Query 045389
Match_columns 136
No_of_seqs 119 out of 553
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 22:41:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045389.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045389hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 2.4E-49 8E-54 316.3 7.9 132 2-136 2-161 (236)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2E-48 6.8E-53 314.5 8.8 129 5-136 29-184 (261)
3 3uzd_A 14-3-3 protein gamma; s 100.0 3.8E-48 1.3E-52 311.2 8.8 128 6-136 3-159 (248)
4 1o9d_A 14-3-3-like protein C; 100.0 2.7E-47 9.2E-52 308.1 9.0 133 1-136 1-163 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 9E-47 3.1E-51 301.2 8.8 128 6-136 4-158 (234)
6 2npm_A 14-3-3 domain containin 100.0 8.6E-47 2.9E-51 305.1 6.2 129 5-136 26-184 (260)
7 2o8p_A 14-3-3 domain containin 100.0 3E-44 1E-48 285.3 8.6 120 6-136 2-153 (227)
8 3efz_A 14-3-3 protein; 14-3-3, 100.0 1.9E-44 6.6E-49 292.1 5.9 124 6-136 28-180 (268)
9 1lyp_A CAP18; lipopolysacchari 70.1 11 0.00036 20.4 4.3 26 56-81 4-29 (32)
10 3bee_A Putative YFRE protein; 52.1 19 0.00067 23.0 4.1 31 8-38 44-74 (93)
11 3ma5_A Tetratricopeptide repea 50.4 30 0.001 21.3 4.7 32 7-38 7-38 (100)
12 4ga2_A E3 SUMO-protein ligase 47.9 24 0.00082 23.6 4.2 29 10-38 34-62 (150)
13 2kck_A TPR repeat; tetratricop 47.3 21 0.00071 21.1 3.4 29 10-38 79-108 (112)
14 3k9i_A BH0479 protein; putativ 43.5 34 0.0012 21.4 4.2 30 9-38 29-58 (117)
15 4gco_A Protein STI-1; structur 42.4 34 0.0012 22.2 4.2 30 9-38 83-112 (126)
16 1na3_A Designed protein CTPR2; 40.0 52 0.0018 18.7 4.9 30 9-38 11-40 (91)
17 2pl2_A Hypothetical conserved 37.3 42 0.0014 23.6 4.3 36 3-38 1-36 (217)
18 3gyz_A Chaperone protein IPGC; 37.0 49 0.0017 22.6 4.5 31 8-38 37-67 (151)
19 3gyz_A Chaperone protein IPGC; 37.0 54 0.0018 22.4 4.7 31 8-38 71-101 (151)
20 2l6j_A TPR repeat-containing p 36.1 67 0.0023 18.9 4.8 31 8-38 5-35 (111)
21 2kc7_A BFR218_protein; tetratr 35.9 68 0.0023 18.9 4.9 28 11-38 4-31 (99)
22 3vtx_A MAMA; tetratricopeptide 34.3 73 0.0025 21.0 4.9 29 10-38 110-138 (184)
23 2yhc_A BAMD, UPF0169 lipoprote 33.9 58 0.002 22.9 4.5 30 9-38 186-215 (225)
24 1hxi_A PEX5, peroxisome target 33.4 82 0.0028 20.0 4.9 30 9-38 19-48 (121)
25 2xev_A YBGF; tetratricopeptide 33.3 61 0.0021 19.9 4.1 29 10-38 79-107 (129)
26 2kat_A Uncharacterized protein 33.1 84 0.0029 19.2 5.0 32 7-38 19-50 (115)
27 2xcb_A PCRH, regulatory protei 32.8 83 0.0028 20.2 4.9 30 9-38 20-49 (142)
28 2vyi_A SGTA protein; chaperone 32.6 65 0.0022 19.2 4.1 25 11-35 50-74 (131)
29 3vtx_A MAMA; tetratricopeptide 32.5 74 0.0025 21.0 4.7 30 9-38 7-36 (184)
30 2vgx_A Chaperone SYCD; alterna 32.1 81 0.0028 20.9 4.9 30 9-38 23-52 (148)
31 3rkv_A Putative peptidylprolyl 31.5 55 0.0019 21.5 3.9 29 10-38 100-128 (162)
32 2r5s_A Uncharacterized protein 31.4 83 0.0028 21.0 4.9 32 7-38 108-139 (176)
33 3upv_A Heat shock protein STI1 31.0 80 0.0027 19.5 4.5 31 8-38 5-35 (126)
34 2e2e_A Formate-dependent nitri 30.2 1.1E+02 0.0038 20.0 5.3 27 11-37 119-145 (177)
35 1elw_A TPR1-domain of HOP; HOP 30.1 85 0.0029 18.3 4.9 31 8-38 39-69 (118)
36 2dba_A Smooth muscle cell asso 29.3 78 0.0027 19.6 4.2 24 12-35 70-93 (148)
37 2xcb_A PCRH, regulatory protei 28.9 86 0.0029 20.1 4.5 29 10-38 55-83 (142)
38 3urz_A Uncharacterized protein 28.3 99 0.0034 21.4 5.0 26 13-38 60-85 (208)
39 2lni_A Stress-induced-phosphop 27.7 77 0.0026 19.1 3.9 27 10-36 53-79 (133)
40 1elr_A TPR2A-domain of HOP; HO 27.6 1E+02 0.0035 18.3 4.5 31 8-38 5-35 (131)
41 1use_A VAsp, vasodilator-stimu 27.2 97 0.0033 18.2 3.8 26 60-85 15-40 (45)
42 3sz7_A HSC70 cochaperone (SGT) 26.6 95 0.0033 20.3 4.4 31 8-38 12-42 (164)
43 2vgx_A Chaperone SYCD; alterna 26.3 99 0.0034 20.4 4.5 29 10-38 58-86 (148)
44 1hxi_A PEX5, peroxisome target 26.3 90 0.0031 19.8 4.1 27 12-38 56-82 (121)
45 4ga2_A E3 SUMO-protein ligase 26.2 1.2E+02 0.0042 19.9 4.9 32 7-38 65-96 (150)
46 3q49_B STIP1 homology and U bo 25.2 1.2E+02 0.004 18.7 4.5 32 7-38 9-40 (137)
47 3sz7_A HSC70 cochaperone (SGT) 25.0 97 0.0033 20.3 4.2 31 8-38 46-76 (164)
48 1iwp_G Glycerol dehydratase ga 24.9 61 0.0021 23.5 3.2 39 6-45 50-88 (141)
49 4gco_A Protein STI-1; structur 24.8 1.4E+02 0.0048 19.0 4.9 29 10-38 16-44 (126)
50 2v5f_A Prolyl 4-hydroxylase su 24.8 1.3E+02 0.0045 18.7 4.7 33 4-36 2-34 (104)
51 2pl2_A Hypothetical conserved 24.4 1.3E+02 0.0043 21.0 4.9 31 8-38 40-70 (217)
52 2w2u_A Hypothetical P60 katani 24.3 1E+02 0.0035 19.7 4.0 27 9-35 21-47 (83)
53 3as5_A MAMA; tetratricopeptide 24.2 95 0.0033 19.7 4.0 31 8-38 111-141 (186)
54 1eex_G Propanediol dehydratase 23.7 2.1E+02 0.0071 21.3 6.0 39 6-45 82-120 (173)
55 2pmr_A Uncharacterized protein 23.5 1.3E+02 0.0044 19.8 4.4 26 73-106 32-57 (87)
56 2yhc_A BAMD, UPF0169 lipoprote 22.9 1.3E+02 0.0044 21.0 4.7 31 8-38 5-35 (225)
57 2fbn_A 70 kDa peptidylprolyl i 22.5 1.1E+02 0.0037 20.7 4.2 24 12-35 93-116 (198)
58 1a17_A Serine/threonine protei 21.8 1.6E+02 0.0054 18.5 4.9 30 9-38 49-78 (166)
59 2oo2_A Hypothetical protein AF 21.4 51 0.0017 21.8 2.0 42 57-106 10-53 (86)
60 3urz_A Uncharacterized protein 21.1 99 0.0034 21.4 3.8 32 7-38 4-35 (208)
61 3qky_A Outer membrane assembly 20.8 1.7E+02 0.0057 20.6 5.0 32 7-38 15-46 (261)
62 1na0_A Designed protein CTPR3; 20.6 1.4E+02 0.0047 17.4 4.9 31 8-38 44-74 (125)
63 2v6y_A AAA family ATPase, P60 20.3 1.4E+02 0.0048 18.9 4.0 27 9-35 13-39 (83)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=2.4e-49 Score=316.35 Aligned_cols=132 Identities=42% Similarity=0.641 Sum_probs=123.8
Q ss_pred CCCC-ChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC--CCCCccc-----------hhc---------cc-----chh
Q 045389 2 AAPS-PREENVYMAKLAEQAEWYEKMVQYMEKVIVSAS--TSEEPPL-----------RRL---------QE-----RHR 53 (136)
Q Consensus 2 ~m~~-~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~--s~EERnL-----------rR~---------qk-----~~~ 53 (136)
||+. +|+++||+||||||||||||||++||+|++.++ |+||||| ||+ || ++.
T Consensus 2 ~~~~~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~ 81 (236)
T 3iqu_A 2 AMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEE 81 (236)
T ss_dssp TTTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred CcccccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHH
Confidence 4554 899999999999999999999999999999987 9999999 666 44 456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCcchHHHHhhhccccccccchhhcccCchhHHHHHHHHHHHHHH
Q 045389 54 RTARLLEYRLKIEAELTEICSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNAYKS 133 (136)
Q Consensus 54 ~~~~i~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~aY~~ 133 (136)
+++.+++||+||++||..||++||+|||++|||++++++|+|||+|||||||| |+|||.+|++|++++++|++||++
T Consensus 82 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyR---YlAE~~~g~~r~~~~e~a~~aY~~ 158 (236)
T 3iqu_A 82 KGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYR---YLAEVATGDDKKRIIDSARSAYQE 158 (236)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHH---HHHHHCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHH---HHHHhcCchHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hhC
Q 045389 134 AQV 136 (136)
Q Consensus 134 A~~ 136 (136)
|++
T Consensus 159 A~~ 161 (236)
T 3iqu_A 159 AMD 161 (236)
T ss_dssp HHH
T ss_pred HHH
Confidence 963
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=314.50 Aligned_cols=129 Identities=52% Similarity=0.730 Sum_probs=122.1
Q ss_pred CChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC--CCCCccc-----------hhc---------cc-----chhhhHH
Q 045389 5 SPREENVYMAKLAEQAEWYEKMVQYMEKVIVSAS--TSEEPPL-----------RRL---------QE-----RHRRTAR 57 (136)
Q Consensus 5 ~~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~--s~EERnL-----------rR~---------qk-----~~~~~~~ 57 (136)
.+|+++||+||||||||||||||++||+|++.++ |+||||| ||+ || ++.+++.
T Consensus 29 ~~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~ 108 (261)
T 3ubw_A 29 DDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKM 108 (261)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHH
Confidence 3799999999999999999999999999999987 9999999 666 44 5678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCcchHHHHhhhccccccccchhhcccCchhHHHHHHHHHHHHHHhhC
Q 045389 58 LLEYRLKIEAELTEICSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNAYKSAQV 136 (136)
Q Consensus 58 i~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~aY~~A~~ 136 (136)
|++||+||++||..||++||+|||++|||++++++|+|||+|||||||| |+|||.+|++|++++++|++||++|++
T Consensus 109 i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyR---YlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 109 IREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHR---YLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHH---HHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999963
No 3
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=3.8e-48 Score=311.21 Aligned_cols=128 Identities=44% Similarity=0.643 Sum_probs=121.0
Q ss_pred ChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC--CCCCccc-----------hhc---------cc-----chhhhHHH
Q 045389 6 PREENVYMAKLAEQAEWYEKMVQYMEKVIVSAS--TSEEPPL-----------RRL---------QE-----RHRRTARL 58 (136)
Q Consensus 6 ~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~--s~EERnL-----------rR~---------qk-----~~~~~~~i 58 (136)
+|+++||+||||||||||||||++||+|++.++ |+||||| ||+ || ++.+++.|
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i 82 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV 82 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 799999999999999999999999999999987 9999999 666 44 56688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCc--chHHHHhhhccccccccchhhcccCchhHHHHHHHHHHHHHHhhC
Q 045389 59 LEYRLKIEAELTEICSGILKLLDQKLVPTAAAA--DSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNAYKSAQV 136 (136)
Q Consensus 59 ~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~--eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~aY~~A~~ 136 (136)
++||++|++||..||++||+|||++|||+++++ +|+|||+|||||||| |+|||.+|++|+.++++|++||++|++
T Consensus 83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyR---YlAE~~~g~~r~~~~~~a~~aY~~A~~ 159 (248)
T 3uzd_A 83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYR---YLAEVATGEKRATVVESSEKAYSEAHE 159 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHH---HHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999 999999999999999999999999963
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=2.7e-47 Score=308.10 Aligned_cols=133 Identities=67% Similarity=0.924 Sum_probs=123.2
Q ss_pred CC-CCCChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhC--C--CCCCccc-----------hhc---------cc-----
Q 045389 1 MA-APSPREENVYMAKLAEQAEWYEKMVQYMEKVIVSA--S--TSEEPPL-----------RRL---------QE----- 50 (136)
Q Consensus 1 ~~-m~~~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~--~--s~EERnL-----------rR~---------qk----- 50 (136)
|| ++.+|+++||+||||+||||||||+++||++++.+ + |+||||| ||+ ||
T Consensus 1 ~~~~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~ 80 (260)
T 1o9d_A 1 MAVAPTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (260)
T ss_dssp ----CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccC
Confidence 56 66789999999999999999999999999999988 6 9999999 666 44
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCcchHHHHhhhccccccccchhhcccCchhHHHHHHHHHHH
Q 045389 51 RHRRTARLLEYRLKIEAELTEICSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNA 130 (136)
Q Consensus 51 ~~~~~~~i~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~a 130 (136)
++.+++.|++||+||++||..||++||+|||++|||.+++++++|||+|||||||| |+|||.+|++|+.++++|++|
T Consensus 81 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyR---YlaE~~~g~~r~~~~e~a~~a 157 (260)
T 1o9d_A 81 NEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHR---YLAEFKTGAERKEAAESTLTA 157 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHH---HHHHHCCSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHH---HHHHhcCchHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHhhC
Q 045389 131 YKSAQV 136 (136)
Q Consensus 131 Y~~A~~ 136 (136)
|++|++
T Consensus 158 Y~~A~~ 163 (260)
T 1o9d_A 158 YKAAQD 163 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999973
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=9e-47 Score=301.16 Aligned_cols=128 Identities=52% Similarity=0.734 Sum_probs=121.5
Q ss_pred ChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC--CCCCccc-----------hhc---------cc-----chhhhHHH
Q 045389 6 PREENVYMAKLAEQAEWYEKMVQYMEKVIVSAS--TSEEPPL-----------RRL---------QE-----RHRRTARL 58 (136)
Q Consensus 6 ~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~--s~EERnL-----------rR~---------qk-----~~~~~~~i 58 (136)
+|+++||+||||+||||||||+++||++++.++ |+||||| ||+ || ++.+++.|
T Consensus 4 ~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~~i 83 (234)
T 2br9_A 4 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 83 (234)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHHHH
Confidence 699999999999999999999999999999887 9999999 666 44 45788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCcchHHHHhhhccccccccchhhcccCchhHHHHHHHHHHHHHHhhC
Q 045389 59 LEYRLKIEAELTEICSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNAYKSAQV 136 (136)
Q Consensus 59 ~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~aY~~A~~ 136 (136)
++||+||++||..+|++||+|||++|||.++++|++|||+|||||||| |+|||.+|++|++++++|++||++|++
T Consensus 84 ~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyR---YlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 84 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHR---YLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHH---HHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 999999999999999999999999973
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=8.6e-47 Score=305.13 Aligned_cols=129 Identities=53% Similarity=0.821 Sum_probs=121.0
Q ss_pred CChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhC---C--CCCCccc-----------hhc---------cc-----chhh
Q 045389 5 SPREENVYMAKLAEQAEWYEKMVQYMEKVIVSA---S--TSEEPPL-----------RRL---------QE-----RHRR 54 (136)
Q Consensus 5 ~~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~---~--s~EERnL-----------rR~---------qk-----~~~~ 54 (136)
.+|+++||+||||+||||||||+++||++++.+ + |+||||| ||+ || ++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 469999999999999999999999999999987 6 9999999 666 44 4578
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCcchHHHHhhhccccccccchhhcccCchhHHHHHHHHHHHHHHh
Q 045389 55 TARLLEYRLKIEAELTEICSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNAYKSA 134 (136)
Q Consensus 55 ~~~i~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~aY~~A 134 (136)
++.|++||+||++||..+|++||+|||++|||.++++|++|||+|||||||| |+|||.+|++|++++++|++||++|
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyR---YlaE~~~g~~r~~~~e~a~~aY~~A 182 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHR---YISEFSTGDSKQSSAEDALKAYKDA 182 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHH---HHHHhcCchHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hC
Q 045389 135 QV 136 (136)
Q Consensus 135 ~~ 136 (136)
++
T Consensus 183 ~~ 184 (260)
T 2npm_A 183 TV 184 (260)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 7
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=3e-44 Score=285.32 Aligned_cols=120 Identities=22% Similarity=0.264 Sum_probs=112.1
Q ss_pred ChHHHH---HHHHhHHHhcCHHHHHHHHHHHHh----hCC--CCCCccc-----------hhc---------cc---chh
Q 045389 6 PREENV---YMAKLAEQAEWYEKMVQYMEKVIV----SAS--TSEEPPL-----------RRL---------QE---RHR 53 (136)
Q Consensus 6 ~re~~v---~~AklaeqaeRy~dMv~~mk~~v~----~~~--s~EERnL-----------rR~---------qk---~~~ 53 (136)
+|+++| |+|||||||||||||+++||++++ .++ |+||||| ||+ || ++.
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqkek~~~~ 81 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQLNNDE 81 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHH
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHcCCHH
Confidence 589999 999999999999999999999999 776 9999999 666 44 567
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCcchHHHHhhhccccccccchhhcccCchhHHHHHHHHHHHHHH
Q 045389 54 RTARLLEYRLKIEAELTEICSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNAYKS 133 (136)
Q Consensus 54 ~~~~i~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~aY~~ 133 (136)
+++.|++||++|++||..||++||+|||++|||++ ||+|||+|||||||| |+|||.+|+ +++|++||++
T Consensus 82 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyR---YlAE~~~g~-----~e~a~~aY~~ 150 (227)
T 2o8p_A 82 LVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISR---YKLEFGLCS-----LEDSKKIHQD 150 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHH---HHHHTTSSC-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHH---HHHHHcccc-----HHHHHHHHHH
Confidence 88999999999999999999999999999999998 999999999999999 999999998 9999999999
Q ss_pred hhC
Q 045389 134 AQV 136 (136)
Q Consensus 134 A~~ 136 (136)
|++
T Consensus 151 A~~ 153 (227)
T 2o8p_A 151 AFT 153 (227)
T ss_dssp HHH
T ss_pred HHH
Confidence 973
No 8
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=1.9e-44 Score=292.06 Aligned_cols=124 Identities=19% Similarity=0.314 Sum_probs=96.4
Q ss_pred ChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC--CCCCccc-----------hhc---------cc------c-hhhhH
Q 045389 6 PREENVYMAKLAEQAEWYEKMVQYMEKVIVSAS--TSEEPPL-----------RRL---------QE------R-HRRTA 56 (136)
Q Consensus 6 ~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~--s~EERnL-----------rR~---------qk------~-~~~~~ 56 (136)
+|+++||+||||||||||||||++| ++.++ |+||||| ||+ || + +.+++
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~ 104 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQ 104 (268)
T ss_dssp ------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHH
Confidence 6999999999999999999999999 67776 9999999 666 33 2 56789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCcchHHHHhhhccccccccchhhcccCchhHHHHHHHHHHHHHHhhC
Q 045389 57 RLLEYRLKIEAELTEICSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLLSLLNLAEFKTGDERKVAVENTLNAYKSAQV 136 (136)
Q Consensus 57 ~i~~yr~kie~EL~~iC~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR~~~YlAE~~~~~~~~~~~~~a~~aY~~A~~ 136 (136)
.|++||+||++||..||++||+|||++|||.++++ ++|||+|||||||| |+|||.+|++|++++++|++||++|++
T Consensus 105 ~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyR---YlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 105 VIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMR---YKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHH---HHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999 999999999999999999999999963
No 9
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=70.11 E-value=11 Score=20.36 Aligned_cols=26 Identities=38% Similarity=0.497 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045389 56 ARLLEYRLKIEAELTEICSGILKLLD 81 (136)
Q Consensus 56 ~~i~~yr~kie~EL~~iC~dil~lid 81 (136)
+.++.||.+|.+.|..|-+.|-.|+-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 46789999999999999999987764
No 10
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.08 E-value=19 Score=22.96 Aligned_cols=31 Identities=6% Similarity=-0.049 Sum_probs=27.6
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.-++.++.++-+.|+|++.+.+-.++.+.++
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 4578899999999999999999999988765
No 11
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=50.44 E-value=30 Score=21.28 Aligned_cols=32 Identities=6% Similarity=0.052 Sum_probs=27.9
Q ss_pred hHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 7 REENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 7 re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-.-+..+|.+.-+.|+|++.+.+++++++.+|
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 38 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDP 38 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34567889999999999999999999999877
No 12
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=47.92 E-value=24 Score=23.56 Aligned_cols=29 Identities=28% Similarity=0.349 Sum_probs=26.5
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.+.+|++..+.|+|++.+++.+++++.+|
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p 62 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQE 62 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999877
No 13
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=47.26 E-value=21 Score=21.08 Aligned_cols=29 Identities=3% Similarity=-0.265 Sum_probs=15.8
Q ss_pred HHHHHHhHHHh-cCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQA-EWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~Aklaeqa-eRy~dMv~~mk~~v~~~~ 38 (136)
+..+|.+..+. |+|++.+++++.++...|
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhhccc
Confidence 34455555555 555555555555555444
No 14
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=43.46 E-value=34 Score=21.40 Aligned_cols=30 Identities=7% Similarity=-0.055 Sum_probs=26.5
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+..++.+.-+.|+|++.+.+.+++++.+|
T Consensus 29 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 58 (117)
T 3k9i_A 29 CYLGLGSTFRTLGEYRKAEAVLANGVKQFP 58 (117)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 467788888999999999999999998876
No 15
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=42.45 E-value=34 Score=22.20 Aligned_cols=30 Identities=10% Similarity=-0.005 Sum_probs=20.4
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+..++.+..+.|+|++.+.+.+++++.+|
T Consensus 83 a~~~lg~~~~~~~~~~~A~~~~~~al~l~P 112 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKAQRAYEDALQVDP 112 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCc
Confidence 355666667777777777777777776655
No 16
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=39.96 E-value=52 Score=18.74 Aligned_cols=30 Identities=10% Similarity=0.163 Sum_probs=25.1
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+..+|.+..+.|+|++.+.+.++++..++
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~ 40 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDP 40 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 456678888888999999999999888877
No 17
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=37.32 E-value=42 Score=23.63 Aligned_cols=36 Identities=6% Similarity=0.149 Sum_probs=23.1
Q ss_pred CCCChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 3 APSPREENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 3 m~~~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
|+.+-+-+..++.+.-+.|+|++.+....+++..+|
T Consensus 1 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 36 (217)
T 2pl2_A 1 MQTAEQNPLRLGVQLYALGRYDAALTLFERALKENP 36 (217)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSS
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 444445566677777777777777777777776655
No 18
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=36.98 E-value=49 Score=22.65 Aligned_cols=31 Identities=6% Similarity=-0.092 Sum_probs=27.5
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+-+..++...-+.|+|++.+.+.++++..+|
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P 67 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDF 67 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4577888999999999999999999998876
No 19
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=36.96 E-value=54 Score=22.43 Aligned_cols=31 Identities=6% Similarity=0.077 Sum_probs=26.7
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.-...++.+..+.|+|++.+.+.++++..+|
T Consensus 71 ~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P 101 (151)
T 3gyz_A 71 DYIMGLAAIYQIKEQFQQAADLYAVAFALGK 101 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCC
Confidence 3456678888999999999999999999887
No 20
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=36.14 E-value=67 Score=18.95 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=22.9
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+.+..++...-..|+|++.+....+++..+|
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQP 35 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 3456677777777888888888888777776
No 21
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=35.86 E-value=68 Score=18.88 Aligned_cols=28 Identities=14% Similarity=0.068 Sum_probs=20.1
Q ss_pred HHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 11 VYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 11 v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+..|...-+.|+|++.+...+++++.++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p 31 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEP 31 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 4556666677777777777777777766
No 22
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=34.29 E-value=73 Score=21.03 Aligned_cols=29 Identities=14% Similarity=0.079 Sum_probs=15.2
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
...++.+..+.|+|++.+++.+++++.+|
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~~l~~~p 138 (184)
T 3vtx_A 110 YYKLGLVYDSMGEHDKAIEAYEKTISIKP 138 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHhcc
Confidence 34445555555555555555555555443
No 23
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=33.90 E-value=58 Score=22.90 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=21.9
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+..++.+..+.|++++.+++++.+...+|
T Consensus 186 a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~ 215 (225)
T 2yhc_A 186 ALPLMENAYRQMQMNAQAEKVAKIIAANSS 215 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHhhCC
Confidence 356677777777888888888777766666
No 24
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=33.37 E-value=82 Score=20.02 Aligned_cols=30 Identities=7% Similarity=-0.116 Sum_probs=25.0
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
..+.+|...-+.|+|++.+...++++..+|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P 48 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEP 48 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 467778888888899998888888888877
No 25
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=33.30 E-value=61 Score=19.86 Aligned_cols=29 Identities=7% Similarity=-0.079 Sum_probs=18.5
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+..+|.+..+.|+|++.+.++++++...|
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 45566666666777777777666665543
No 26
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=33.09 E-value=84 Score=19.15 Aligned_cols=32 Identities=6% Similarity=0.025 Sum_probs=27.4
Q ss_pred hHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 7 REENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 7 re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-.-+..+|.+..+.|+|++.+.+.++++..++
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 50 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDP 50 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC
Confidence 34567788999999999999999999998866
No 27
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=32.80 E-value=83 Score=20.22 Aligned_cols=30 Identities=7% Similarity=-0.011 Sum_probs=20.4
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+..+|...-+.|+|++.+...++++..+|
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p 49 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLDH 49 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhCC
Confidence 345566666677777777777777776666
No 28
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=32.63 E-value=65 Score=19.18 Aligned_cols=25 Identities=24% Similarity=0.141 Sum_probs=11.8
Q ss_pred HHHHHhHHHhcCHHHHHHHHHHHHh
Q 045389 11 VYMAKLAEQAEWYEKMVQYMEKVIV 35 (136)
Q Consensus 11 v~~AklaeqaeRy~dMv~~mk~~v~ 35 (136)
..+|.+..+.|+|++.+.+..+++.
T Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 50 CNRAAAYSKLGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHh
Confidence 3444444444555555554444443
No 29
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=32.50 E-value=74 Score=21.00 Aligned_cols=30 Identities=7% Similarity=0.091 Sum_probs=22.9
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-...++.+..+-|+|++.+.+.+++++.+|
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p 36 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADP 36 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 345577777788888888888888887766
No 30
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=32.13 E-value=81 Score=20.85 Aligned_cols=30 Identities=17% Similarity=0.058 Sum_probs=19.5
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+..+|.+.-+.|+|++.+...++++..+|
T Consensus 23 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 52 (148)
T 2vgx_A 23 QLYSLAFNQYQSGXYEDAHXVFQALCVLDH 52 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHcCc
Confidence 344556666666777777777776666666
No 31
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=31.48 E-value=55 Score=21.48 Aligned_cols=29 Identities=10% Similarity=-0.063 Sum_probs=16.2
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+..++.+....|+|++.+...++++..+|
T Consensus 100 ~~~~g~~~~~~g~~~~A~~~~~~al~l~p 128 (162)
T 3rkv_A 100 LFRRAKARIAAWKLDEAEEDLKLLLRNHP 128 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCC
Confidence 44455555555666666666655555533
No 32
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=31.44 E-value=83 Score=21.02 Aligned_cols=32 Identities=13% Similarity=0.008 Sum_probs=26.9
Q ss_pred hHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 7 REENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 7 re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+-+..++.+..+.|+|++.+.+..+++..+|
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p 139 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKVNL 139 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCc
Confidence 34567788888999999999999999988876
No 33
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=30.97 E-value=80 Score=19.50 Aligned_cols=31 Identities=19% Similarity=0.068 Sum_probs=26.8
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+.+..++...-+.|+|++.+.+..+++..+|
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAP 35 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 4567788888999999999999999998866
No 34
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=30.17 E-value=1.1e+02 Score=20.01 Aligned_cols=27 Identities=19% Similarity=0.181 Sum_probs=11.9
Q ss_pred HHHHHhHHHhcCHHHHHHHHHHHHhhC
Q 045389 11 VYMAKLAEQAEWYEKMVQYMEKVIVSA 37 (136)
Q Consensus 11 v~~AklaeqaeRy~dMv~~mk~~v~~~ 37 (136)
..+|.+..+.|+|++.+.++++++..+
T Consensus 119 ~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 119 MLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 334444444444444444444444433
No 35
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=30.15 E-value=85 Score=18.28 Aligned_cols=31 Identities=10% Similarity=-0.139 Sum_probs=24.8
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.-+..+|.+..+.|+|++.+...++++..++
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 69 (118)
T 1elw_A 39 VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69 (118)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhCc
Confidence 4456678888888889888888888888777
No 36
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.30 E-value=78 Score=19.59 Aligned_cols=24 Identities=25% Similarity=0.083 Sum_probs=11.2
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHh
Q 045389 12 YMAKLAEQAEWYEKMVQYMEKVIV 35 (136)
Q Consensus 12 ~~AklaeqaeRy~dMv~~mk~~v~ 35 (136)
.+|.+.-+.++|++.+.+.++++.
T Consensus 70 ~~a~~~~~~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 70 NRAACHLKLEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHh
Confidence 344444444455554444444443
No 37
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=28.90 E-value=86 Score=20.13 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=24.8
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+..++.+..+.|+|++.+.+.++++..+|
T Consensus 55 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 55 FLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34567888889999999999999998877
No 38
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=28.33 E-value=99 Score=21.44 Aligned_cols=26 Identities=15% Similarity=0.290 Sum_probs=19.6
Q ss_pred HHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 13 MAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 13 ~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+|.+..+.|+|++.+.+.+++++.+|
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p 85 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAP 85 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCC
Confidence 66677777777777777777777776
No 39
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=27.73 E-value=77 Score=19.10 Aligned_cols=27 Identities=11% Similarity=-0.063 Sum_probs=13.8
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhh
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVS 36 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~ 36 (136)
+..+|.+..+.|+|++.+.+.++++..
T Consensus 53 ~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 53 YSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 344455555555555555555555443
No 40
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=27.59 E-value=1e+02 Score=18.33 Aligned_cols=31 Identities=6% Similarity=0.002 Sum_probs=26.3
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+.+..+|.+.-+.|+|++.+.++++++...+
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 35 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDP 35 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 3466788899999999999999999988765
No 41
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=27.18 E-value=97 Score=18.17 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Q 045389 60 EYRLKIEAELTEICSGILKLLDQKLV 85 (136)
Q Consensus 60 ~yr~kie~EL~~iC~dil~lid~~Li 85 (136)
+....+..||...-++||+-|.+-|-
T Consensus 15 EIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 15 ELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677889999999998876553
No 42
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=26.57 E-value=95 Score=20.28 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=26.4
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+.+..++.+.-+.|+|++.+.+..+++..++
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 42 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIAP 42 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4567788888899999999999999988765
No 43
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=26.30 E-value=99 Score=20.41 Aligned_cols=29 Identities=7% Similarity=-0.036 Sum_probs=24.7
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+..++.+..+.|+|++.+.+.++++..+|
T Consensus 58 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 58 FLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34567888899999999999999998876
No 44
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=26.28 E-value=90 Score=19.82 Aligned_cols=27 Identities=4% Similarity=-0.077 Sum_probs=21.1
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 12 YMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 12 ~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.++.+..+.|+|++.+.+.+++++.+|
T Consensus 56 ~lg~~~~~~g~~~~A~~~~~~al~l~P 82 (121)
T 1hxi_A 56 SLGLTQAENEKDGLAIIALNHARMLDP 82 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 466777778888888888888887765
No 45
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=26.24 E-value=1.2e+02 Score=19.87 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=27.8
Q ss_pred hHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 7 REENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 7 re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+-+..++.+..+.|+|++.+.+.+++++.+|
T Consensus 65 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p 96 (150)
T 4ga2_A 65 PKAHRFLGLLYELEENTDKAVECYRRSVELNP 96 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCC
Confidence 34567789999999999999999999999876
No 46
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=25.16 E-value=1.2e+02 Score=18.67 Aligned_cols=32 Identities=9% Similarity=-0.007 Sum_probs=27.9
Q ss_pred hHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 7 REENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 7 re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+.+..++...-..|+|++.+.+.++++..+|
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~ 40 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP 40 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCc
Confidence 35678889999999999999999999988866
No 47
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=24.95 E-value=97 Score=20.26 Aligned_cols=31 Identities=16% Similarity=-0.111 Sum_probs=26.5
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.-+..++.+..+.|+|++.+.+.++++..++
T Consensus 46 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 76 (164)
T 3sz7_A 46 IYLSNRAAAYSASGQHEKAAEDAELATVVDP 76 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 3466788888899999999999999998876
No 48
>1iwp_G Glycerol dehydratase gamma subunit; cobalamin, radical catalysis, lyase; HET: B12; 2.10A {Klebsiella pneumoniae} SCOP: a.23.2.1 PDB: 1mmf_G*
Probab=24.94 E-value=61 Score=23.45 Aligned_cols=39 Identities=21% Similarity=0.257 Sum_probs=31.3
Q ss_pred ChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCCCCCCccc
Q 045389 6 PREENVYMAKLAEQAEWYEKMVQYMEKVIVSASTSEEPPL 45 (136)
Q Consensus 6 ~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~s~EERnL 45 (136)
+.+-|.+.|++|+.+||.. +..-....+++-.-+++|-|
T Consensus 50 spetL~~QaqIAe~~gr~~-~a~NfrRAAELt~VPD~riL 88 (141)
T 1iwp_G 50 SRQTLEYQAQIAEQMQRHA-VARNFRRAAELIAIPDERIL 88 (141)
T ss_dssp CHHHHHHHHHHHHTTTCHH-HHHHHHHHHTTTTSCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHH-HHHHHHHHHhcccCCHHHHH
Confidence 4688999999999999985 77777777777556677776
No 49
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=24.78 E-value=1.4e+02 Score=19.04 Aligned_cols=29 Identities=3% Similarity=-0.057 Sum_probs=21.1
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 10 NVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 10 ~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+-.+....-+.|+|++.+++..++++.+|
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~~~p 44 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVKRDP 44 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34456666777888888888888777777
No 50
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=24.77 E-value=1.3e+02 Score=18.68 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=28.8
Q ss_pred CCChHHHHHHHHhHHHhcCHHHHHHHHHHHHhh
Q 045389 4 PSPREENVYMAKLAEQAEWYEKMVQYMEKVIVS 36 (136)
Q Consensus 4 ~~~re~~v~~AklaeqaeRy~dMv~~mk~~v~~ 36 (136)
+.+=+++..+++.+-+-+.|+..+..++..+..
T Consensus 2 ~Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~ 34 (104)
T 2v5f_A 2 FLTAEDCFELGKVAYTEADYYHTELWMEQALRQ 34 (104)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHccchHHHHHHHHHHHHh
Confidence 344579999999999999999999999998765
No 51
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=24.39 E-value=1.3e+02 Score=21.03 Aligned_cols=31 Identities=6% Similarity=0.112 Sum_probs=27.5
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+-+..++.+..+.|+|++.+...+++++.+|
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P 70 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTP 70 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4567788999999999999999999999877
No 52
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=24.33 E-value=1e+02 Score=19.71 Aligned_cols=27 Identities=19% Similarity=0.099 Sum_probs=21.4
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHh
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIV 35 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~ 35 (136)
+++..|=-.+++|+|++.+.+.+..++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 466677778889999999998877765
No 53
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=24.24 E-value=95 Score=19.70 Aligned_cols=31 Identities=0% Similarity=0.056 Sum_probs=23.7
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.-+..+|.+....|+|++.+.++++++...+
T Consensus 111 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 111 NVRFRLGVALDNLGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc
Confidence 3456677788888888888888888877755
No 54
>1eex_G Propanediol dehydratase; coenzyme B12, potassium ION, TIM barrel, lyase; HET: COY; 1.70A {Klebsiella oxytoca} SCOP: a.23.2.1 PDB: 1dio_G* 1egm_G* 1egv_G* 1iwb_G* 1uc4_G* 1uc5_G* 3auj_G*
Probab=23.68 E-value=2.1e+02 Score=21.30 Aligned_cols=39 Identities=15% Similarity=0.137 Sum_probs=32.1
Q ss_pred ChHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCCCCCCccc
Q 045389 6 PREENVYMAKLAEQAEWYEKMVQYMEKVIVSASTSEEPPL 45 (136)
Q Consensus 6 ~re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~s~EERnL 45 (136)
..+-|.+.|.+|+.+||.. +..-....+++-.-+++|-|
T Consensus 82 tpetL~~QaqIAe~~gr~~-~a~NfrRAAELt~VPD~riL 120 (173)
T 1eex_G 82 TPETLRLQASIAKDAGRDR-LAMNFERAAELTAVPDDRIL 120 (173)
T ss_dssp CHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHTTSCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHH-HHHHHHHHHhcccCCHHHHH
Confidence 4688999999999999985 77777888887556777777
No 55
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=23.48 E-value=1.3e+02 Score=19.77 Aligned_cols=26 Identities=19% Similarity=0.132 Sum_probs=14.9
Q ss_pred HHHHHHHHhhcccCCcCCcchHHHHhhhcccccc
Q 045389 73 CSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLL 106 (136)
Q Consensus 73 C~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR 106 (136)
..++++++..++- +++-|+-| ||+-+
T Consensus 32 a~~~l~mA~~Y~~------Da~~fl~k--GD~v~ 57 (87)
T 2pmr_A 32 EEAVVERALNYRD------DSVYYLEK--GDHIT 57 (87)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHH------HHHHHHHc--CCHHH
Confidence 3566666665553 34444443 88765
No 56
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=22.94 E-value=1.3e+02 Score=21.01 Aligned_cols=31 Identities=13% Similarity=0.018 Sum_probs=25.1
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
+.+..+|...-+.|+|++.+...++++...|
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p 35 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYP 35 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3456678888888999999999988888776
No 57
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=22.48 E-value=1.1e+02 Score=20.71 Aligned_cols=24 Identities=21% Similarity=0.239 Sum_probs=11.5
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHh
Q 045389 12 YMAKLAEQAEWYEKMVQYMEKVIV 35 (136)
Q Consensus 12 ~~AklaeqaeRy~dMv~~mk~~v~ 35 (136)
.+|.+..+.|+|++.+.+..+++.
T Consensus 93 ~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 93 NLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Confidence 344444444555555555544443
No 58
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=21.77 E-value=1.6e+02 Score=18.50 Aligned_cols=30 Identities=10% Similarity=-0.097 Sum_probs=21.0
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+..+|.+..+.|+|++.+.+.++++..++
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 78 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELDK 78 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 345566677777777777777777776666
No 59
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=21.41 E-value=51 Score=21.80 Aligned_cols=42 Identities=29% Similarity=0.497 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHhhcccCCcCCcchHHHHhhhcccccc
Q 045389 57 RLLEYRLKIEAELTEI--CSGILKLLDQKLVPTAAAADSKVFYLKMKGDYLL 106 (136)
Q Consensus 57 ~i~~yr~kie~EL~~i--C~dil~lid~~Lip~~~~~eskVFy~KmKGDYyR 106 (136)
.+..|...+++-|..+ +.++++++..++- +++-|+-| ||+-+
T Consensus 10 ki~kYi~~l~eaL~~i~~a~~~l~mA~~Y~~------Da~~fl~k--GD~v~ 53 (86)
T 2oo2_A 10 ETLKWLERIEERVKEIEGDEGFMRNIEAYIS------DSRYFLEK--GDLVR 53 (86)
T ss_dssp HHHHHHHHHHHHGGGEEECHHHHHHHHHHHH------HHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH------HHHHHHHc--CCHHH
Confidence 3444444444444433 5777777776653 34444443 88765
No 60
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=21.10 E-value=99 Score=21.43 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=28.4
Q ss_pred hHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 7 REENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 7 re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+.++..+...-+.|+|++.+.+..+++..+|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI 35 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 35778889999999999999999999998876
No 61
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=20.77 E-value=1.7e+02 Score=20.62 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=22.7
Q ss_pred hHHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 7 REENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 7 re~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
-+.+...|...-+.|+|++.+...++++...|
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p 46 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGR 46 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCS
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC
Confidence 35566777777777777777777777776655
No 62
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=20.58 E-value=1.4e+02 Score=17.41 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=25.5
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhCC
Q 045389 8 EENVYMAKLAEQAEWYEKMVQYMEKVIVSAS 38 (136)
Q Consensus 8 e~~v~~AklaeqaeRy~dMv~~mk~~v~~~~ 38 (136)
.-+..+|.+....|+|++.+.+.++++..++
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 74 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDP 74 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC
Confidence 3456778888888999999999998888776
No 63
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=20.31 E-value=1.4e+02 Score=18.92 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=21.8
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHh
Q 045389 9 ENVYMAKLAEQAEWYEKMVQYMEKVIV 35 (136)
Q Consensus 9 ~~v~~AklaeqaeRy~dMv~~mk~~v~ 35 (136)
+++..|=-.+++|+|++.+.+.+..++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 467777778899999999998877765
Done!