BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045388
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDC--KSVLKF 103
SC++C +QM I C FC+ C+ ++V I+ G+ T ++CP C + L+
Sbjct: 19 SCKLCLGEYTVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPKRGHLQE 78
Query: 104 DACKSVLSKNVLELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPYC 162
+ + +++ +++ ++K +E++ +CP C A + G +C C
Sbjct: 79 NEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEKGIQNPQLVQCSAC 138
Query: 163 HRLFCAHCYVPWHPGR--------------EELMMRELVKKKQLRKCPNCKYHIERTGGC 208
FC+ C WHPG+ + L +++CP CK +IER GC
Sbjct: 139 DIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPIKRCPKCKVYIERDEGC 198
Query: 209 LHMTC 213
M C
Sbjct: 199 AQMMC 203
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDC--KSVLKF 103
SC++C +QM I C FC+ C+ ++V I+ G+ T ++CP C + L+
Sbjct: 19 SCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQE 78
Query: 104 DACKSVLSKNVLELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPYC 162
+ + +++ +++ ++K +E++ +CP C A ++ G +C C
Sbjct: 79 NEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVGLQTPQPVQCKAC 138
Query: 163 HRLFCAHCYVPWHPGR--EELMMRELVKKKQ------------LRKCPNCKYHIERTGGC 208
FC+ C WHPG+ E M + + +++CP CK +IER GC
Sbjct: 139 RMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKCKVYIERDEGC 198
Query: 209 LHMTC 213
M C
Sbjct: 199 AQMMC 203
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDC--KSVLKF 103
SC++C +QM I C FC+ C+ ++V I+ G+ T ++CP C + L+
Sbjct: 19 SCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQE 78
Query: 104 DACKSVLSKNVLELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPYC 162
+ + +++ +++ ++K +E++ +CP C A ++ G +C C
Sbjct: 79 NEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDIGLQTPQLVQCKAC 138
Query: 163 HRLFCAHCYVPWHPGR--EELMMRELVKKKQ------------LRKCPNCKYHIERTGGC 208
FC+ C WHPG+ E M + + +++CP C+ +IER GC
Sbjct: 139 DMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKCRVYIERDEGC 198
Query: 209 LHMTC 213
M C
Sbjct: 199 AQMMC 203
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 47 CEICR-ERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDA 105
C+IC E +++++F +E C H +C DCI +H+ I G + ++CP P CK +K
Sbjct: 616 CKICYMEYDQSNEVFTLE-CDHVYCFDCITEHLRILITEGRVLDISCPHPQCKKEIKESE 674
Query: 106 CKSVLS-KNVLELWEKALSQELIDASQGI-YCPFKDCSAKLVYENDGEDVLSESECPYCH 163
+ + KN L+ + ++ L ++ I +CP DC + ++ +L+ CP C
Sbjct: 675 IYMLTNEKNWLKYQKFSMIASL--KTEPIKWCPTPDCDTPVRGGSERNPILN---CPKCS 729
Query: 164 RLFCAHCYVPWHPGRE---ELMMRELVKKKQL------------------RKCPNCKYHI 202
FC C H G + E M + K K + + CP CK HI
Sbjct: 730 NDFCWICGEYSHEGAKCGTEAMELQGRKNKSIESAATAYIDFLESNKHFVKPCPTCKSHI 789
Query: 203 ERTGGCLHMTCL 214
E+ GC HMTC+
Sbjct: 790 EKHDGCNHMTCI 801
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 30 SQMAKSASPS--SPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGII 87
+ A++ +P +P +C++C + D+M ++ C FC+ C+ +++ I+ G
Sbjct: 11 AMTAENPTPGDLAPAPLITCKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCG 70
Query: 88 TPVTCPGPDC--KSVLKFDACKSVLSKNVLELWEK-ALSQELIDASQGIYCPFKDCSA-- 142
+P+TCP C L+ ++ + +L+++ +E+ +CP DC
Sbjct: 71 SPITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVC 130
Query: 143 KLVYENDGEDVLSESECPYCHRLFCAHCYVPWHP------------GREELMMRELVKKK 190
+ + G+ VL ECP CH FC+ C WH E + +
Sbjct: 131 PVASSDPGQPVL--VECPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAEA 188
Query: 191 QLRKCPNCKYHIERTGGCLHMTC 213
+++CP C+ +IER GC M C
Sbjct: 189 PIKQCPVCRVYIERNEGCAQMMC 211
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 21 EALMASTITSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVAT 80
+ L T+T++ S P +C++C + D+M ++ C FC+ C+ +++
Sbjct: 5 DGLQCLTMTAENPPSGD-LIPAPLVTCKLCLCEQSLDKMTMLQECQCIFCTPCLKQYMVL 63
Query: 81 KIQGGIITPVTCPGPDC--KSVLKFDACKSVLSKNVLELWEK-ALSQELIDASQGIYCPF 137
I+ G +P+TCP C L+ ++ + +L+++ +E+ +CP
Sbjct: 64 SIREGCGSPITCPDMVCLNHGTLQETEIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPV 123
Query: 138 KDCSA--KLVYENDGEDVLSESECPYCHRLFCAHCYVPWH------------PGREELMM 183
DC + + G+ VL ECP CH FC+ C WH P L
Sbjct: 124 ADCQTVCHISAGDPGQPVL--VECPSCHLKFCSCCKDAWHEESSCRDSQSAMPEHGALFG 181
Query: 184 RELVKKKQLRKCPNCKYHIERTGGCLHMTC 213
+ +++CP C+ +IER GC M C
Sbjct: 182 TD--ADAPIKQCPVCRIYIERNEGCAQMMC 209
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDC--KSVLKF 103
+C++C + D+M ++ C FC+ C+ +++ I+ G +P+TCP C L+
Sbjct: 30 TCKLCLCEQSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQE 89
Query: 104 DACKSVLSKNVLELWEK-ALSQELIDASQGIYCPFKDCSA--KLVYENDGEDVLSESECP 160
++ + +L+++ +E+ +CP DC + + G+ VL ECP
Sbjct: 90 AEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVL--VECP 147
Query: 161 YCHRLFCAHCYVPWH---------PG---REELMMRELVKKKQLRKCPNCKYHIERTGGC 208
CH FC+ C WH PG E + +++CP C+ +IER GC
Sbjct: 148 SCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTETDAPIKQCPVCRVYIERNEGC 207
Query: 209 LHMTC 213
M C
Sbjct: 208 AQMMC 212
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 13 LAEELEIQEALMASTITSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSD 72
LA E L+ + S + P +P C +C E + + + C + C +
Sbjct: 202 LAPEPFSVPGLLGAPPYSGLGGVGDPYAPLMVLMCRVCLE---DKPIKPLPCCKKAVCEE 258
Query: 73 CINKHVATKIQGGIITPVTCPGPDCKSVLKFDACKSVLSKNVLELWEKALSQELIDASQG 132
C+ ++++++Q G + + CP +C L+ L+ ++ L ID+S
Sbjct: 259 CLKIYLSSQVQLGQVE-IKCPVTECFEFLEETTVVYNLTHEDSIKYKYFLELGRIDSSTK 317
Query: 133 IYCPFKDCSAKLVYENDGE---DVLSES----ECPYCHRLFCAHCYVPWHPG-------R 178
P C ++ G SES +CP C ++C C+ PWH G +
Sbjct: 318 ---PCPQCKHFTTFKKKGHIPTPSRSESRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKK 374
Query: 179 EELMMRELVK-----KKQLRKCPNCKYHIERTGGCLHMTC 213
+ ++R ++ +KCP CK HI+RT GC HMTC
Sbjct: 375 GDKLLRHWASEIEHGQRNAQKCPKCKIHIQRTEGCDHMTC 414
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 28 ITSQMAKSASPSSPPSRSS-CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGI 86
+ S K+ + ++P RS C +C + D+ + + +C HSFC DC + T+I GI
Sbjct: 133 LGSSGYKTTASATPQYRSQMCPVCASSQLGDKFYSL-ACGHSFCKDCWTIYFETQIFQGI 191
Query: 87 ITPVTCPGPDCKSVLKFDACKSVLSKNVL-ELWEKALSQELIDASQGI-YCPFKDCSAKL 144
T + C C + D +++++ V+ + +++ ++ + + + +CP +C
Sbjct: 192 STQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQ--- 248
Query: 145 VYENDGEDVLSESECPYCHRLFCAHCYVPWH-PGREELMMRELVK-----------KKQL 192
+ E + C CH FC C + +H P +++ + L K
Sbjct: 249 IIVQSSEISAKRAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYISAHT 308
Query: 193 RKCPNCKYHIERTGGCLHMTCL 214
+ CP C IE+ GGC HM C
Sbjct: 309 KDCPKCHICIEKNGGCNHMQCF 330
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDAC 106
C IC E D + +E C H FC C+ + ++ P+ C DC + +
Sbjct: 1561 CPICLS--EVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADM 1618
Query: 107 KSVLSKNVLELWEKALSQELIDASQGI--YCPFKDCSAKLVYENDGEDVLSESE-CPYCH 163
+++LS+ L+ A + +S G +C DC + +Y G E C CH
Sbjct: 1619 RALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPS--IYRVAGPQESGEPFICGACH 1676
Query: 164 RLFCAHCYVPWHP-----------GREELMMRELVKKKQLRKCPNCKYHIERTGGCLHMT 212
C C++ +HP +L +++ K K +++CP CK IE+T GC H+
Sbjct: 1677 SETCTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGKDVKECPICKSTIEKTDGCNHLQ 1736
Query: 213 C 213
C
Sbjct: 1737 C 1737
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDC--KSVLKF 103
SC++C +QM I C FC+ C+ ++V I+ G T ++CP C + L+
Sbjct: 19 SCKLCLGEFPLEQMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPKRGHLQE 78
Query: 104 DACKSVLSKNVLELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPYC 162
+ + +++ +++ + K +E++ +CP C A + + C C
Sbjct: 79 NEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQAVCQLKESDTVLPQLVRCSVC 138
Query: 163 HRLFCAHCYVPWH---------------PGREELMMRELVKKKQLRKCPNCKYHIERTGG 207
FC+ C WH PG + +++CP CK +IER G
Sbjct: 139 TLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIKRCPKCKVYIERDEG 198
Query: 208 CLHMTC 213
C M C
Sbjct: 199 CAQMMC 204
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 31/203 (15%)
Query: 35 SASPSSPP--SRSS-----CEICRERRENDQMFKIESCIHSFCSDCINKHVATKI-QGGI 86
S P + P +RSS C+IC N +E C H FC C ++ TKI + G+
Sbjct: 143 SKKPKTRPMSTRSSSQDLPCQICYLNYPNSYFTGLE-CGHKFCMQCWGDYLTTKIIEEGM 201
Query: 87 ITPVTCPGPDCKSVLKFDACKSVLSKNVLEL-WEKALSQELIDASQGI-YCPFKDCS--A 142
++CP +C ++ + +++ + ++L ++ ++ ++ ++ + +CP DC
Sbjct: 202 GQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVV 261
Query: 143 KLVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK------------K 190
K+ Y D + V + C R FC +C WH + +R+ +KK
Sbjct: 262 KVQYP-DAKPVRCK-----CGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAA 315
Query: 191 QLRKCPNCKYHIERTGGCLHMTC 213
++CP C IE+ GGC HM C
Sbjct: 316 NTKECPKCHVTIEKDGGCNHMVC 338
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 29 TSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKI-QGGII 87
T QM +S P C+IC N +E C H FC C +++ TKI + G+
Sbjct: 144 TRQMNTRSSALDMP----CQICYLNYPNSYFTGLE-CGHKFCMQCWGEYLTTKIIEEGMG 198
Query: 88 TPVTCPGPDCKSVLKFDACKSVLSKNVLEL-WEKALSQELIDASQGI-YCPFKDCS--AK 143
++CP C ++ + +++ + ++L ++ ++ ++ ++ + +CP DC K
Sbjct: 199 QTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVK 258
Query: 144 LVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK------------KQ 191
+ Y D + V + C R FC +C WH + +R+ +KK
Sbjct: 259 VQYP-DAKPVHCK-----CGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAAN 312
Query: 192 LRKCPNCKYHIERTGGCLHMTC 213
++CP C IE+ GGC HM C
Sbjct: 313 TKECPKCHVTIEKDGGCNHMVC 334
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 29 TSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKI-QGGII 87
T QM +S P C+IC N +E C H FC C ++++ TKI + G+
Sbjct: 144 TRQMNTRSSAQDMP----CQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIIEEGMG 198
Query: 88 TPVTCPGPDCKSVLKFDACKSVLSKNVLEL-WEKALSQELIDASQGI-YCPFKDCS--AK 143
++CP C ++ + +++ + ++L ++ ++ ++ ++ + +CP DC K
Sbjct: 199 QTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVK 258
Query: 144 LVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK------------KQ 191
+ Y D + V + C R FC +C WH + +++ +KK
Sbjct: 259 VQYP-DAKPVRCK-----CGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAAN 312
Query: 192 LRKCPNCKYHIERTGGCLHMTC 213
++CP C IE+ GGC HM C
Sbjct: 313 TKECPKCHVTIEKDGGCNHMVC 334
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 29 TSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKI-QGGII 87
T QM +S P C+IC N +E C H FC C ++++ TKI + G+
Sbjct: 170 TRQMNTRSSAQDMP----CQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIMEEGMG 224
Query: 88 TPVTCPGPDCKSVLKFDACKSVLSKNVLEL-WEKALSQELIDASQGI-YCPFKDCS--AK 143
++CP C ++ + +++ + ++L ++ ++ ++ ++ + +CP DC K
Sbjct: 225 QTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVK 284
Query: 144 LVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK------------KQ 191
+ Y D + V + C R FC +C WH + +++ +KK
Sbjct: 285 VQYP-DAKPVRCK-----CGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAAN 338
Query: 192 LRKCPNCKYHIERTGGCLHMTC 213
++CP C IE+ GGC HM C
Sbjct: 339 TKECPKCHVTIEKDGGCNHMVC 360
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 29 TSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKI-QGGII 87
T QM +S P C+IC N +E C H FC C ++++ TKI + G+
Sbjct: 172 TRQMNTRSSAQDMP----CQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIMEEGMG 226
Query: 88 TPVTCPGPDCKSVLKFDACKSVLSKNVLEL-WEKALSQELIDASQGI-YCPFKDCS--AK 143
++CP C ++ + +++ + ++L ++ ++ ++ ++ + +CP DC K
Sbjct: 227 QTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVK 286
Query: 144 LVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK------------KQ 191
+ Y D + V + C R FC +C WH + +++ +KK
Sbjct: 287 VQYP-DAKPVRCK-----CGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAAN 340
Query: 192 LRKCPNCKYHIERTGGCLHMTC 213
++CP C IE+ GGC HM C
Sbjct: 341 TKECPKCHVTIEKDGGCNHMVC 362
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 29 TSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKI-QGGII 87
T QM +S P C+IC N +E C H FC C ++++ TKI + G+
Sbjct: 170 TRQMNTRSSAQDMP----CQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIMEEGMG 224
Query: 88 TPVTCPGPDCKSVLKFDACKSVLSKNVLEL-WEKALSQELIDASQGI-YCPFKDCS--AK 143
++CP C ++ + +++ + ++L ++ ++ ++ ++ + +CP DC K
Sbjct: 225 QTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVK 284
Query: 144 LVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK------------KQ 191
+ Y D + V + C R FC +C WH + +++ +KK
Sbjct: 285 VQYP-DAKPVRCK-----CGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAAN 338
Query: 192 LRKCPNCKYHIERTGGCLHMTC 213
++CP C IE+ GGC HM C
Sbjct: 339 TKECPKCHVTIEKDGGCNHMVC 360
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDC--KSVLKF 103
SC++C +QM I C FCS C+ ++V I+ G+ T ++CP C + L
Sbjct: 19 SCKLCLGEFPLEQMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACPKQGHLLE 78
Query: 104 DACKSVLSKNVLELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSES-ECPY 161
+ + +++ V++ +++ +E++ +CP C A + N+ E L + +CP
Sbjct: 79 NEIECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQA-VCQLNEAEVQLPQPVQCPE 137
Query: 162 CHRLFCAHCYVPWH---------------PGREELMMRELVKKKQLRKCPNCKYHIERTG 206
C FC+ C H PG ++ + +++CP CK +IER
Sbjct: 138 CSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCPKCKVYIERDE 197
Query: 207 GCLHMTC 213
GC M C
Sbjct: 198 GCAQMMC 204
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 25/209 (11%)
Query: 24 MASTITSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQ 83
+ + + + M +A+ SC IC E Q F + C H +C C ++ K+
Sbjct: 116 IDAGVPNVMKLNATIVEKSGNVSCLICLEDYPPTQTFAL-ICNHRYCLPCYKNYLEIKVS 174
Query: 84 GG---IITPVTCPGPDCKSVLKFDACKSVLSKNVLELWEKALSQELIDAS-QGIYCPFKD 139
G I TP CP P CK ++ DA K ++S V E + + + +D + Q +CP
Sbjct: 175 EGPECIYTP--CPAPKCKVIVHQDAFKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPG 232
Query: 140 CSAKLVYENDGEDVLSESECPYCHRLFCAHC-------YVP--------WHPGREELMMR 184
C + D ++ C C +C +C ++P W +
Sbjct: 233 CIYSI--RCDRKERKEAVNCK-CGFQYCFNCNDYEIGDHMPCPCSQVDKWLQKASDESEN 289
Query: 185 ELVKKKQLRKCPNCKYHIERTGGCLHMTC 213
+KCP C+ IE+ GGC+HMTC
Sbjct: 290 VTWMLANTKKCPECRSPIEKNGGCMHMTC 318
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 28/202 (13%)
Query: 29 TSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKI-QGGII 87
T M +S P C+IC N +E C H FC C ++ TKI + G+
Sbjct: 142 TRLMNTRSSAQDMP----CQICYLNYPNSYFTGLE-CGHKFCMQCWGDYLTTKIIEEGMG 196
Query: 88 TPVTCPGPDCKSVLKFDACKSVLSKNVLEL-WEKALSQELIDASQGI-YCPFKDCS--AK 143
++CP C ++ + +++ + ++L ++ ++ ++ ++ + +CP DC K
Sbjct: 197 QTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVK 256
Query: 144 LVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK------------KQ 191
+ Y D + V + C R FC +C WH + +R+ +KK
Sbjct: 257 VQYP-DAKPVRCK-----CGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAAN 310
Query: 192 LRKCPNCKYHIERTGGCLHMTC 213
++CP C IE+ GGC HM C
Sbjct: 311 TKECPKCHVTIEKDGGCNHMVC 332
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDA 105
SC +C E R + + C C +C+ +++++++Q G + CP +C L
Sbjct: 2 SCRVCLEDRS---IKPLPCCKKPVCDECLKRYLSSQVQLGQ-AEIQCPITECNKHLDEST 57
Query: 106 CKSVLSKNVLELWEKALSQELIDASQGIYCP----FKDCSAKLVYEN--DGEDVLSESEC 159
L + + ++ L +D+S CP F K N E+ L + +C
Sbjct: 58 ILYSLPHDDIIKYKYFLELSRMDSSTKP-CPQCKHFTTFKRKTHIPNPTKSENKL-KIQC 115
Query: 160 PYCHRLFCAHCYVPWHPG---REELMMRELVK---------KKQLRKCPNCKYHIERTGG 207
P C ++C C+ PWH G RE +L++ ++ +KCP CK HI+RT G
Sbjct: 116 PSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHGQRNAQKCPRCKVHIQRTEG 175
Query: 208 CLHMTC 213
C HMTC
Sbjct: 176 CDHMTC 181
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 21 EALMASTITSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVAT 80
+ L+ + + +K S PP C +C + + + + +C H FC C +H +
Sbjct: 115 QLLVEARVQPNPSKHVPTSHPPHH--CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSV 171
Query: 81 KIQGGIITPVTCPGPDCKSVLKFDACKSVL-SKNVLELWEKALSQELIDASQGI-YCPFK 138
++ G+ V+C DC D +L ++ + E + + L ++ +++ + CP
Sbjct: 172 LVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGA 231
Query: 139 DCSAKLVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK--------- 189
DC + + E +C C+ +FC C +H + +R+ + K
Sbjct: 232 DCPMVIRVQ---EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETAN 288
Query: 190 ---KQLRKCPNCKYHIERTGGCLHMTC 213
+ CP C IE+ GGC HM C
Sbjct: 289 YISAHTKDCPKCNICIEKNGGCNHMQC 315
>sp|Q949V6|ARI1_ARATH Probable E3 ubiquitin-protein ligase ARI1 OS=Arabidopsis thaliana
GN=ARI1 PE=2 SV=1
Length = 597
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 25 ASTITSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQG 84
+ Q S+ P S S+ SC++C E D M +++ C H FC++C +H +I
Sbjct: 103 VTVFDYQYGNSSFPQS--SQMSCDVCMEDLPGDHMTRMD-CGHCFCNNCWTEHFTVQINE 159
Query: 85 GIITPVTCPGPDCKSVLKFDACKSVLSKNVLEL---WEKALSQELIDASQGI-YCPFKDC 140
G + C C ++ D +S++SK +L +++ L + I+ ++ + +CP
Sbjct: 160 GQSKRIRCMAHQCNAICDEDIVRSLVSKKRPDLAAKFDRYLLESYIEDNRMVKWCPSTPH 219
Query: 141 SAKLVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKKK---------- 190
+ D D L E EC C FC C H LM EL +KK
Sbjct: 220 CGNAIRAED--DKLCEVECS-CGLQFCFSCLCQAHSPCSCLMW-ELWRKKCRDESETINW 275
Query: 191 ---QLRKCPNCKYHIERTGGCLHMTCL 214
+ CP C +E+ GGC + C+
Sbjct: 276 ITVHTKLCPKCYKPVEKNGGCNLVRCI 302
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGG-IITPVTCPGPDCKSVLKFDA 105
C IC E +++ ++ SC H +C C ++ TKI+ G V CP P C + + D
Sbjct: 128 CGICFESYTREEIARV-SCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDM 186
Query: 106 CKSVLSKNVLELWEKALSQELIDASQGI-YCPFKDCSAKLVYENDGEDVLSESECPYCHR 164
+ V V E + + + + ++ + I +CP C + E G + S C
Sbjct: 187 IEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAV--EFGGSESSSYDVSCLCSY 244
Query: 165 LFCAHCYVPWHPGREELMMRELVKKKQ------------LRKCPNCKYHIERTGGCLHMT 212
FC +C H + + + + K Q + CP CK IE+ GC HMT
Sbjct: 245 RFCWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANSKPCPECKRPIEKNDGCNHMT 304
Query: 213 C 213
C
Sbjct: 305 C 305
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 38 PSSPPSRSS--CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGP 95
PS S+ + C++C E + C H FC+DC H KI G + C
Sbjct: 110 PSLVTSKKTMKCDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAH 169
Query: 96 DCKSVLKFDACKSVLSKNVLELWEKALSQELIDASQGI-YCPFK-DCSAKLVYENDGEDV 153
+CK++ D + ++S + + +++ L + ++ + + +CP K C + + DG DV
Sbjct: 170 ECKAICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDV 229
Query: 154 LSESECPYCHRLFCAHCYVPWHPGREELMMRELVKKK-------------QLRKCPNCKY 200
+ E C C FC C H LM + L KKK + CP C
Sbjct: 230 V-EVGCS-CGLQFCFSCLSESHSPCSCLMWK-LWKKKCEDESETVNWITVNTKLCPKCSK 286
Query: 201 HIERTGGCLHMTC 213
I++ GC MTC
Sbjct: 287 PIQKRDGCNLMTC 299
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 21 EALMASTITSQMAKSASPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVAT 80
+ L+ + + +K + PP C +C + + + + +C H FC C +H +
Sbjct: 114 QLLVEARVQPNPSKHVPTAHPPHH--CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSV 170
Query: 81 KIQGGIITPVTCPGPDCKSVLKFDACKSVL-SKNVLELWEKALSQELIDAS-QGIYCPFK 138
++ G+ ++C DC D +L ++ + + + + L ++ +++ Q CP
Sbjct: 171 LVKDGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGA 230
Query: 139 DCSAKLVYENDGEDVLSESECPYCHRLFCAHCYVPWHPGREELMMRELVKK--------- 189
DC + + E +C C +FC C +H + +R+ + K
Sbjct: 231 DCPMVIRVQ---EPRARRVQCNRCSEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETAN 287
Query: 190 ---KQLRKCPNCKYHIERTGGCLHMTC 213
+ CP C IE+ GGC HM C
Sbjct: 288 YISAHTKDCPKCNICIEKNGGCNHMQC 314
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGG-IITPVTCPGPDCKSVLKFDA 105
C IC E ++ ++ SC H +C C ++ TKI+ G V CP P C +V+ D
Sbjct: 139 CGICFESYTRKEIARV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 197
Query: 106 CKSVLSKNVLELWEKALSQELI-DASQGIYCPFKDCSAKLVYENDGEDVLSESECPYCHR 164
V K + + + + + D + +CP C + + +G S C C
Sbjct: 198 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAVEFGVNGSSSYDVS-C-LCSY 255
Query: 165 LFCAHCYVPWH-PGREELMMRELVKKK-----------QLRKCPNCKYHIERTGGCLHMT 212
FC +C H P E + + L+K K + + CP CK IE+ GC HM+
Sbjct: 256 KFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILAKTKPCPKCKRPIEKNTGCNHMS 315
Query: 213 C 213
C
Sbjct: 316 C 316
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 45 SSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFD 104
+CEIC + E F C H FC C +++ ++I G + + CP C ++
Sbjct: 129 GTCEICYD--EGCLPFFSAECDHEFCLACYRQYLDSRISEGE-SVIQCPEESCTQIVSIQ 185
Query: 105 ACKSVLSKNVLELWEKALSQELIDASQGI-YCPFKDCSAKL---VYENDGEDVLSESECP 160
+ VL + L+ + + L + +D + + +CP DC + V + V+ C
Sbjct: 186 SITKVLDEKSLDRYHRLLDRSFVDDNDHLRWCPAPDCEFAIECHVTQASLSSVVPTVTCN 245
Query: 161 YCHRLFCAHCYVPWHPGREELMMRELVKKKQ------------LRKCPNCKYHIERTGGC 208
C + FC C H +++ ++K Q ++CP C IE+ GGC
Sbjct: 246 -CGKQFCFGCGHDNHQPTICPLVKIWLQKCQDDSETANWIHANTKECPKCSTTIEKNGGC 304
Query: 209 LHMTC 213
HMTC
Sbjct: 305 NHMTC 309
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 38/191 (19%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQG-GIITPVTCPGPDCKSVLK-FD 104
CEIC + D M +E C H FC C +++++TKI G+ ++C C ++
Sbjct: 133 CEICFSQLPPDSMAGLE-CGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDVT 191
Query: 105 ACKSVLSKNVLELWEKALSQELIDASQGI-YCPFKDCSAKLVYENDGEDVLSESECPY-- 161
V V +++ ++ ++ +Q + +CP DC+ + + PY
Sbjct: 192 VANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTYAV-------------KVPYAE 238
Query: 162 -------CHRLFCAHCYVPWHPGREELMMRELVKK------------KQLRKCPNCKYHI 202
C +FC C WH + +++ +KK ++CP C I
Sbjct: 239 PRRVHCKCGHVFCFACGENWHDPVKCRWLKKWIKKCDDDSETSNWIAANTKECPRCSVTI 298
Query: 203 ERTGGCLHMTC 213
E+ GGC HM C
Sbjct: 299 EKDGGCNHMVC 309
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 20/192 (10%)
Query: 37 SPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPD 96
PS C+IC E + C H FC+DC +H +I G + C
Sbjct: 109 DPSLTKKTMKCDICMEEDLSKYAMTRMECGHRFCNDCWKEHFTVRINEGEGKRIRCMAYK 168
Query: 97 CKSVLKFDACKSVLSKNVLELWEKALSQELIDASQGI-YCPFK-DCSAKLVYENDGEDVL 154
C ++ D + ++S + E +++ L + ++ + + +CP C + D DV
Sbjct: 169 CNTIC--DEARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDV- 225
Query: 155 SESECPYCHRLFCAHCYVPWHPGREELMMRELVKKK-------------QLRKCPNCKYH 201
E EC C FC C H LM + L KKK + CP C
Sbjct: 226 DEVECS-CGLQFCFSCLSESHSPCSCLMWK-LWKKKCEDESETVNWMTVNTKLCPKCSKP 283
Query: 202 IERTGGCLHMTC 213
I++ GC HMTC
Sbjct: 284 IQKRDGCNHMTC 295
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGG-IITPVTCPGPDCKSVLKFDA 105
C IC E ++ + SC H +C C ++ TKI+ G V CP P C +V+ D
Sbjct: 121 CGICFESYTRKEIASV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 179
Query: 106 CKSVLSKNVLELWEKALSQELI-DASQGIYCPFKDCSAKLVY-ENDGEDVLSESECPYCH 163
V K + + + + + D + +CP C + + E+ G DV C
Sbjct: 180 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVAC-----LCS 234
Query: 164 RLFCAHCYVPWH-PGREELMMRELVKKK-----------QLRKCPNCKYHIERTGGCLHM 211
FC +C H P E + + + K + + CP CK IE++ GC HM
Sbjct: 235 YRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANSKPCPKCKRPIEKSHGCNHM 294
Query: 212 TC 213
TC
Sbjct: 295 TC 296
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 47 CEICR-ERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDA 105
C IC E+ +D M+ +E C H +C C+ + +I+ G + + CP P C SV
Sbjct: 221 CSICFCEKLGSDCMYFLE-CKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQ 279
Query: 106 CKSVLSKNVLELWEKALSQELID-ASQGIYCPFKDCSAKLVYENDGEDVLSESECPYCHR 164
K ++ ++ +++ L Q +D + +YCP C ++ E G + C C+
Sbjct: 280 VKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAI----CSSCNF 335
Query: 165 LFCAHCYVPWH 175
FC C + +H
Sbjct: 336 AFCTLCRLTYH 346
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 39 SSPPSRS-SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGII-TPVTCPGPD 96
++P R +C IC + +++ + SC H FC+ C +++T I G + CP P
Sbjct: 123 TTPDGREFTCGICFDSYTLEEIVSV-SCGHPFCATCWTGYISTTINDGPGCLMLKCPDPS 181
Query: 97 CKSVLKFDACKSVLSKNVLELWEKALSQELIDASQGI-YCPFKDCSAKLVYENDGEDVLS 155
C + + D + SK E + + + ++ ++ + +CP C + + E
Sbjct: 182 CPAAIGRDMIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESY-- 239
Query: 156 ESECPYCHRLFCAHCYVPWH-PGREELMMRELVKKK-----------QLRKCPNCKYHIE 203
+ C C FC +C H P + + + ++K + CP CK IE
Sbjct: 240 DVSC-LCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANSKPCPKCKRPIE 298
Query: 204 RTGGCLHMTC 213
+ GC+HMTC
Sbjct: 299 KNHGCMHMTC 308
>sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana
GN=ARI7 PE=2 SV=1
Length = 562
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 18/190 (9%)
Query: 38 PSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGG-IITPVTCPGPD 96
P S S +C IC + +++ + SC H FC+ C +++T I G + CP P
Sbjct: 128 PPSDDSELTCGICFDSYPPEKIASV-SCGHPFCTTCWTGYISTTINDGPGCLMLRCPDPS 186
Query: 97 CKSVLKFDACKSVLSKNVLELWEKALSQELIDASQGI-YCPFKDC--SAKLVYENDGEDV 153
C + + D + S++ E + + + I+ ++ + +CP C + V + DV
Sbjct: 187 CLAAVGHDMVDKLASEDEKEKYNRYFLRSYIEDNRKMKWCPAPGCDFAIDFVAGSGNYDV 246
Query: 154 L---SESECPYC----HRLFCAHCYVPW---HPGREELMMRELVKKKQLRKCPNCKYHIE 203
S S C C HR W + E M L K CP CK IE
Sbjct: 247 SCLCSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANSK---PCPRCKRPIE 303
Query: 204 RTGGCLHMTC 213
+ GC+HMTC
Sbjct: 304 KNQGCMHMTC 313
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPG---PDCKSVLKF 103
C +C +++M + SC + C DC +H ++ IT + CP PD +
Sbjct: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
Query: 104 DACKSVLSKNVLE--------LWEKALSQE-LIDASQGIYCPFKDCSAKLVYENDGEDVL 154
+ S L + E L+ K L++ L+ + ++C CS +YE +
Sbjct: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWC--AQCSFGFIYEREQ---- 812
Query: 155 SESECPYCHRLFCAHCYVPW---HPGR--EELMMRELVKKKQLR-------------KCP 196
E+ CP CH+ FC C W H GR E+ + + + + CP
Sbjct: 813 LEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCP 872
Query: 197 NCK--YHIERTGGCLHMTC 213
CK Y + R GGC+H C
Sbjct: 873 KCKFSYALAR-GGCMHFHC 890
>sp|Q84RR2|ARI2_ARATH Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana
GN=ARI2 PE=2 SV=1
Length = 593
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 49 ICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDACKS 108
IC E Q+ +++ C HSFC++C H KI G + C C ++ D ++
Sbjct: 126 ICVEDVPGYQLTRMD-CGHSFCNNCWTGHFTVKINEGQSKRIICMAHKCNAICDEDVVRA 184
Query: 109 VLSK---NVLELWEKALSQELIDASQGI-YCPFK-DCSAKLVYENDGEDVLSESECPYCH 163
++SK ++ E +++ L + I+ ++ + +CP C + E+D L E EC C
Sbjct: 185 LVSKSQPDLAEKFDRFLLESYIEDNKMVKWCPSTPHCGNAIRVEDDE---LCEVECS-CG 240
Query: 164 RLFCAHCYVPWHPGREELMMRELVKKK-------------QLRKCPNCKYHIERTGGCLH 210
FC C H +M EL +KK + CP C +E+ GGC
Sbjct: 241 LQFCFSCSSQAHSPC-SCVMWELWRKKCFDESETVNWITVHTKPCPKCHKPVEKNGGCNL 299
Query: 211 MTCL 214
+TCL
Sbjct: 300 VTCL 303
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 12/68 (17%)
Query: 158 ECPYCHRLFCAHCYVPWHPG-------REELMMRELVK-----KKQLRKCPNCKYHIERT 205
+CP C ++C C+ PWH G + + ++R ++ +KCP CK HI+RT
Sbjct: 82 QCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQRNAQKCPKCKIHIQRT 141
Query: 206 GGCLHMTC 213
GC HMTC
Sbjct: 142 EGCDHMTC 149
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 37/198 (18%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPG---PDCKSVLKF 103
C +C ++M + SC + C +C +H ++ IT + CP PD +
Sbjct: 693 CAVCGWALPRNRMQALISCECTICPECFRQHFTIALKEKHITDMVCPACGRPDLTDDAQL 752
Query: 104 DACKSVLSKNVLE--------LWEKALSQE-LIDASQGIYCPFKDCSAKLVYENDGEDVL 154
+ S L + E L+ K L++ L+ + ++C CS +YE +
Sbjct: 753 LSYFSTLDIQLRESLDPDAYALFHKKLTEAVLMRDPKFLWC--AQCSFGFIYEREQ---- 806
Query: 155 SESECPYCHRLFCAHCYVPW---HPGR--EELMMRELVKKKQLR-------------KCP 196
E+ CP CH+ FC C W H GR E+ + + + CP
Sbjct: 807 LEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCP 866
Query: 197 NCKY-HIERTGGCLHMTC 213
CK+ + GGC+H C
Sbjct: 867 KCKFSYALARGGCMHFHC 884
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 43/200 (21%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDAC 106
C +C R D+ +I +C H C DC+ +++ +I + ++C P+C
Sbjct: 132 CPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVN-ISC--PECTERFNPHDI 188
Query: 107 KSVLSKNVL-ELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPY--- 161
+ +LS +VL E +E+ L + L+ +CP DC ++ + CP
Sbjct: 189 RLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVI-------AFGCASCPKLTC 241
Query: 162 ----CHRLFCAHCYVPWHPGR----------EELMMREL------------VKKKQLRKC 195
C FC HC WHP + + L +R + ++ C
Sbjct: 242 GREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPC 301
Query: 196 PNCKYHIERT--GGCLHMTC 213
P C +I + G C HMTC
Sbjct: 302 PRCAAYIIKMNDGSCNHMTC 321
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 17/191 (8%)
Query: 37 SPSSPPSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGG-IITPVTCPGP 95
P+ +C IC E ++ + SC H FC+ C +++T I G + CP P
Sbjct: 123 GPAPDGREFTCGICFESYPLEETISV-SCGHPFCATCWTGYISTSINDGPGCLMLKCPYP 181
Query: 96 DCKSVLKFDACKSVLSKNVLELWEKALSQELIDASQGIYC-PFKDCSAKLVYENDGEDVL 154
C + + D ++ SK E + + + ++ ++ + C P C + + G +
Sbjct: 182 CCPAAIGRDMIDNLCSKEDKERYYRYFLRSYVEVNREMKCCPAPGCEHAISFAA-GTESN 240
Query: 155 SESECPYCHRLFCAHCYVPWH-PGREELMMRELVKKK-----------QLRKCPNCKYHI 202
+ C C FC +C H P + + + ++K + CP CK I
Sbjct: 241 YDVSC-LCSHSFCWNCSEEAHRPVDCDTVGKWILKNSTESENMNWILANSKPCPKCKRPI 299
Query: 203 ERTGGCLHMTC 213
E+ GC+HMTC
Sbjct: 300 EKNHGCMHMTC 310
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 43/200 (21%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDAC 106
C +C R D+ I +C H C DC+ +++ +I + ++C P+C
Sbjct: 132 CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVN-ISC--PECTERFNPHDI 188
Query: 107 KSVLSKNVL-ELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPY--- 161
+ +LS +VL E +E+ L + L+ +CP DC ++ + CP
Sbjct: 189 RLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVI-------AFGCASCPKLTC 241
Query: 162 ----CHRLFCAHCYVPWHPGR----------EELMMREL------------VKKKQLRKC 195
C FC HC WHP + + L +R + ++ C
Sbjct: 242 GREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPC 301
Query: 196 PNCKYHIERT--GGCLHMTC 213
P C +I + G C HMTC
Sbjct: 302 PRCAAYIIKMNDGSCNHMTC 321
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 43/200 (21%)
Query: 47 CEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDAC 106
C +C R D+ I +C H C DC+ +++ +I + ++C P+C
Sbjct: 132 CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVN-ISC--PECTERFNPHDI 188
Query: 107 KSVLSKNVL-ELWEK-ALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPY--- 161
+ +LS +VL E +E+ L + L+ +CP DC ++ + CP
Sbjct: 189 RLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVI-------AFGCASCPKLTC 241
Query: 162 ----CHRLFCAHCYVPWHPGR----------EELMMREL------------VKKKQLRKC 195
C FC HC WHP + + L +R + ++ C
Sbjct: 242 GREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIKPC 301
Query: 196 PNCKYHIERT--GGCLHMTC 213
P C +I + G C HMTC
Sbjct: 302 PRCAAYIIKMNDGSCNHMTC 321
>sp|O60260|PRKN2_HUMAN E3 ubiquitin-protein ligase parkin OS=Homo sapiens GN=PARK2 PE=1
SV=2
Length = 465
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 76/206 (36%), Gaps = 44/206 (21%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKI---------QGGIITP--VTCPG 94
+C C + R +F+ S H C DC + + T++ Q G P CP
Sbjct: 237 TCITCTDVRSPVLVFQCNS-RHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPN 295
Query: 95 PDCKSVLKFDACKSVLSKNVLELWEKALSQELIDASQGIYCPFKDCSAKLVYENDGEDVL 154
K + F +L + +++ ++E + G+ CP C A L+ E D V
Sbjct: 296 SLIKELHHF----RILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVT 351
Query: 155 SESECPY-CHRLFCAHCYVPWHPG--------------------------REELMMRELV 187
E C FC C +H G R E +E +
Sbjct: 352 CEGGNGLGCGFAFCRECKEAYHEGECSAVFEASGTTTQAYRVDERAAEQARWEAASKETI 411
Query: 188 KKKQLRKCPNCKYHIERTGGCLHMTC 213
KK + CP C +E+ GGC+HM C
Sbjct: 412 KKT-TKPCPRCHVPVEKNGGCMHMKC 436
>sp|A9JTG5|HOIL1_DANRE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio
rerio GN=rbck1 PE=2 SV=1
Length = 714
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 71/194 (36%), Gaps = 27/194 (13%)
Query: 42 PSRSSCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVL 101
P R C IC E+ + + C+H FC +C+ + + P C VL
Sbjct: 481 PERVECRICYVELESGEGVLLRECLHCFCKECLRSVILMSEDPQVACPYRDESYACDCVL 540
Query: 102 KFDACKSVLSKNVLELW-EKALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECP 160
+ ++++S + + W ++ LS +C DC VY ED ++ CP
Sbjct: 541 QEREIRALVSVDDYQHWLQRGLSVAESRCEGSYHCATADCPGWCVY----EDTVNTFHCP 596
Query: 161 YCHRLFCAHCYVPWHPG---------------------REELMMRELVKKKQLRKCPNCK 199
C + C C H G R +++ LV + CP C
Sbjct: 597 VCKKQNCLLCKA-IHEGMNCKQYQDDLTARAINDSAARRTRDLLKTLVNSGEAMHCPQCG 655
Query: 200 YHIERTGGCLHMTC 213
+++ GC + C
Sbjct: 656 IIVQKKEGCDWLRC 669
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 34/192 (17%)
Query: 46 SCEICRERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDA 105
+C IC ++++ + F +E C H +C +C ++ K+ G I +TC DC LK +
Sbjct: 178 TCIICCDKKDT-ETFALE-CGHEYCINCYRHYIKDKLHEGNI--ITCM--DCSLALKNED 231
Query: 106 CKSVL----SKNVLELWEKALSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPY 161
V+ S +++ K+ Q+ +CPF DC + +V+ D + + Y
Sbjct: 232 IDKVMGHPSSSKLMDSSIKSFVQK--HNRNYKWCPFADCKS-IVHLRDTSSLPEYTRLHY 288
Query: 162 C--------HRLFCAHCYVPWHPGREELMMRELVKKKQ------------LRKCPNCKYH 201
HR FC +C H + + VKK + ++CP C +
Sbjct: 289 SPFVKCNSFHR-FCFNCGFEVHSPADCKITTAWVKKARKESEILNWVLSHTKECPKCSVN 347
Query: 202 IERTGGCLHMTC 213
IE+ GGC HM C
Sbjct: 348 IEKNGGCNHMVC 359
>sp|Q9P2G1|AKIB1_HUMAN Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens
GN=ANKIB1 PE=1 SV=3
Length = 1089
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 70/188 (37%), Gaps = 40/188 (21%)
Query: 65 CIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDACKSVLSKNVLELWEKALSQ 124
C H FC C + KIQ G + CP DC ++ D +SV+SK + + + + +
Sbjct: 351 CGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIK 410
Query: 125 ELIDASQGI-YCPFKDCS-----AKLVYENDGEDVLS-------ESECPYCHRLFCAHC- 170
++ + I +CP C K G D LS +C H LFC C
Sbjct: 411 AFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGKGH-LFCWECL 469
Query: 171 -----------YVPWHPGREELMMRELVKKKQL--------------RKCPNCKYHIERT 205
+ W E+ ELV + + C NCK I++
Sbjct: 470 GEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKN 529
Query: 206 GGCLHMTC 213
GC HM C
Sbjct: 530 EGCNHMQC 537
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 46/208 (22%)
Query: 47 CEICR-ERRENDQMFKIESCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDA 105
C IC E+ ++ M+ +E C H +C C+ + +I+ G + + CP P C SV
Sbjct: 220 CSICFCEKLGSECMYFLE-CRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQ 278
Query: 106 CKSVLSKNVLELWEKALSQELID-ASQGIYCPFKDCSAKLVYENDGEDVLSESECPYCHR 164
K ++ + +++ L Q +D + +YCP + C V + G + C C+
Sbjct: 279 VKELVEAELFARYDRLLLQSSLDLMADVVYCP-RPCCQLPVMQEPG---CTMGICSSCNF 334
Query: 165 LFCAHCYVPWHP------GREELM-----------------------------MRELVKK 189
FC C + +H E+LM + E+ K
Sbjct: 335 AFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESK 394
Query: 190 KQLRK----CPNCKYHIERTGGCLHMTC 213
+ L K CP C IE+ GC MTC
Sbjct: 395 EWLEKNSKSCPCCGTPIEKLDGCNKMTC 422
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 65 CIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDACKSVLSK-NVLELWEKALS 123
C+H C C N+++ T+I+ ++ TCP DC + ++++S V+ +EKAL
Sbjct: 2088 CMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAFIRAIVSSPEVISKYEKALL 2147
Query: 124 QELIDA-SQGIYCPF-KDCSAKLVYENDGEDVLSESECPYCHRLFCAHCYVP-------- 173
+ +++ S +C + C L + G + C C C +C P
Sbjct: 2148 RGYVESCSNLTWCTNPQGCDRILCRQGLG----CGTTCSKCGWASCFNCSFPEAHYPASC 2203
Query: 174 -----------WHPGREELMMRELVKKKQLRKCPNCKYHIERTGGCLHMTC 213
++ G + + K ++CP+C+ IE+ GCLHMTC
Sbjct: 2204 GHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAPIEKNEGCLHMTC 2254
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 64 SCIHSFCSDCINKHVATKIQGGIITPVTCPGPDCKSVLKFDACKSVLSKN-VLEL-WEKA 121
+C H FC C HV +++ G+ + + C +C+ + S++ + V++L +E+
Sbjct: 144 TCGHCFCEHCWKSHVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKLKYERF 203
Query: 122 LSQELIDASQGI-YCPFKDCSAKLVYENDGEDVLSESECPYCHRLFCAHCYVPWH-PGRE 179
L ++++++ + +C +C + E C CH FC C +H P
Sbjct: 204 LLRDMVNSHPHLKFCVGNECPVII---RSTEVKPKRVTCMQCHTSFCVKCGADYHAPTSC 260
Query: 180 ELMMRELVK-----------KKQLRKCPNCKYHIERTGGCLHMTC 213
E + + + K + CP C IE+ GGC H+ C
Sbjct: 261 ETIKQWMTKCADDSETANYISAHTKDCPQCHSCIEKAGGCNHIQC 305
>sp|Q9JK66|PRKN2_RAT E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus GN=Park2
PE=1 SV=1
Length = 465
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 66/179 (36%), Gaps = 35/179 (19%)
Query: 65 CIHSFCSDCIN-KHVATKIQGGIITP--VTCPGPDCKSVLKFDACKSVLSKNVLELWEKA 121
C H +C +N + Q G P CP K + F +L + +++
Sbjct: 263 CFHLYCVTRLNDRQFVHDAQLGYSLPCVAGCPNSLIKELHHF----RILGEEQYNRYQQY 318
Query: 122 LSQELIDASQGIYCPFKDCSAKLVYENDGEDVLSESECPY-CHRLFCAHCYVPWHPG--- 177
++E + G+ CP C A L+ E + V E C +FC C +H G
Sbjct: 319 GAEECVLQMGGVLCPRPGCGAGLLPEQGQKKVTCEGGNGLGCGFVFCRDCKEAYHEGECD 378
Query: 178 -----------------------REELMMRELVKKKQLRKCPNCKYHIERTGGCLHMTC 213
R E +E +KK + CP C IE+ GGC+HM C
Sbjct: 379 SMFEASGATSQAYRVDQRAAEQARWEEASKETIKKT-TKPCPRCNVPIEKNGGCMHMKC 436
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,601,574
Number of Sequences: 539616
Number of extensions: 2854927
Number of successful extensions: 9568
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 9284
Number of HSP's gapped (non-prelim): 283
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)