|+.. +. +++...+.. +....+
T Consensus 3 p~~~~~~~t~~E~r~fira~~kfG~~~~r~~~I~~da~L~-~Ks~~~v~~y~~~f~~~c~~~~~~~~~~~~~~~~~~~~~ 81 (211)
T 4b4c_A 3 PRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELV-DKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKV 81 (211)
T ss_dssp -----CCSCHHHHHHHHHHHTTCSSGGGCHHHHHHHTTCT-TSCHHHHHHHHHHHHHHHHHHHC----------------
T ss_pred CcccCCCCCHHHHHHHHHHHHHHCCchhHHHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccc
Confidence 344567899999999999999999 4689999853 33 555544432 000000
Q ss_pred -----------------------------------------------CCCCCCCCCCHHHHHHHHHHHHHhC-Ccchhhc
Q 045387 62 -----------------------------------------------RPDIKRGKFSLEEEEAIIQLHKVLG-NKWSAIA 93 (242)
Q Consensus 62 -----------------------------------------------~p~lkkg~WT~EED~~L~~lv~~~G-~~W~~IA 93 (242)
.+......||.+||..|+..+.+|| ++|..|.
T Consensus 82 ~~~~~~~~~v~~nA~~il~R~~~l~~L~~~v~~~~~~~~~~~i~~~~~~~~~~~~W~~~~D~~LL~Gi~k~G~g~w~~Ir 161 (211)
T 4b4c_A 82 KGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIK 161 (211)
T ss_dssp -CCEEEETTEEEEHHHHHHHHHHHHHHHHHSCSSHHHHHTCCCCSCCCCCCSSSCCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cchhhhhcccchhHHHHHHhHHHHHHHHHHHHhchhhHHHcCcCCCCCCCCCCCCccHHHHHHHHHHHHHHCcCcHHHHH
Confidence 0111124699999999999999999 8998886
Q ss_pred cc--C------------CCCCHHHHHHHHHHhhh
Q 045387 94 SR--L------------PGRTDNEIKNYWNTHIK 113 (242)
Q Consensus 94 ~~--l------------pgRT~~q~k~rW~~~l~ 113 (242)
.- + ..++...+..|...+|+
T Consensus 162 ~D~~l~~~~k~~~~~~~k~p~a~~L~rR~~~Ll~ 195 (211)
T 4b4c_A 162 MDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIK 195 (211)
T ss_dssp HCSSSSCTTTSSCSSTTSSCCHHHHHHHHHHHHH
T ss_pred hChhcCccccccccccccCCChHHHHHHHHHHHH
Confidence 52 1 12456678888776664
No 87
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=96.69 E-value=0.0031 Score=58.36 Aligned_cols=104 Identities=17% Similarity=0.227 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccch-------hcccc---------------------------
Q 045387 15 GPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRL-------RWTNY--------------------------- 60 (242)
Q Consensus 15 g~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~-------Rw~~~--------------------------- 60 (242)
+.||.-+=..++.++.+||..+-..||..|+.+++...++. ||..+
T Consensus 124 ~~WnrrDF~~FI~a~~kyGR~d~~~IA~ev~~~Kt~eEV~~Y~~vFw~Ry~Ei~d~erii~~IEkgE~ki~r~~~~~~~L 203 (374)
T 2y9y_A 124 TNWNKLEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVRAYAKAFWSNIERIEDYEKYLKIIENEEEKIKRVKMQQEAL 203 (374)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTCHHHHHSSCCCSSSHHHHHHHHHHHHHTCSSCSCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCHhHHHHHHHHHccCCCHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999889999999965677777761 11111
Q ss_pred -------------c----CCC-CCCCCCCHHHHHHHHHHHHHhC----Ccchhhccc------------CCCCCHHHHHH
Q 045387 61 -------------L----RPD-IKRGKFSLEEEEAIIQLHKVLG----NKWSAIASR------------LPGRTDNEIKN 106 (242)
Q Consensus 61 -------------L----~p~-lkkg~WT~EED~~L~~lv~~~G----~~W~~IA~~------------lpgRT~~q~k~ 106 (242)
| .++ .++..||++||..|+-++.+|| +.|.+|-.. +..||+..|..
T Consensus 204 ~~Ki~~y~~P~~~L~i~y~~~~~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwF~kSRT~~EL~r 283 (374)
T 2y9y_A 204 RRKLSEYKNPFFDLKLKHPPSSNNKRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELAR 283 (374)
T ss_dssp HHHHTTCSSHHHHCCCSSCCCCSSCCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHCSGGGSCHHHHTCCHHHHHH
T ss_pred HHHHHHccCCHHHceeccCCCCCCCCccCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCcchhhhHHHhcCCHHHHHH
Confidence 1 111 1345799999999999999999 459998432 46799999999
Q ss_pred HHHHhhhhHHHh
Q 045387 107 YWNTHIKKKLLR 118 (242)
Q Consensus 107 rW~~~l~k~~~k 118 (242)
|...+++-..+.
T Consensus 284 Rc~tLi~~IeKE 295 (374)
T 2y9y_A 284 RGNTLLQCLEKE 295 (374)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 999998665443
No 88
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=96.58 E-value=0.00016 Score=53.16 Aligned_cols=49 Identities=20% Similarity=0.584 Sum_probs=39.0
Q ss_pred CcCCCCHHHHHHHHHHHHHhCC---------CCceeccccc---CcccCccccchhccccc
Q 045387 13 KKGPWTAEEDQKLVDYIQKHGH---------GRWRTLPKNA---GLKRCGKSCRLRWTNYL 61 (242)
Q Consensus 13 kkg~WT~EEDe~L~~~V~~~G~---------~~W~~Ia~~l---~~~Rt~~qCr~Rw~~~L 61 (242)
+...||.+|...|+++...+.. .-|..||..| |..|++.||+.+|.++.
T Consensus 3 R~~~Wt~~Et~~Li~~~~e~~~~f~~~~~~~~~W~~Ia~~m~~~G~~rs~~qC~~K~~nL~ 63 (86)
T 2ebi_A 3 RAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPDMCTDKWRNLL 63 (86)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 4678999999999999876321 1599999875 45799999999998753
No 89
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=95.22 E-value=0.00075 Score=48.01 Aligned_cols=48 Identities=17% Similarity=0.263 Sum_probs=41.3
Q ss_pred CcCCCCHHHHHHHHHHHHHhCC--CCceecccccCcccCccccchhcccccC
Q 045387 13 KKGPWTAEEDQKLVDYIQKHGH--GRWRTLPKNAGLKRCGKSCRLRWTNYLR 62 (242)
Q Consensus 13 kkg~WT~EEDe~L~~~V~~~G~--~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~ 62 (242)
.--.||.|||..++...++.|. .-|..||+.+ +|++.|+..||...++
T Consensus 13 ~vvlWTReeDR~IL~~cq~~G~s~~tfa~iA~~L--nks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 13 IIILWTRNDDRVILLECQKRGPSSKTFAYLAAKL--DKNPNQVSERFQQLMK 62 (70)
Confidence 3456999999999999999986 3699999888 5999999999988654
No 90
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=96.11 E-value=0.0016 Score=48.80 Aligned_cols=48 Identities=19% Similarity=0.355 Sum_probs=41.7
Q ss_pred CCcCCCCHHHHHHHHHHHHHhCC--CCceecccccCcccCccccchhcccc
Q 045387 12 LKKGPWTAEEDQKLVDYIQKHGH--GRWRTLPKNAGLKRCGKSCRLRWTNY 60 (242)
Q Consensus 12 ~kkg~WT~EEDe~L~~~V~~~G~--~~W~~Ia~~l~~~Rt~~qCr~Rw~~~ 60 (242)
-+--.||.|||..++...++.|. ..|..||+.++ +|++.|+.+|++..
T Consensus 31 e~VvlWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~-Nks~nqV~~RFq~L 80 (95)
T 1ug2_A 31 EKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLG-NKTPVEVSHRFREL 80 (95)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred CEEEEeccccCHHHHHHHHhcCCChhHHHHHHHHHc-cCCHHHHHHHHHHH
Confidence 34456999999999999999985 36999999998 99999999999763
No 91
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=95.72 E-value=0.0083 Score=50.47 Aligned_cols=39 Identities=26% Similarity=0.452 Sum_probs=31.9
Q ss_pred CCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCCceecccc
Q 045387 5 PSSDKNGLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKN 43 (242)
Q Consensus 5 ~~~~k~~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~ 43 (242)
|...++.-....||.+||..|+.+|.+||.++|..|-.-
T Consensus 125 ~~~~~~~~~~~~W~~~~D~~LL~Gi~k~G~g~w~~Ir~D 163 (211)
T 4b4c_A 125 PCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMD 163 (211)
T ss_dssp CSCCCCCCSSSCCCHHHHHHHHHHHHHHCTTCHHHHHHC
T ss_pred CCCCCCCCCCCCccHHHHHHHHHHHHHHCcCcHHHHHhC
Confidence 444455555667999999999999999999999998763
No 92
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=94.94 E-value=0.047 Score=38.31 Aligned_cols=48 Identities=13% Similarity=0.055 Sum_probs=40.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCc---chhhcccC--CCCCHHHHHHHHHHhh
Q 045387 65 IKRGKFSLEEEEAIIQLHKVLGNK---WSAIASRL--PGRTDNEIKNYWNTHI 112 (242)
Q Consensus 65 lkkg~WT~EED~~L~~lv~~~G~~---W~~IA~~l--pgRT~~q~k~rW~~~l 112 (242)
..+-.||+|.....+++|..+|.. +..|.+.| +|.|..+|+.+...+.
T Consensus 5 k~r~~WT~elH~~Fv~Av~~LG~~~AtPk~Il~~M~v~gLT~~~VkSHLQKYR 57 (64)
T 1irz_A 5 KPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFR 57 (64)
T ss_dssp CSSCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHhCCCCCCcHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 456789999999999999999955 67887775 7999999999887553
No 93
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=94.12 E-value=0.016 Score=43.59 Aligned_cols=49 Identities=20% Similarity=0.352 Sum_probs=41.0
Q ss_pred CCcCCCCHHHHHHHHHHHHHhCCCCceecccccC----cccCccccchhccccc
Q 045387 12 LKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAG----LKRCGKSCRLRWTNYL 61 (242)
Q Consensus 12 ~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~----~~Rt~~qCr~Rw~~~L 61 (242)
++...||.||...|.+++.++.- .|.-|+.... ..|+..+.++||..+.
T Consensus 28 L~~~~WT~eETd~LfdLc~~fdl-Rw~vI~DRy~~~~~~~RtvEdLK~RYY~V~ 80 (93)
T 4iej_A 28 LHDDAWTKAETDHLFDLSRRFDL-RFVVIHDRYDHQQFKKRSVEDLKERYYHIC 80 (93)
T ss_dssp TCBTTBCHHHHHHHHHHHHHTTT-CHHHHHHHCCTTTSCCCCHHHHHHHHHHHH
T ss_pred hCCCCCCHHHHHHHHHHHHHcCC-CeEEEeeccccCCCCCCCHHHHHHHHHHHH
Confidence 34568999999999999999996 8999998763 2689999999997754
No 94
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=93.61 E-value=0.056 Score=47.93 Aligned_cols=29 Identities=38% Similarity=0.683 Sum_probs=26.8
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCceeccc
Q 045387 14 KGPWTAEEDQKLVDYIQKHGHGRWRTLPK 42 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~G~~~W~~Ia~ 42 (242)
...|+.+||.+|+..|.+||.|+|..|..
T Consensus 168 ~c~W~~~dD~~LLvGIykyGyG~We~Ir~ 196 (270)
T 2xb0_X 168 SSNWTKEEDEKLLIGVFKYGYGSWTQIRD 196 (270)
T ss_dssp SSCCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCcChHHHHHHHHHHHHHcCCcHHHHhc
Confidence 35699999999999999999999999985
No 95
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=92.56 E-value=0.2 Score=45.10 Aligned_cols=46 Identities=17% Similarity=0.315 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHHHhC-CcchhhcccCCCCCHHHHHHHHHHhhh
Q 045387 68 GKFSLEEEEAIIQLHKVLG-NKWSAIASRLPGRTDNEIKNYWNTHIK 113 (242)
Q Consensus 68 g~WT~EED~~L~~lv~~~G-~~W~~IA~~lpgRT~~q~k~rW~~~l~ 113 (242)
+.||..+....+.++.+|| .+|..||..|+|+|...|+.+......
T Consensus 111 ~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev~~Kt~eEV~~Y~~vFw~ 157 (304)
T 1ofc_X 111 TAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFWE 157 (304)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCHHHHTTSSTTCCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 5799999999999999999 579999999999999999877665543
No 96
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=88.79 E-value=0.26 Score=43.67 Aligned_cols=27 Identities=22% Similarity=0.447 Sum_probs=24.6
Q ss_pred CCCCHHHHHHHHHHHHHhC-Ccchhhcc
Q 045387 68 GKFSLEEEEAIIQLHKVLG-NKWSAIAS 94 (242)
Q Consensus 68 g~WT~EED~~L~~lv~~~G-~~W~~IA~ 94 (242)
+.|+.+||..|+..|.+|| +.|..|..
T Consensus 169 c~W~~~dD~~LLvGIykyGyG~We~Ir~ 196 (270)
T 2xb0_X 169 SNWTKEEDEKLLIGVFKYGYGSWTQIRD 196 (270)
T ss_dssp SCCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHcCCcHHHHhc
Confidence 4699999999999999999 89999964
No 97
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=84.79 E-value=0.39 Score=33.53 Aligned_cols=48 Identities=13% Similarity=0.185 Sum_probs=35.4
Q ss_pred CCcCCCCHHHHHHHHHHHHHhCCCC---ceecccccCc-ccCccccchhcccc
Q 045387 12 LKKGPWTAEEDQKLVDYIQKHGHGR---WRTLPKNAGL-KRCGKSCRLRWTNY 60 (242)
Q Consensus 12 ~kkg~WT~EEDe~L~~~V~~~G~~~---W~~Ia~~l~~-~Rt~~qCr~Rw~~~ 60 (242)
..+-.||+|..+++.++|...|. + ++.|.+.|+. +.|..++..|.++|
T Consensus 5 k~r~~WT~elH~~Fv~Av~~LG~-~~AtPk~Il~~M~v~gLT~~~VkSHLQKY 56 (64)
T 1irz_A 5 KPRVLWTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp CSSCSSCHHHHHHHHHHHHHHCT-TTCCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHhCC-CCCCcHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 45667999999999999999994 4 5567666542 56777777665544
No 98
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=70.96 E-value=2.2 Score=39.38 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=28.0
Q ss_pred CcCCCCHHHHHHHHHHHHHhCC---CCceeccccc
Q 045387 13 KKGPWTAEEDQKLVDYIQKHGH---GRWRTLPKNA 44 (242)
Q Consensus 13 kkg~WT~EEDe~L~~~V~~~G~---~~W~~Ia~~l 44 (242)
++..||.+||..|+-++.+||. ++|..|-..+
T Consensus 227 k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~I 261 (374)
T 2y9y_A 227 NKRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEI 261 (374)
T ss_dssp SCCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhccCCCChHHHHHHHH
Confidence 4567999999999999999999 8999996543
No 99
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=69.34 E-value=1.2 Score=34.59 Aligned_cols=56 Identities=16% Similarity=0.270 Sum_probs=38.8
Q ss_pred HHHHHHHhCC-------CCceecccccCcccCc----cccchhcccccCCCCCCCCCCHHHHHHHHHHHH
Q 045387 25 LVDYIQKHGH-------GRWRTLPKNAGLKRCG----KSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHK 83 (242)
Q Consensus 25 L~~~V~~~G~-------~~W~~Ia~~l~~~Rt~----~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~ 83 (242)
|..+|.+.|. +.|..||..|+...+. ...+..|.++|.|- ..++++|-..|.+-|.
T Consensus 47 Ly~~V~~~GG~~~Vt~~k~W~~Va~~lg~p~~~~sa~~~Lr~~Y~k~L~~Y---E~~~~~e~~~l~~~v~ 113 (121)
T 2rq5_A 47 FFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSY---DSLSPEEHRRLEKEVL 113 (121)
T ss_dssp HHHHHHHTTSHHHHHHTTCHHHHHHHTCCCTTCSSHHHHHHHHHHTTHHHH---HHCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHhcccCcHHHHHHHhCCCCCcCcHHHHHHHHHHHHhHHH---HCcCHHHHhhHHHHHH
Confidence 4445555551 2699999998754432 45688899998763 2488899999887664
No 100
>3cz6_A DNA-binding protein RAP1; helical bundle, activator, chromosomal protein, nucleus, phosphoprotein, repressor, telomere; HET: MES; 1.85A {Saccharomyces cerevisiae} PDB: 3owt_A
Probab=61.52 E-value=6.7 Score=32.14 Aligned_cols=25 Identities=32% Similarity=0.626 Sum_probs=20.0
Q ss_pred CCCCcCCCCHHHHHHHH--------HHHHHhCC
Q 045387 10 NGLKKGPWTAEEDQKLV--------DYIQKHGH 34 (242)
Q Consensus 10 ~~~kkg~WT~EEDe~L~--------~~V~~~G~ 34 (242)
|.-..|-||+|+|+.|. +++++||.
T Consensus 110 P~N~pGIWT~eDDe~L~s~d~~dikrL~kKHG~ 142 (168)
T 3cz6_A 110 PPNVPGIWTHDDDESLKSNDQEQIRKLVKKHGT 142 (168)
T ss_dssp CTTCTTCCCHHHHHHHHSCCHHHHHHHHHHHCH
T ss_pred CCCCCCCCChhhHHHHHcCCHHHHHHHHHHhCH
Confidence 44567889999999986 67888883
No 101
>2o8x_A Probable RNA polymerase sigma-C factor; promoter recognition, transcription regulation, helix-turn-H motif, transcription; 3.00A {Mycobacterium tuberculosis}
Probab=52.09 E-value=10 Score=24.76 Aligned_cols=44 Identities=14% Similarity=0.205 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 70 FSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 70 WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
++ +.+..++.++...|-.+.+||..+ |-+...|+.+....+++-
T Consensus 16 L~-~~~r~il~l~~~~g~s~~eIA~~l-gis~~tv~~~~~ra~~~l 59 (70)
T 2o8x_A 16 LT-TDQREALLLTQLLGLSYADAAAVC-GCPVGTIRSRVARARDAL 59 (70)
T ss_dssp SC-HHHHHHHHHHHTSCCCHHHHHHHH-TSCHHHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHcCCCHHHHHHHH-CcCHHHHHHHHHHHHHHH
Confidence 44 445555666667788899999999 889999998877665443
No 102
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=50.78 E-value=2.2 Score=32.56 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=28.6
Q ss_pred HHHHHHHHhCC-------CCceecccccCcccCccccchhcccccCC
Q 045387 24 KLVDYIQKHGH-------GRWRTLPKNAGLKRCGKSCRLRWTNYLRP 63 (242)
Q Consensus 24 ~L~~~V~~~G~-------~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p 63 (242)
+|..+|.+.|. +.|..||..++... +..++..|.++|.|
T Consensus 53 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~-~~~Lr~~Y~k~L~~ 98 (116)
T 2li6_A 53 YLYMLVQKFGGADQVTRTQQWSMVAQRLQISD-YQQLESIYFRILLP 98 (116)
T ss_dssp HHHHHHHHHTSHHHHHHTTCHHHHHHHHTSCC-TTHHHHHHHHHHSH
T ss_pred HHHHHHHHhcCHHHccccCcHHHHHHHhCCCh-HHHHHHHHHHHHHH
Confidence 46677777762 26999999988444 77788888887764
No 103
>1ku3_A Sigma factor SIGA; helix-turn-helix, transcription; 1.80A {Thermus aquaticus} SCOP: a.4.13.2 PDB: 1ku7_A 1rio_H 3n97_A*
Probab=49.05 E-value=12 Score=25.11 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHHH----hCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 70 FSLEEEEAIIQLHKV----LGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 70 WT~EED~~L~~lv~~----~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
.++.| ..++.+... .|-.+.+||..+ |-+...|+.+....+++-
T Consensus 11 L~~~e-r~il~l~~~l~~~~~~s~~eIA~~l-~is~~tV~~~~~ra~~kL 58 (73)
T 1ku3_A 11 LSERE-AMVLKMRKGLIDGREHTLEEVGAYF-GVTRERIRQIENKALRKL 58 (73)
T ss_dssp SCHHH-HHHHHHHHTTTTSSCCCHHHHHHHH-TCCHHHHHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHhcccCCCCCHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 44444 444545544 567899999999 899999999887766554
No 104
>1u78_A TC3 transposase, transposable element TC3 transposase; transposon DNA, bipartite DNA-binding, HTH- motif, DNA binding protein/DNA complex; 2.69A {Caenorhabditis elegans} SCOP: a.4.1.2 a.4.1.2
Probab=46.70 E-value=66 Score=23.50 Aligned_cols=86 Identities=14% Similarity=0.115 Sum_probs=50.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccC-C-----CCCCCCCCHHHHHHHHHHHHHhC-Cc
Q 045387 16 PWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLR-P-----DIKRGKFSLEEEEAIIQLHKVLG-NK 88 (242)
Q Consensus 16 ~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~-p-----~lkkg~WT~EED~~L~~lv~~~G-~~ 88 (242)
..|.++-..++.++ ..|. .-..||+.++ .+...++ ||.+... . .-.....+++++..|+.+ ...+ -.
T Consensus 6 ~~s~~~r~~i~~~~-~~G~-s~~~ia~~lg--is~~Tv~-r~~~~~~~~g~~~~~gr~~~l~~~~~~~i~~~-~~~~~~s 79 (141)
T 1u78_A 6 ALSDTERAQLDVMK-LLNV-SLHEMSRKIS--RSRHCIR-VYLKDPVSYGTSKRAPRRKALSVRDERNVIRA-ASNSCKT 79 (141)
T ss_dssp CCCHHHHHHHHHHH-HTTC-CHHHHHHHHT--CCHHHHH-HHHHSGGGTTCCCCCCCCCSSCHHHHHHHHHH-HHHCCCC
T ss_pred cCCHHHHHHHHHHH-HcCC-CHHHHHHHHC--cCHHHHH-HHHHcccccCCcCCCCCCCcCCHHHHHHHHHH-HhCCCCC
Confidence 47888888887777 4563 6789999887 4444443 3332211 1 112235888888888877 3333 22
Q ss_pred chhhcccCCC--CCHHHHHHHH
Q 045387 89 WSAIASRLPG--RTDNEIKNYW 108 (242)
Q Consensus 89 W~~IA~~lpg--RT~~q~k~rW 108 (242)
=..|+..+ | -+...|....
T Consensus 80 ~~~i~~~l-g~~~s~~tV~r~l 100 (141)
T 1u78_A 80 ARDIRNEL-QLSASKRTILNVI 100 (141)
T ss_dssp HHHHHHHT-TCCSCHHHHHHHH
T ss_pred HHHHHHHH-CCCccHHHHHHHH
Confidence 35677766 3 4555555433
No 105
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=45.39 E-value=3.6 Score=31.47 Aligned_cols=40 Identities=18% Similarity=0.380 Sum_probs=27.5
Q ss_pred HHHHHHHHhCC-------CCceecccccCcccC---ccccchhcccccCC
Q 045387 24 KLVDYIQKHGH-------GRWRTLPKNAGLKRC---GKSCRLRWTNYLRP 63 (242)
Q Consensus 24 ~L~~~V~~~G~-------~~W~~Ia~~l~~~Rt---~~qCr~Rw~~~L~p 63 (242)
+|..+|.+.|. +.|..|+..|+...+ +...+..|.++|.|
T Consensus 44 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~a~~~Lk~~Y~k~L~~ 93 (117)
T 2jrz_A 44 SLSKIVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYP 93 (117)
T ss_dssp HHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCTTCTHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHccCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 56777877772 269999999875432 34567777777654
No 106
>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=45.03 E-value=18 Score=25.39 Aligned_cols=40 Identities=25% Similarity=0.312 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 74 EEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 74 ED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
.+..++.++...|-.-.+||..| |-+...|+.+....+++
T Consensus 41 ~~r~vl~l~~~~g~s~~eIA~~l-gis~~tV~~~l~ra~~~ 80 (92)
T 3hug_A 41 EHRAVIQRSYYRGWSTAQIATDL-GIAEGTVKSRLHYAVRA 80 (92)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 34445555555677889999999 88999998887755533
No 107
>3cz6_A DNA-binding protein RAP1; helical bundle, activator, chromosomal protein, nucleus, phosphoprotein, repressor, telomere; HET: MES; 1.85A {Saccharomyces cerevisiae} PDB: 3owt_A
Probab=44.25 E-value=20 Score=29.40 Aligned_cols=27 Identities=11% Similarity=0.268 Sum_probs=18.8
Q ss_pred cchhcccccC-CCCCCCCCCHHHHHHHH
Q 045387 53 CRLRWTNYLR-PDIKRGKFSLEEEEAII 79 (242)
Q Consensus 53 Cr~Rw~~~L~-p~lkkg~WT~EED~~L~ 79 (242)
+...|..-.. |....|-||.|+|+.|.
T Consensus 99 VL~~l~~GkgiP~N~pGIWT~eDDe~L~ 126 (168)
T 3cz6_A 99 FLNMFKDNVNPPPNVPGIWTHDDDESLK 126 (168)
T ss_dssp HHHHHHHTCSSCTTCTTCCCHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCCCChhhHHHHH
Confidence 3444444333 45678999999999987
No 108
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=43.87 E-value=4 Score=30.51 Aligned_cols=40 Identities=18% Similarity=0.360 Sum_probs=27.8
Q ss_pred HHHHHHHHhCC-------CCceecccccCcccC----ccccchhcccccCC
Q 045387 24 KLVDYIQKHGH-------GRWRTLPKNAGLKRC----GKSCRLRWTNYLRP 63 (242)
Q Consensus 24 ~L~~~V~~~G~-------~~W~~Ia~~l~~~Rt----~~qCr~Rw~~~L~p 63 (242)
+|..+|.+.|. +.|..||..|+...+ +...+..|.++|.+
T Consensus 37 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~s~~~~Lk~~Y~k~L~~ 87 (107)
T 1ig6_A 37 TMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILP 87 (107)
T ss_dssp HHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHHHHHTTT
T ss_pred HHHHHHHHhcCHHHhcccCcHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHH
Confidence 46667777662 279999999874332 35677888888765
No 109
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=43.85 E-value=27 Score=25.69 Aligned_cols=39 Identities=15% Similarity=0.352 Sum_probs=27.3
Q ss_pred HHHHHHHHhCC--------cchhhcccCCCCC----HHHHHHHHHHhhhhH
Q 045387 77 AIIQLHKVLGN--------KWSAIASRLPGRT----DNEIKNYWNTHIKKK 115 (242)
Q Consensus 77 ~L~~lv~~~G~--------~W~~IA~~lpgRT----~~q~k~rW~~~l~k~ 115 (242)
.|..+|.+.|+ .|..||..|.--. ...+|..|..+|-+.
T Consensus 48 ~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~~~~~lk~~Y~k~L~~y 98 (107)
T 2lm1_A 48 TLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPF 98 (107)
T ss_dssp HHHHHHHHHTCHHHHHHHTTHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHhHHH
Confidence 36666666763 6999999983222 467888888887653
No 110
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=42.92 E-value=3.7 Score=31.79 Aligned_cols=40 Identities=23% Similarity=0.448 Sum_probs=27.7
Q ss_pred HHHHHHHHhCC-------CCceecccccCcccC----ccccchhcccccCC
Q 045387 24 KLVDYIQKHGH-------GRWRTLPKNAGLKRC----GKSCRLRWTNYLRP 63 (242)
Q Consensus 24 ~L~~~V~~~G~-------~~W~~Ia~~l~~~Rt----~~qCr~Rw~~~L~p 63 (242)
+|..+|.+.|. +.|..|+..|+...+ +...+..|.++|.|
T Consensus 56 ~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~~~~sa~~~Lk~~Y~k~L~~ 106 (128)
T 1c20_A 56 ELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYP 106 (128)
T ss_dssp HHHHHHHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHhcCHHHcCccCcHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHH
Confidence 46677777762 269999999875443 34567778877765
No 111
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=42.59 E-value=12 Score=28.30 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=28.8
Q ss_pred HHHHHHHhCC--------cchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 78 IIQLHKVLGN--------KWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 78 L~~lv~~~G~--------~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
|..+|.+.|+ .|..||..|.--....++..|..+|-+.
T Consensus 54 Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~Lr~~Y~k~L~~y 99 (116)
T 2li6_A 54 LYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFRILLPY 99 (116)
T ss_dssp HHHHHHHHTSHHHHHHTTCHHHHHHHHTSCCTTHHHHHHHHHHSHH
T ss_pred HHHHHHHhcCHHHccccCcHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 6677777774 6999999873333788999999888553
No 112
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=42.28 E-value=26 Score=26.49 Aligned_cols=39 Identities=13% Similarity=0.296 Sum_probs=28.0
Q ss_pred HHHHHHHHhCC--------cchhhcccCCCCC----HHHHHHHHHHhhhhH
Q 045387 77 AIIQLHKVLGN--------KWSAIASRLPGRT----DNEIKNYWNTHIKKK 115 (242)
Q Consensus 77 ~L~~lv~~~G~--------~W~~IA~~lpgRT----~~q~k~rW~~~l~k~ 115 (242)
+|..+|.+.|+ .|..||..|.--. ...+|..|..+|-+.
T Consensus 44 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~a~~~Lk~~Y~k~L~~y 94 (117)
T 2jrz_A 44 SLSKIVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPY 94 (117)
T ss_dssp HHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCTTCTHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHccCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 46677777773 6999999982221 567899998888663
No 113
>2p7v_B Sigma-70, RNA polymerase sigma factor RPOD; RSD, regulator of sigma 70, sigma 70 domain 4, transcription, regulation, helix-turn-helix; 2.60A {Escherichia coli} SCOP: a.4.13.2
Probab=40.68 E-value=15 Score=24.33 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=29.4
Q ss_pred HHHHHHHHHH----HhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 74 EEEAIIQLHK----VLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 74 ED~~L~~lv~----~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
.+..++.+.. ..|-.+.+||..+ |-+...|+.+....+++-
T Consensus 9 ~er~il~l~~~l~~~~g~s~~eIA~~l-gis~~tV~~~~~ra~~kL 53 (68)
T 2p7v_B 9 REAKVLRMRFGIDMNTDYTLEEVGKQF-DVTRERIRQIEAKALRKL 53 (68)
T ss_dssp HHHHHHHHHTTTTSSSCCCHHHHHHHH-TCCHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHccCCCCCCCHHHHHHHH-CcCHHHHHHHHHHHHHHH
Confidence 3444444443 2467899999999 999999999887766543
No 114
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=39.83 E-value=12 Score=29.80 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=27.0
Q ss_pred eecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHH
Q 045387 38 RTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQ 80 (242)
Q Consensus 38 ~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~ 80 (242)
..||..+. |+++.+||..+ ++.. .||+||++.+.+
T Consensus 119 ~~vA~~ik-gkt~eeir~~f------~I~n-d~t~eEe~~ir~ 153 (160)
T 2p1m_A 119 QTVADMIK-GKTPEEIRTTF------NIKN-DFTPEEEEEVRR 153 (160)
T ss_dssp HHHHHTTT-TCCHHHHHHHT------TCCC-CCCHHHHHHHHH
T ss_pred HHHHHHHc-CCCHHHHHHHc------CCCC-CCCHHHHHHHHH
Confidence 57787887 99999999875 2333 599999998764
No 115
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=37.02 E-value=4.9 Score=29.32 Aligned_cols=40 Identities=18% Similarity=0.381 Sum_probs=25.5
Q ss_pred HHHHHHHHhCC-------CCceecccccCcccC---ccccchhcccccCC
Q 045387 24 KLVDYIQKHGH-------GRWRTLPKNAGLKRC---GKSCRLRWTNYLRP 63 (242)
Q Consensus 24 ~L~~~V~~~G~-------~~W~~Ia~~l~~~Rt---~~qCr~Rw~~~L~p 63 (242)
+|..+|.+.|. +.|..|+..++...+ +...+..|.++|.|
T Consensus 40 ~Ly~~V~~~GG~~~V~~~~~W~~v~~~lg~~~~~~~~~~Lk~~Y~k~L~~ 89 (96)
T 2jxj_A 40 ALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYP 89 (96)
T ss_dssp HHHHHHHHHHTTHHHHHHTTHHHHHHHHTCCSCSCHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHcCCHHHHccCCcHHHHHHHhCCCCcCcHHHHHHHHHHHHHHH
Confidence 45566666651 269999998874332 34567777777643
No 116
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=37.02 E-value=35 Score=26.01 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=27.8
Q ss_pred HHHHHHHHhCC--------cchhhcccCCCCC----HHHHHHHHHHhhhhH
Q 045387 77 AIIQLHKVLGN--------KWSAIASRLPGRT----DNEIKNYWNTHIKKK 115 (242)
Q Consensus 77 ~L~~lv~~~G~--------~W~~IA~~lpgRT----~~q~k~rW~~~l~k~ 115 (242)
+|..+|.++|+ .|.+||..|.--+ ...+|..|..+|.+.
T Consensus 55 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~s~~~~Lk~~Y~k~L~~y 105 (125)
T 2cxy_A 55 RLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAF 105 (125)
T ss_dssp HHHHHHHHHTSHHHHHHHTCHHHHHHHTTSCSSHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHcCCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 36667777763 6999999982222 457899999888664
No 117
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=36.71 E-value=37 Score=25.87 Aligned_cols=39 Identities=18% Similarity=0.340 Sum_probs=27.5
Q ss_pred HHHHHHHHhCC--------cchhhcccCCCC--C--HHHHHHHHHHhhhhH
Q 045387 77 AIIQLHKVLGN--------KWSAIASRLPGR--T--DNEIKNYWNTHIKKK 115 (242)
Q Consensus 77 ~L~~lv~~~G~--------~W~~IA~~lpgR--T--~~q~k~rW~~~l~k~ 115 (242)
+|..+|.+.|+ .|..||..|.-- + ...+|..|..+|-+.
T Consensus 46 ~Ly~~V~~~GG~~~V~~~k~W~~V~~~lg~~~~~~~~~~Lr~~Y~k~L~~y 96 (122)
T 2eqy_A 46 QLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPY 96 (122)
T ss_dssp HHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCSSSHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHccCHHHHcCCCcHHHHHHHhCCCCCCcHHHHHHHHHHHHhHHH
Confidence 36667777774 699999998221 2 357888898888663
No 118
>1kkx_A Transcription regulatory protein ADR6; ARID, DNA-binding domain, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.4.3.1 PDB: 1kn5_A
Probab=35.61 E-value=18 Score=27.87 Aligned_cols=40 Identities=18% Similarity=0.285 Sum_probs=28.7
Q ss_pred HHHHHHHhCC--------cchhhcccCCCCCHHHHHHHHHHhhhhHHH
Q 045387 78 IIQLHKVLGN--------KWSAIASRLPGRTDNEIKNYWNTHIKKKLL 117 (242)
Q Consensus 78 L~~lv~~~G~--------~W~~IA~~lpgRT~~q~k~rW~~~l~k~~~ 117 (242)
|..+|.+.|+ .|..||..|.--....+|..|..+|-+.-.
T Consensus 53 Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~~~~Lr~~Y~k~L~~yE~ 100 (123)
T 1kkx_A 53 LYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFRILLPYER 100 (123)
T ss_dssp HHHHHTTTSCHHHHTTSHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHhccccccHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence 5555555553 599999987333388999999988877543
No 119
>2q1z_A RPOE, ECF SIGE; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_A
Probab=34.69 E-value=37 Score=26.14 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=24.8
Q ss_pred HhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 84 VLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 84 ~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
..|-...+||..+ |-+...|+.+....+++-
T Consensus 149 ~~g~s~~eIA~~l-gis~~tV~~~l~ra~~~L 179 (184)
T 2q1z_A 149 FGDLTHRELAAET-GLPLGTIKSRIRLALDRL 179 (184)
T ss_dssp HSCCSSCCSTTTC-CCCCHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHH-CcCHHHHHHHHHHHHHHH
Confidence 3467799999999 889999999887766543
No 120
>2k27_A Paired box protein PAX-8; paired domain, solution structure, triple frequency, 3D NMR, induced FIT, alternative splicing, developmental protein; NMR {Homo sapiens}
Probab=34.30 E-value=1.3e+02 Score=22.76 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=42.4
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccc------cCCCCC----CCCCCHHHHHHHHHHHH
Q 045387 14 KGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNY------LRPDIK----RGKFSLEEEEAIIQLHK 83 (242)
Q Consensus 14 kg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~------L~p~lk----kg~WT~EED~~L~~lv~ 83 (242)
....|.|+-..++.++. .|. ....||+.++ .+...+ .||.+. +.+... ....++++.+.|++++.
T Consensus 23 ~~~~s~e~r~~ii~l~~-~G~-s~~~IA~~lg--is~~TV-~rwl~r~~~~G~~~~~~r~gr~~~~~~~~~~~~I~~~~~ 97 (159)
T 2k27_A 23 GRPLPEVVRQRIVDLAH-QGV-RPCDISRQLR--VSHGCV-SKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKR 97 (159)
T ss_dssp SCSSCHHHHHHHHHHHH-HTC-CHHHHHHHHT--CCSHHH-HHHHCCSSTTSCCCCCCCCCCCCCCCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH-cCC-CHHHHHHHHC--cCHHHH-HHHHHHHHhcCCccCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 34689998888888884 563 6789999887 433333 334332 222111 23578888888888876
Q ss_pred Hh
Q 045387 84 VL 85 (242)
Q Consensus 84 ~~ 85 (242)
+.
T Consensus 98 ~~ 99 (159)
T 2k27_A 98 QN 99 (159)
T ss_dssp HC
T ss_pred HC
Confidence 54
No 121
>2jvw_A Uncharacterized protein; solution structure, alpha helical protein, structural GE unknown function, PSI-2, protein structure initiative; NMR {Vibrio fischeri}
Probab=33.00 E-value=8.1 Score=28.32 Aligned_cols=45 Identities=22% Similarity=0.465 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCC-------CCCCCCHHHHHHHH
Q 045387 22 DQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDI-------KRGKFSLEEEEAII 79 (242)
Q Consensus 22 De~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~l-------kkg~WT~EED~~L~ 79 (242)
+..|.++|+.|| |..++..+. ..|.. .+|++ ++.+|-.+..+.|.
T Consensus 18 E~ilt~Lv~~YG---W~~L~~~i~-----I~CF~-----~~PSikSSLKFLRKTpWAR~KVE~lY 69 (88)
T 2jvw_A 18 QKLLTELVEHYG---WEELSYMVN-----INCFK-----KDPSIKSSLKFLRKTDWARERVENIY 69 (88)
T ss_dssp HHHHHHHHHHTC---HHHHHHHTT-----SSSTT-----SSCCHHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC---HHHHHhhcc-----cccCC-----CCCchHHHHHHHhcCHhHHHHHHHHH
Confidence 468999999999 999998776 44443 35554 36788888777665
No 122
>2yqf_A Ankyrin-1; death domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yvi_A
Probab=32.52 E-value=45 Score=24.68 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHH
Q 045387 71 SLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKN 106 (242)
Q Consensus 71 T~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~ 106 (242)
+..-+..|..+....|..|..+|..| |=+..+|..
T Consensus 14 ~~~~~~~~~~ia~~lg~~Wk~LAr~L-g~s~~~I~~ 48 (111)
T 2yqf_A 14 TEQAEMKMAVISEHLGLSWAELAREL-QFSVEDINR 48 (111)
T ss_dssp SHHHHHHHHHHHHHHTTTHHHHHHHT-TCCHHHHHH
T ss_pred HhHHHHHHHHHHHHHhhhHHHHHHHc-CCCHHHHHH
Confidence 66677888888899999999999998 766665543
No 123
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=32.38 E-value=47 Score=25.33 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=28.9
Q ss_pred HHHHHHHHhCC--------cchhhcccC--CCC---CHHHHHHHHHHhhhhH
Q 045387 77 AIIQLHKVLGN--------KWSAIASRL--PGR---TDNEIKNYWNTHIKKK 115 (242)
Q Consensus 77 ~L~~lv~~~G~--------~W~~IA~~l--pgR---T~~q~k~rW~~~l~k~ 115 (242)
+|..+|...|+ .|..||..| +.. ....+|..|..+|.+.
T Consensus 56 ~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~~~~sa~~~Lk~~Y~k~L~~y 107 (128)
T 1c20_A 56 ELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPY 107 (128)
T ss_dssp HHHHHHHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHhcCHHHcCccCcHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 46677777774 699999998 322 2578899999888764
No 124
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=26.90 E-value=57 Score=25.58 Aligned_cols=39 Identities=15% Similarity=0.259 Sum_probs=28.6
Q ss_pred HHHHHHHHhCC--------cchhhcccC--CCC---CHHHHHHHHHHhhhhH
Q 045387 77 AIIQLHKVLGN--------KWSAIASRL--PGR---TDNEIKNYWNTHIKKK 115 (242)
Q Consensus 77 ~L~~lv~~~G~--------~W~~IA~~l--pgR---T~~q~k~rW~~~l~k~ 115 (242)
+|..+|.+.|+ .|.+||..| +.. ....+|..|..+|-+.
T Consensus 68 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~tsa~~~Lk~~Y~k~L~~y 119 (145)
T 2kk0_A 68 MLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPY 119 (145)
T ss_dssp HHHHHHHHHTCHHHHHHHTCHHHHHHHTTCCTTSTTHHHHHHHHHHHHSSHH
T ss_pred HHHHHHHHhCCHHHhcccCcHHHHHHHhCCCCCcCcHHHHHHHHHHHHHHHH
Confidence 36677777774 699999998 332 2568899999888664
No 125
>3ulq_B Transcriptional regulatory protein COMA; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} PDB: 2krf_A
Probab=26.63 E-value=83 Score=22.19 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=35.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 66 KRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 66 kkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
.....|+.|-+.|.-++ .|..-.+||..| |-+...|+.+...++++-
T Consensus 26 ~~~~Lt~rE~~Vl~l~~--~G~s~~eIA~~L-~iS~~TV~~~~~~i~~Kl 72 (90)
T 3ulq_B 26 EQDVLTPRECLILQEVE--KGFTNQEIADAL-HLSKRSIEYSLTSIFNKL 72 (90)
T ss_dssp ---CCCHHHHHHHHHHH--TTCCHHHHHHHH-TCCHHHHHHHHHHHHHHT
T ss_pred cccCCCHHHHHHHHHHH--cCCCHHHHHHHH-CcCHHHHHHHHHHHHHHH
Confidence 34568888877766544 788889999999 889999999887776543
No 126
>1or7_A Sigma-24, RNA polymerase sigma-E factor; regulation, DNA-binding, transmembrane, transcription; 2.00A {Escherichia coli} SCOP: a.4.13.2 a.177.1.1 PDB: 2h27_A
Probab=26.49 E-value=55 Score=25.28 Aligned_cols=29 Identities=10% Similarity=0.056 Sum_probs=23.7
Q ss_pred hCCcchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 85 LGNKWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 85 ~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
.|-...+||..+ |-+...|+.+....+++
T Consensus 155 ~g~s~~EIA~~l-gis~~tV~~~l~ra~~~ 183 (194)
T 1or7_A 155 DGLSYEEIAAIM-DCPVGTVRSRIFRAREA 183 (194)
T ss_dssp TCCCHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 467799999999 89999999988766544
No 127
>1x3u_A Transcriptional regulatory protein FIXJ; helix-turn-helix; NMR {Sinorhizobium meliloti}
Probab=26.05 E-value=81 Score=20.80 Aligned_cols=42 Identities=19% Similarity=0.152 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 70 FSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 70 WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
+|+.|-+.| .++ ..|-.-.+||..+ |-+...|+.+....+++
T Consensus 17 L~~~e~~vl-~l~-~~g~s~~eIA~~l-~is~~tV~~~~~r~~~k 58 (79)
T 1x3u_A 17 LSERERQVL-SAV-VAGLPNKSIAYDL-DISPRTVEVHRANVMAK 58 (79)
T ss_dssp HCHHHHHHH-HHH-TTTCCHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHH-HHH-HcCCCHHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 455555444 444 5677789999999 88999999887766544
No 128
>1tty_A Sigma-A, RNA polymerase sigma factor RPOD; helix-turn-helix, transcription; NMR {Thermotoga maritima} SCOP: a.4.13.2
Probab=25.36 E-value=49 Score=22.92 Aligned_cols=41 Identities=10% Similarity=0.144 Sum_probs=29.2
Q ss_pred HHHHHHHHHHH----hCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 74 EEEAIIQLHKV----LGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 74 ED~~L~~lv~~----~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
.+..++.+... .|-.+.+||..+ |-+...|+.+-...+++-
T Consensus 22 ~er~vl~l~~~l~~~~~~s~~EIA~~l-gis~~tV~~~~~ra~~kL 66 (87)
T 1tty_A 22 REAMVLRMRYGLLDGKPKTLEEVGQYF-NVTRERIRQIEVKALRKL 66 (87)
T ss_dssp HHHHHHHHHHTTTTSSCCCHHHHHHHH-TCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 34444445444 467799999999 999999998877665443
No 129
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=24.98 E-value=18 Score=29.13 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=26.7
Q ss_pred ceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHH
Q 045387 37 WRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAII 79 (242)
Q Consensus 37 W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~ 79 (242)
-..||..+. |+++.+.|..+. +.. -||+||++.+.
T Consensus 126 c~~vA~~ik-gktpeeiR~~f~------I~n-d~t~eEe~~ir 160 (169)
T 3v7d_A 126 CKVVAEMIR-GRSPEEIRRTFN------IVN-DFTPEEEAAIR 160 (169)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHT------CCC-CCCHHHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHcC------CCC-CCCHHHHHHHH
Confidence 367787777 999999998652 333 49999999875
No 130
>2of5_H Leucine-rich repeat and death domain-containing protein; death domain complex, apoptosis; 3.20A {Homo sapiens}
Probab=23.79 E-value=46 Score=25.02 Aligned_cols=31 Identities=26% Similarity=0.544 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhCCcchhhcccCCCCCHHHHHH
Q 045387 75 EEAIIQLHKVLGNKWSAIASRLPGRTDNEIKN 106 (242)
Q Consensus 75 D~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~ 106 (242)
|..|..+....|..|..+|..| |=+..+|..
T Consensus 13 ~~~l~~ia~~lg~dWk~LAr~L-g~s~~~I~~ 43 (118)
T 2of5_H 13 QSNLLSVAGRLGLDWPAVALHL-GVSYREVQR 43 (118)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHT-TCCHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHc-CCCHHHHHH
Confidence 3466677788999999999998 666665533
No 131
>3c57_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 1.70A {Mycobacterium tuberculosis} PDB: 1zlk_A 1zlj_A
Probab=23.50 E-value=85 Score=22.12 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 69 KFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 69 ~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
..|+.|-+.|.- + ..|-.-.+||..+ |-+...|+.+....+++-
T Consensus 27 ~Lt~~e~~vl~l-~-~~g~s~~eIA~~l-~is~~tV~~~l~r~~~kL 70 (95)
T 3c57_A 27 GLTDQERTLLGL-L-SEGLTNKQIADRM-FLAEKTVKNYVSRLLAKL 70 (95)
T ss_dssp CCCHHHHHHHHH-H-HTTCCHHHHHHHH-TCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH-H-HcCCCHHHHHHHH-CcCHHHHHHHHHHHHHHH
Confidence 567776666554 4 6787889999999 889999999887776554
No 132
>1wxp_A THO complex subunit 1; death domain, structural genomics, nuclear matrix, riken structural genomics/proteomics initiative, RSGI, transport protein; NMR {Homo sapiens}
Probab=23.14 E-value=84 Score=23.14 Aligned_cols=31 Identities=32% Similarity=0.551 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhCCcchhhcccCCCCCHHHHHH
Q 045387 75 EEAIIQLHKVLGNKWSAIASRLPGRTDNEIKN 106 (242)
Q Consensus 75 D~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~ 106 (242)
+..|..+....|..|..+|+.| |=+..+|..
T Consensus 18 ~~~~~~ia~~lg~~Wk~LAr~L-g~~~~~I~~ 48 (110)
T 1wxp_A 18 GEQIEVFANKLGEQWKILAPYL-EMKDSEIRQ 48 (110)
T ss_dssp HHHHHHHHHHHTTTHHHHTTTT-TCCHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHh-CCCHHHHHH
Confidence 3445566678899999999998 766666543
No 133
>2o71_A Death domain-containing protein cradd; raidd, apoptosis; 2.00A {Homo sapiens}
Probab=22.74 E-value=62 Score=24.42 Aligned_cols=37 Identities=30% Similarity=0.413 Sum_probs=25.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHH
Q 045387 65 IKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIK 105 (242)
Q Consensus 65 lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k 105 (242)
+....=|.+ .|..++...|..|..+|+.| |=+..+|.
T Consensus 17 ~~~~~~t~~---~l~~Ia~~LG~~Wk~LAR~L-Glse~dId 53 (115)
T 2o71_A 17 ILNSSPSDR---QINQLAQRLGPEWEPMVLSL-GLSQTDIY 53 (115)
T ss_dssp GGGSCCCHH---HHHHHHHHCCTTHHHHHHHT-TCCHHHHH
T ss_pred hccCCCCHH---HHHHHHHHHhhhHHHHHHHc-CCCHHHHH
Confidence 333444554 45556788999999999998 65555543
No 134
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=22.61 E-value=1e+02 Score=19.19 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 75 EEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 75 D~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
+..++.+ -..|-.-.+||..+ |-+...|+.+....+++-
T Consensus 3 e~~vl~l-~~~g~s~~eIA~~l-~is~~tV~~~~~~~~~kl 41 (61)
T 2jpc_A 3 ERQVLKL-IDEGYTNHGISEKL-HISIKTVETHRMNMMRKL 41 (61)
T ss_dssp HHHHHHH-HHTSCCSHHHHHHT-CSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHcCCCHHHHHHHh-CCCHHHHHHHHHHHHHHH
Confidence 3445555 35677789999999 889999999887766543
No 135
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=22.44 E-value=2e+02 Score=26.95 Aligned_cols=59 Identities=17% Similarity=0.382 Sum_probs=37.0
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhCCCCceecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 045387 11 GLKKGPWTAEEDQKLVDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQLHKV 84 (242)
Q Consensus 11 ~~kkg~WT~EEDe~L~~~V~~~G~~~W~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~lv~~ 84 (242)
++-..|||.|+-..|++...+++.+.--- .| ++.---|.+|+ .++++||-+.|.++++.
T Consensus 8 GFYG~PWS~e~R~~l~~f~g~~kmNtYiY----AP--KDDpyhr~~WR---------e~Yp~eel~~l~eLv~~ 66 (447)
T 2xsa_A 8 GFYGRDWRRDERATVMDWIAAAGMNTYIY----GP--KDDVHVRARWR---------VPYDAAGLARLTELRDA 66 (447)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTCCEEEE----CC--TTCTTTTTTTT---------SCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHcCCceEEE----cc--CCChHHHHhhc---------ccCCHHHHHHHHHHHHH
Confidence 45567999999999999999999752221 12 22222334453 35666666666666554
No 136
>1xsv_A Hypothetical UPF0122 protein SAV1236; helix-turn-helix, putative DNA-binding protein, signal recognition particle, unknown function; 1.70A {Staphylococcus aureus subsp} SCOP: a.4.13.3
Probab=22.06 E-value=79 Score=23.30 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 74 EEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 74 ED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
.+..++.++...|-...+||..+ |-+...|+.+....+++
T Consensus 29 ~~r~vl~l~~~~g~s~~EIA~~l-giS~~tV~~~l~ra~~k 68 (113)
T 1xsv_A 29 KQRNYLELFYLEDYSLSEIADTF-NVSRQAVYDNIRRTGDL 68 (113)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 34445556656788899999999 88999998877755433
No 137
>2of5_A Death domain-containing protein cradd; death domain complex, apoptosis; 3.20A {Homo sapiens}
Probab=21.92 E-value=59 Score=24.50 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=25.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHH
Q 045387 64 DIKRGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIK 105 (242)
Q Consensus 64 ~lkkg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k 105 (242)
.+....=|.+ .|..++...|..|..+|+.| |=+..+|.
T Consensus 16 ~~~~~~~t~~---~l~~Ia~~lG~~Wk~LAR~L-Glse~dId 53 (114)
T 2of5_A 16 HILNSSPSDR---QINQLAQRLGPEWEPMVLSL-GLSQTDIY 53 (114)
T ss_dssp CCTTSCCCHH---HHHHHHHTCCSTHHHHHHTT-TCCHHHHH
T ss_pred hhhcCCCCHH---HHHHHHHHHhhhHHHHHHHc-CCCHHHHH
Confidence 3444445555 45556788999999999998 66655553
No 138
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=21.48 E-value=41 Score=21.15 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=24.6
Q ss_pred CCCCCCCCC--CCCCcCCCCHHHHHHHHHHHHHhCC
Q 045387 1 MGRPPSSDK--NGLKKGPWTAEEDQKLVDYIQKHGH 34 (242)
Q Consensus 1 ~gr~~~~~k--~~~kkg~WT~EEDe~L~~~V~~~G~ 34 (242)
+||+....+ ...-.-..|+||-+.|.+.....|.
T Consensus 4 ~~R~k~~~r~r~~~i~vRlt~eE~~~l~~~A~~~g~ 39 (51)
T 2ba3_A 4 AVRKKSEVRQKTVVRTLRFSPVEDETIRKKAEDSGL 39 (51)
T ss_dssp TTBCTTCCCCCSEEEEEEECHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCCcCceeEEEEECHHHHHHHHHHHHHhCC
Confidence 467654422 2234566899999999999999996
No 139
>1k78_A Paired box protein PAX5; paired domain, ETS domain, transcription factor, transcription/DNA complex; 2.25A {Homo sapiens} SCOP: a.4.1.5 a.4.1.5 PDB: 1mdm_A 6pax_A
Probab=21.28 E-value=1.4e+02 Score=22.15 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHH
Q 045387 67 RGKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYW 108 (242)
Q Consensus 67 kg~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW 108 (242)
...+|.|+-..++.++. -|..-.+||+.+ |.+...|....
T Consensus 30 ~~~~s~e~r~~iv~~~~-~G~s~~~iA~~l-gis~~TV~rw~ 69 (149)
T 1k78_A 30 GRPLPDVVRQRIVELAH-QGVRPCDISRQL-RVSHGCVSKIL 69 (149)
T ss_dssp TSCCCHHHHHHHHHHHH-TTCCHHHHHHHH-TCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH-cCCCHHHHHHHH-CcCHHHHHHHH
Confidence 34789999999988884 577788999998 77877776533
No 140
>1fse_A GERE; helix-turn-helix DNA-binding protein transcriptional regulat transcription; 2.05A {Bacillus subtilis} SCOP: a.4.6.2
Probab=21.12 E-value=1.1e+02 Score=19.63 Aligned_cols=45 Identities=20% Similarity=0.162 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhhH
Q 045387 68 GKFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKKK 115 (242)
Q Consensus 68 g~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k~ 115 (242)
..+|+.|-+.|.- + ..|..-.+||..+ |-+...|+.+.....++-
T Consensus 10 ~~L~~~e~~il~~-~-~~g~s~~eIA~~l-~is~~tV~~~~~~~~~kl 54 (74)
T 1fse_A 10 PLLTKREREVFEL-L-VQDKTTKEIASEL-FISEKTVRNHISNAMQKL 54 (74)
T ss_dssp CCCCHHHHHHHHH-H-TTTCCHHHHHHHH-TSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHH-H-HcCCCHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 4577777766654 4 5677889999999 889999998887665443
No 141
>1je8_A Nitrate/nitrite response regulator protein NARL; protein-DNA complex, two-component response regulator, helix-turn-helix, DNA bending; 2.12A {Escherichia coli} SCOP: a.4.6.2 PDB: 1zg1_A 1zg5_A
Probab=21.09 E-value=83 Score=21.52 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=32.4
Q ss_pred CCCHHHHHHHHHHHHHhCCcchhhcccCCCCCHHHHHHHHHHhhhh
Q 045387 69 KFSLEEEEAIIQLHKVLGNKWSAIASRLPGRTDNEIKNYWNTHIKK 114 (242)
Q Consensus 69 ~WT~EED~~L~~lv~~~G~~W~~IA~~lpgRT~~q~k~rW~~~l~k 114 (242)
..|+.|-+.|.- + ..|..-.+||..+ |-+...|+.+....+++
T Consensus 21 ~Lt~~e~~vl~l-~-~~g~s~~eIA~~l-~is~~tV~~~l~r~~~k 63 (82)
T 1je8_A 21 QLTPRERDILKL-I-AQGLPNKMIARRL-DITESTVKVHVKHMLKK 63 (82)
T ss_dssp GSCHHHHHHHHH-H-TTTCCHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH-H-HcCCCHHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 467777665554 4 5677889999999 88999999887766544
No 142
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=20.94 E-value=25 Score=27.67 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=26.2
Q ss_pred eecccccCcccCccccchhcccccCCCCCCCCCCHHHHHHHHH
Q 045387 38 RTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGKFSLEEEEAIIQ 80 (242)
Q Consensus 38 ~~Ia~~l~~~Rt~~qCr~Rw~~~L~p~lkkg~WT~EED~~L~~ 80 (242)
..||..+. |+++.++|..+. +. ..||+||++.+.+
T Consensus 120 ~~va~~i~-gkt~eeir~~f~------I~-~d~t~eEe~~ir~ 154 (159)
T 2ast_A 120 KTVANMIK-GKTPEEIRKTFN------IK-NDFTEEEEAQVRK 154 (159)
T ss_dssp HHHHHHHS-SCCHHHHHHHTT------CC-CCSCTTHHHHHHH
T ss_pred HHHHHHHc-CCCHHHHHHHcC------CC-CCCCHHHHHHHHH
Confidence 46777777 899999999762 22 2599999988763
Done!