Query         045393
Match_columns 580
No_of_seqs    608 out of 3657
Neff          10.2
Searched_HMMs 46136
Date          Fri Mar 29 12:48:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045393.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045393hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02876 ankyrin repeat protei 100.0 1.5E-46 3.2E-51  409.2  35.2  361    1-399     1-470 (682)
  2 PHA02946 ankyin-like protein;  100.0 9.7E-46 2.1E-50  377.9  35.5  337    4-394    12-377 (446)
  3 KOG0510 Ankyrin repeat protein 100.0 1.3E-45 2.8E-50  369.0  35.2  335    3-371    63-416 (929)
  4 PHA02876 ankyrin repeat protei 100.0 3.2E-45 6.9E-50  398.8  38.2  350    3-399   147-501 (682)
  5 PHA02946 ankyin-like protein;  100.0 1.9E-44 4.2E-49  368.4  32.3  309    4-351    40-377 (446)
  6 PHA02874 ankyrin repeat protei 100.0 3.7E-42 7.9E-47  355.2  36.0  316    1-360     1-319 (434)
  7 KOG0510 Ankyrin repeat protein 100.0   4E-43 8.7E-48  351.3  25.8  350    7-399    33-404 (929)
  8 PHA02716 CPXV016; CPX019; EVM0 100.0 2.5E-42 5.4E-47  362.1  31.9  357   10-401   151-569 (764)
  9 PHA02874 ankyrin repeat protei 100.0 6.2E-42 1.3E-46  353.5  33.0  310   36-396     3-313 (434)
 10 PHA02730 ankyrin-like protein; 100.0 2.7E-41 5.8E-46  347.4  34.2  367    3-399    43-525 (672)
 11 PHA02730 ankyrin-like protein; 100.0 9.3E-41   2E-45  343.4  32.4  352   14-400    20-490 (672)
 12 PHA03095 ankyrin-like protein; 100.0 1.6E-40 3.4E-45  348.5  28.3  282    7-316    20-313 (471)
 13 PHA03095 ankyrin-like protein; 100.0 4.8E-40   1E-44  344.9  31.8  291   39-361    19-321 (471)
 14 PHA02917 ankyrin-like protein; 100.0 1.9E-39 4.2E-44  343.6  34.6  359    3-400    34-514 (661)
 15 PHA02716 CPXV016; CPX019; EVM0 100.0 5.8E-39 1.3E-43  336.8  33.7  349    3-399   179-594 (764)
 16 PHA02917 ankyrin-like protein; 100.0 5.7E-39 1.2E-43  340.0  32.6  349   14-400    12-480 (661)
 17 KOG4177 Ankyrin [Cell wall/mem 100.0 9.2E-41   2E-45  355.9  18.9  366    4-397   245-631 (1143)
 18 PHA03100 ankyrin repeat protei 100.0 1.8E-39 3.9E-44  341.2  27.6  286   11-361    12-314 (480)
 19 PHA02878 ankyrin repeat protei 100.0   2E-38 4.4E-43  331.2  29.3  328    4-369     3-343 (477)
 20 PHA02878 ankyrin repeat protei 100.0 9.9E-38 2.1E-42  326.0  32.8  274   70-374    31-309 (477)
 21 KOG4177 Ankyrin [Cell wall/mem 100.0 7.8E-40 1.7E-44  348.8  15.3  369    3-399   211-600 (1143)
 22 PHA03100 ankyrin repeat protei 100.0 6.6E-38 1.4E-42  329.4  27.5  282   45-400    13-311 (480)
 23 PHA02989 ankyrin repeat protei 100.0 7.5E-36 1.6E-40  312.7  30.0  276   10-314    12-310 (494)
 24 PHA02989 ankyrin repeat protei 100.0 1.6E-35 3.4E-40  310.2  30.6  275   44-351    13-311 (494)
 25 PHA02791 ankyrin-like protein; 100.0 3.4E-35 7.4E-40  279.3  25.4  232   86-351     9-242 (284)
 26 PHA02791 ankyrin-like protein; 100.0 3.3E-35 7.2E-40  279.4  25.3  231   12-315    10-242 (284)
 27 PHA02875 ankyrin repeat protei 100.0 1.4E-34   3E-39  297.6  30.6  245  122-375     2-248 (413)
 28 PHA02875 ankyrin repeat protei 100.0 1.1E-34 2.3E-39  298.4  28.8  256   76-349     2-261 (413)
 29 KOG0508 Ankyrin repeat protein 100.0 5.4E-35 1.2E-39  275.6  21.6  223    5-246     8-236 (615)
 30 KOG4412 26S proteasome regulat 100.0 1.7E-35 3.7E-40  244.4  15.5  208  158-374     5-213 (226)
 31 PHA02798 ankyrin-like protein; 100.0 1.2E-33 2.6E-38  295.6  27.2  296    4-359     5-320 (489)
 32 KOG4412 26S proteasome regulat 100.0   2E-34 4.2E-39  238.1  15.0  211  121-338     2-213 (226)
 33 PHA02792 ankyrin-like protein; 100.0 9.5E-33 2.1E-37  281.2  29.6  362    2-398     4-479 (631)
 34 PHA02798 ankyrin-like protein; 100.0 4.1E-33 8.8E-38  291.6  27.3  263   46-374    17-300 (489)
 35 PHA02792 ankyrin-like protein; 100.0 1.4E-31 3.1E-36  272.7  24.0  309   29-356    66-479 (631)
 36 KOG0508 Ankyrin repeat protein 100.0 5.2E-31 1.1E-35  248.8  20.7  184    3-212    44-236 (615)
 37 KOG0509 Ankyrin repeat and DHH 100.0 2.8E-30   6E-35  254.9  24.5  205  160-374    48-254 (600)
 38 KOG0509 Ankyrin repeat and DHH 100.0 2.1E-29 4.5E-34  248.8  17.8  206    5-235    48-255 (600)
 39 KOG4369 RTK signaling protein  100.0 2.4E-28 5.1E-33  250.6  11.2  315   30-374   753-1069(2131)
 40 KOG4369 RTK signaling protein  100.0 2.6E-28 5.7E-33  250.3  11.4  323    2-351   758-1082(2131)
 41 PHA02859 ankyrin repeat protei  99.9 7.8E-27 1.7E-31  214.5  18.6  173  190-374    20-201 (209)
 42 PHA02795 ankyrin-like protein;  99.9 1.1E-25 2.5E-30  221.7  20.1  211   49-315    64-284 (437)
 43 PHA02859 ankyrin repeat protei  99.9 2.4E-25 5.3E-30  204.6  19.0  177  119-340    18-203 (209)
 44 TIGR00870 trp transient-recept  99.9 5.4E-24 1.2E-28  234.1  31.7  256   74-374    15-299 (743)
 45 KOG0502 Integral membrane anky  99.9 2.1E-26 4.5E-31  196.6   7.7  239  118-370    58-296 (296)
 46 PHA02795 ankyrin-like protein;  99.9   1E-24 2.2E-29  215.0  20.3  237   18-315    66-312 (437)
 47 KOG0507 CASK-interacting adapt  99.9 2.1E-25 4.4E-30  223.0  15.5  260    1-314     3-278 (854)
 48 PF13962 PGG:  Domain of unknow  99.9 2.2E-24 4.7E-29  176.1   9.0  111  416-528     1-113 (113)
 49 KOG0502 Integral membrane anky  99.9 3.2E-24   7E-29  183.2   9.8  265   35-334    32-296 (296)
 50 TIGR00870 trp transient-recept  99.9 3.1E-23 6.7E-28  228.2  18.4  255   32-338    15-299 (743)
 51 PLN03192 Voltage-dependent pot  99.9 1.4E-22 3.1E-27  223.9  20.8  174  190-374   524-698 (823)
 52 KOG0507 CASK-interacting adapt  99.9 5.5E-23 1.2E-27  205.8  14.6  250   78-338     5-263 (854)
 53 PLN03192 Voltage-dependent pot  99.9 3.2E-21   7E-26  213.2  21.2  193  135-340   507-700 (823)
 54 KOG0505 Myosin phosphatase, re  99.9 7.7E-22 1.7E-26  191.2  12.2  229   36-302    42-273 (527)
 55 KOG0514 Ankyrin repeat protein  99.9   2E-21 4.2E-26  178.7  10.1  150  218-374   261-416 (452)
 56 KOG0512 Fetal globin-inducing   99.8 1.2E-20 2.7E-25  155.3  12.9  141  228-374    66-207 (228)
 57 KOG0514 Ankyrin repeat protein  99.8 4.5E-21 9.7E-26  176.3  10.2  162  184-350   262-428 (452)
 58 PHA02743 Viral ankyrin protein  99.8 1.6E-20 3.6E-25  166.0  13.4  141  218-366    13-162 (166)
 59 KOG3676 Ca2+-permeable cation   99.8 2.3E-19   5E-24  182.6  22.3  214  158-374   103-366 (782)
 60 KOG0505 Myosin phosphatase, re  99.8 1.5E-20 3.2E-25  182.3  12.9  228    4-269    43-274 (527)
 61 PHA02741 hypothetical protein;  99.8 6.9E-20 1.5E-24  162.9  13.8  131  254-397    16-157 (169)
 62 PHA02741 hypothetical protein;  99.8 1.8E-19 3.9E-24  160.3  13.8  130  218-351    14-154 (169)
 63 PHA02743 Viral ankyrin protein  99.8 1.1E-19 2.3E-24  160.8  11.7  139  248-400    10-156 (166)
 64 PHA02736 Viral ankyrin protein  99.8 2.3E-19   5E-24  157.4  10.2  134  218-357    10-153 (154)
 65 PHA02884 ankyrin repeat protei  99.8 2.2E-18 4.8E-23  164.0  16.0  156  218-396    25-186 (300)
 66 PHA02736 Viral ankyrin protein  99.8 5.7E-19 1.2E-23  154.9   9.4  132  253-398    11-152 (154)
 67 KOG0195 Integrin-linked kinase  99.8   3E-19 6.5E-24  159.1   6.3  134  234-374     9-142 (448)
 68 PHA02884 ankyrin repeat protei  99.8 6.9E-18 1.5E-22  160.6  15.8  149  190-351    32-184 (300)
 69 KOG0512 Fetal globin-inducing   99.8 1.3E-17 2.8E-22  137.6  13.3  144   37-203    66-210 (228)
 70 KOG0195 Integrin-linked kinase  99.7 3.9E-18 8.4E-23  152.1   5.7  137    4-163     3-140 (448)
 71 KOG3676 Ca2+-permeable cation   99.7 1.7E-15 3.7E-20  154.7  24.9  188  193-394   103-330 (782)
 72 PF12796 Ank_2:  Ankyrin repeat  99.7 2.7E-16 5.8E-21  123.9   9.3   89  263-360     1-89  (89)
 73 cd00204 ANK ankyrin repeats;    99.7   2E-15 4.4E-20  127.5  13.7  124  221-349     3-126 (126)
 74 PF12796 Ank_2:  Ankyrin repeat  99.7   1E-15 2.2E-20  120.6  10.6   86   38-149     1-86  (89)
 75 cd00204 ANK ankyrin repeats;    99.6 7.5E-15 1.6E-19  124.0  14.2  124   30-176     3-126 (126)
 76 KOG4214 Myotrophin and similar  99.5 3.7E-14 8.1E-19  104.4   8.1   93    2-104     3-95  (117)
 77 COG0666 Arp FOG: Ankyrin repea  99.5 5.6E-13 1.2E-17  125.6  16.3  130  218-351    66-202 (235)
 78 KOG4214 Myotrophin and similar  99.5 1.2E-13 2.6E-18  101.8   8.3  105  262-374     5-109 (117)
 79 COG0666 Arp FOG: Ankyrin repea  99.4 6.3E-12 1.4E-16  118.4  17.0  125  190-316    72-203 (235)
 80 KOG1710 MYND Zn-finger and ank  99.4 3.8E-12 8.2E-17  114.2  10.9  124  190-315    11-134 (396)
 81 PF13637 Ank_4:  Ankyrin repeat  99.4   2E-12 4.2E-17   90.6   6.5   54   34-96      1-54  (54)
 82 KOG0515 p53-interacting protei  99.3 2.8E-12   6E-17  124.1   9.2  120    4-144   553-674 (752)
 83 PF13857 Ank_5:  Ankyrin repeat  99.3 5.8E-13 1.3E-17   93.6   3.3   50  320-372     7-56  (56)
 84 KOG1710 MYND Zn-finger and ank  99.3 6.9E-12 1.5E-16  112.5  10.6  120    3-143    14-133 (396)
 85 PF13857 Ank_5:  Ankyrin repeat  99.3 1.1E-12 2.3E-17   92.3   4.1   56  278-336     1-56  (56)
 86 PF13637 Ank_4:  Ankyrin repeat  99.3 3.7E-12   8E-17   89.2   6.4   53  293-348     1-53  (54)
 87 KOG0515 p53-interacting protei  99.3 4.8E-12   1E-16  122.5   9.3  120   37-178   553-674 (752)
 88 PTZ00322 6-phosphofructo-2-kin  99.3 5.1E-12 1.1E-16  136.1  10.3  109  227-337    84-196 (664)
 89 PTZ00322 6-phosphofructo-2-kin  99.3 1.9E-11 4.2E-16  131.6  10.6  106  193-301    84-196 (664)
 90 KOG0782 Predicted diacylglycer  99.1 6.9E-10 1.5E-14  108.5   9.6  123    2-144   867-989 (1004)
 91 KOG0782 Predicted diacylglycer  98.7 4.1E-08 8.8E-13   96.4   9.3  121   38-179   870-990 (1004)
 92 KOG0783 Uncharacterized conser  98.7 1.4E-08 3.1E-13  104.0   3.8   95  241-339    34-129 (1267)
 93 KOG0783 Uncharacterized conser  98.6 1.9E-08 4.1E-13  103.1   3.9   95  209-304    36-130 (1267)
 94 PF13606 Ank_3:  Ankyrin repeat  98.6 7.6E-08 1.7E-12   57.3   3.5   29   75-103     1-29  (30)
 95 KOG0818 GTPase-activating prot  98.5   4E-07 8.6E-12   88.3   8.9   94  220-314   122-221 (669)
 96 PF13606 Ank_3:  Ankyrin repeat  98.5 1.6E-07 3.4E-12   55.9   3.8   29  121-149     1-29  (30)
 97 PF00023 Ank:  Ankyrin repeat H  98.5 1.3E-07 2.7E-12   58.2   3.4   32  328-360     1-32  (33)
 98 KOG0506 Glutaminase (contains   98.5 1.5E-07 3.3E-12   90.8   5.3   92  256-350   503-594 (622)
 99 KOG0506 Glutaminase (contains   98.5 1.9E-07   4E-12   90.2   5.2   89    4-100   509-597 (622)
100 KOG0818 GTPase-activating prot  98.4 6.3E-07 1.4E-11   87.0   8.0   93  254-349   122-220 (669)
101 KOG0522 Ankyrin repeat protein  98.3 1.5E-06 3.3E-11   85.6   7.9   91   36-146    22-112 (560)
102 PF00023 Ank:  Ankyrin repeat H  98.3 8.8E-07 1.9E-11   54.4   4.1   26  259-284     2-27  (33)
103 KOG0705 GTPase-activating prot  98.3 2.9E-06 6.2E-11   84.1   8.4   92    3-103   626-721 (749)
104 KOG0522 Ankyrin repeat protein  98.3 2.1E-06 4.5E-11   84.7   7.3   89    3-100    22-112 (560)
105 KOG0705 GTPase-activating prot  98.2 2.5E-06 5.4E-11   84.5   7.6   86  230-316   629-717 (749)
106 KOG3609 Receptor-activated Ca2  98.2 8.2E-06 1.8E-10   85.4   9.7  127    4-149    28-158 (822)
107 KOG3609 Receptor-activated Ca2  98.1 2.5E-05 5.5E-10   81.8  12.4  125   34-183    25-158 (822)
108 KOG0511 Ankyrin repeat protein  97.9 2.4E-05 5.2E-10   73.8   6.5   57    3-59     38-94  (516)
109 KOG2384 Major histocompatibili  97.8   5E-05 1.1E-09   65.0   6.5   69   68-149     4-73  (223)
110 KOG0511 Ankyrin repeat protein  97.8 3.4E-05 7.3E-10   72.9   5.6   58   35-101    37-94  (516)
111 KOG0520 Uncharacterized conser  97.8 1.8E-05   4E-10   84.7   4.2  128  219-348   568-699 (975)
112 KOG0521 Putative GTPase activa  97.7 2.9E-05 6.4E-10   83.8   5.1   79  291-375   654-732 (785)
113 KOG2384 Major histocompatibili  97.6 0.00016 3.6E-09   61.9   6.1   68  217-284     4-71  (223)
114 KOG0521 Putative GTPase activa  97.6 6.1E-05 1.3E-09   81.4   4.4   88  257-348   654-741 (785)
115 KOG0520 Uncharacterized conser  97.5 0.00017 3.8E-09   77.5   6.8  129  186-315   569-702 (975)
116 smart00248 ANK ankyrin repeats  96.2  0.0075 1.6E-07   34.7   3.5   28   75-102     1-28  (30)
117 KOG2505 Ankyrin repeat protein  96.2  0.0044 9.4E-08   61.3   3.6   66  306-374   404-472 (591)
118 smart00248 ANK ankyrin repeats  96.2  0.0095 2.1E-07   34.3   3.8   28  121-148     1-28  (30)
119 PF03158 DUF249:  Multigene fam  95.9    0.14 3.1E-06   44.3  10.9   46  262-314   146-191 (192)
120 KOG2505 Ankyrin repeat protein  95.2   0.026 5.6E-07   56.0   4.9   26   77-102   431-456 (591)
121 PF06128 Shigella_OspC:  Shigel  95.1   0.094   2E-06   46.8   7.5  117    4-147   156-279 (284)
122 PF06128 Shigella_OspC:  Shigel  94.9    0.17 3.7E-06   45.2   8.6   46  238-283   230-278 (284)
123 PF03158 DUF249:  Multigene fam  94.6    0.39 8.4E-06   41.7   9.5  139  123-280    47-191 (192)
124 PF11929 DUF3447:  Domain of un  90.2    0.81 1.8E-05   34.1   5.3   48  124-179     8-55  (76)
125 cd07920 Pumilio Pumilio-family  89.9      12 0.00026   36.9  15.0  130   30-175    17-148 (322)
126 PF11929 DUF3447:  Domain of un  89.1    0.71 1.5E-05   34.4   4.3   48   35-98      7-54  (76)
127 cd07920 Pumilio Pumilio-family  88.7      15 0.00033   36.1  14.9  253  118-374    17-288 (322)
128 PF08006 DUF1700:  Protein of u  64.5   1E+02  0.0022   27.3  14.1    9  569-577   172-180 (181)
129 KOG4349 Uncharacterized conser  57.6      64  0.0014   26.0   6.9   20  466-485    47-66  (143)
130 KOG0569 Permease of the major   54.1 1.7E+02  0.0036   30.8  11.5   34  535-568   365-398 (485)
131 PF11023 DUF2614:  Protein of u  52.7      56  0.0012   26.1   5.9   34  504-543    13-46  (114)
132 PF04053 Coatomer_WDAD:  Coatom  48.6      31 0.00066   35.7   5.2  130   38-212   268-397 (443)
133 PRK02935 hypothetical protein;  48.3   1E+02  0.0022   24.3   6.5   17  504-520    14-30  (110)
134 KOG4591 Uncharacterized conser  45.1      13 0.00029   32.7   1.6   50  290-339   219-270 (280)
135 PF10966 DUF2768:  Protein of u  43.7      17 0.00037   25.1   1.6   22  510-531     2-23  (58)
136 PF14126 DUF4293:  Domain of un  42.2 2.2E+02  0.0048   24.4  10.2   13  540-552   115-127 (149)
137 PLN03081 pentatricopeptide (PP  42.0 5.3E+02   0.011   28.7  14.9  262    5-295   297-566 (697)
138 PLN03218 maturation of RBCL 1;  38.0 2.1E+02  0.0045   33.6  10.2   20  193-212   619-638 (1060)
139 PF04053 Coatomer_WDAD:  Coatom  37.7      51  0.0011   34.1   4.8  160  126-315   268-428 (443)
140 PF10777 YlaC:  Inner membrane   34.6 1.3E+02  0.0028   25.5   5.6   23  506-531    34-56  (155)
141 PF12304 BCLP:  Beta-casein lik  30.8 2.2E+02  0.0048   25.1   6.7   32  467-498    38-69  (188)
142 PLN03218 maturation of RBCL 1;  29.7 2.1E+02  0.0045   33.6   8.5   50    5-54    479-530 (1060)
143 COG4858 Uncharacterized membra  29.7   4E+02  0.0087   23.6  12.5   20  432-451    66-85  (226)
144 PF11026 DUF2721:  Protein of u  29.4 2.3E+02   0.005   23.5   6.6   21  472-492    68-88  (130)
145 PF12273 RCR:  Chitin synthesis  27.7      49  0.0011   27.6   2.3   10  534-543     2-11  (130)
146 KOG0513 Ca2+-independent phosp  27.0      23  0.0005   37.0   0.3   48  292-342   135-182 (503)
147 COG4298 Uncharacterized protei  26.7   2E+02  0.0044   21.6   4.9   48  468-530    15-63  (95)
148 PF04304 DUF454:  Protein of un  26.2 1.5E+02  0.0033   21.4   4.5   22  510-531    29-50  (71)
149 KOG3788 Predicted divalent cat  24.5 6.8E+02   0.015   25.4   9.5   24  475-498   155-178 (441)
150 KOG3462 Predicted membrane pro  24.4 3.3E+02  0.0072   20.9   7.1   15  472-486    36-50  (105)
151 TIGR01569 A_tha_TIGR01569 plan  23.8 4.7E+02    0.01   22.5  12.7   36  458-493    36-71  (154)
152 PHA03239 envelope glycoprotein  21.2 9.1E+02    0.02   24.8  10.5  131  446-576    80-223 (429)
153 KOG0513 Ca2+-independent phosp  20.9      24 0.00052   36.9  -0.9   30   69-98     48-77  (503)
154 PF02990 EMP70:  Endomembrane p  20.8 7.1E+02   0.015   26.5  10.0   27  509-535   303-330 (521)
155 PF05313 Pox_P21:  Poxvirus P21  20.7 3.2E+02   0.007   24.0   5.8   11  516-526    97-107 (189)
156 KOG4591 Uncharacterized conser  20.7      59  0.0013   28.9   1.5   47  325-374   218-269 (280)

No 1  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.5e-46  Score=409.24  Aligned_cols=361  Identities=21%  Similarity=0.223  Sum_probs=301.3

Q ss_pred             CCH-HHHHHHHcCCHHHHHHHhhhc------CcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhccccc
Q 045393            1 MDQ-ELLEVLRHGDEYKIKQLALRQ------DIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKN   73 (580)
Q Consensus         1 m~~-~L~~A~~~g~~~~~~~ll~~~------~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~   73 (580)
                      ||| .|+.++..|+.+-+..++.+.      ......+..+.||||.|+..|+.|+|+.|++.+++        .+...|
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~--------~~~~~~   72 (682)
T PHA02876          1 MCPDDLYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPE--------LIYITD   72 (682)
T ss_pred             CChHHHHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcc--------cchhhc
Confidence            665 899999999986655555442      22233467789999999999999999999999987        567788


Q ss_pred             CCCCcHHHHHH---------------------------------------------------------------------
Q 045393           74 LMDETALHIAA---------------------------------------------------------------------   84 (580)
Q Consensus        74 ~~g~tpLh~Aa---------------------------------------------------------------------   84 (580)
                      ..|.||||+|+                                                                     
T Consensus        73 ~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~  152 (682)
T PHA02876         73 HKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKER  152 (682)
T ss_pred             hhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHH
Confidence            88999999666                                                                     


Q ss_pred             -HhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHH
Q 045393           85 -RIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIA  163 (580)
Q Consensus        85 -~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A  163 (580)
                       ..|+.+++++|++.|++++             .+|..|.||||+|++.|+.++|++|+++|++.+ ..+..|.||||.|
T Consensus       153 i~~~~~~i~k~Ll~~Gadvn-------------~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n-~~~~~g~t~L~~A  218 (682)
T PHA02876        153 IQQDELLIAEMLLEGGADVN-------------AKDIYCITPIHYAAERGNAKMVNLLLSYGADVN-IIALDDLSVLECA  218 (682)
T ss_pred             HHCCcHHHHHHHHhCCCCCC-------------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-ccCCCCCCHHHHH
Confidence             4577888999999998876             478899999999999999999999999999887 5688899999999


Q ss_pred             HHcCcHHHHHHHHhcCCC----------------------------CcCCCCCCCCccHHHHHHHcCCH-HHHHHHHhhC
Q 045393          164 IDARLNDIACFIIDKSPE----------------------------SLNTTRLPDELTLIHFVVMRQNY-DIMVKILGTN  214 (580)
Q Consensus       164 ~~~~~~~~v~~Ll~~~~~----------------------------~~~~~~~~~~~t~L~~A~~~~~~-~~~~~Ll~~~  214 (580)
                      +..++.++++.|++.+..                            +.+..+. .|.||||.|+..++. ++++.|++.+
T Consensus       219 ~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~-~g~TpLh~Aa~~~~~~~iv~lLl~~g  297 (682)
T PHA02876        219 VDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDD-CKNTPLHHASQAPSLSRLVPKLLERG  297 (682)
T ss_pred             HHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHhCCCHHHHHHHHHHCC
Confidence            999999999888876542                            2233333 789999999999987 4677777766


Q ss_pred             CccccccCCCCChHHHHHHHcC-ChHHHHHHHHhchhcccccCCCCCcHHHHHHHc-CcHHHHHHHHHhCCCccccccCC
Q 045393          215 KELIDRLDWHQRNPLHYAAASG-NVKMAQRLLEESKRLAYKRDCNGETPLHLAAEN-GKLKVLKLLINKYPDAIEIRNNS  292 (580)
Q Consensus       215 ~~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~d~~  292 (580)
                      .+ ++..|..|.||||+|+..| +.++++.|++.|+++ +..|..|.||||+|+.. ++.++++.|++.|++ ++.+|..
T Consensus       298 ad-in~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi-n~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gad-in~~d~~  374 (682)
T PHA02876        298 AD-VNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADV-NAADRLYITPLHQASTLDRNKDIVITLLELGAN-VNARDYC  374 (682)
T ss_pred             CC-CCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCC-CCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCC-CccCCCC
Confidence            54 8889999999999999999 589999999999887 67888999999999985 578899999999999 8999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCCh-hHHHHhhcCcccccccccccCCCCCHHHH
Q 045393          293 DRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHS-DVVFTLSRHKSVNIRAKNHSARSNTALEI  371 (580)
Q Consensus       293 g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~-~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~  371 (580)
                      |+||||+|+..|+.+++++|++.|   ++++..+..|.||||+|+..++. .+++.|++ .|+++|.+|.  .|+|||++
T Consensus       375 G~TpLh~Aa~~~~~~iv~~Ll~~g---ad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~-~gadin~~d~--~G~TpLh~  448 (682)
T PHA02876        375 DKTPIHYAAVRNNVVIINTLLDYG---ADIEALSQKIGTALHFALCGTNPYMSVKTLID-RGANVNSKNK--DLSTPLHY  448 (682)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCC---CCccccCCCCCchHHHHHHcCCHHHHHHHHHh-CCCCCCcCCC--CCChHHHH
Confidence            999999999999999999999984   44888889999999999887664 55777775 4899999999  99999999


Q ss_pred             HHHHhhCChhhHHHHHHHHHHHhhhhhh
Q 045393          372 AEITRANGKEIQKHLTLKALKTAYAKRA  399 (580)
Q Consensus       372 a~~~~~~~~~~~~~~~~~~L~~~ga~~~  399 (580)
                      |+..      ....++++.|++.|++..
T Consensus       449 Aa~~------~~~~~iv~lLl~~Gad~n  470 (682)
T PHA02876        449 ACKK------NCKLDVIEMLLDNGADVN  470 (682)
T ss_pred             HHHh------CCcHHHHHHHHHCCCCCC
Confidence            9861      124578889999888754


No 2  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=9.7e-46  Score=377.94  Aligned_cols=337  Identities=17%  Similarity=0.170  Sum_probs=282.8

Q ss_pred             HHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHh--cCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVR--FRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALH   81 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh   81 (580)
                      +++.++..++.+.++.++...     ....+.++||.++.  .++.++|++|+++|++         ++.+|..|.||||
T Consensus        12 sl~~~~~~~n~~~~~~~l~~~-----~~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gad---------vn~~d~~G~TpLh   77 (446)
T PHA02946         12 SLYAKYNSKNLDVFRNMLQAI-----EPSGNYHILHAYCGIKGLDERFVEELLHRGYS---------PNETDDDGNYPLH   77 (446)
T ss_pred             HHHHHHccCcHHHHHHHHhcc-----CCCCCChHHHHHHHhcCCCHHHHHHHHHCcCC---------CCccCCCCCCHHH
Confidence            468888999999999998742     12234789998764  4578999999999998         8899999999999


Q ss_pred             HHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcC--cHHHHHHHHHcCCCCCcccccCCCCH
Q 045393           82 IAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQ--HKRVIRILVEKDSVPSSYINKAYQTP  159 (580)
Q Consensus        82 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~g~tp  159 (580)
                      +|+..|+.+++++|+++|++++             .+|.+|.||||+|+..+  ..+++++|+++|++++...+..|.||
T Consensus        78 ~Aa~~g~~eiv~lLL~~GAdin-------------~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tp  144 (446)
T PHA02946         78 IASKINNNRIVAMLLTHGADPN-------------ACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGP  144 (446)
T ss_pred             HHHHcCCHHHHHHHHHCcCCCC-------------CCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcH
Confidence            9999999999999999999876             47889999999998765  48899999999999886678899999


Q ss_pred             HHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCC--HHHHHHHHhhCCccccccCCCCChHHHHHHHcC-
Q 045393          160 LSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQN--YDIMVKILGTNKELIDRLDWHQRNPLHYAAASG-  236 (580)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~--~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g-  236 (580)
                      |+ |+..++.+++++|++.+. +.+..+. .|.||||.|+..++  .+++++|++.+.+ ++.+|.+|.||||+|+..+ 
T Consensus       145 L~-aa~~~~~~vv~~Ll~~ga-d~~~~d~-~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gad-in~~d~~G~TpLH~Aa~~~~  220 (446)
T PHA02946        145 LL-ACTDPSERVFKKIMSIGF-EARIVDK-FGKNHIHRHLMSDNPKASTISWMMKLGIS-PSKPDHDGNTPLHIVCSKTV  220 (446)
T ss_pred             HH-HHHCCChHHHHHHHhccc-cccccCC-CCCCHHHHHHHhcCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCC
Confidence            97 666789999999999884 5555665 89999999887654  6889999988766 8889999999999999886 


Q ss_pred             -ChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCc-HHHHHHHHHhCCCc-------------------cccc-cCCCC
Q 045393          237 -NVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGK-LKVLKLLINKYPDA-------------------IEIR-NNSDR  294 (580)
Q Consensus       237 -~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~-~~~v~~Ll~~~~~~-------------------~~~~-d~~g~  294 (580)
                       +.++++.|++ ++++ +.+|..|.||||+|+..++ .+++++|++++.+.                   ++.. +..|+
T Consensus       221 ~~~~iv~lLl~-gadi-n~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~  298 (446)
T PHA02946        221 KNVDIINLLLP-STDV-NKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDS  298 (446)
T ss_pred             CcHHHHHHHHc-CCCC-CCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCC
Confidence             7889998885 7776 7889999999999999988 58999999887641                   1111 23578


Q ss_pred             CHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          295 SILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       295 t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      ||||+|+.+|+.+++++|++++          .+|.||||+|+..++.++++.|+.+ |+++|.+ .  .|.||+++|..
T Consensus       299 TpLh~Aa~~g~~eivk~Ll~~~----------~~~~t~L~~A~~~~~~~~v~~Ll~~-ga~~n~~-~--~G~t~l~~a~~  364 (446)
T PHA02946        299 TDFKMAVEVGSIRCVKYLLDND----------IICEDAMYYAVLSEYETMVDYLLFN-HFSVDSV-V--NGHTCMSECVR  364 (446)
T ss_pred             CHHHHHHHcCCHHHHHHHHHCC----------CccccHHHHHHHhCHHHHHHHHHHC-CCCCCCc-c--ccccHHHHHHH
Confidence            9999999999999999999874          2579999999999999999999965 8999985 5  89999999998


Q ss_pred             HhhCChhhHHHHHHHHHHHh
Q 045393          375 TRANGKEIQKHLTLKALKTA  394 (580)
Q Consensus       375 ~~~~~~~~~~~~~~~~L~~~  394 (580)
                             .+..++++.|++.
T Consensus       365 -------~~~~~~~~~ll~~  377 (446)
T PHA02946        365 -------LNNPVILSKLMLH  377 (446)
T ss_pred             -------cCCHHHHHHHHhc
Confidence                   5566777777763


No 3  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=1.3e-45  Score=369.02  Aligned_cols=335  Identities=24%  Similarity=0.325  Sum_probs=293.9

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393            3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI   82 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~   82 (580)
                      .+++.++.+|..      +++-.+....|..+++|||+|+.....+.+++|++.|++         ..-+|..+.+|+|+
T Consensus        63 ~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad---------~~~~n~~~~aplh~  127 (929)
T KOG0510|consen   63 TELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGAD---------TPLRNLNKNAPLHL  127 (929)
T ss_pred             hHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCC---------CChhhhhccCchhh
Confidence            455555555544      222233345788899999999999999999999999998         78889999999999


Q ss_pred             HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHH
Q 045393           83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSI  162 (580)
Q Consensus        83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~  162 (580)
                      |+..|+.+..+.|+++|.+++             ..|+.|.||||.||..++.|..+.|++.|+++. ..|..|..|+|.
T Consensus       128 A~~~~~~s~L~~Ll~~~~dvn-------------l~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~-K~~~~~~~~iH~  193 (929)
T KOG0510|consen  128 AADSGNYSCLKLLLDYGADVN-------------LEDENGFTPLHLAARKNKVEAKKELINKGADPC-KSDIDGNFPIHE  193 (929)
T ss_pred             ccccchHHHHHHHHHhcCCcc-------------ccccCCCchhhHHHhcChHHHHHHHHhcCCCCC-cccCcCCchHHH
Confidence            999999999999999998876             588999999999999999998899999999987 589999999999


Q ss_pred             HHHcCcHHHHHHHHhcCC----CCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCcc--------------ccccCCC
Q 045393          163 AIDARLNDIACFIIDKSP----ESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKEL--------------IDRLDWH  224 (580)
Q Consensus       163 A~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~--------------~~~~d~~  224 (580)
                      |+.+|..++.+..+.+.+    ..++..+. .+.+|||.|+..|+.++++.+++.+...              ++..|.+
T Consensus       194 aa~s~s~e~mEi~l~~~g~~r~~~in~~~n-~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~d  272 (929)
T KOG0510|consen  194 AARSGSKECMEIFLPEHGYERQTHINFDNN-EKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDND  272 (929)
T ss_pred             HHHhcchhhhhhhhccccchhhcccccccC-CCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhccccc
Confidence            999999999999998332    24445555 8999999999999999999999876532              4566899


Q ss_pred             CChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHH-hCCCccccccCCCCCHHHHHHHc
Q 045393          225 QRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLIN-KYPDAIEIRNNSDRSILHVAAKH  303 (580)
Q Consensus       225 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~  303 (580)
                      |.||||+|++.|++++++.|+..|++. +.++.++.||||.||++|+.+.++.|++ .+-...+..|..|.||||+|+++
T Consensus       273 g~tpLH~a~r~G~~~svd~Ll~~Ga~I-~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~  351 (929)
T KOG0510|consen  273 GCTPLHYAARQGGPESVDNLLGFGASI-NSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKS  351 (929)
T ss_pred             CCchHHHHHHcCChhHHHHHHHcCCcc-cccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhc
Confidence            999999999999999999999999998 7788999999999999999999999999 66666788899999999999999


Q ss_pred             CCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHH
Q 045393          304 GNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEI  371 (580)
Q Consensus       304 ~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~  371 (580)
                      |+.+++++|+++|+........|.+|+||||+|+..|+..+++.|+.+ |+++..+|.  .|.|++++
T Consensus       352 gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~-Ga~I~~~n~--~g~SA~~~  416 (929)
T KOG0510|consen  352 GHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISH-GADIGVKNK--KGKSAFDT  416 (929)
T ss_pred             CHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHc-CCceeeccc--cccccccc
Confidence            999999999999655311115699999999999999999999999976 999999999  99999995


No 4  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.2e-45  Score=398.82  Aligned_cols=350  Identities=19%  Similarity=0.190  Sum_probs=313.1

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393            3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI   82 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~   82 (580)
                      +.++.|++.|+.+++++|++.|...+..+..|.||||+|+..|+.++|++|+++|++         ++..+..|.||||+
T Consensus       147 ~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad---------~n~~~~~g~t~L~~  217 (682)
T PHA02876        147 KLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGAD---------VNIIALDDLSVLEC  217 (682)
T ss_pred             HHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC---------cCccCCCCCCHHHH
Confidence            457889999999999999999988888999999999999999999999999999998         78889999999999


Q ss_pred             HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHH
Q 045393           83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSI  162 (580)
Q Consensus        83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~  162 (580)
                      |+..|+.++++.|++.+.+.+                 .+.++|+.|+..++.+++++|++.|.+.+ ..+..|.||||+
T Consensus       218 A~~~~~~~ivk~Ll~~~~~~~-----------------~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn-~~d~~g~TpLh~  279 (682)
T PHA02876        218 AVDSKNIDTIKAIIDNRSNIN-----------------KNDLSLLKAIRNEDLETSLLLYDAGFSVN-SIDDCKNTPLHH  279 (682)
T ss_pred             HHHcCCHHHHHHHHhcCCCCC-----------------CCcHHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHH
Confidence            999999999999999876643                 35679999999999999999999999887 468889999999


Q ss_pred             HHHcCcH-HHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcC-CHHHHHHHHhhCCccccccCCCCChHHHHHHHc-CChH
Q 045393          163 AIDARLN-DIACFIIDKSPESLNTTRLPDELTLIHFVVMRQ-NYDIMVKILGTNKELIDRLDWHQRNPLHYAAAS-GNVK  239 (580)
Q Consensus       163 A~~~~~~-~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~-~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~-g~~~  239 (580)
                      |+..++. +++++|++.+. +++..+. .|.||||.|+..| +.+.++.|+..+.+ ++..|..|.||||+|+.. ++.+
T Consensus       280 Aa~~~~~~~iv~lLl~~ga-din~~d~-~g~TpLh~Aa~~g~~~~~v~~Ll~~gad-in~~d~~g~TpLh~A~~~~~~~~  356 (682)
T PHA02876        280 ASQAPSLSRLVPKLLERGA-DVNAKNI-KGETPLYLMAKNGYDTENIRTLIMLGAD-VNAADRLYITPLHQASTLDRNKD  356 (682)
T ss_pred             HHhCCCHHHHHHHHHHCCC-CCCCcCC-CCCCHHHHHHHhCCCHHHHHHHHHcCCC-CCCcccCCCcHHHHHHHhCCcHH
Confidence            9999986 68999999884 4555665 8999999999999 58889988888766 889999999999999986 4789


Q ss_pred             HHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCC-HHHHHHHhcCcch
Q 045393          240 MAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGN-WNIVSFILRSPEM  318 (580)
Q Consensus       240 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~-~~iv~~Ll~~~~~  318 (580)
                      +++.|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..++ ..++++|++.|  
T Consensus       357 iv~lLl~~gadi-n~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~g--  432 (682)
T PHA02876        357 IVITLLELGANV-NARDYCDKTPIHYAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHFALCGTNPYMSVKTLIDRG--  432 (682)
T ss_pred             HHHHHHHcCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHHHHHcCCHHHHHHHHHhCC--
Confidence            999999999988 78899999999999999999999999999999 88999999999999998766 56799999984  


Q ss_pred             hhhcccccCCCCcHHHHHHhcC-ChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhh
Q 045393          319 ENLINLVDRNGNTPLHLAAMGL-HSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAK  397 (580)
Q Consensus       319 ~~~~n~~d~~G~T~Lh~A~~~~-~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~  397 (580)
                       +++|.+|..|+||||+|+..+ +.+++++|++. |+|+|.+|.  .|.||+++|...         ..+++.|+..|++
T Consensus       433 -adin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~-Gad~n~~d~--~g~tpl~~a~~~---------~~~v~~Ll~~~a~  499 (682)
T PHA02876        433 -ANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDN-GADVNAINI--QNQYPLLIALEY---------HGIVNILLHYGAE  499 (682)
T ss_pred             -CCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHC-CCCCCCCCC--CCCCHHHHHHHh---------CCHHHHHHHCCCC
Confidence             559999999999999999976 68999999975 999999999  999999999861         2367778888877


Q ss_pred             hh
Q 045393          398 RA  399 (580)
Q Consensus       398 ~~  399 (580)
                      ..
T Consensus       500 ~~  501 (682)
T PHA02876        500 LR  501 (682)
T ss_pred             CC
Confidence            54


No 5  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=1.9e-44  Score=368.41  Aligned_cols=309  Identities=18%  Similarity=0.193  Sum_probs=267.3

Q ss_pred             HHHHHH--HcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHH
Q 045393            4 ELLEVL--RHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALH   81 (580)
Q Consensus         4 ~L~~A~--~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh   81 (580)
                      .||.++  ..++.++++.|++.|...+..+.+|.||||+|+..|+.++++.|+++|++         ++.+|..|.||||
T Consensus        40 ~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd---------in~~d~~g~TpLh  110 (446)
T PHA02946         40 ILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGAD---------PNACDKQHKTPLY  110 (446)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC---------CCCCCCCCCCHHH
Confidence            455544  55688999999999988888999999999999999999999999999998         8899999999999


Q ss_pred             HHHHhC--CHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCH
Q 045393           82 IAARIG--DRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTP  159 (580)
Q Consensus        82 ~Aa~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tp  159 (580)
                      +|+..+  ..++++.|+++|++++.            ..|.+|.|||| |+..++.+++++|++.|++.+ ..|..|+||
T Consensus       111 ~A~~~~~~~~e~v~lLl~~Gadin~------------~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~-~~d~~G~t~  176 (446)
T PHA02946        111 YLSGTDDEVIERINLLVQYGAKINN------------SVDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR-IVDKFGKNH  176 (446)
T ss_pred             HHHHcCCchHHHHHHHHHcCCCccc------------ccCCCCCcHHH-HHHCCChHHHHHHHhcccccc-ccCCCCCCH
Confidence            999876  48999999999998763            25789999998 667799999999999999886 578999999


Q ss_pred             HHHHHHcCc--HHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcC--CHHHHHHHHhhCCccccccCCCCChHHHHHHHc
Q 045393          160 LSIAIDARL--NDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQ--NYDIMVKILGTNKELIDRLDWHQRNPLHYAAAS  235 (580)
Q Consensus       160 L~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~--~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~  235 (580)
                      ||.|+..++  .+++++|++.+. +++..+. .|.||||.|+..+  +.++++.|+. + .+++.+|..|.||||+|+..
T Consensus       177 Lh~A~~~~~~~~~~v~~Ll~~Ga-din~~d~-~G~TpLH~Aa~~~~~~~~iv~lLl~-g-adin~~d~~G~TpLh~A~~~  252 (446)
T PHA02946        177 IHRHLMSDNPKASTISWMMKLGI-SPSKPDH-DGNTPLHIVCSKTVKNVDIINLLLP-S-TDVNKQNKFGDSPLTLLIKT  252 (446)
T ss_pred             HHHHHHhcCCCHHHHHHHHHcCC-CCcccCC-CCCCHHHHHHHcCCCcHHHHHHHHc-C-CCCCCCCCCCCCHHHHHHHh
Confidence            999887554  689999999984 5566665 8999999999986  7888888885 4 55999999999999999999


Q ss_pred             CC-hHHHHHHHHhchhcc-------------------cc-cCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCC
Q 045393          236 GN-VKMAQRLLEESKRLA-------------------YK-RDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDR  294 (580)
Q Consensus       236 g~-~~~v~~Ll~~~~~~~-------------------~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~  294 (580)
                      ++ .++++.|+++|+...                   +. .+..|.||||+|+.+|+.+++++|+++++        .|+
T Consensus       253 ~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~--------~~~  324 (446)
T PHA02946        253 LSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI--------ICE  324 (446)
T ss_pred             CChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC--------ccc
Confidence            88 589999999875320                   11 12357899999999999999999999864        478


Q ss_pred             CHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcC
Q 045393          295 SILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRH  351 (580)
Q Consensus       295 t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~  351 (580)
                      ||||+|+.+++.+++++|+.++.   ++|.+ .+|+||||+|++.++.++++.|+.+
T Consensus       325 t~L~~A~~~~~~~~v~~Ll~~ga---~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~  377 (446)
T PHA02946        325 DAMYYAVLSEYETMVDYLLFNHF---SVDSV-VNGHTCMSECVRLNNPVILSKLMLH  377 (446)
T ss_pred             cHHHHHHHhCHHHHHHHHHHCCC---CCCCc-cccccHHHHHHHcCCHHHHHHHHhc
Confidence            99999999999999999999954   48885 6899999999999999999999975


No 6  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.7e-42  Score=355.19  Aligned_cols=316  Identities=19%  Similarity=0.243  Sum_probs=267.3

Q ss_pred             CCHHHHHHHHcCCHHHHHHHhhhc-CcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcH
Q 045393            1 MDQELLEVLRHGDEYKIKQLALRQ-DIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETA   79 (580)
Q Consensus         1 m~~~L~~A~~~g~~~~~~~ll~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tp   79 (580)
                      |+..|..|+..||++.++.+++.+ ...+..+.+|.||||.|+..|+.++|++|++.|++         ++..+..|.||
T Consensus         1 ~~~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~---------~n~~~~~~~t~   71 (434)
T PHA02874          1 ASQDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGAD---------INHINTKIPHP   71 (434)
T ss_pred             CcHHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---------CCCCCCCCCCH
Confidence            677899999999999999999764 44455677899999999999999999999999998         78889999999


Q ss_pred             HHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCH
Q 045393           80 LHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTP  159 (580)
Q Consensus        80 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tp  159 (580)
                      ||.|+..|+.+++++|+++|++...                       .+....+.++++.|++.|.+++ ..+..|.||
T Consensus        72 L~~A~~~~~~~iv~~Ll~~g~~~~~-----------------------~~~~~~~~~~i~~ll~~g~d~n-~~~~~g~T~  127 (434)
T PHA02874         72 LLTAIKIGAHDIIKLLIDNGVDTSI-----------------------LPIPCIEKDMIKTILDCGIDVN-IKDAELKTF  127 (434)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCc-----------------------chhccCCHHHHHHHHHCcCCCC-CCCCCCccH
Confidence            9999999999999999999876421                       1223456789999999999887 478899999


Q ss_pred             HHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChH
Q 045393          160 LSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVK  239 (580)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~  239 (580)
                      ||+|+..|+.+++++|++++. +++..+. .|.||||.|+..++.++++.|++.+.. ++..+..|.||||+|+..|+.+
T Consensus       128 Lh~A~~~~~~~~v~~Ll~~ga-d~n~~d~-~g~tpLh~A~~~~~~~iv~~Ll~~g~~-~n~~~~~g~tpL~~A~~~g~~~  204 (434)
T PHA02874        128 LHYAIKKGDLESIKMLFEYGA-DVNIEDD-NGCYPIHIAIKHNFFDIIKLLLEKGAY-ANVKDNNGESPLHNAAEYGDYA  204 (434)
T ss_pred             HHHHHHCCCHHHHHHHHhCCC-CCCCcCC-CCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHH
Confidence            999999999999999999884 4455555 899999999999999999999998865 7788899999999999999999


Q ss_pred             HHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcC-CHHHHHHHhcCcch
Q 045393          240 MAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHG-NWNIVSFILRSPEM  318 (580)
Q Consensus       240 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~-~~~iv~~Ll~~~~~  318 (580)
                      ++++|++.|++. +.++..|.||||.|+..+. +.+++|+ .+++ ++.+|..|+||||+|+..+ +.+++++|+++   
T Consensus       205 iv~~Ll~~g~~i-~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~-in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~---  277 (434)
T PHA02874        205 CIKLLIDHGNHI-MNKCKNGFTPLHNAIIHNR-SAIELLI-NNAS-INDQDIDGSTPLHHAINPPCDIDIIDILLYH---  277 (434)
T ss_pred             HHHHHHhCCCCC-cCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCC-CCCcCCCCCCHHHHHHhcCCcHHHHHHHHHC---
Confidence            999999999887 6678889999999998765 5666666 5677 7889999999999999875 78999999998   


Q ss_pred             hhhcccccCCCCcHHHHHHhcC-ChhHHHHhhcCccccccccc
Q 045393          319 ENLINLVDRNGNTPLHLAAMGL-HSDVVFTLSRHKSVNIRAKN  360 (580)
Q Consensus       319 ~~~~n~~d~~G~T~Lh~A~~~~-~~~~~~~Ll~~~~~d~~~~n  360 (580)
                      +++++.+|..|+||||+|+..+ ..++++.|+.+ ++.++..+
T Consensus       278 gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~-~~~~~~~~  319 (434)
T PHA02874        278 KADISIKDNKGENPIDTAFKYINKDPVIKDIIAN-AVLIKEAD  319 (434)
T ss_pred             cCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHh-cCchhhcc
Confidence            4558999999999999999887 56778888765 44444433


No 7  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=4e-43  Score=351.25  Aligned_cols=350  Identities=23%  Similarity=0.263  Sum_probs=299.2

Q ss_pred             HHHHcCCHH-HHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHH
Q 045393            7 EVLRHGDEY-KIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAAR   85 (580)
Q Consensus         7 ~A~~~g~~~-~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~   85 (580)
                      ..+..+..+ ....+++........+..|.|++|.|+..+..      +++-..         ..+.|..|.||||+|+.
T Consensus        33 ~~~~~~~~dD~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~---------~~a~D~~~n~~l~~a~~   97 (929)
T KOG0510|consen   33 SQALADTLDDRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAI---------SYAKDSADNTPLHAAVE   97 (929)
T ss_pred             HHHHHhhHHHHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhh---------hhhhhcccCchhHHHhh
Confidence            333444333 44445555555556778899999999998866      332222         56789999999999999


Q ss_pred             hCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHH
Q 045393           86 IGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAID  165 (580)
Q Consensus        86 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~  165 (580)
                      ....+.++.|++.|++.+             ..|.++.+|+|+|+..++.++.+.|+++|++++ ..+..+.||||.|+.
T Consensus        98 ~~~~~~i~~Lls~gad~~-------------~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvn-l~de~~~TpLh~A~~  163 (929)
T KOG0510|consen   98 YNQGDKIQVLLSYGADTP-------------LRNLNKNAPLHLAADSGNYSCLKLLLDYGADVN-LEDENGFTPLHLAAR  163 (929)
T ss_pred             cchHHHHHHHHhcCCCCC-------------hhhhhccCchhhccccchHHHHHHHHHhcCCcc-ccccCCCchhhHHHh
Confidence            999999999999999865             478899999999999999999999999998887 689999999999999


Q ss_pred             cCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCC----ccccccCCCCChHHHHHHHcCChHHH
Q 045393          166 ARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNK----ELIDRLDWHQRNPLHYAAASGNVKMA  241 (580)
Q Consensus       166 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~----~~~~~~d~~g~t~L~~A~~~g~~~~v  241 (580)
                      .++.|..+.|++.+.+ +...+. .|..|+|.|+..|..++.+..+.+.+    ..++..+..|.||||.|+..|+.+++
T Consensus       164 ~~~~E~~k~Li~~~a~-~~K~~~-~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~l  241 (929)
T KOG0510|consen  164 KNKVEAKKELINKGAD-PCKSDI-DGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEML  241 (929)
T ss_pred             cChHHHHHHHHhcCCC-CCcccC-cCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHH
Confidence            9999988999998854 444444 89999999999999999999998322    23777889999999999999999999


Q ss_pred             HHHHHhchhcc--------------cccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHH
Q 045393          242 QRLLEESKRLA--------------YKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWN  307 (580)
Q Consensus       242 ~~Ll~~~~~~~--------------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~  307 (580)
                      +..|+.+....              +..|++|.||||+|++.|+.+.++.|+..|++ ++.++.++.||||.|+.+|+.+
T Consensus       242 k~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~d~~spLH~AA~yg~~n  320 (929)
T KOG0510|consen  242 KMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS-INSKNKDEESPLHFAAIYGRIN  320 (929)
T ss_pred             HHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-ccccCCCCCCchHHHHHcccHH
Confidence            99999885432              33578999999999999999999999999999 9999999999999999999999


Q ss_pred             HHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccc---cccccCCCCCHHHHHHHHhhCChhhHH
Q 045393          308 IVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIR---AKNHSARSNTALEIAEITRANGKEIQK  384 (580)
Q Consensus       308 iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~---~~n~~~~g~t~l~~a~~~~~~~~~~~~  384 (580)
                      .++-|++ ..+-.++|..|..|+||||+|+++|+.++++.|+.. |++.+   -.|.  +|.||||.|+.       .++
T Consensus       321 tv~rLL~-~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~-GA~~~~~~e~D~--dg~TaLH~Aa~-------~g~  389 (929)
T KOG0510|consen  321 TVERLLQ-ESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNK-GALFLNMSEADS--DGNTALHLAAK-------YGN  389 (929)
T ss_pred             HHHHHHh-CcCccccccccccCCCchhhhhhcCHHHHHHHHHhc-Chhhhccccccc--CCchhhhHHHH-------hcc
Confidence            9999999 333567999999999999999999999999999965 66665   3477  99999999998       567


Q ss_pred             HHHHHHHHHhhhhhh
Q 045393          385 HLTLKALKTAYAKRA  399 (580)
Q Consensus       385 ~~~~~~L~~~ga~~~  399 (580)
                      ...++.|+..|++.+
T Consensus       390 ~~av~~Li~~Ga~I~  404 (929)
T KOG0510|consen  390 TSAVQKLISHGADIG  404 (929)
T ss_pred             HHHHHHHHHcCCcee
Confidence            788999999999974


No 8  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=2.5e-42  Score=362.11  Aligned_cols=357  Identities=15%  Similarity=0.126  Sum_probs=265.0

Q ss_pred             HcCCHHHHHHHhhhc-Cccccc-CCCCCchhhHHHh--cCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHH
Q 045393           10 RHGDEYKIKQLALRQ-DIFSTS-SPGGNAVLHMAVR--FRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAAR   85 (580)
Q Consensus        10 ~~g~~~~~~~ll~~~-~~~~~~-~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~   85 (580)
                      +.++.+++++|++.| ...+.. +..|.||||.|+.  .++.+++++|+++|++         ++.+|..|.||||+|++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD---------VN~kD~~G~TPLH~Aa~  221 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVN---------VNLQNNHLITPLHTYLI  221 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHH
Confidence            468899999999988 555555 7889999998764  4678999999999988         88889999999999999


Q ss_pred             hCC--HHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHH---HcCcHHHHHHHHHcCCCCCcccccCCCCHH
Q 045393           86 IGD--RAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAV---TNQHKRVIRILVEKDSVPSSYINKAYQTPL  160 (580)
Q Consensus        86 ~g~--~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~---~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL  160 (580)
                      .|+  .++|+.|+++|++++             .+|..|.||||+|+   .+++.|+++.|++.+.... .  .....++
T Consensus       222 ~g~~~~eIVklLLe~GADVN-------------~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~-~--~~~~~~L  285 (764)
T PHA02716        222 TGNVCASVIKKIIELGGDMD-------------MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK-V--KNIPMIL  285 (764)
T ss_pred             cCCCCHHHHHHHHHcCCCCC-------------CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc-c--ccchhhh
Confidence            885  489999999998876             47888999999875   4678899999988653221 1  1112233


Q ss_pred             H---HHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHH--cCCHHHHHHHHhhCCccccccCCCCChHHHHHHH-
Q 045393          161 S---IAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVM--RQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAA-  234 (580)
Q Consensus       161 ~---~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~--~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~-  234 (580)
                      +   .|+..|+.+++++|+++++ +++..+. .|.||||.|+.  .++.++++.|++.+.+ ++.+|..|+||||+|+. 
T Consensus       286 ~~~i~AA~~g~leiVklLLe~GA-dIN~kD~-~G~TPLH~Aaa~~~~~~eIVklLLe~GAD-IN~kD~~G~TPLH~A~~~  362 (764)
T PHA02716        286 HSYITLARNIDISVVYSFLQPGV-KLHYKDS-AGRTCLHQYILRHNISTDIIKLLHEYGND-LNEPDNIGNTVLHTYLSM  362 (764)
T ss_pred             HHHHHHHHcCCHHHHHHHHhCCC-ceeccCC-CCCCHHHHHHHHhCCCchHHHHHHHcCCC-CccCCCCCCCHHHHHHHh
Confidence            3   3678899999999999885 4555565 89999998764  4578899999988765 88889999999998865 


Q ss_pred             -------------cCChHHHHHHHHhchhcccccCCCCCcHHHH----HHHcCcHHHHHHHHHhCCCccccc--------
Q 045393          235 -------------SGNVKMAQRLLEESKRLAYKRDCNGETPLHL----AAENGKLKVLKLLINKYPDAIEIR--------  289 (580)
Q Consensus       235 -------------~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~----A~~~g~~~~v~~Ll~~~~~~~~~~--------  289 (580)
                                   .++.+++++|+++|+++ +.+|..|.||||.    |...++.+++++|++.+.. ....        
T Consensus       363 lav~~~ld~~~~~~~~~eVVklLL~~GADI-n~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~-~~~~~~~~q~ll  440 (764)
T PHA02716        363 LSVVNILDPETDNDIRLDVIQCLISLGADI-TAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVL-NMVKHRILQDLL  440 (764)
T ss_pred             hhhhccccccccccChHHHHHHHHHCCCCC-CCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcch-hhhhhhhhhhhh
Confidence                         36789999999999887 7788899999983    2335778999999987654 1111        


Q ss_pred             cCCCCCH--HHHHHHcCCHHHHHHHhcCc---------------chhhhcccccCCCCcHHHHHHhcCChh-----HHHH
Q 045393          290 NNSDRSI--LHVAAKHGNWNIVSFILRSP---------------EMENLINLVDRNGNTPLHLAAMGLHSD-----VVFT  347 (580)
Q Consensus       290 d~~g~t~--Lh~A~~~~~~~iv~~Ll~~~---------------~~~~~~n~~d~~G~T~Lh~A~~~~~~~-----~~~~  347 (580)
                      +..+.+|  +|.++..++.+...++.+..               .....+|.+|..|+||||+|+..|+.+     ++++
T Consensus       441 ~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~  520 (764)
T PHA02716        441 IRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVY  520 (764)
T ss_pred             hccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHH
Confidence            1222333  45555444433332222110               012346888999999999999998864     4599


Q ss_pred             hhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhhhhcc
Q 045393          348 LSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAKRALS  401 (580)
Q Consensus       348 Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~~~~  401 (580)
                      |++. |+|+|.+|.  .|+|||++|...  ...+....++++.|++.|+.....
T Consensus       521 LL~~-GADIN~~d~--~G~TPLh~A~~~--g~~~~~~~eIvk~LL~~ga~~~~~  569 (764)
T PHA02716        521 LLSI-QYNINIPTK--NGVTPLMLTMRN--NRLSGHQWYIVKNILDKRPNVDIV  569 (764)
T ss_pred             HHhC-CCCCcccCC--CCCCHHHHHHHc--CCccccHHHHHHHHHhcCCCcchH
Confidence            9965 999999999  999999999981  112234568999999988876543


No 9  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.2e-42  Score=353.49  Aligned_cols=310  Identities=23%  Similarity=0.294  Sum_probs=269.5

Q ss_pred             chhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhh
Q 045393           36 AVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLF  115 (580)
Q Consensus        36 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l  115 (580)
                      ..|+.|+..|+.+.++.|++.++.        .++..+..|.||||.|++.|+.+++++|++.|++++            
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~--------~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n------------   62 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGN--------CINISVDETTTPLIDAIRSGDAKIVELFIKHGADIN------------   62 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCC--------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------------
Confidence            358899999999999999987765        477788899999999999999999999999999876            


Q ss_pred             hccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHH
Q 045393          116 RMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLI  195 (580)
Q Consensus       116 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L  195 (580)
                       ..+..|.||||.|+..|+.+++++|+++|++...           .+......++++.+++.+. +++..+. .|.|||
T Consensus        63 -~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~-----------~~~~~~~~~~i~~ll~~g~-d~n~~~~-~g~T~L  128 (434)
T PHA02874         63 -HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSI-----------LPIPCIEKDMIKTILDCGI-DVNIKDA-ELKTFL  128 (434)
T ss_pred             -CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc-----------chhccCCHHHHHHHHHCcC-CCCCCCC-CCccHH
Confidence             3678899999999999999999999999987542           1233457899999999884 4555555 899999


Q ss_pred             HHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHH
Q 045393          196 HFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVL  275 (580)
Q Consensus       196 ~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v  275 (580)
                      |.|+..|+.++++.|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|++. +..+..|.||||+|+..|+.+++
T Consensus       129 h~A~~~~~~~~v~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~g~~~iv  206 (434)
T PHA02874        129 HYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESPLHNAAEYGDYACI  206 (434)
T ss_pred             HHHHHCCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHH
Confidence            999999999999999998876 8889999999999999999999999999999887 67789999999999999999999


Q ss_pred             HHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcC-ChhHHHHhhcCccc
Q 045393          276 KLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGL-HSDVVFTLSRHKSV  354 (580)
Q Consensus       276 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~-~~~~~~~Ll~~~~~  354 (580)
                      ++|++++++ ++.++..|+||||.|+..++ +.+++|+.    +.++|.+|.+|+||||+|+..+ +.+++++|+.+ |+
T Consensus       207 ~~Ll~~g~~-i~~~~~~g~TpL~~A~~~~~-~~i~~Ll~----~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~-ga  279 (434)
T PHA02874        207 KLLIDHGNH-IMNKCKNGFTPLHNAIIHNR-SAIELLIN----NASINDQDIDGSTPLHHAINPPCDIDIIDILLYH-KA  279 (434)
T ss_pred             HHHHhCCCC-CcCCCCCCCCHHHHHHHCCh-HHHHHHHc----CCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHC-cC
Confidence            999999999 78899999999999999876 56677764    4558999999999999999876 78999999965 99


Q ss_pred             ccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhh
Q 045393          355 NIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYA  396 (580)
Q Consensus       355 d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga  396 (580)
                      |++.+|.  .|+|||++|....      ....+++.|++.+.
T Consensus       280 d~n~~d~--~g~TpL~~A~~~~------~~~~~ik~ll~~~~  313 (434)
T PHA02874        280 DISIKDN--KGENPIDTAFKYI------NKDPVIKDIIANAV  313 (434)
T ss_pred             CCCCCCC--CCCCHHHHHHHhC------CccHHHHHHHHhcC
Confidence            9999999  9999999998721      13345566666554


No 10 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.7e-41  Score=347.39  Aligned_cols=367  Identities=14%  Similarity=0.123  Sum_probs=285.2

Q ss_pred             HHHHHHHHcC---CHHHHHHHhhhcCcccccCCCCCchhhHHHhcC--CHHHHHHHHhhCchhHHhhhhhhcccccCCCC
Q 045393            3 QELLEVLRHG---DEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFR--NQQVIREILRQQDFIALRLHYSLLRQKNLMDE   77 (580)
Q Consensus         3 ~~L~~A~~~g---~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~   77 (580)
                      ++||.|+..|   +.++++.|++.|+..+..|..|+||||+|+..|  +.|+|++|++.|++       ...+..+..++
T Consensus        43 TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~-------~~~~~~~~~~d  115 (672)
T PHA02730         43 NALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSN-------ASNELTSNIND  115 (672)
T ss_pred             cHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCC-------CCcccccccCC
Confidence            6899999887   589999999999888888899999999998866  79999999998765       11455666788


Q ss_pred             cHHHHHHH--hCCHHHHHHHHh-cCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcc---
Q 045393           78 TALHIAAR--IGDRAIVSEIMK-YLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSY---  151 (580)
Q Consensus        78 tpLh~Aa~--~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~---  151 (580)
                      +|||.++.  +++.+++++|++ .+.+++....        ...+..|.+|++++...++.|+|++|+++|++....   
T Consensus       116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~--------~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~  187 (672)
T PHA02730        116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTN--------YYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFR  187 (672)
T ss_pred             chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhh--------hhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccc
Confidence            89888888  888999999996 5556542100        001247899999999999999999999999988522   


Q ss_pred             ----cccCCCCHHHHH------HHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHH--HHHcCCHHHHHHHHh-------
Q 045393          152 ----INKAYQTPLSIA------IDARLNDIACFIIDKSPESLNTTRLPDELTLIHF--VVMRQNYDIMVKILG-------  212 (580)
Q Consensus       152 ----~~~~g~tpL~~A------~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~--A~~~~~~~~~~~Ll~-------  212 (580)
                          .+....+.||+.      ..+++.|++++|+++| .+++.++. .|.||||.  +...++.|+++.|++       
T Consensus       188 ~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~G-adIN~kd~-~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~  265 (672)
T PHA02730        188 SCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNN-VSIHGRDE-GGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSV  265 (672)
T ss_pred             cccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCC-CCCCCCCC-CCCCHHHHHHHcCcccHHHHHHHHhccccccc
Confidence                222233445533      3567899999999999 46677777 99999995  445567999999998       


Q ss_pred             -------------------------hCCccccc--------------------cCCCCCh--------------------
Q 045393          213 -------------------------TNKELIDR--------------------LDWHQRN--------------------  227 (580)
Q Consensus       213 -------------------------~~~~~~~~--------------------~d~~g~t--------------------  227 (580)
                                               .+.+ ...                    .+..|.+                    
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q  344 (672)
T PHA02730        266 YDDISQPYIRGVLADYLNKRFRVTPYNVD-MEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQ  344 (672)
T ss_pred             cccccchhhhhhHHHhhhhhhhcccCCcc-hHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHH
Confidence                                     2322 222                    3445543                    


Q ss_pred             -HHHHHHHcC---ChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCc----HHHHHHHHHhCCC-ccccccCCCCCHHH
Q 045393          228 -PLHYAAASG---NVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGK----LKVLKLLINKYPD-AIEIRNNSDRSILH  298 (580)
Q Consensus       228 -~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~-~~~~~d~~g~t~Lh  298 (580)
                       .||.-.+.+   +.++++.|+++|+++. .. ..|.||||+|+..++    .+++++|+++|++ .++.+|..|+||||
T Consensus       345 ~~l~~Y~~~~~~v~ieIvelLIs~GAdIN-~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh  422 (672)
T PHA02730        345 AMLINYLHYGDMVSIPILRCMLDNGATMD-KT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMY  422 (672)
T ss_pred             HHHHHHHhcCCcCcHHHHHHHHHCCCCCC-cC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHh
Confidence             566656655   5899999999999984 43 789999999998875    8999999999984 48889999999999


Q ss_pred             H---HHHcC---------CHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCC
Q 045393          299 V---AAKHG---------NWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSN  366 (580)
Q Consensus       299 ~---A~~~~---------~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~  366 (580)
                      .   |...+         ..+++++|+++   ++++|.+|..|+||||+|+..++.+++++|+.+ |+++|.++.. .|.
T Consensus       423 ~~i~a~~~n~~~~~~e~~~~~ivk~LIs~---GADINakD~~G~TPLh~Aa~~~~~eive~LI~~-GAdIN~~d~~-~g~  497 (672)
T PHA02730        423 GLILSRFNNCGYHCYETILIDVFDILSKY---MDDIDMIDNENKTLLYYAVDVNNIQFARRLLEY-GASVNTTSRS-IIN  497 (672)
T ss_pred             HHHHHHhccccccccchhHHHHHHHHHhc---ccchhccCCCCCCHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCc-CCc
Confidence            4   33332         23579999999   555999999999999999999999999999965 9999999961 489


Q ss_pred             CHHHHHHHHhhCChhhHHHHHHHHHHHhhhhhh
Q 045393          367 TALEIAEITRANGKEIQKHLTLKALKTAYAKRA  399 (580)
Q Consensus       367 t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~~  399 (580)
                      ||++.|....     ....++++.|++.|++..
T Consensus       498 TaL~~Aa~~~-----~~~~eIv~~LLs~ga~i~  525 (672)
T PHA02730        498 TAIQKSSYRR-----ENKTKLVDLLLSYHPTLE  525 (672)
T ss_pred             CHHHHHHHhh-----cCcHHHHHHHHHcCCCHH
Confidence            9999997611     135678999999988754


No 11 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.3e-41  Score=343.39  Aligned_cols=352  Identities=17%  Similarity=0.145  Sum_probs=281.4

Q ss_pred             HHHHHHHhhhc-CcccccCCCCCchhhHHHhcC---CHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhC--
Q 045393           14 EYKIKQLALRQ-DIFSTSSPGGNAVLHMAVRFR---NQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIG--   87 (580)
Q Consensus        14 ~~~~~~ll~~~-~~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g--   87 (580)
                      ...++..++.. .+....|.+|+||||+|+..|   +.|+|++|+++|++         ++.+|..|+||||+|+..+  
T Consensus        20 ~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAd---------in~kD~~G~TPLh~Aa~~~~~   90 (672)
T PHA02730         20 YKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVE---------RLCRNNEGLTPLGVYSKRKYV   90 (672)
T ss_pred             HHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCC---------CcccCCCCCChHHHHHHcCCC
Confidence            34566667766 555578889999999999997   59999999999999         8999999999999999977  


Q ss_pred             CHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHH--cCcHHHHHHHHH-cCCCCCcccc----cCCCCHH
Q 045393           88 DRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVT--NQHKRVIRILVE-KDSVPSSYIN----KAYQTPL  160 (580)
Q Consensus        88 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~--~~~~~~v~~Ll~-~~~~~~~~~~----~~g~tpL  160 (580)
                      +.++++.|++.|++.+.           +..+..+.+|||.++.  +++.+++++|++ .+.+++...+    ..|.+|+
T Consensus        91 ~~eIv~~Ll~~~~~~~~-----------~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~  159 (672)
T PHA02730         91 KSQIVHLLISSYSNASN-----------ELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDI  159 (672)
T ss_pred             cHHHHHHHHhcCCCCCc-----------ccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhh
Confidence            79999999999875421           1357779999999988  899999999997 5566664333    4789999


Q ss_pred             HHHHHcCcHHHHHHHHhcCCCCcCC------CCCCCCccHHHHHH------HcCCHHHHHHHHhhCCccccccCCCCChH
Q 045393          161 SIAIDARLNDIACFIIDKSPESLNT------TRLPDELTLIHFVV------MRQNYDIMVKILGTNKELIDRLDWHQRNP  228 (580)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~------~~~~~~~t~L~~A~------~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~  228 (580)
                      +++...++.+++++|+++++.....      .+.+...+.||+.+      ..++.++++.|+.+|.+ ++.+|..|.||
T Consensus       160 yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~Gad-IN~kd~~G~Tp  238 (672)
T PHA02730        160 YVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVS-IHGRDEGGSLP  238 (672)
T ss_pred             hHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence            9999999999999999999765211      22324456666443      45678999999999976 99999999999


Q ss_pred             HHH--HHHcCChHHHHHHHH--------------------------------hchhcccc--------------------
Q 045393          229 LHY--AAASGNVKMAQRLLE--------------------------------ESKRLAYK--------------------  254 (580)
Q Consensus       229 L~~--A~~~g~~~~v~~Ll~--------------------------------~~~~~~~~--------------------  254 (580)
                      ||+  +...|+.|++++|++                                +|++. ..                    
T Consensus       239 Lh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~i~~~~~~~~~~~~~~~~~~~~  317 (672)
T PHA02730        239 IQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDM-EIVNLLIEGRHTLIDVMRSITS  317 (672)
T ss_pred             HHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcch-HHHHHHhhccCcchhhhhcccc
Confidence            995  555677999999999                                45544 12                    


Q ss_pred             cCCCCCc---------------------HHHHHHHcC---cHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCC----H
Q 045393          255 RDCNGET---------------------PLHLAAENG---KLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGN----W  306 (580)
Q Consensus       255 ~~~~g~t---------------------pL~~A~~~g---~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~----~  306 (580)
                      .+..|.+                     .||.-...+   +.+++++|+++|++ ++.. ..|+||||+|+..++    .
T Consensus       318 ~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAd-IN~k-~~G~TpLH~Aa~~nnn~i~~  395 (672)
T PHA02730        318 YDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGAT-MDKT-TDNNYPLHDYFVNNNNIVDV  395 (672)
T ss_pred             ccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCC-CCcC-CCCCcHHHHHHHHcCCcchH
Confidence            3445543                     566666655   68999999999999 7764 799999999998875    8


Q ss_pred             HHHHHHhcCcchhhhcccccCCCCcHHHH---HHhcC---------ChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          307 NIVSFILRSPEMENLINLVDRNGNTPLHL---AAMGL---------HSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       307 ~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~---A~~~~---------~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      +++++|+++|+. .++|.+|.+|.||||.   |...+         ..+++++|+.+ |+|+|.+|.  .|+|||++|..
T Consensus       396 eIvelLIs~Ga~-~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~-GADINakD~--~G~TPLh~Aa~  471 (672)
T PHA02730        396 NVVRFIVENNGH-MAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKY-MDDIDMIDN--ENKTLLYYAVD  471 (672)
T ss_pred             HHHHHHHHcCCC-ccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhc-ccchhccCC--CCCCHHHHHHH
Confidence            999999998641 3589999999999994   33332         12468899965 999999999  99999999998


Q ss_pred             HhhCChhhHHHHHHHHHHHhhhhhhc
Q 045393          375 TRANGKEIQKHLTLKALKTAYAKRAL  400 (580)
Q Consensus       375 ~~~~~~~~~~~~~~~~L~~~ga~~~~  400 (580)
                             ....++++.|++.||+...
T Consensus       472 -------~~~~eive~LI~~GAdIN~  490 (672)
T PHA02730        472 -------VNNIQFARRLLEYGASVNT  490 (672)
T ss_pred             -------hCCHHHHHHHHHCCCCCCC
Confidence                   4567889999999997544


No 12 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.6e-40  Score=348.54  Aligned_cols=282  Identities=20%  Similarity=0.237  Sum_probs=188.4

Q ss_pred             HHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcC---CHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHH
Q 045393            7 EVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFR---NQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIA   83 (580)
Q Consensus         7 ~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~A   83 (580)
                      .++..++.+++++|++.|...+..+..|.||||+|+..|   +.++++.|++.|++         ++.++..|.||||+|
T Consensus        20 ~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad---------in~~~~~g~TpLh~A   90 (471)
T PHA03095         20 LNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD---------VNAPERCGFTPLHLY   90 (471)
T ss_pred             HcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCC---------CCCCCCCCCCHHHHH
Confidence            456667777777777777666667777777777777777   77777777777777         677777777777777


Q ss_pred             HHhC-CHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHH--HcCcHHHHHHHHHcCCCCCcccccCCCCHH
Q 045393           84 ARIG-DRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAV--TNQHKRVIRILVEKDSVPSSYINKAYQTPL  160 (580)
Q Consensus        84 a~~g-~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL  160 (580)
                      +..| +.+++++|+++|++++             .+|..|.||||+|+  ..++.+++++|+++|++++ ..+..|.|||
T Consensus        91 ~~~~~~~~iv~lLl~~ga~in-------------~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~-~~d~~g~tpL  156 (471)
T PHA03095         91 LYNATTLDVIKLLIKAGADVN-------------AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN-ALDLYGMTPL  156 (471)
T ss_pred             HHcCCcHHHHHHHHHcCCCCC-------------CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC-ccCCCCCCHH
Confidence            7777 4777777777777755             36667777777777  4456777777777777765 4567777777


Q ss_pred             HHHHHcC--cHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHc--CCHHHHHHHHhhCCccccccCCCCChHHHHHHHcC
Q 045393          161 SIAIDAR--LNDIACFIIDKSPESLNTTRLPDELTLIHFVVMR--QNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASG  236 (580)
Q Consensus       161 ~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~--~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g  236 (580)
                      |+|+..+  +.+++++|++++...... +. .|.||||.++..  ++.++++.|++.+.+ ++.+|..|.||||+|+..|
T Consensus       157 ~~a~~~~~~~~~iv~~Ll~~g~~~~~~-d~-~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~-~~~~d~~g~tpLh~Aa~~~  233 (471)
T PHA03095        157 AVLLKSRNANVELLRLLIDAGADVYAV-DD-RFRSLLHHHLQSFKPRARIVRELIRAGCD-PAATDMLGNTPLHSMATGS  233 (471)
T ss_pred             HHHHHcCCCCHHHHHHHHHcCCCCccc-CC-CCCCHHHHHHHHCCCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHhcC
Confidence            7776654  466777777776433222 33 666666666643  455666666665544 5666666666666666666


Q ss_pred             Ch--HHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhc
Q 045393          237 NV--KMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILR  314 (580)
Q Consensus       237 ~~--~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~  314 (580)
                      +.  .+++.|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+.+|+.++++.|++
T Consensus       234 ~~~~~~v~~ll~~g~di-n~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad-~n~~~~~g~tpl~~A~~~~~~~~v~~LL~  311 (471)
T PHA03095        234 SCKRSLVLPLLIAGISI-NARNRYGQTPLHYAAVFNNPRACRRLIALGAD-INAVSSDGNTPLSLMVRNNNGRAVRAALA  311 (471)
T ss_pred             CchHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence            43  4555666666655 45556666666666666666666666666666 56666666666666666666666666666


Q ss_pred             Cc
Q 045393          315 SP  316 (580)
Q Consensus       315 ~~  316 (580)
                      .+
T Consensus       312 ~~  313 (471)
T PHA03095        312 KN  313 (471)
T ss_pred             hC
Confidence            53


No 13 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.8e-40  Score=344.90  Aligned_cols=291  Identities=20%  Similarity=0.227  Sum_probs=261.3

Q ss_pred             hHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhC---CHHHHHHHHhcCcccccCCCcchhhhhh
Q 045393           39 HMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIG---DRAIVSEIMKYLPAVNQVGPAPVLESLF  115 (580)
Q Consensus        39 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~l  115 (580)
                      ..++..++.++|++|++.|++         ++.++..|.||||+|+..|   +.++++.|+++|++++            
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~---------vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin------------   77 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGAD---------VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVN------------   77 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCC---------cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCC------------
Confidence            456788999999999999998         8899999999999999999   9999999999999976            


Q ss_pred             hccCCCCCcHHHHHHHcC-cHHHHHHHHHcCCCCCcccccCCCCHHHHHH--HcCcHHHHHHHHhcCCCCcCCCCCCCCc
Q 045393          116 RMTDIEGNTPLHNAVTNQ-HKRVIRILVEKDSVPSSYINKAYQTPLSIAI--DARLNDIACFIIDKSPESLNTTRLPDEL  192 (580)
Q Consensus       116 ~~~d~~g~tpL~~A~~~~-~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~  192 (580)
                       .++..|.||||+|+..+ +.+++++|+++|++++ ..+..|.||||.|+  ..++.+++++|++++. +++..+. .|.
T Consensus        78 -~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in-~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~ga-d~~~~d~-~g~  153 (471)
T PHA03095         78 -APERCGFTPLHLYLYNATTLDVIKLLIKAGADVN-AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGA-DVNALDL-YGM  153 (471)
T ss_pred             -CCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCC-CCCccCC-CCC
Confidence             47789999999999999 5999999999999987 57889999999999  5568899999999985 4555555 899


Q ss_pred             cHHHHHHHcC--CHHHHHHHHhhCCccccccCCCCChHHHHHHHc--CChHHHHHHHHhchhcccccCCCCCcHHHHHHH
Q 045393          193 TLIHFVVMRQ--NYDIMVKILGTNKELIDRLDWHQRNPLHYAAAS--GNVKMAQRLLEESKRLAYKRDCNGETPLHLAAE  268 (580)
Q Consensus       193 t~L~~A~~~~--~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~  268 (580)
                      ||||.|+..+  +.++++.|++.+.. ++..|..|.||||.++..  ++.++++.|++.|+++ +.+|..|.||||+|+.
T Consensus       154 tpL~~a~~~~~~~~~iv~~Ll~~g~~-~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~-~~~d~~g~tpLh~Aa~  231 (471)
T PHA03095        154 TPLAVLLKSRNANVELLRLLIDAGAD-VYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDP-AATDMLGNTPLHSMAT  231 (471)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHh
Confidence            9999999876  68999999999877 555699999999999875  7789999999999998 7889999999999999


Q ss_pred             cCcH--HHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHH
Q 045393          269 NGKL--KVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVF  346 (580)
Q Consensus       269 ~g~~--~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~  346 (580)
                      .|+.  .+++.|++.|.+ ++.+|..|+||||+|+..|+.+++++|++.   ++++|.+|.+|.||||+|+..|+.++++
T Consensus       232 ~~~~~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~~~~~~~~v~~LL~~---gad~n~~~~~g~tpl~~A~~~~~~~~v~  307 (471)
T PHA03095        232 GSSCKRSLVLPLLIAGIS-INARNRYGQTPLHYAAVFNNPRACRRLIAL---GADINAVSSDGNTPLSLMVRNNNGRAVR  307 (471)
T ss_pred             cCCchHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHhCCHHHHH
Confidence            9975  688999999999 899999999999999999999999999998   4559999999999999999999999999


Q ss_pred             HhhcCcccccccccc
Q 045393          347 TLSRHKSVNIRAKNH  361 (580)
Q Consensus       347 ~Ll~~~~~d~~~~n~  361 (580)
                      .|+.. +++++....
T Consensus       308 ~LL~~-~~~~~~~~~  321 (471)
T PHA03095        308 AALAK-NPSAETVAA  321 (471)
T ss_pred             HHHHh-CCCHHHHHH
Confidence            99965 667665443


No 14 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.9e-39  Score=343.61  Aligned_cols=359  Identities=13%  Similarity=0.062  Sum_probs=234.3

Q ss_pred             HHHHHHHHc---CCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHH----HHHHHHhhCchhHHhhhhhhcccccCC
Q 045393            3 QELLEVLRH---GDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQ----VIREILRQQDFIALRLHYSLLRQKNLM   75 (580)
Q Consensus         3 ~~L~~A~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~~~~~~~~~   75 (580)
                      ++||.|++.   |+.++++.|++.|...+..+..|.||||+|+..|+.+    +++.|++.+..         .+..+  
T Consensus        34 t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~---------~n~~~--  102 (661)
T PHA02917         34 NALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY---------SNIND--  102 (661)
T ss_pred             cHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC---------CCCCC--
Confidence            577876444   7788888888887666667778888888888877743    44556654332         11111  


Q ss_pred             CCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHH--HcCcHHHHHHHHHcCCCCCcc--
Q 045393           76 DETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAV--TNQHKRVIRILVEKDSVPSSY--  151 (580)
Q Consensus        76 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~--  151 (580)
                      ..+++|.|+.+|+.++|++|+++|++++             .+|.+|.||||.|+  .+|+.+++++|+++|++++..  
T Consensus       103 ~~~~~~~a~~~~~~e~vk~Ll~~Gadin-------------~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~  169 (661)
T PHA02917        103 FNIFSYMKSKNVDVDLIKVLVEHGFDLS-------------VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE  169 (661)
T ss_pred             cchHHHHHhhcCCHHHHHHHHHcCCCCC-------------ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc
Confidence            1245555666666666666666666654             46667777777443  456777777777777766521  


Q ss_pred             cccCC-----------CCHHHHHHH-----------cCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCH--HHH
Q 045393          152 INKAY-----------QTPLSIAID-----------ARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNY--DIM  207 (580)
Q Consensus       152 ~~~~g-----------~tpL~~A~~-----------~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~--~~~  207 (580)
                      .+..|           .||||+|+.           .++.+++++|+++|. +++..+. .|.||||.|+.+|+.  +++
T Consensus       170 ~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Ga-dvn~~d~-~G~TpLh~A~~~g~~~~eiv  247 (661)
T PHA02917        170 DDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGI-KPSSIDK-NYCTALQYYIKSSHIDIDIV  247 (661)
T ss_pred             ccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCC-CcccCCC-CCCcHHHHHHHcCCCcHHHH
Confidence            11222           477777764           346777777777773 4455554 777777777777764  577


Q ss_pred             HHHHhhCCccc---cccCCCCChHHHHHHHc---------CChHHHHHHHHhchhccc------cc------------CC
Q 045393          208 VKILGTNKELI---DRLDWHQRNPLHYAAAS---------GNVKMAQRLLEESKRLAY------KR------------DC  257 (580)
Q Consensus       208 ~~Ll~~~~~~~---~~~d~~g~t~L~~A~~~---------g~~~~v~~Ll~~~~~~~~------~~------------~~  257 (580)
                      +.|++ +.+..   ...|..|.+|+|+|+..         .+.++++.|++.|++...      ..            ..
T Consensus       248 k~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (661)
T PHA02917        248 KLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTM  326 (661)
T ss_pred             HHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHh
Confidence            77653 43321   23455566666666631         155677777777754210      00            11


Q ss_pred             CCCcHHHHHH---HcCc--HHHHHHHHHhCCCc-----------------------------cccccCCCCCHHHHHHHc
Q 045393          258 NGETPLHLAA---ENGK--LKVLKLLINKYPDA-----------------------------IEIRNNSDRSILHVAAKH  303 (580)
Q Consensus       258 ~g~tpL~~A~---~~g~--~~~v~~Ll~~~~~~-----------------------------~~~~d~~g~t~Lh~A~~~  303 (580)
                      .+.+++|.+.   ..|.  .+++++|+++|++.                             +...+.+|+||||.|++.
T Consensus       327 ~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~  406 (661)
T PHA02917        327 NSDVLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKS  406 (661)
T ss_pred             chHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHh
Confidence            2233333222   3444  34666666655541                             233455799999999854


Q ss_pred             CC-----------------------HHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCccccccccc
Q 045393          304 GN-----------------------WNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKN  360 (580)
Q Consensus       304 ~~-----------------------~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n  360 (580)
                      ++                       .+++++|+++|   +++|.+|..|+||||+|+..++.+++++|+.. |+|+|.++
T Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~G---AdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~-GAdin~~d  482 (661)
T PHA02917        407 NYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYL---KDINMIDKRGETLLHKAVRYNKQSLVSLLLES-GSDVNIRS  482 (661)
T ss_pred             cccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCC---CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHC-cCCCCCCC
Confidence            32                       56789999994   55999999999999999999999999999964 99999999


Q ss_pred             ccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhhhhc
Q 045393          361 HSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAKRAL  400 (580)
Q Consensus       361 ~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~~~  400 (580)
                      .  .|+|||++|...      ....++++.|++.|++...
T Consensus       483 ~--~G~T~L~~A~~~------~~~~~iv~~LL~~ga~i~~  514 (661)
T PHA02917        483 N--NGYTCIAIAINE------SRNIELLKMLLCHKPTLDC  514 (661)
T ss_pred             C--CCCCHHHHHHHh------CCCHHHHHHHHHcCCChhH
Confidence            9  999999999841      1346788889988876543


No 15 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=5.8e-39  Score=336.81  Aligned_cols=349  Identities=15%  Similarity=0.070  Sum_probs=270.6

Q ss_pred             HHHHHHHH--cCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCC--HHHHHHHHhhCchhHHhhhhhhcccccCCCCc
Q 045393            3 QELLEVLR--HGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRN--QQVIREILRQQDFIALRLHYSLLRQKNLMDET   78 (580)
Q Consensus         3 ~~L~~A~~--~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~t   78 (580)
                      ++||.|+.  .++.+++++|++.|...+..+..|.||||+|+..|+  .++|+.|++.|++         ++.+|..|+|
T Consensus       179 TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD---------VN~kD~~G~T  249 (764)
T PHA02716        179 GILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGD---------MDMKCVNGMS  249 (764)
T ss_pred             cHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC---------CCCCCCCCCC
Confidence            57888764  478999999999998888899999999999999995  5999999999999         8999999999


Q ss_pred             HHHHHH---HhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHH---HHHHcCcHHHHHHHHHcCCCCCccc
Q 045393           79 ALHIAA---RIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLH---NAVTNQHKRVIRILVEKDSVPSSYI  152 (580)
Q Consensus        79 pLh~Aa---~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~---~A~~~~~~~~v~~Ll~~~~~~~~~~  152 (580)
                      |||.|+   .+++.++++.|++.+....               .....++++   .|++.|+.+++++|+++|++++ ..
T Consensus       250 PLh~Ai~~a~n~~~EIvkiLie~~d~n~---------------~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN-~k  313 (764)
T PHA02716        250 PIMTYIINIDNINPEITNIYIESLDGNK---------------VKNIPMILHSYITLARNIDISVVYSFLQPGVKLH-YK  313 (764)
T ss_pred             HHHHHHHhhhccCHHHHHHHHHhccccc---------------cccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee-cc
Confidence            999885   5689999999998653311               111223344   4789999999999999999877 57


Q ss_pred             ccCCCCHHHHHHH--cCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHH--------------cCCHHHHHHHHhhCCc
Q 045393          153 NKAYQTPLSIAID--ARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVM--------------RQNYDIMVKILGTNKE  216 (580)
Q Consensus       153 ~~~g~tpL~~A~~--~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~--------------~~~~~~~~~Ll~~~~~  216 (580)
                      |..|+||||+|+.  .++.+++++|++++. +++..+. .|.||||.|+.              .++.++++.|++.+.+
T Consensus       314 D~~G~TPLH~Aaa~~~~~~eIVklLLe~GA-DIN~kD~-~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GAD  391 (764)
T PHA02716        314 DSAGRTCLHQYILRHNISTDIIKLLHEYGN-DLNEPDN-IGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGAD  391 (764)
T ss_pred             CCCCCCHHHHHHHHhCCCchHHHHHHHcCC-CCccCCC-CCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCC
Confidence            9999999999764  467899999999985 5666666 89999999875              3688999999998866


Q ss_pred             cccccCCCCChHHHHH----HHcCChHHHHHHHHhchhcccc-------cCCCCCcH--HHHHHHcCcHHH---------
Q 045393          217 LIDRLDWHQRNPLHYA----AASGNVKMAQRLLEESKRLAYK-------RDCNGETP--LHLAAENGKLKV---------  274 (580)
Q Consensus       217 ~~~~~d~~g~t~L~~A----~~~g~~~~v~~Ll~~~~~~~~~-------~~~~g~tp--L~~A~~~g~~~~---------  274 (580)
                       ++.+|..|+||||.+    ...++.+++++|++.++.....       .+..+.+|  +|.++..++.+.         
T Consensus       392 -In~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~  470 (764)
T PHA02716        392 -ITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEP  470 (764)
T ss_pred             -CCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhh
Confidence             899999999999942    3356799999999987532110       01223333  555555544332         


Q ss_pred             ---------HHHHHHhCCCccccccCCCCCHHHHHHHcCCH-----HHHHHHhcCcchhhhcccccCCCCcHHHHHHhcC
Q 045393          275 ---------LKLLINKYPDAIEIRNNSDRSILHVAAKHGNW-----NIVSFILRSPEMENLINLVDRNGNTPLHLAAMGL  340 (580)
Q Consensus       275 ---------v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~-----~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~  340 (580)
                               +..++..+.+ ++..|..|+||||+|+..|+.     +++++|++.   ++++|.+|++|+||||+|+++|
T Consensus       471 ~~~~~~~~v~~~~ii~~~n-vN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~---GADIN~~d~~G~TPLh~A~~~g  546 (764)
T PHA02716        471 YDSTKIHDVYHCAIIERYN-NAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSI---QYNINIPTKNGVTPLMLTMRNN  546 (764)
T ss_pred             ccccccchhhHHHHHhhcc-ccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhC---CCCCcccCCCCCCHHHHHHHcC
Confidence                     2333334444 677899999999999999887     455999999   4559999999999999999999


Q ss_pred             Ch-----hHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhhhh
Q 045393          341 HS-----DVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAKRA  399 (580)
Q Consensus       341 ~~-----~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~~  399 (580)
                      +.     ++++.||++ |++++..        .+.++..       ..+..+...|.++++...
T Consensus       547 ~~~~~~~eIvk~LL~~-ga~~~~~--------~l~~~~~-------~~~~~~~~ll~~~~~~~~  594 (764)
T PHA02716        547 RLSGHQWYIVKNILDK-RPNVDIV--------IIFLDKC-------YANGKFPSLLLSEDDIIK  594 (764)
T ss_pred             CccccHHHHHHHHHhc-CCCcchH--------HHHHHhh-------hhhhHHHHHHHHcchhHH
Confidence            76     999999974 7766554        3566554       345566777777776544


No 16 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=5.7e-39  Score=340.01  Aligned_cols=349  Identities=15%  Similarity=0.101  Sum_probs=273.1

Q ss_pred             HHHHHHHhhhcCcccccCCCCCchhhHHHhc---CCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHH
Q 045393           14 EYKIKQLALRQDIFSTSSPGGNAVLHMAVRF---RNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRA   90 (580)
Q Consensus        14 ~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~   90 (580)
                      ++.+++++..+...+..|.+|+||||+|+..   |+.++|++|++.|++         ++.++..|.||||.|+..|+.+
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~---------v~~~~~~g~TpL~~Aa~~g~~~   82 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTN---------PLHKNWRQLTPLEEYTNSRHVK   82 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCC---------ccccCCCCCCHHHHHHHcCChh
Confidence            5778999988887787899999999997555   889999999999998         7889999999999999999854


Q ss_pred             ----HHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHH--
Q 045393           91 ----IVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAI--  164 (580)
Q Consensus        91 ----~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~--  164 (580)
                          +++.|++.+...+             ..+  ..+++|.|+.+++.++|++|+++|++++ ..|..|.||||.++  
T Consensus        83 v~~~~~~~Ll~~~~~~n-------------~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin-~~d~~g~T~L~~~~a~  146 (661)
T PHA02917         83 VNKDIAMALLEATGYSN-------------IND--FNIFSYMKSKNVDVDLIKVLVEHGFDLS-VKCENHRSVIENYVMT  146 (661)
T ss_pred             HHHHHHHHHHhccCCCC-------------CCC--cchHHHHHhhcCCHHHHHHHHHcCCCCC-ccCCCCccHHHHHHHc
Confidence                5677877654322             111  2367888999999999999999999998 57889999999654  


Q ss_pred             HcCcHHHHHHHHhcCCCCcCCCC---C----------CCCccHHHHHHH-----------cCCHHHHHHHHhhCCccccc
Q 045393          165 DARLNDIACFIIDKSPESLNTTR---L----------PDELTLIHFVVM-----------RQNYDIMVKILGTNKELIDR  220 (580)
Q Consensus       165 ~~~~~~~v~~Ll~~~~~~~~~~~---~----------~~~~t~L~~A~~-----------~~~~~~~~~Ll~~~~~~~~~  220 (580)
                      ..|+.+++++|+++|++. +..+   .          ..+.||||.|+.           .++.++++.|++.+.+ ++.
T Consensus       147 ~~~~~eivklLi~~Ga~v-n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad-vn~  224 (661)
T PHA02917        147 DDPVPEIIDLFIENGCSV-LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK-PSS  224 (661)
T ss_pred             cCCCHHHHHHHHHcCCCc-cccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC-ccc
Confidence            578999999999999643 2221   1          123599999986           4588999999999876 899


Q ss_pred             cCCCCChHHHHHHHcCCh--HHHHHHHHhchhcc---cccCCCCCcHHHHHHHc---------CcHHHHHHHHHhCCCcc
Q 045393          221 LDWHQRNPLHYAAASGNV--KMAQRLLEESKRLA---YKRDCNGETPLHLAAEN---------GKLKVLKLLINKYPDAI  286 (580)
Q Consensus       221 ~d~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~---~~~~~~g~tpL~~A~~~---------g~~~~v~~Ll~~~~~~~  286 (580)
                      .|.+|.||||+|+..|+.  ++++.|++ |++..   ...|..|.+|+|+|+.-         .+.+++++|++.|++..
T Consensus       225 ~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~  303 (661)
T PHA02917        225 IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHG  303 (661)
T ss_pred             CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCc
Confidence            999999999999999985  79999975 76553   24566788999999842         27899999999997621


Q ss_pred             ------ccc------------cCCCCCHHHHHH---HcCC--HHHHHHHhcCcch-------------------------
Q 045393          287 ------EIR------------NNSDRSILHVAA---KHGN--WNIVSFILRSPEM-------------------------  318 (580)
Q Consensus       287 ------~~~------------d~~g~t~Lh~A~---~~~~--~~iv~~Ll~~~~~-------------------------  318 (580)
                            +..            +..+.+++|.+.   ..|.  .+++++|+++|++                         
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~  383 (661)
T PHA02917        304 IMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLK  383 (661)
T ss_pred             eeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHH
Confidence                  111            123445555444   3665  4599999988652                         


Q ss_pred             --hhhcccccCCCCcHHHHHHhcCC-----------------------hhHHHHhhcCcccccccccccCCCCCHHHHHH
Q 045393          319 --ENLINLVDRNGNTPLHLAAMGLH-----------------------SDVVFTLSRHKSVNIRAKNHSARSNTALEIAE  373 (580)
Q Consensus       319 --~~~~n~~d~~G~T~Lh~A~~~~~-----------------------~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~  373 (580)
                        +++++.+|.+|.||||.|++.+.                       .++++.|+.+ |+|+|.+|.  .|+|||++|.
T Consensus       384 ~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~-GAdIN~kd~--~G~TpLh~Aa  460 (661)
T PHA02917        384 KEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPY-LKDINMIDK--RGETLLHKAV  460 (661)
T ss_pred             hcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHC-CCCCCCCCC--CCcCHHHHHH
Confidence              23455667789999999875432                       4567888865 999999999  9999999998


Q ss_pred             HHhhCChhhHHHHHHHHHHHhhhhhhc
Q 045393          374 ITRANGKEIQKHLTLKALKTAYAKRAL  400 (580)
Q Consensus       374 ~~~~~~~~~~~~~~~~~L~~~ga~~~~  400 (580)
                      .       ....++.+.|++.|++...
T Consensus       461 ~-------~~~~~~v~~Ll~~GAdin~  480 (661)
T PHA02917        461 R-------YNKQSLVSLLLESGSDVNI  480 (661)
T ss_pred             H-------cCCHHHHHHHHHCcCCCCC
Confidence            7       4466888999999988543


No 17 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=9.2e-41  Score=355.87  Aligned_cols=366  Identities=28%  Similarity=0.334  Sum_probs=248.7

Q ss_pred             HHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIA   83 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~A   83 (580)
                      ++|.|+..|+++++++++..+...+..+-.|.||+|.|+..+..|++++|+++|.+         +..++....||+|.|
T Consensus       245 ~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~---------~~~~~~~~kt~l~~a  315 (1143)
T KOG4177|consen  245 PLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGAD---------VLAKARDDQTPLHIA  315 (1143)
T ss_pred             HHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcc---------cccccccccChhhhh
Confidence            45555555555555555555555554555555555555555555555555555555         444444555555555


Q ss_pred             HHhCCHHHHHHHHhcCcccccCCCcch-----------hh---------hhhhccCCCCCcHHHHHHHcCcHHHHHHHHH
Q 045393           84 ARIGDRAIVSEIMKYLPAVNQVGPAPV-----------LE---------SLFRMTDIEGNTPLHNAVTNQHKRVIRILVE  143 (580)
Q Consensus        84 a~~g~~~~v~~Ll~~~~~~~~~~~~~~-----------~~---------~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~  143 (580)
                      .+.|+.++++.+++.++.++.......           ..         .--...++.|.||+|.|+.+|..+++++++.
T Consensus       316 ~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~  395 (1143)
T KOG4177|consen  316 SRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLE  395 (1143)
T ss_pred             cccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhh
Confidence            555555555555554443322111000           00         0001233455556666666666666666666


Q ss_pred             cCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcC-CHHHHHHHHhhCCccccccC
Q 045393          144 KDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQ-NYDIMVKILGTNKELIDRLD  222 (580)
Q Consensus       144 ~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~-~~~~~~~Ll~~~~~~~~~~d  222 (580)
                      +|.+++ ..+..|.||+|.|+..++.++++.+++.+. +.+..+. .|+|++|.|+..+ ..+....+++.+ ..++...
T Consensus       396 ~ga~~~-~~gk~gvTplh~aa~~~~~~~v~l~l~~gA-~~~~~~~-lG~T~lhvaa~~g~~~~~~~~l~~~g-~~~n~~s  471 (1143)
T KOG4177|consen  396 AGADPN-SAGKNGVTPLHVAAHYGNPRVVKLLLKRGA-SPNAKAK-LGYTPLHVAAKKGRYLQIARLLLQYG-ADPNAVS  471 (1143)
T ss_pred             ccCCcc-cCCCCCcceeeehhhccCcceEEEEeccCC-ChhhHhh-cCCChhhhhhhcccHhhhhhhHhhcC-CCcchhc
Confidence            665543 455556666666666666666666666553 3333344 6677777777777 444444444443 4477777


Q ss_pred             CCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHH
Q 045393          223 WHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAK  302 (580)
Q Consensus       223 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~  302 (580)
                      ..|.||||.|+..|+.++++.+++.++.. +...+.+.+++|.|...+...+++.++++|++ ++.++..|.||||.||.
T Consensus       472 ~~G~T~Lhlaaq~Gh~~~~~llle~~~~~-~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~-v~~~~~r~~TpLh~A~~  549 (1143)
T KOG4177|consen  472 KQGFTPLHLAAQEGHTEVVQLLLEGGAND-NLDAKKGLTPLHLAADEDTVKVAKILLEHGAN-VDLRTGRGYTPLHVAVH  549 (1143)
T ss_pred             cccCcchhhhhccCCchHHHHhhhcCCcc-CccchhccchhhhhhhhhhHHHHHHHhhcCCc-eehhcccccchHHHHHh
Confidence            78888888888888888888888777544 45556778888888888888888888888888 88999999999999999


Q ss_pred             cCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhh
Q 045393          303 HGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEI  382 (580)
Q Consensus       303 ~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~  382 (580)
                      +|+.++|++|+++   +++++.+|+.|+||||.|+..|+.+++++|+++ |+++|..+.  +|.|||++|..       .
T Consensus       550 ~g~v~~VkfLLe~---gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~-GA~vna~d~--~g~TpL~iA~~-------l  616 (1143)
T KOG4177|consen  550 YGNVDLVKFLLEH---GADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH-GASVNAADL--DGFTPLHIAVR-------L  616 (1143)
T ss_pred             cCCchHHHHhhhC---CccccccCCCCCChhhHHHHcChHHHHHHHHHc-CCCCCcccc--cCcchhHHHHH-------h
Confidence            9999999999999   556999999999999999999999999999976 999999999  99999999998       5


Q ss_pred             HHHHHHHHHHHhhhh
Q 045393          383 QKHLTLKALKTAYAK  397 (580)
Q Consensus       383 ~~~~~~~~L~~~ga~  397 (580)
                      .+..+.+.|+..++.
T Consensus       617 g~~~~~k~l~~~~~~  631 (1143)
T KOG4177|consen  617 GYLSVVKLLKVVTAT  631 (1143)
T ss_pred             cccchhhHHHhccCc
Confidence            667778888888777


No 18 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.8e-39  Score=341.21  Aligned_cols=286  Identities=24%  Similarity=0.311  Sum_probs=212.0

Q ss_pred             cCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH-----HHH
Q 045393           11 HGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI-----AAR   85 (580)
Q Consensus        11 ~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~-----Aa~   85 (580)
                      ....+.++++++.++.....+..+.||||.|+..|+.++|++|+++|++         ++..+..+.||||.     |+.
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~---------~~~~~~~~~t~L~~~~~~~a~~   82 (480)
T PHA03100         12 IIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD---------INSSTKNNSTPLHYLSNIKYNL   82 (480)
T ss_pred             HHHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCC---------CCCccccCcCHHHHHHHHHHHh
Confidence            3445677777777766666777788888888888888888888888877         67777778888888     888


Q ss_pred             hCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHH--HcCcHHHHHHHHHcCCCCCcccccCCCCHHHHH
Q 045393           86 IGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAV--TNQHKRVIRILVEKDSVPSSYINKAYQTPLSIA  163 (580)
Q Consensus        86 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A  163 (580)
                      .|+.++++.|+++|++++             ..|..|.||||+|+  ..|+.+++++|+++|++.+ ..+..|.||||.|
T Consensus        83 ~~~~~iv~~Ll~~ga~i~-------------~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A  148 (480)
T PHA03100         83 TDVKEIVKLLLEYGANVN-------------APDNNGITPLLYAISKKSNSYSIVEYLLDNGANVN-IKNSDGENLLHLY  148 (480)
T ss_pred             hchHHHHHHHHHCCCCCC-------------CCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCC-ccCCCCCcHHHHH
Confidence            888888888888887764             36777888888888  8888888888888887665 3566667777777


Q ss_pred             HHcC--cHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHH
Q 045393          164 IDAR--LNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMA  241 (580)
Q Consensus       164 ~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v  241 (580)
                      +..+  +.+++++|++++.                                   + ++..+..|.||||+|+..|+.+++
T Consensus       149 ~~~~~~~~~iv~~Ll~~g~-----------------------------------d-in~~d~~g~tpL~~A~~~~~~~iv  192 (480)
T PHA03100        149 LESNKIDLKILKLLIDKGV-----------------------------------D-INAKNRYGYTPLHIAVEKGNIDVI  192 (480)
T ss_pred             HHcCCChHHHHHHHHHCCC-----------------------------------C-cccccCCCCCHHHHHHHhCCHHHH
Confidence            7666  6666666666653                                   2 344444556666666666666666


Q ss_pred             HHHHHhchhcccccCCCC------CcHHHHHHHcCc--HHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHh
Q 045393          242 QRLLEESKRLAYKRDCNG------ETPLHLAAENGK--LKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFIL  313 (580)
Q Consensus       242 ~~Ll~~~~~~~~~~~~~g------~tpL~~A~~~g~--~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll  313 (580)
                      ++|+++|+++ +..+..|      .||||.|+..|+  .+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+
T Consensus       193 ~~Ll~~ga~~-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~iv~~Ll  270 (480)
T PHA03100        193 KFLLDNGADI-NAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEFVKYLL  270 (480)
T ss_pred             HHHHHcCCCc-cCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            6666666555 3344444      788888888888  8888888888887 7888888888888888888888888888


Q ss_pred             cCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccc
Q 045393          314 RSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNH  361 (580)
Q Consensus       314 ~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~  361 (580)
                      +.|+   ++|.+|..|.||||+|+..++.++++.|+++ |++++..+.
T Consensus       271 ~~ga---d~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~-g~~i~~i~~  314 (480)
T PHA03100        271 DLGA---NPNLVNKYGDTPLHIAILNNNKEIFKLLLNN-GPSIKTIIE  314 (480)
T ss_pred             HcCC---CCCccCCCCCcHHHHHHHhCCHHHHHHHHhc-CCCHHHHHH
Confidence            8744   5788888888888888888888888888865 677776543


No 19 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2e-38  Score=331.17  Aligned_cols=328  Identities=19%  Similarity=0.213  Sum_probs=257.8

Q ss_pred             HHHHHHHcCCHHHHHHHhhh----cCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcH
Q 045393            4 ELLEVLRHGDEYKIKQLALR----QDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETA   79 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~----~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tp   79 (580)
                      .|+.++...+.+-+...++.    +.........+.||||+|+..|+.++|++|+++|++         ++.+|..|.||
T Consensus         3 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gad---------vn~~d~~g~Tp   73 (477)
T PHA02878          3 KLYKSMYTDNYETILKYIEYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRGHN---------VNQPDHRDLTP   73 (477)
T ss_pred             hHHHHHHhccHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHHcCCHHHHHHHHHCCCC---------CCCCCCCCCCH
Confidence            57888888887556655554    122233445688999999999999999999999998         88999999999


Q ss_pred             HHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCH
Q 045393           80 LHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTP  159 (580)
Q Consensus        80 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tp  159 (580)
                      ||+||..|+.++++.|++.+.+..               ...+.+|++.|+..++.+++++|+..+.+.....+.   ..
T Consensus        74 Lh~A~~~g~~~~v~~Ll~~~~~~~---------------~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~---~~  135 (477)
T PHA02878         74 LHIICKEPNKLGMKEMIRSINKCS---------------VFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDL---VY  135 (477)
T ss_pred             HHHHHHCccHhHHHHHHHHHhccc---------------cccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcH---HH
Confidence            999999999999999999875532               246789999999999999999999876533211110   11


Q ss_pred             HHHHHHc--CcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCC
Q 045393          160 LSIAIDA--RLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGN  237 (580)
Q Consensus       160 L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~  237 (580)
                      +......  ...+++++|++++. +++..+...|.||||.|+..|+.++++.|++.+.+ ++..|..|.||||.|+..|+
T Consensus       136 ~~~~~~~~~~~~~iv~~Ll~~ga-din~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~  213 (477)
T PHA02878        136 IDKKSKDDIIEAEITKLLLSYGA-DINMKDRHKGNTALHYATENKDQRLTELLLSYGAN-VNIPDKTNNSPLHHAVKHYN  213 (477)
T ss_pred             HhhccchhhHHHHHHHHHHHcCC-CCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCC
Confidence            1111111  23469999999985 45555552399999999999999999999998866 78889999999999999999


Q ss_pred             hHHHHHHHHhchhcccccCCCCCcHHHHHHHc-CcHHHHHHHHHhCCCccccccC-CCCCHHHHHHHcCCHHHHHHHhcC
Q 045393          238 VKMAQRLLEESKRLAYKRDCNGETPLHLAAEN-GKLKVLKLLINKYPDAIEIRNN-SDRSILHVAAKHGNWNIVSFILRS  315 (580)
Q Consensus       238 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~~~~~iv~~Ll~~  315 (580)
                      .++++.|++.|+++ +.+|..|.||||+|+.. ++.+++++|+++|++ ++.++. .|+||||+|  .++.+++++|+++
T Consensus       214 ~~iv~~Ll~~ga~i-n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gad-vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~  289 (477)
T PHA02878        214 KPIVHILLENGAST-DARDKCGNTPLHISVGYCKDYDILKLLLEHGVD-VNAKSYILGLTALHSS--IKSERKLKLLLEY  289 (477)
T ss_pred             HHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCC-CCccCCCCCCCHHHHH--ccCHHHHHHHHHC
Confidence            99999999999887 67888999999999975 689999999999999 777765 799999999  5778999999998


Q ss_pred             cchhhhcccccCCCCcHHHHHHhcC-ChhHHHHhhcC----cccccccccccCCCCCHH
Q 045393          316 PEMENLINLVDRNGNTPLHLAAMGL-HSDVVFTLSRH----KSVNIRAKNHSARSNTAL  369 (580)
Q Consensus       316 ~~~~~~~n~~d~~G~T~Lh~A~~~~-~~~~~~~Ll~~----~~~d~~~~n~~~~g~t~l  369 (580)
                         ++++|.+|.+|+||||+|+..+ ..++.+.|+.+    .+.+++.++.  .|.++-
T Consensus       290 ---gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~--~g~~~n  343 (477)
T PHA02878        290 ---GADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNS--EGFIDN  343 (477)
T ss_pred             ---CCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCc--HHHHHH
Confidence               4558999999999999999754 45666666543    3456666766  665543


No 20 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=9.9e-38  Score=325.95  Aligned_cols=274  Identities=20%  Similarity=0.227  Sum_probs=234.6

Q ss_pred             ccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q 045393           70 RQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPS  149 (580)
Q Consensus        70 ~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~  149 (580)
                      +..+..+.||||.|++.|+.++|++|+++|++++             .+|..|.||||+|+..|+.++++.|++.+....
T Consensus        31 ~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn-------------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~   97 (477)
T PHA02878         31 TSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVN-------------QPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS   97 (477)
T ss_pred             CcccccCcchHHHHHHcCCHHHHHHHHHCCCCCC-------------CCCCCCCCHHHHHHHCccHhHHHHHHHHHhccc
Confidence            4456678999999999999999999999999876             478899999999999999999999999876544


Q ss_pred             cccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcC--CHHHHHHHHhhCCccccccCCC-CC
Q 045393          150 SYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQ--NYDIMVKILGTNKELIDRLDWH-QR  226 (580)
Q Consensus       150 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~--~~~~~~~Ll~~~~~~~~~~d~~-g~  226 (580)
                      .   ..+.+|++.|+..++.++++.|+..+.......    ....+......+  +.++++.|++.+.+ ++..+.. |.
T Consensus        98 ~---~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~iv~~Ll~~gad-in~~~~~~g~  169 (477)
T PHA02878         98 V---FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTI----DLVYIDKKSKDDIIEAEITKLLLSYGAD-INMKDRHKGN  169 (477)
T ss_pred             c---ccchhhHHHHHHcCCHHHHHHHHhCcccCcccC----cHHHHhhccchhhHHHHHHHHHHHcCCC-CCccCCCCCC
Confidence            2   567899999999999999999998753221111    111111111112  34589999998876 8888888 99


Q ss_pred             hHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHc-CC
Q 045393          227 NPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKH-GN  305 (580)
Q Consensus       227 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~-~~  305 (580)
                      ||||+|+..|+.+++++|++.|+++ +.+|..|.||||.|+..|+.+++++|+++|++ ++.+|..|+||||+|+.. ++
T Consensus       170 tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~-in~~d~~g~TpLh~A~~~~~~  247 (477)
T PHA02878        170 TALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYNKPIVHILLENGAS-TDARDKCGNTPLHISVGYCKD  247 (477)
T ss_pred             CHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhcCC
Confidence            9999999999999999999999987 77899999999999999999999999999999 899999999999999976 78


Q ss_pred             HHHHHHHhcCcchhhhcccccC-CCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          306 WNIVSFILRSPEMENLINLVDR-NGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       306 ~~iv~~Ll~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      .+++++|+++|   +++|.++. .|.||||+|  .++.+++++|++. |+|+|.+|.  .|.|||++|..
T Consensus       248 ~~iv~~Ll~~g---advn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~-gadin~~d~--~g~TpL~~A~~  309 (477)
T PHA02878        248 YDILKLLLEHG---VDVNAKSYILGLTALHSS--IKSERKLKLLLEY-GADINSLNS--YKLTPLSSAVK  309 (477)
T ss_pred             HHHHHHHHHcC---CCCCccCCCCCCCHHHHH--ccCHHHHHHHHHC-CCCCCCcCC--CCCCHHHHHHH
Confidence            99999999994   45898886 899999999  5678999999965 999999999  99999999987


No 21 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=7.8e-40  Score=348.81  Aligned_cols=369  Identities=21%  Similarity=0.245  Sum_probs=228.1

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393            3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI   82 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~   82 (580)
                      +++|.|+..+.+++++.++.+|......|..|-||||.|+..|+.+++.+++.+|+.         .+..+..|+||+|.
T Consensus       211 tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~---------~~~~~vr~~tplh~  281 (1143)
T KOG4177|consen  211 TPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGAS---------VNVSTVRGETPLHM  281 (1143)
T ss_pred             CchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhcccc---------cCcccccccCcchh
Confidence            467888888888888888888877777888888888888888888888888888887         77888888888888


Q ss_pred             HHHhCCHHHHHHHHhcCcccccCCCcchh--------------------hhhhhccCCCCCcHHHHHHHcCcHHHHHHHH
Q 045393           83 AARIGDRAIVSEIMKYLPAVNQVGPAPVL--------------------ESLFRMTDIEGNTPLHNAVTNQHKRVIRILV  142 (580)
Q Consensus        83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~--------------------~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll  142 (580)
                      ||+.+..+++++|+++|+++........-                    .......+..|.||||++++.++.++..+|.
T Consensus       282 AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~  361 (1143)
T KOG4177|consen  282 AARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALL  361 (1143)
T ss_pred             hhccchhhhHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhh
Confidence            88888888888888888776532111000                    0001222333444444444444444333333


Q ss_pred             HcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccC
Q 045393          143 EKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLD  222 (580)
Q Consensus       143 ~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d  222 (580)
                      +.++... ..+..+.+|+|.|+..|..+.++.++..+.. ++..+. .|.||+|.++..++..+++.+++.+.. .+..+
T Consensus       362 ~~~~~~~-~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~-~~~~gk-~gvTplh~aa~~~~~~~v~l~l~~gA~-~~~~~  437 (1143)
T KOG4177|consen  362 EHGAQRR-QAEEKGFTPLHLAVKSGRVSVVELLLEAGAD-PNSAGK-NGVTPLHVAAHYGNPRVVKLLLKRGAS-PNAKA  437 (1143)
T ss_pred             ccccccC-cccccCCcchhhhcccCchhHHHhhhhccCC-cccCCC-CCcceeeehhhccCcceEEEEeccCCC-hhhHh
Confidence            3333222 2333444444444444444444444444422 232322 444444444444444444444443333 44444


Q ss_pred             CCCChHHHHHHHcC-ChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHH
Q 045393          223 WHQRNPLHYAAASG-NVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAA  301 (580)
Q Consensus       223 ~~g~t~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~  301 (580)
                      ..|.||+|.|+..| ..+....+++.+.++ +.....|.||||.|+..|+.++++.+++.++. .+...+.|-+++|.|.
T Consensus       438 ~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~-n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~-~~~~~~~~l~~lhla~  515 (1143)
T KOG4177|consen  438 KLGYTPLHVAAKKGRYLQIARLLLQYGADP-NAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAN-DNLDAKKGLTPLHLAA  515 (1143)
T ss_pred             hcCCChhhhhhhcccHhhhhhhHhhcCCCc-chhccccCcchhhhhccCCchHHHHhhhcCCc-cCccchhccchhhhhh
Confidence            44444444444444 344444444444443 33344444444444444444444444444433 3334444444444444


Q ss_pred             HcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChh
Q 045393          302 KHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKE  381 (580)
Q Consensus       302 ~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~  381 (580)
                      ..+...+.+.++++   +..++.++..|+||||.|+.+|+.++|++|+++ |+|++++++  .|+||||.|+.       
T Consensus       516 ~~~~v~~~~~l~~~---ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~-gAdv~ak~~--~G~TPLH~Aa~-------  582 (1143)
T KOG4177|consen  516 DEDTVKVAKILLEH---GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEH-GADVNAKDK--LGYTPLHQAAQ-------  582 (1143)
T ss_pred             hhhhHHHHHHHhhc---CCceehhcccccchHHHHHhcCCchHHHHhhhC-CccccccCC--CCCChhhHHHH-------
Confidence            44444555555544   445888999999999999999999999999976 999999998  99999999998       


Q ss_pred             hHHHHHHHHHHHhhhhhh
Q 045393          382 IQKHLTLKALKTAYAKRA  399 (580)
Q Consensus       382 ~~~~~~~~~L~~~ga~~~  399 (580)
                      ....++.++|.+.||...
T Consensus       583 ~G~~~i~~LLlk~GA~vn  600 (1143)
T KOG4177|consen  583 QGHNDIAELLLKHGASVN  600 (1143)
T ss_pred             cChHHHHHHHHHcCCCCC
Confidence            457789999999999854


No 22 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.6e-38  Score=329.36  Aligned_cols=282  Identities=23%  Similarity=0.296  Sum_probs=237.0

Q ss_pred             CCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCc
Q 045393           45 RNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNT  124 (580)
Q Consensus        45 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~t  124 (580)
                      ...++++++++.+..         .+..+..+.||||.|++.|+.++++.|+++|++++             ..+..|.|
T Consensus        13 ~~~~~~~~~~~~~~~---------~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~-------------~~~~~~~t   70 (480)
T PHA03100         13 IKVKNIKYIIMEDDL---------NDYSYKKPVLPLYLAKEARNIDVVKILLDNGADIN-------------SSTKNNST   70 (480)
T ss_pred             HHHHHHHHHHhcCcc---------chhhhcccchhhhhhhccCCHHHHHHHHHcCCCCC-------------CccccCcC
Confidence            345677777766533         56677788888888888888888888888887765             35667888


Q ss_pred             HHHH-----HHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHH--HcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHH
Q 045393          125 PLHN-----AVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAI--DARLNDIACFIIDKSPESLNTTRLPDELTLIHF  197 (580)
Q Consensus       125 pL~~-----A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~  197 (580)
                      |||+     |+..++.+++++|+++|++++ ..+..|.||||+|+  ..|+.+++++|++++.                 
T Consensus        71 ~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~-~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~-----------------  132 (480)
T PHA03100         71 PLHYLSNIKYNLTDVKEIVKLLLEYGANVN-APDNNGITPLLYAISKKSNSYSIVEYLLDNGA-----------------  132 (480)
T ss_pred             HHHHHHHHHHHhhchHHHHHHHHHCCCCCC-CCCCCCCchhhHHHhcccChHHHHHHHHHcCC-----------------
Confidence            8888     888888888888888888773 56666777777777  6666666666666552                 


Q ss_pred             HHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcC--ChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHH
Q 045393          198 VVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASG--NVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVL  275 (580)
Q Consensus       198 A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v  275 (580)
                                        + ++..+..|.||||+|+..|  +.+++++|+++|+++ +.++..|.||||+|+..|+.+++
T Consensus       133 ------------------~-~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~tpL~~A~~~~~~~iv  192 (480)
T PHA03100        133 ------------------N-VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDI-NAKNRYGYTPLHIAVEKGNIDVI  192 (480)
T ss_pred             ------------------C-CCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc-ccccCCCCCHHHHHHHhCCHHHH
Confidence                              2 4556778899999999999  999999999999987 67788999999999999999999


Q ss_pred             HHHHHhCCCccccccCCC------CCHHHHHHHcCC--HHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHH
Q 045393          276 KLLINKYPDAIEIRNNSD------RSILHVAAKHGN--WNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFT  347 (580)
Q Consensus       276 ~~Ll~~~~~~~~~~d~~g------~t~Lh~A~~~~~--~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~  347 (580)
                      ++|+++|++ ++..+..|      .||||.|+..++  .+++++|++.|   .++|.+|..|.||||+|+..|+.+++++
T Consensus       193 ~~Ll~~ga~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g---~din~~d~~g~TpL~~A~~~~~~~iv~~  268 (480)
T PHA03100        193 KFLLDNGAD-INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYG---VPINIKDVYGFTPLHYAVYNNNPEFVKY  268 (480)
T ss_pred             HHHHHcCCC-ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence            999999999 78888888      999999999999  99999999994   4599999999999999999999999999


Q ss_pred             hhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhhhhc
Q 045393          348 LSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAKRAL  400 (580)
Q Consensus       348 Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~~~  400 (580)
                      |++. |+|+|.+|.  .|.||+++|..       ....++++.|++.|++...
T Consensus       269 Ll~~-gad~n~~d~--~g~tpl~~A~~-------~~~~~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        269 LLDL-GANPNLVNK--YGDTPLHIAIL-------NNNKEIFKLLLNNGPSIKT  311 (480)
T ss_pred             HHHc-CCCCCccCC--CCCcHHHHHHH-------hCCHHHHHHHHhcCCCHHH
Confidence            9965 889999999  99999999998       4567899999999986543


No 23 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=7.5e-36  Score=312.66  Aligned_cols=276  Identities=17%  Similarity=0.229  Sum_probs=171.1

Q ss_pred             HcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhc--CCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhC
Q 045393           10 RHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRF--RNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIG   87 (580)
Q Consensus        10 ~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g   87 (580)
                      ...+.++++.|++.|...+.. .+|.||||.++..  ++.++|+.|+++|++         ++.++ .+.||||.|+.++
T Consensus        12 ~~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAd---------vn~~~-~~~tpL~~a~~~~   80 (494)
T PHA02989         12 DTVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGAD---------VNYKG-YIETPLCAVLRNR   80 (494)
T ss_pred             CcCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCC---------ccCCC-CCCCcHHHHHhcc
Confidence            357888888888888665545 5688888765543  368888888888888         66555 5688888887654


Q ss_pred             ------CHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCcccccCCCC
Q 045393           88 ------DRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTN---QHKRVIRILVEKDSVPSSYINKAYQT  158 (580)
Q Consensus        88 ------~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~g~t  158 (580)
                            +.++++.|+++|++++             .+|..|.||||.|+..   ++.+++++|+++|++++...+..|.|
T Consensus        81 ~~~~~~~~~iv~~Ll~~Gadin-------------~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~t  147 (494)
T PHA02989         81 EITSNKIKKIVKLLLKFGADIN-------------LKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYN  147 (494)
T ss_pred             CcchhhHHHHHHHHHHCCCCCC-------------CCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCC
Confidence                  4678888888888866             4677888888887765   56888888888888874467788888


Q ss_pred             HHHHHHHc--CcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcC----CHHHHHHHHhhCCccccccCCCCChHHHHH
Q 045393          159 PLSIAIDA--RLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQ----NYDIMVKILGTNKELIDRLDWHQRNPLHYA  232 (580)
Q Consensus       159 pL~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~----~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A  232 (580)
                      |||+|+..  ++.+++++|+++|.+.....+. .|.||||.|+..+    +.++++.|++.+.+ ++..+..|.|+||.+
T Consensus       148 pLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~-~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~-vn~~~~~~~t~l~~~  225 (494)
T PHA02989        148 LLHMYLESFSVKKDVIKILLSFGVNLFEKTSL-YGLTPMNIYLRNDIDVISIKVIKYLIKKGVN-IETNNNGSESVLESF  225 (494)
T ss_pred             HHHHHHHhccCCHHHHHHHHHcCCCccccccc-cCCChHHHHHhcccccccHHHHHHHHhCCCC-ccccCCccccHHHHH
Confidence            88887654  5678888888877533221222 5666666665443    55555555555544 455555555555544


Q ss_pred             HHcC------ChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCH
Q 045393          233 AASG------NVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNW  306 (580)
Q Consensus       233 ~~~g------~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~  306 (580)
                      +..+      ..+++++|+. ++++ +.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+++|+.
T Consensus       226 ~~~~~~~~~~~~~il~~l~~-~adv-n~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gad-in~~d~~G~TpL~~A~~~~~~  302 (494)
T PHA02989        226 LDNNKILSKKEFKVLNFILK-YIKI-NKKDKKGFNPLLISAKVDNYEAFNYLLKLGDD-IYNVSKDGDTVLTYAIKHGNI  302 (494)
T ss_pred             HHhchhhcccchHHHHHHHh-CCCC-CCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCH
Confidence            4322      2333443332 2333 34444444444444444444444444444444 444444444444444444444


Q ss_pred             HHHHHHhc
Q 045393          307 NIVSFILR  314 (580)
Q Consensus       307 ~iv~~Ll~  314 (580)
                      ++++.|++
T Consensus       303 ~iv~~LL~  310 (494)
T PHA02989        303 DMLNRILQ  310 (494)
T ss_pred             HHHHHHHh
Confidence            44444444


No 24 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.6e-35  Score=310.20  Aligned_cols=275  Identities=16%  Similarity=0.216  Sum_probs=235.6

Q ss_pred             cCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHh--CCHHHHHHHHhcCcccccCCCcchhhhhhhccCCC
Q 045393           44 FRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARI--GDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIE  121 (580)
Q Consensus        44 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~  121 (580)
                      ..+.++|++|+++|++         ++.+ ..|.||||.++..  ++.++|+.|+++|++++.             ++ .
T Consensus        13 ~~~~~~v~~LL~~Gad---------vN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~-------------~~-~   68 (494)
T PHA02989         13 TVDKNALEFLLRTGFD---------VNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNY-------------KG-Y   68 (494)
T ss_pred             cCcHHHHHHHHHcCCC---------cccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccC-------------CC-C
Confidence            5789999999999998         7777 5799999876654  378999999999999873             33 5


Q ss_pred             CCcHHHHHHHcC------cHHHHHHHHHcCCCCCcccccCCCCHHHHHHHc---CcHHHHHHHHhcCCCCcCCCCCCCCc
Q 045393          122 GNTPLHNAVTNQ------HKRVIRILVEKDSVPSSYINKAYQTPLSIAIDA---RLNDIACFIIDKSPESLNTTRLPDEL  192 (580)
Q Consensus       122 g~tpL~~A~~~~------~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~  192 (580)
                      +.||||.|+.++      +.+++++|+++|++++ ..+..|.||||.|+..   ++.+++++|+++|.+..+..+. .|.
T Consensus        69 ~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~-~g~  146 (494)
T PHA02989         69 IETPLCAVLRNREITSNKIKKIVKLLLKFGADIN-LKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNS-RGY  146 (494)
T ss_pred             CCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCC-CCC
Confidence            789999998754      5789999999999987 5788999999988765   6789999999999643255555 899


Q ss_pred             cHHHHHHHc--CCHHHHHHHHhhCCccccc-cCCCCChHHHHHHHcC----ChHHHHHHHHhchhcccccCCCCCcHHHH
Q 045393          193 TLIHFVVMR--QNYDIMVKILGTNKELIDR-LDWHQRNPLHYAAASG----NVKMAQRLLEESKRLAYKRDCNGETPLHL  265 (580)
Q Consensus       193 t~L~~A~~~--~~~~~~~~Ll~~~~~~~~~-~d~~g~t~L~~A~~~g----~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~  265 (580)
                      ||||.|+..  ++.++++.|++.+.+ ++. .+..|.||||.|+..+    +.+++++|+++|+++ +.++..+.||||.
T Consensus       147 tpLh~a~~~~~~~~~iv~~Ll~~Gad-i~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v-n~~~~~~~t~l~~  224 (494)
T PHA02989        147 NLLHMYLESFSVKKDVIKILLSFGVN-LFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI-ETNNNGSESVLES  224 (494)
T ss_pred             CHHHHHHHhccCCHHHHHHHHHcCCC-ccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCc-cccCCccccHHHH
Confidence            999998764  689999999999877 555 6789999999998764    899999999999988 6677789999998


Q ss_pred             HHHc------CcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhc
Q 045393          266 AAEN------GKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMG  339 (580)
Q Consensus       266 A~~~------g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~  339 (580)
                      ++..      +..+++++|++ +++ ++.+|..|+||||+|+..|+.+++++|++.|   +++|.+|..|+||||+|+..
T Consensus       225 ~~~~~~~~~~~~~~il~~l~~-~ad-vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~G---adin~~d~~G~TpL~~A~~~  299 (494)
T PHA02989        225 FLDNNKILSKKEFKVLNFILK-YIK-INKKDKKGFNPLLISAKVDNYEAFNYLLKLG---DDIYNVSKDGDTVLTYAIKH  299 (494)
T ss_pred             HHHhchhhcccchHHHHHHHh-CCC-CCCCCCCCCCHHHHHHHhcCHHHHHHHHHcC---CCccccCCCCCCHHHHHHHc
Confidence            7754      35678887665 677 8999999999999999999999999999994   55999999999999999999


Q ss_pred             CChhHHHHhhcC
Q 045393          340 LHSDVVFTLSRH  351 (580)
Q Consensus       340 ~~~~~~~~Ll~~  351 (580)
                      ++.++++.|++.
T Consensus       300 ~~~~iv~~LL~~  311 (494)
T PHA02989        300 GNIDMLNRILQL  311 (494)
T ss_pred             CCHHHHHHHHhc
Confidence            999999999975


No 25 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.4e-35  Score=279.28  Aligned_cols=232  Identities=13%  Similarity=0.110  Sum_probs=198.7

Q ss_pred             hCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHH
Q 045393           86 IGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAID  165 (580)
Q Consensus        86 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~  165 (580)
                      .++.+++++|+++|++               .+|.+|.||||+|+..|+.+++++|++.|++.+.   .++.||||+|+.
T Consensus         9 ~~~~~~~~~Lis~~a~---------------~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~---~d~~TpLh~Aa~   70 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF---------------KADVHGHSALYYAIADNNVRLVCTLLNAGALKNL---LENEFPLHQAAT   70 (284)
T ss_pred             cCHHHHHHHHHhCCCC---------------CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC---CCCCCHHHHHHH
Confidence            4678999999998875               3788999999999999999999999999987753   246899999999


Q ss_pred             cCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCC-ChHHHHHHHcCChHHHHHH
Q 045393          166 ARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQ-RNPLHYAAASGNVKMAQRL  244 (580)
Q Consensus       166 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g-~t~L~~A~~~g~~~~v~~L  244 (580)
                      .|+.+++++|++++. +.+..+. .|.||||.|+..|+.++++.|++.+.+ ++..+..| .||||+|+..|+.+++++|
T Consensus        71 ~g~~eiV~lLL~~Ga-dvn~~d~-~G~TpLh~Aa~~g~~eivk~Ll~~gad-in~~~~~g~~TpL~~Aa~~g~~eivk~L  147 (284)
T PHA02791         71 LEDTKIVKILLFSGM-DDSQFDD-KGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYF  147 (284)
T ss_pred             CCCHHHHHHHHHCCC-CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccCCCCCcHHHHHHHHcCCHHHHHHH
Confidence            999999999999884 4455555 899999999999999999999998876 67777777 4899999999999999999


Q ss_pred             HHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCH-HHHHHHcCCHHHHHHHhcCcchhhhcc
Q 045393          245 LEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSI-LHVAAKHGNWNIVSFILRSPEMENLIN  323 (580)
Q Consensus       245 l~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~~~~~iv~~Ll~~~~~~~~~n  323 (580)
                      ++++++...  ...|.||||+|+..|+.+++++|+++|++ ++.+|..|.|| ||+|+.+|+.+++++|+++   ++++|
T Consensus       148 L~~~~~~~d--~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd-~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~---Ga~in  221 (284)
T PHA02791        148 LSEIPSTFD--LAILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDLEMLQALFKY---DINIY  221 (284)
T ss_pred             HhcCCcccc--cccCccHHHHHHHcCCHHHHHHHHHCCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHC---CCCCc
Confidence            998754321  13589999999999999999999999998 88899999977 9999999999999999998   45589


Q ss_pred             cccCCCCcHHHHHHhcCChhHHHHhhcC
Q 045393          324 LVDRNGNTPLHLAAMGLHSDVVFTLSRH  351 (580)
Q Consensus       324 ~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~  351 (580)
                      .+|..| |+|      ++.|++++||++
T Consensus       222 ~~~~~~-~~l------~~~e~~~~ll~~  242 (284)
T PHA02791        222 SVNLEN-VLL------DDAEIAKMIIEK  242 (284)
T ss_pred             cCcccC-ccC------CCHHHHHHHHHh
Confidence            998854 666      777999999975


No 26 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.3e-35  Score=279.37  Aligned_cols=231  Identities=20%  Similarity=0.184  Sum_probs=139.8

Q ss_pred             CCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHH
Q 045393           12 GDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAI   91 (580)
Q Consensus        12 g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~   91 (580)
                      ++.++++.|++.+.  ...|.+|.||||+|+..|+.++++.|++.|++         ++.+  +|+||||+|+..|+.++
T Consensus        10 ~~~~~~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~---------~n~~--d~~TpLh~Aa~~g~~ei   76 (284)
T PHA02791         10 KSKQLKSFLSSKDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGAL---------KNLL--ENEFPLHQAATLEDTKI   76 (284)
T ss_pred             CHHHHHHHHHhCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCC---------CcCC--CCCCHHHHHHHCCCHHH
Confidence            45555555555433  12455556666666666666666666655554         2222  24566666666666666


Q ss_pred             HHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCC-CCHHHHHHHcCcHH
Q 045393           92 VSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAY-QTPLSIAIDARLND  170 (580)
Q Consensus        92 v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g-~tpL~~A~~~~~~~  170 (580)
                      ++.|++.|++++             .+|..|.||||+|+..|+.+++++|+++|++.+. .+..| .||||+|+..|+.+
T Consensus        77 V~lLL~~Gadvn-------------~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~-~~~~g~~TpL~~Aa~~g~~e  142 (284)
T PHA02791         77 VKILLFSGMDDS-------------QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF-YGKTGWKTSFYHAVMLNDVS  142 (284)
T ss_pred             HHHHHHCCCCCC-------------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cCCCCCcHHHHHHHHcCCHH
Confidence            666665555543             2455556666666666666666666655555442 23333 34555555555555


Q ss_pred             HHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchh
Q 045393          171 IACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKR  250 (580)
Q Consensus       171 ~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~  250 (580)
                      ++++|+++                                   ++...+.  ..|.||||+|+..|+.++++.|+++|++
T Consensus       143 ivk~LL~~-----------------------------------~~~~~d~--~~g~TpLh~Aa~~g~~eiv~lLL~~gAd  185 (284)
T PHA02791        143 IVSYFLSE-----------------------------------IPSTFDL--AILLSCIHITIKNGHVDMMILLLDYMTS  185 (284)
T ss_pred             HHHHHHhc-----------------------------------CCccccc--ccCccHHHHHHHcCCHHHHHHHHHCCCC
Confidence            55555544                                   3221110  2367888888888888888888888877


Q ss_pred             cccccCCCCCcH-HHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcC
Q 045393          251 LAYKRDCNGETP-LHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRS  315 (580)
Q Consensus       251 ~~~~~~~~g~tp-L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  315 (580)
                      + +.++..|.|| ||+|+..|+.+++++|+++|++ ++.+|..| ++|      ++.|++++|+++
T Consensus       186 ~-n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~-in~~~~~~-~~l------~~~e~~~~ll~~  242 (284)
T PHA02791        186 T-NTNNSLLFIPDIKLAIDNKDLEMLQALFKYDIN-IYSVNLEN-VLL------DDAEIAKMIIEK  242 (284)
T ss_pred             C-CcccCCCCChHHHHHHHcCCHHHHHHHHHCCCC-CccCcccC-ccC------CCHHHHHHHHHh
Confidence            6 5667777765 8888888888888888888888 67777744 555      777888888876


No 27 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.4e-34  Score=297.59  Aligned_cols=245  Identities=18%  Similarity=0.209  Sum_probs=220.8

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHc
Q 045393          122 GNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMR  201 (580)
Q Consensus       122 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~  201 (580)
                      .+++||.|++.|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++++.. ++.... .+.+|||.|+..
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~-~~~t~L~~A~~~   78 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPN-FEIYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYP-DIESELHDAVEE   78 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCC-CcccHHHHHHHC
Confidence            5789999999999999999999999887 4677899999999999999999999999853 444434 789999999999


Q ss_pred             CCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 045393          202 QNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINK  281 (580)
Q Consensus       202 ~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  281 (580)
                      |+.+.++.|++.+....+..+.+|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|+++
T Consensus        79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~-~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~  157 (413)
T PHA02875         79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGDIKGIELLIDH  157 (413)
T ss_pred             CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            99999999999988766677888999999999999999999999999988 77888999999999999999999999999


Q ss_pred             CCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCC-cHHHHHHhcCChhHHHHhhcCccccccccc
Q 045393          282 YPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGN-TPLHLAAMGLHSDVVFTLSRHKSVNIRAKN  360 (580)
Q Consensus       282 ~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~-T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n  360 (580)
                      +++ ++.+|..|+||||+|+..|+.+++++|+++|.   +++..+..|. ||+|+|+..++.+++++|+++ |+|+|..+
T Consensus       158 g~~-~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga---~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~-gad~n~~~  232 (413)
T PHA02875        158 KAC-LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGA---NIDYFGKNGCVAALCYAIENNKIDIVRLFIKR-GADCNIMF  232 (413)
T ss_pred             CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC---CCCcCCCCCCchHHHHHHHcCCHHHHHHHHHC-CcCcchHh
Confidence            998 89999999999999999999999999999954   4888888875 899999999999999999965 99999763


Q ss_pred             c-cCCCCCHHHHHHHH
Q 045393          361 H-SARSNTALEIAEIT  375 (580)
Q Consensus       361 ~-~~~g~t~l~~a~~~  375 (580)
                      . ..++.||++++...
T Consensus       233 ~~~~~~~t~l~~~~~~  248 (413)
T PHA02875        233 MIEGEECTILDMICNM  248 (413)
T ss_pred             hcCCCchHHHHHHHhh
Confidence            2 22799999988753


No 28 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.1e-34  Score=298.44  Aligned_cols=256  Identities=20%  Similarity=0.286  Sum_probs=225.9

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccC
Q 045393           76 DETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKA  155 (580)
Q Consensus        76 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  155 (580)
                      .+++||.|++.|+.+++++|+++|++++             .++..|.||||+|+..|+.+++++|+++|+++. ..+..
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n-------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~   67 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPN-------------FEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD-VKYPD   67 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCC-------------ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-ccCCC
Confidence            5799999999999999999999999876             467789999999999999999999999999776 45678


Q ss_pred             CCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHc
Q 045393          156 YQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAAS  235 (580)
Q Consensus       156 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~  235 (580)
                      +.||||.|+..|+.+++++|++.+.......+. .|.||||.|+..|+.++++.|++.+.+ ++.++..|.||||+|+..
T Consensus        68 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~tpL~~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~  145 (413)
T PHA02875         68 IESELHDAVEEGDVKAVEELLDLGKFADDVFYK-DGMTPLHLATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMM  145 (413)
T ss_pred             cccHHHHHHHCCCHHHHHHHHHcCCcccccccC-CCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHc
Confidence            899999999999999999999998655444444 799999999999999999999999876 888999999999999999


Q ss_pred             CChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCC-CCHHHHHHHcCCHHHHHHHhc
Q 045393          236 GNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSD-RSILHVAAKHGNWNIVSFILR  314 (580)
Q Consensus       236 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g-~t~Lh~A~~~~~~~iv~~Ll~  314 (580)
                      |+.+++++|+++|++. +.+|..|.||||+|+..|+.+++++|+++|++ ++..+..| .||+|+|+..|+.+++++|++
T Consensus       146 ~~~~~v~~Ll~~g~~~-~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~-~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~  223 (413)
T PHA02875        146 GDIKGIELLIDHKACL-DIEDCCGCTPLIIAMAKGDIAICKMLLDSGAN-IDYFGKNGCVAALCYAIENNKIDIVRLFIK  223 (413)
T ss_pred             CCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCcCCCCCCchHHHHHHHcCCHHHHHHHHH
Confidence            9999999999999987 77899999999999999999999999999999 77788777 589999999999999999999


Q ss_pred             CcchhhhcccccCCCCcHHHHHHhcC---ChhHHHHhh
Q 045393          315 SPEMENLINLVDRNGNTPLHLAAMGL---HSDVVFTLS  349 (580)
Q Consensus       315 ~~~~~~~~n~~d~~G~T~Lh~A~~~~---~~~~~~~Ll  349 (580)
                      +|.+....+..+..|.|||+.+....   ..+.++.++
T Consensus       224 ~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li  261 (413)
T PHA02875        224 RGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALI  261 (413)
T ss_pred             CCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence            97664444456888999999876532   344454444


No 29 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=5.4e-35  Score=275.64  Aligned_cols=223  Identities=22%  Similarity=0.296  Sum_probs=188.3

Q ss_pred             HHHHHHcCCHHHHHHHhhhcC---c--ccccCCCCCchhhHHHhcCCHHHHHHHHhhC-chhHHhhhhhhcccccCCCCc
Q 045393            5 LLEVLRHGDEYKIKQLALRQD---I--FSTSSPGGNAVLHMAVRFRNQQVIREILRQQ-DFIALRLHYSLLRQKNLMDET   78 (580)
Q Consensus         5 L~~A~~~g~~~~~~~ll~~~~---~--~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~g~t   78 (580)
                      .+.|++.|++..++.|+.+..   +  ......+|.|||-.||++||.++|++|+++. ++++....- -.+-.+..|-+
T Consensus         8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV-~FDge~Iegap   86 (615)
T KOG0508|consen    8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSV-RFDGETIEGAP   86 (615)
T ss_pred             HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceE-EeCCcccCCCc
Confidence            348999999999999987632   1  2225678999999999999999999999954 332111110 12334567889


Q ss_pred             HHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCC
Q 045393           79 ALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQT  158 (580)
Q Consensus        79 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t  158 (580)
                      ||..|+..||.++|+.|+++|+++|.             ......|||-.||..|+.++||+|+++|+++. ..|..|.|
T Consensus        87 pLWaAsaAGHl~vVk~L~~~ga~VN~-------------tT~TNStPLraACfDG~leivKyLvE~gad~~-IanrhGhT  152 (615)
T KOG0508|consen   87 PLWAASAAGHLEVVKLLLRRGASVND-------------TTRTNSTPLRAACFDGHLEIVKYLVEHGADPE-IANRHGHT  152 (615)
T ss_pred             hhhHHhccCcHHHHHHHHHhcCcccc-------------ccccCCccHHHHHhcchhHHHHHHHHcCCCCc-ccccCCCe
Confidence            99999999999999999999999874             44566799999999999999999999999997 78999999


Q ss_pred             HHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCh
Q 045393          159 PLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNV  238 (580)
Q Consensus       159 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~  238 (580)
                      .||+|+.+|+.+++++|++.+ .+++.++. .|.|+||.++..|+.++++.|+.++..  -.+|..|.|||..|+..|+.
T Consensus       153 cLmIa~ykGh~~I~qyLle~g-ADvn~ks~-kGNTALH~caEsG~vdivq~Ll~~ga~--i~~d~~GmtPL~~Aa~tG~~  228 (615)
T KOG0508|consen  153 CLMIACYKGHVDIAQYLLEQG-ADVNAKSY-KGNTALHDCAESGSVDIVQLLLKHGAK--IDVDGHGMTPLLLAAVTGHT  228 (615)
T ss_pred             eEEeeeccCchHHHHHHHHhC-CCcchhcc-cCchHHHhhhhcccHHHHHHHHhCCce--eeecCCCCchHHHHhhhcch
Confidence            999999999999999999999 45666666 999999999999999999999999875  34577799999999999999


Q ss_pred             HHHHHHHH
Q 045393          239 KMAQRLLE  246 (580)
Q Consensus       239 ~~v~~Ll~  246 (580)
                      ++|++|++
T Consensus       229 ~iVe~L~~  236 (615)
T KOG0508|consen  229 DIVERLLQ  236 (615)
T ss_pred             HHHHHHhc
Confidence            99999994


No 30 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=1.7e-35  Score=244.35  Aligned_cols=208  Identities=27%  Similarity=0.341  Sum_probs=171.1

Q ss_pred             CHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCC
Q 045393          158 TPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGN  237 (580)
Q Consensus       158 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~  237 (580)
                      ++.+.++......-++.+++..+.+++..+..+|+||||.|+..|+.+++.+|+......++..|..|+||||.|+..|+
T Consensus         5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~   84 (226)
T KOG4412|consen    5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN   84 (226)
T ss_pred             chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc
Confidence            44555555555555666666655555555544677777777777777777777765555577788899999999999999


Q ss_pred             hHHHHHHHHh-chhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCc
Q 045393          238 VKMAQRLLEE-SKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSP  316 (580)
Q Consensus       238 ~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~  316 (580)
                      .++|+.|+.+ ++++ +..++.|.||||+|+.+|+.+++++|+++|+. ++.+|..|+||||-|+.-|+.+++++|+..+
T Consensus        85 ~evVk~Ll~r~~adv-na~tn~G~T~LHyAagK~r~eIaqlLle~ga~-i~~kD~~~qtplHRAAavGklkvie~Li~~~  162 (226)
T KOG4412|consen   85 DEVVKELLNRSGADV-NATTNGGQTCLHYAAGKGRLEIAQLLLEKGAL-IRIKDKQGQTPLHRAAAVGKLKVIEYLISQG  162 (226)
T ss_pred             HHHHHHHhcCCCCCc-ceecCCCcceehhhhcCChhhHHHHHHhcCCC-CcccccccCchhHHHHhccchhhHHHHHhcC
Confidence            9999999998 6766 78888999999999999999999999999977 8999999999999999999999999999985


Q ss_pred             chhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          317 EMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       317 ~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      +   -+|.+|..|+||||.|...|+.++...|.+. |+|.+..|+  +| ||+.++..
T Consensus       163 a---~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~-gAd~~~edk--e~-t~~~~a~~  213 (226)
T KOG4412|consen  163 A---PLNTQDKYGFTPLHHALAEGHPDVAVLLVRA-GADTDREDK--EG-TALRIACN  213 (226)
T ss_pred             C---CCCcccccCccHHHHHHhccCchHHHHHHHh-ccceeeccc--cC-chHHHHHH
Confidence            4   4999999999999999888899988888865 799999999  88 99888875


No 31 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.2e-33  Score=295.65  Aligned_cols=296  Identities=15%  Similarity=0.167  Sum_probs=188.7

Q ss_pred             HHHHHHHc---CCHHHHHHHhhhcCcccccCCCCCchhhHHHh--cCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCc
Q 045393            4 ELLEVLRH---GDEYKIKQLALRQDIFSTSSPGGNAVLHMAVR--FRNQQVIREILRQQDFIALRLHYSLLRQKNLMDET   78 (580)
Q Consensus         4 ~L~~A~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~t   78 (580)
                      +||.-+..   =+.+.++.|+..++....  ..+.|+++.+..  .++.++|++|+++|++         ++.+|..|.|
T Consensus         5 ~l~~y~~~~~~~~~~~v~~ll~~~~~~~~--~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gad---------vn~~d~~g~T   73 (489)
T PHA02798          5 NLYNYITFSDNVKLSTVKLLIKSCNPNEI--VNEYSIFQKYLQRDSPSTDIVKLFINLGAN---------VNGLDNEYST   73 (489)
T ss_pred             hhHHHeeecCcccHHHHHHHHhcCChhhh--cccchHHHHHHhCCCCCHHHHHHHHHCCCC---------CCCCCCCCCC
Confidence            44444443   357789999976544432  456777764443  4478999999999988         8888899999


Q ss_pred             HHHHHHHh-----CCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcC---cHHHHHHHHHcCCCCCc
Q 045393           79 ALHIAARI-----GDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQ---HKRVIRILVEKDSVPSS  150 (580)
Q Consensus        79 pLh~Aa~~-----g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~---~~~~v~~Ll~~~~~~~~  150 (580)
                      |||.|+.+     ++.++++.|+++|++++             .+|..|.||||+|+.++   +.+++++|+++|++++ 
T Consensus        74 pL~~~~~n~~~~~~~~~iv~~Ll~~GadiN-------------~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn-  139 (489)
T PHA02798         74 PLCTILSNIKDYKHMLDIVKILIENGADIN-------------KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTT-  139 (489)
T ss_pred             hHHHHHHhHHhHHhHHHHHHHHHHCCCCCC-------------CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc-
Confidence            99988764     66899999999998876             47888999999999875   6889999999998876 


Q ss_pred             ccccCCCCHHHHHHHcCc---HHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHc----CCHHHHHHHHhhCCccccccCC
Q 045393          151 YINKAYQTPLSIAIDARL---NDIACFIIDKSPESLNTTRLPDELTLIHFVVMR----QNYDIMVKILGTNKELIDRLDW  223 (580)
Q Consensus       151 ~~~~~g~tpL~~A~~~~~---~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~----~~~~~~~~Ll~~~~~~~~~~d~  223 (580)
                      ..|..|.||||+|+..++   .+++++|++.+.+ ++..+...|.||||.++..    ++.++++.|++++.. ++..+.
T Consensus       140 ~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-in~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~-i~~~~~  217 (489)
T PHA02798        140 LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-INTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFI-INKENK  217 (489)
T ss_pred             ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC-cccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCC-cccCCc
Confidence            578888888888888877   7888888887743 3333222455666655432    244455555544433 344444


Q ss_pred             CCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHc
Q 045393          224 HQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKH  303 (580)
Q Consensus       224 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~  303 (580)
                      .|.++++....                           .+..+...++.+++++|+. +++ ++.+|..|+||||+|+.+
T Consensus       218 ~~~~~~~~~l~---------------------------~l~~~~~~~~~~i~~~l~~-~~d-vN~~d~~G~TPL~~A~~~  268 (489)
T PHA02798        218 SHKKKFMEYLN---------------------------SLLYDNKRFKKNILDFIFS-YID-INQVDELGFNPLYYSVSH  268 (489)
T ss_pred             cccchHHHHHH---------------------------HHHhhcccchHHHHHHHHh-cCC-CCCcCcCCccHHHHHHHc
Confidence            44444331000                           0001223344555555443 344 556666666666666666


Q ss_pred             CCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccc
Q 045393          304 GNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAK  359 (580)
Q Consensus       304 ~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~  359 (580)
                      |+.+++++|++.   ++++|.+|..|+||||+|+..++.++++.|++. +++++..
T Consensus       269 ~~~~~v~~LL~~---GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~-~~~~~~i  320 (489)
T PHA02798        269 NNRKIFEYLLQL---GGDINIITELGNTCLFTAFENESKFIFNSILNK-KPNKNTI  320 (489)
T ss_pred             CcHHHHHHHHHc---CCcccccCCCCCcHHHHHHHcCcHHHHHHHHcc-CCCHHHH
Confidence            666666666665   333566666666666666666666666665533 5555543


No 32 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=2e-34  Score=238.12  Aligned_cols=211  Identities=24%  Similarity=0.309  Sum_probs=191.0

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHcCC-CCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHH
Q 045393          121 EGNTPLHNAVTNQHKRVIRILVEKDS-VPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVV  199 (580)
Q Consensus       121 ~g~tpL~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~  199 (580)
                      .+.++.+.++......-++.+++..+ .++...|.+|+||||+||+.|+.+++.+|++.....++.++. .|+||||+|+
T Consensus         2 e~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDd-aGWtPlhia~   80 (226)
T KOG4412|consen    2 EYASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDD-AGWTPLHIAA   80 (226)
T ss_pred             CccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccc-cCCchhhhhh
Confidence            35678888888888888899998887 556566679999999999999999999999866566666666 9999999999


Q ss_pred             HcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 045393          200 MRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLI  279 (580)
Q Consensus       200 ~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll  279 (580)
                      ..|+.++++.|+.+.+.+++..+..|.|+||+|+..|..+++++|+++|+.+ ..+|..|.||||.|+..|..+++++|+
T Consensus        81 s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i-~~kD~~~qtplHRAAavGklkvie~Li  159 (226)
T KOG4412|consen   81 SNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALI-RIKDKQGQTPLHRAAAVGKLKVIEYLI  159 (226)
T ss_pred             hcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCC-cccccccCchhHHHHhccchhhHHHHH
Confidence            9999999999999966679999999999999999999999999999999877 889999999999999999999999999


Q ss_pred             HhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHh
Q 045393          280 NKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAM  338 (580)
Q Consensus       280 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~  338 (580)
                      ..++. ++..|+.|+||||.|...|+.++..+|++.+   +++...|+.| ||+..|.-
T Consensus       160 ~~~a~-~n~qDk~G~TpL~~al~e~~~d~a~lLV~~g---Ad~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  160 SQGAP-LNTQDKYGFTPLHHALAEGHPDVAVLLVRAG---ADTDREDKEG-TALRIACN  213 (226)
T ss_pred             hcCCC-CCcccccCccHHHHHHhccCchHHHHHHHhc---cceeeccccC-chHHHHHH
Confidence            99988 9999999999999998889999999999995   5589999988 99887764


No 33 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.5e-33  Score=281.23  Aligned_cols=362  Identities=14%  Similarity=0.082  Sum_probs=272.5

Q ss_pred             CHHHHHHHHcCCHHHH--HHHhhhcCcccccCCCCCchhhHHHhcCC-HHHHHHHHhhCchhHHhhhhhhcccccCCCCc
Q 045393            2 DQELLEVLRHGDEYKI--KQLALRQDIFSTSSPGGNAVLHMAVRFRN-QQVIREILRQQDFIALRLHYSLLRQKNLMDET   78 (580)
Q Consensus         2 ~~~L~~A~~~g~~~~~--~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~t   78 (580)
                      |+-|+.+|+.=+++.+  +.|++.|...-. ..++.||||.-....+ ..-++.++..+..         .+..|.+|.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~n~~~~~   73 (631)
T PHA02792          4 DKILYDSCKTFNIDACSAQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSS---------VDYKNINDFD   73 (631)
T ss_pred             hhHHHhHhhccchhHHHHHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhC---------CCcCccCCcc
Confidence            4567888888877765  567888865553 5778899998876555 2233344444444         5668888999


Q ss_pred             HHHHHH-HhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHH-cCcHHHHHHHHHcCCCCC-------
Q 045393           79 ALHIAA-RIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVT-NQHKRVIRILVEKDSVPS-------  149 (580)
Q Consensus        79 pLh~Aa-~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~~~~~~-------  149 (580)
                      |+|+-+ .+|+.|+|++|+++|++++             .+++.|.||+|+|+. .++.|++++|+++|++..       
T Consensus        74 ~~~~~~s~n~~lElvk~LI~~GAdvN-------------~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~  140 (631)
T PHA02792         74 IFEYLCSDNIDIELLKLLISKGLEIN-------------SIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGY  140 (631)
T ss_pred             HHHHHHHhcccHHHHHHHHHcCCCcc-------------cccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCc
Confidence            998654 5889999999999999987             367778999999966 699999999999998631       


Q ss_pred             ----------------------------cccccCCCCHHHHHHHcC-------cHHHHHHHHhcCCCCcCCCCCCCCccH
Q 045393          150 ----------------------------SYINKAYQTPLSIAIDAR-------LNDIACFIIDKSPESLNTTRLPDELTL  194 (580)
Q Consensus       150 ----------------------------~~~~~~g~tpL~~A~~~~-------~~~~v~~Ll~~~~~~~~~~~~~~~~t~  194 (580)
                                                  +..+..|.||||+|+.++       +.|+++.|++++. .++..+. .|.||
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~-~~~~~d~-~g~t~  218 (631)
T PHA02792        141 KIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEK-EMRYYTY-REHTT  218 (631)
T ss_pred             chhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCC-CcCccCC-CCChH
Confidence                                        134566899999999999       8999999999995 4445555 79999


Q ss_pred             HHHHHHcC--CHHHHHHHHhhCCccc------------cc------cCC-------CCCh--------------------
Q 045393          195 IHFVVMRQ--NYDIMVKILGTNKELI------------DR------LDW-------HQRN--------------------  227 (580)
Q Consensus       195 L~~A~~~~--~~~~~~~Ll~~~~~~~------------~~------~d~-------~g~t--------------------  227 (580)
                      ||.|+.+.  +.|+++.|+...-...            ..      .|.       .|.+                    
T Consensus       219 l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~  298 (631)
T PHA02792        219 LYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSI  298 (631)
T ss_pred             HHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHH
Confidence            99999999  7888888876422100            00      010       0111                    


Q ss_pred             ----------HHHHHHHcC--ChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCC--
Q 045393          228 ----------PLHYAAASG--NVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSD--  293 (580)
Q Consensus       228 ----------~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g--  293 (580)
                                .||.-.+.+  +.+++++|+++|++..   ...+..+++.|+..|+.+++++|+++|++ ++.+|.+|  
T Consensus       299 ~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GAD-IN~kD~~g~~  374 (631)
T PHA02792        299 LKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNV-VVEDDDNIIN  374 (631)
T ss_pred             HHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCc-hhhhcCCCCC
Confidence                      122222333  5789999999998762   22356679999999999999999999999 88888775  


Q ss_pred             CCHHHHHHHcCCHH---HHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHH
Q 045393          294 RSILHVAAKHGNWN---IVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALE  370 (580)
Q Consensus       294 ~t~Lh~A~~~~~~~---iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~  370 (580)
                      .||||+|+.....+   ++++|+++|   +++|.+|..|.||||+|+..++.+++++|+++ |+|+|.+|.  .|+||++
T Consensus       375 ~TpLh~A~~n~~~~v~~IlklLIs~G---ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~-GADIN~kD~--~G~TpL~  448 (631)
T PHA02792        375 IMPLFPTLSIHESDVLSILKLCKPYI---DDINKIDKHGRSILYYCIESHSVSLVEWLIDN-GADINITTK--YGSTCIG  448 (631)
T ss_pred             hhHHHHHHHhccHhHHHHHHHHHhcC---CccccccccCcchHHHHHHcCCHHHHHHHHHC-CCCCCCcCC--CCCCHHH
Confidence            69999988776654   578889884   45999999999999999999999999999976 999999999  9999999


Q ss_pred             HHHHHhhCC-h--hhHHHHHHHHHHHhhhhh
Q 045393          371 IAEITRANG-K--EIQKHLTLKALKTAYAKR  398 (580)
Q Consensus       371 ~a~~~~~~~-~--~~~~~~~~~~L~~~ga~~  398 (580)
                      +|....... .  ......+++.|++.|.+.
T Consensus       449 ~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i  479 (631)
T PHA02792        449 ICVILAHACIPEIAELYIKILEIILSKLPTI  479 (631)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence            997622111 1  112345677888777554


No 34 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.1e-33  Score=291.65  Aligned_cols=263  Identities=20%  Similarity=0.185  Sum_probs=200.3

Q ss_pred             CHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHH--hCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCC
Q 045393           46 NQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAAR--IGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGN  123 (580)
Q Consensus        46 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~--~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~  123 (580)
                      ..+.|+.|++.+..          +.. ..+.|+++.+..  .++.+++++|+++|++++             .+|..|.
T Consensus        17 ~~~~v~~ll~~~~~----------~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn-------------~~d~~g~   72 (489)
T PHA02798         17 KLSTVKLLIKSCNP----------NEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVN-------------GLDNEYS   72 (489)
T ss_pred             cHHHHHHHHhcCCh----------hhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCC-------------CCCCCCC
Confidence            36788888876543          111 345666664443  347888888888888866             3677888


Q ss_pred             cHHHHHHHc-----CcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHH
Q 045393          124 TPLHNAVTN-----QHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFV  198 (580)
Q Consensus       124 tpL~~A~~~-----~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A  198 (580)
                      ||||.|+.+     ++.+++++|+++|++++ ..+..|.||||+|+.++..                             
T Consensus        73 TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~-----------------------------  122 (489)
T PHA02798         73 TPLCTILSNIKDYKHMLDIVKILIENGADIN-KKNSDGETPLYCLLSNGYI-----------------------------  122 (489)
T ss_pred             ChHHHHHHhHHhHHhHHHHHHHHHHCCCCCC-CCCCCcCcHHHHHHHcCCc-----------------------------
Confidence            888887754     55677777777777665 3566666666666654310                             


Q ss_pred             HHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCC---hHHHHHHHHhchhcccccCCCCCcHHHHHHHc----Cc
Q 045393          199 VMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGN---VKMAQRLLEESKRLAYKRDCNGETPLHLAAEN----GK  271 (580)
Q Consensus       199 ~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~----g~  271 (580)
                         ++.++++.|++.+.+ ++..|..|.||||+|++.++   .+++++|++.|+++....+..|.||||.++..    ++
T Consensus       123 ---~~~~iv~~Ll~~Gad-vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~  198 (489)
T PHA02798        123 ---NNLEILLFMIENGAD-TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRID  198 (489)
T ss_pred             ---ChHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCC
Confidence               134555555555544 67778889999999998887   89999999999888444456789999988764    47


Q ss_pred             HHHHHHHHHhCCCccccccCCCCCHHH-------HHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhH
Q 045393          272 LKVLKLLINKYPDAIEIRNNSDRSILH-------VAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDV  344 (580)
Q Consensus       272 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh-------~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~  344 (580)
                      .+++++|+++|++ ++..+..|+++++       .+...++.+++++|+.    +.++|.+|..|+||||+|+..++.++
T Consensus       199 ~~ivk~Li~~Ga~-i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~----~~dvN~~d~~G~TPL~~A~~~~~~~~  273 (489)
T PHA02798        199 ADILKLFVDNGFI-INKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS----YIDINQVDELGFNPLYYSVSHNNRKI  273 (489)
T ss_pred             HHHHHHHHHCCCC-cccCCccccchHHHHHHHHHhhcccchHHHHHHHHh----cCCCCCcCcCCccHHHHHHHcCcHHH
Confidence            9999999999998 7888888899877       2445677889998876    35699999999999999999999999


Q ss_pred             HHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          345 VFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       345 ~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      +++|++. |+|+|.+|.  .|+|||++|..
T Consensus       274 v~~LL~~-GAdin~~d~--~G~TpL~~A~~  300 (489)
T PHA02798        274 FEYLLQL-GGDINIITE--LGNTCLFTAFE  300 (489)
T ss_pred             HHHHHHc-CCcccccCC--CCCcHHHHHHH
Confidence            9999975 999999999  99999999986


No 35 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.4e-31  Score=272.66  Aligned_cols=309  Identities=13%  Similarity=0.096  Sum_probs=238.1

Q ss_pred             ccCCCCCchhhH-HHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHH-hCCHHHHHHHHhcCccccc--
Q 045393           29 TSSPGGNAVLHM-AVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAAR-IGDRAIVSEIMKYLPAVNQ--  104 (580)
Q Consensus        29 ~~~~~g~t~Lh~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~-~g~~~~v~~Ll~~~~~~~~--  104 (580)
                      ..+.+|.+++|+ |...|+.|+|++|+++|++         ++.++..|.||+|+|+. .++.|++++|+++|++...  
T Consensus        66 ~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAd---------vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~  136 (631)
T PHA02792         66 YKNINDFDIFEYLCSDNIDIELLKLLISKGLE---------INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNI  136 (631)
T ss_pred             cCccCCccHHHHHHHhcccHHHHHHHHHcCCC---------cccccCCCCcceeEeecCCCChHHHHHHHHCCCCccccc
Confidence            455678889986 5567899999999999998         88888889999999976 6999999999999987432  


Q ss_pred             -CCCcch--------------------hhhhhhccCCCCCcHHHHHHHcC-------cHHHHHHHHHcCCCCCcccccCC
Q 045393          105 -VGPAPV--------------------LESLFRMTDIEGNTPLHNAVTNQ-------HKRVIRILVEKDSVPSSYINKAY  156 (580)
Q Consensus       105 -~~~~~~--------------------~~~~l~~~d~~g~tpL~~A~~~~-------~~~~v~~Ll~~~~~~~~~~~~~g  156 (580)
                       .|..+.                    ....++..|..|.||||+|+.++       +.|++++|+++|++++. .|..|
T Consensus       137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~-~d~~g  215 (631)
T PHA02792        137 QYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY-YTYRE  215 (631)
T ss_pred             ccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc-cCCCC
Confidence             122111                    12345678889999999999999       89999999999999885 67789


Q ss_pred             CCHHHHHHHcC--cHHHHHHHHhcCCCCcCC--------------CCCC----------CCc------------------
Q 045393          157 QTPLSIAIDAR--LNDIACFIIDKSPESLNT--------------TRLP----------DEL------------------  192 (580)
Q Consensus       157 ~tpL~~A~~~~--~~~~v~~Ll~~~~~~~~~--------------~~~~----------~~~------------------  192 (580)
                      .||||+|+.+.  ..|+++.|++..-.....              .+..          .|.                  
T Consensus       216 ~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~  295 (631)
T PHA02792        216 HTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIII  295 (631)
T ss_pred             ChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHH
Confidence            99999999999  889999998743210000              0000          000                  


Q ss_pred             ------------cHHHHHHHcC--CHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCC
Q 045393          193 ------------TLIHFVVMRQ--NYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCN  258 (580)
Q Consensus       193 ------------t~L~~A~~~~--~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~  258 (580)
                                  -.||.-...+  +.++++.+++.+....   ......+++.|+..|+.+++++|+++|+++ +.+|.+
T Consensus       296 ~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GADI-N~kD~~  371 (631)
T PHA02792        296 SSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNVV-VEDDDN  371 (631)
T ss_pred             HHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCch-hhhcCC
Confidence                        1123333333  5678888888887632   223566799999999999999999999998 566666


Q ss_pred             C--CcHHHHHHHcCcH---HHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHH
Q 045393          259 G--ETPLHLAAENGKL---KVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPL  333 (580)
Q Consensus       259 g--~tpL~~A~~~g~~---~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~L  333 (580)
                      |  .||||.|+.....   +++++|+++|++ ++.+|..|+||||+|+..++.+++++|+++|   +++|.+|..|+|||
T Consensus       372 g~~~TpLh~A~~n~~~~v~~IlklLIs~GAD-IN~kD~~G~TPLh~Aa~~~n~eivelLLs~G---ADIN~kD~~G~TpL  447 (631)
T PHA02792        372 IINIMPLFPTLSIHESDVLSILKLCKPYIDD-INKIDKHGRSILYYCIESHSVSLVEWLIDNG---ADINITTKYGSTCI  447 (631)
T ss_pred             CCChhHHHHHHHhccHhHHHHHHHHHhcCCc-cccccccCcchHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHH
Confidence            4  6999998876654   468899999999 8999999999999999999999999999994   55999999999999


Q ss_pred             HHHHh---cCC-------hhHHHHhhcCccccc
Q 045393          334 HLAAM---GLH-------SDVVFTLSRHKSVNI  356 (580)
Q Consensus       334 h~A~~---~~~-------~~~~~~Ll~~~~~d~  356 (580)
                      |+|+.   .++       .++++.|+++ |.++
T Consensus       448 ~~A~~~~~~~~~~i~~~~~~il~lLLs~-~p~i  479 (631)
T PHA02792        448 GICVILAHACIPEIAELYIKILEIILSK-LPTI  479 (631)
T ss_pred             HHHHHHHhcccHHHHHHHHHHHHHHHhc-CCCh
Confidence            99976   222       3456777754 4443


No 36 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.98  E-value=5.2e-31  Score=248.82  Aligned_cols=184  Identities=18%  Similarity=0.197  Sum_probs=160.9

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhc-Cc--------ccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhccccc
Q 045393            3 QELLEVLRHGDEYKIKQLALRQ-DI--------FSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKN   73 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~-~~--------~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~   73 (580)
                      ++|..|+++|+.+++++|++.. ..        .+....+|-+||-.|+..||.++||.|+++|++         +|...
T Consensus        44 tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~---------VN~tT  114 (615)
T KOG0508|consen   44 TPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGAS---------VNDTT  114 (615)
T ss_pred             CceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCc---------ccccc
Confidence            4678899999999999999953 11        222456788999999999999999999999988         88888


Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Q 045393           74 LMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYIN  153 (580)
Q Consensus        74 ~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~  153 (580)
                      ....|||.-||..|+.++|++|+++|+|++             ..|..|.|.||+||..||.+++++|++.|++++ .++
T Consensus       115 ~TNStPLraACfDG~leivKyLvE~gad~~-------------IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn-~ks  180 (615)
T KOG0508|consen  115 RTNSTPLRAACFDGHLEIVKYLVEHGADPE-------------IANRHGHTCLMIACYKGHVDIAQYLLEQGADVN-AKS  180 (615)
T ss_pred             ccCCccHHHHHhcchhHHHHHHHHcCCCCc-------------ccccCCCeeEEeeeccCchHHHHHHHHhCCCcc-hhc
Confidence            888899999999999999999999999976             589999999999999999999999999999998 588


Q ss_pred             cCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHh
Q 045393          154 KAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILG  212 (580)
Q Consensus       154 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~  212 (580)
                      ..|+|+||.|+++|+.|++++|+.++.. ... +. .|.|||..|...|..++++.|+.
T Consensus       181 ~kGNTALH~caEsG~vdivq~Ll~~ga~-i~~-d~-~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  181 YKGNTALHDCAESGSVDIVQLLLKHGAK-IDV-DG-HGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             ccCchHHHhhhhcccHHHHHHHHhCCce-eee-cC-CCCchHHHHhhhcchHHHHHHhc
Confidence            9999999999999999999999999853 222 22 69999999999999999999985


No 37 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=2.8e-30  Score=254.95  Aligned_cols=205  Identities=26%  Similarity=0.392  Sum_probs=166.5

Q ss_pred             HHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccC-CCCChHHHHHHHcCCh
Q 045393          160 LSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLD-WHQRNPLHYAAASGNV  238 (580)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d-~~g~t~L~~A~~~g~~  238 (580)
                      +..|++.|..+-++.+++....+.+..|. +|.++||.|+.+++.+++++|++++++ +|..+ ..+.||||+|+++|+.
T Consensus        48 ~v~A~q~G~l~~v~~lve~~g~~v~~~D~-~g~tlLHWAAiNNrl~v~r~li~~gad-vn~~gG~l~stPLHWAar~G~~  125 (600)
T KOG0509|consen   48 IVKATQYGELETVKELVESEGESVNNPDR-EGVTLLHWAAINNRLDVARYLISHGAD-VNAIGGVLGSTPLHWAARNGHI  125 (600)
T ss_pred             hhhHhhcchHHHHHHHHhhcCcCCCCCCc-CCccceeHHHHcCcHHHHHHHHHcCCC-ccccCCCCCCCcchHHHHcCcH
Confidence            33444444444444444442233333333 555555555555566666666655555 55554 5688999999999999


Q ss_pred             HHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcch
Q 045393          239 KMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEM  318 (580)
Q Consensus       239 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~  318 (580)
                      .+++.|+++|+++ +.+|.+|.+|||.|++.|+.-++-+|+.++.+ ++.+|.+|+||||+|+.+|....++.|++-+. 
T Consensus       126 ~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~~~~vayll~~~~d-~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a-  202 (600)
T KOG0509|consen  126 SVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGHTALVAYLLSKGAD-IDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA-  202 (600)
T ss_pred             HHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCchHHHHHHHHhccc-CCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc-
Confidence            9999999999999 78899999999999999999999999999988 99999999999999999999988999998844 


Q ss_pred             hhhccccc-CCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          319 ENLINLVD-RNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       319 ~~~~n~~d-~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                        .++.+| +.|+||||+|+..|+..+++ |+.+.|++.+.+|.  +|+||+++|++
T Consensus       203 --~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~--~g~tp~~LA~~  254 (600)
T KOG0509|consen  203 --SLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNT--NGKTPFDLAQE  254 (600)
T ss_pred             --cccccccccCCchHHHHHhcCCcceEe-hhhhcCCccccccc--CCCCHHHHHHH
Confidence              478877 99999999999999999999 77788999999999  99999999987


No 38 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96  E-value=2.1e-29  Score=248.80  Aligned_cols=206  Identities=20%  Similarity=0.235  Sum_probs=117.4

Q ss_pred             HHHHHHcCCHHHHHHHhhh-cCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhccccc-CCCCcHHHH
Q 045393            5 LLEVLRHGDEYKIKQLALR-QDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKN-LMDETALHI   82 (580)
Q Consensus         5 L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~-~~g~tpLh~   82 (580)
                      ++.|++.|+++.++.+++. +...+..|.+|.|+||+||.+++.+++++|+++|++         +|+.. .-+.||||+
T Consensus        48 ~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gad---------vn~~gG~l~stPLHW  118 (600)
T KOG0509|consen   48 IVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGAD---------VNAIGGVLGSTPLHW  118 (600)
T ss_pred             hhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCC---------ccccCCCCCCCcchH
Confidence            4556666666666666665 444444555666666666666666666666666665         44444 445566666


Q ss_pred             HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHH
Q 045393           83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSI  162 (580)
Q Consensus        83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~  162 (580)
                      |+++|+..+|+.|+++|++++             .+|.+|.||||.|++.++.-.|-+|+.++++.+ .+|.+|+||||+
T Consensus       119 Aar~G~~~vv~lLlqhGAdpt-------------~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d-~~D~~grTpLmw  184 (600)
T KOG0509|consen  119 AARNGHISVVDLLLQHGADPT-------------LKDKQGLTPLHLAAQFGHTALVAYLLSKGADID-LRDNNGRTPLMW  184 (600)
T ss_pred             HHHcCcHHHHHHHHHcCCCCc-------------eecCCCCcHHHHHHHhCchHHHHHHHHhcccCC-CcCCCCCCHHHH
Confidence            666666666666666666654             356666666666666666666666666665443 456666666666


Q ss_pred             HHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHc
Q 045393          163 AIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAAS  235 (580)
Q Consensus       163 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~  235 (580)
                      |+.+|....+..|+..++. +...+...|.||||.|+..|+...+. |+.+++...+..|.+|.||+.+|...
T Consensus       185 Aaykg~~~~v~~LL~f~a~-~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  185 AAYKGFALFVRRLLKFGAS-LLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             HHHhcccHHHHHHHHhccc-ccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence            6666655555555555532 22223225555555555555555555 44444444555555555555555544


No 39 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.95  E-value=2.4e-28  Score=250.58  Aligned_cols=315  Identities=19%  Similarity=0.226  Sum_probs=255.5

Q ss_pred             cCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcc
Q 045393           30 SSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAP  109 (580)
Q Consensus        30 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~  109 (580)
                      ...+-.|+|-.||..|+.|+|+.|+.+|++         +..+|..|.+||..|+-.||..+|+.|+.+.++++.     
T Consensus       753 Te~n~~t~LT~acaggh~e~vellv~rgan---------iehrdkkgf~plImaatagh~tvV~~llk~ha~vea-----  818 (2131)
T KOG4369|consen  753 TEPNIKTNLTSACAGGHREEVELLVVRGAN---------IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEA-----  818 (2131)
T ss_pred             cCccccccccccccCccHHHHHHHHHhccc---------ccccccccchhhhhhcccCchHHHHHHHhhhhhhhh-----
Confidence            445677888888888898999888888888         778888888999888888888888888888877653     


Q ss_pred             hhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCC
Q 045393          110 VLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLP  189 (580)
Q Consensus       110 ~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  189 (580)
                             ..|..+.|+|.+||..|+.++|++||..|++.. .++....|||.+|...|+.++++.|+..|.+.......+
T Consensus       819 -------Qsdrtkdt~lSlacsggr~~vvelLl~~ganke-hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSk  890 (2131)
T KOG4369|consen  819 -------QSDRTKDTMLSLACSGGRTRVVELLLNAGANKE-HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSK  890 (2131)
T ss_pred             -------hcccccCceEEEecCCCcchHHHHHHHhhcccc-ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccc
Confidence                   467888888888888888888888888888765 467778888888888888888888888887665666666


Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHc
Q 045393          190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAEN  269 (580)
Q Consensus       190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~  269 (580)
                      .|..||..|..+|+.+.++.|++.+.+.......+.+|+|-+|+..|+.+.+..||...+.. ..+-+.|.|||+-++..
T Consensus       891 lgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anv-ehRaktgltplme~Asg  969 (2131)
T KOG4369|consen  891 LGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANV-EHRAKTGLTPLMEMASG  969 (2131)
T ss_pred             cCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhh-hhhcccCCcccchhhcC
Confidence            78888888888888888888888887744445667788888888888888888888888776 56777888888888888


Q ss_pred             CcHHHHHHHHHhCCCccccc--cCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHH
Q 045393          270 GKLKVLKLLINKYPDAIEIR--NNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFT  347 (580)
Q Consensus       270 g~~~~v~~Ll~~~~~~~~~~--d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~  347 (580)
                      |++|+=++|+..|+| .+..  -..-.|+|-+++..||.+.++.|++.   .+-+..++++|+|+|-+|+..|+...+..
T Consensus       970 Gyvdvg~~li~~gad-~nasPvp~T~dtalti~a~kGh~kfv~~lln~---~atv~v~NkkG~T~Lwla~~Gg~lss~~i 1045 (2131)
T KOG4369|consen  970 GYVDVGNLLIAAGAD-TNASPVPNTWDTALTIPANKGHTKFVPKLLNG---DATVRVPNKKGCTVLWLASAGGALSSCPI 1045 (2131)
T ss_pred             Cccccchhhhhcccc-cccCCCCCcCCccceeecCCCchhhhHHhhCC---ccceecccCCCCcccchhccCCccccchH
Confidence            888888888888888 3321  22334888888888888888888876   34477888888888888888888888888


Q ss_pred             hhcCcccccccccccCCCCCHHHHHHH
Q 045393          348 LSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       348 Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      |+++ ++|++..|+  .-.|++..|.+
T Consensus      1046 l~~~-~ad~d~qdn--r~~S~~maafR 1069 (2131)
T KOG4369|consen 1046 LVSS-VADADQQDN--RTNSRTMAAFR 1069 (2131)
T ss_pred             Hhhc-ccChhhhhc--ccccccHHHHH
Confidence            8864 888888888  77777777665


No 40 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.95  E-value=2.6e-28  Score=250.26  Aligned_cols=323  Identities=17%  Similarity=0.198  Sum_probs=290.6

Q ss_pred             CHHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHH
Q 045393            2 DQELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALH   81 (580)
Q Consensus         2 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh   81 (580)
                      +..|-.||..|+.|.++.|+.+|.....+|+.|.+||..|+-.||..+|+.|+++.++        +-.+.|..++|+|.
T Consensus       758 ~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~--------veaQsdrtkdt~lS  829 (2131)
T KOG4369|consen  758 KTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHAD--------VEAQSDRTKDTMLS  829 (2131)
T ss_pred             cccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhh--------hhhhcccccCceEE
Confidence            4578899999999999999999988888999999999999999999999999999988        34557889999999


Q ss_pred             HHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc-ccCCCCHH
Q 045393           82 IAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYI-NKAYQTPL  160 (580)
Q Consensus        82 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~g~tpL  160 (580)
                      +||..|+.++|+.|+..|++..             .+|-...|||-+|...|..++++.|+..|..++... .+.|.+||
T Consensus       830 lacsggr~~vvelLl~~ganke-------------hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPL  896 (2131)
T KOG4369|consen  830 LACSGGRTRVVELLLNAGANKE-------------HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPL  896 (2131)
T ss_pred             EecCCCcchHHHHHHHhhcccc-------------ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchh
Confidence            9999999999999999998754             367788999999999999999999999998877543 45789999


Q ss_pred             HHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHH
Q 045393          161 SIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKM  240 (580)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~  240 (580)
                      ++|..+|+.+.++.|++.+ .+++..-..+.+|.|-.|+..|+.+.+..||..... +..+-..|.|||+-++..|.+++
T Consensus       897 mlatmngh~~at~~ll~~g-sdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~an-vehRaktgltplme~AsgGyvdv  974 (2131)
T KOG4369|consen  897 MLATMNGHQAATLSLLQPG-SDINAQIETNRNTALTLALFQGRPEVVFLLLAAQAN-VEHRAKTGLTPLMEMASGGYVDV  974 (2131)
T ss_pred             hhhhhccccHHHHHHhccc-chhccccccccccceeeccccCcchHHHHHHHHhhh-hhhhcccCCcccchhhcCCcccc
Confidence            9999999999999999999 455655555889999999999999999999988766 78888999999999999999999


Q ss_pred             HHHHHHhchhcccc-cCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchh
Q 045393          241 AQRLLEESKRLAYK-RDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEME  319 (580)
Q Consensus       241 v~~Ll~~~~~~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~  319 (580)
                      =+.|++.|+|.+.. ......|+|-+++..|+...++.|+...+. +..+|++|.|+|..|+..|+...+.+|+++   .
T Consensus       975 g~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~at-v~v~NkkG~T~Lwla~~Gg~lss~~il~~~---~ 1050 (2131)
T KOG4369|consen  975 GNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDAT-VRVPNKKGCTVLWLASAGGALSSCPILVSS---V 1050 (2131)
T ss_pred             chhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccc-eecccCCCCcccchhccCCccccchHHhhc---c
Confidence            99999999887432 233457899999999999999999988887 899999999999999999999999999999   5


Q ss_pred             hhcccccCCCCcHHHHHHhcCChhHHHHhhcC
Q 045393          320 NLINLVDRNGNTPLHLAAMGLHSDVVFTLSRH  351 (580)
Q Consensus       320 ~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~  351 (580)
                      ++++.+|+..+|+++-|.+.|+.++|++....
T Consensus      1051 ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1051 ADADQQDNRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             cChhhhhcccccccHHHHHhchhheeccccCc
Confidence            55899999999999999999999999887654


No 41 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95  E-value=7.8e-27  Score=214.54  Aligned_cols=173  Identities=14%  Similarity=0.183  Sum_probs=151.8

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcC--ChHHHHHHHHhchhcccccC-CCCCcHHHHH
Q 045393          190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASG--NVKMAQRLLEESKRLAYKRD-CNGETPLHLA  266 (580)
Q Consensus       190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~-~~g~tpL~~A  266 (580)
                      .+.+|||.|+..++.+.++.|++.    .+..|..|.||||+|+..+  +.+++++|+++|+++ +.++ ..|.||||+|
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpLh~a   94 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSALHHY   94 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHHHHH
Confidence            567899999999999999999864    4567889999999999854  899999999999998 4554 5899999998


Q ss_pred             HHc---CcHHHHHHHHHhCCCccccccCCCCCHHHHHHH--cCCHHHHHHHhcCcchhhhcccccCCCCcHHHH-HHhcC
Q 045393          267 AEN---GKLKVLKLLINKYPDAIEIRNNSDRSILHVAAK--HGNWNIVSFILRSPEMENLINLVDRNGNTPLHL-AAMGL  340 (580)
Q Consensus       267 ~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~--~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~-A~~~~  340 (580)
                      +..   ++.+++++|+++|++ ++.+|..|+||||+|+.  .++.+++++|++.+   .+++.+|.+|+||||. |+..+
T Consensus        95 ~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g---adin~~d~~g~t~Lh~~a~~~~  170 (209)
T PHA02859         95 LSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSG---VSFLNKDFDNNNILYSYILFHS  170 (209)
T ss_pred             HHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcC---CCcccccCCCCcHHHHHHHhcC
Confidence            764   579999999999999 89999999999999986  46899999999984   5599999999999995 56678


Q ss_pred             ChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          341 HSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       341 ~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      +.+++++|++. |+|++.+|.  .|+||+++|..
T Consensus       171 ~~~iv~~Ll~~-Gadi~~~d~--~g~tpl~la~~  201 (209)
T PHA02859        171 DKKIFDFLTSL-GIDINETNK--SGYNCYDLIKF  201 (209)
T ss_pred             CHHHHHHHHHc-CCCCCCCCC--CCCCHHHHHhh
Confidence            89999999965 999999999  99999999986


No 42 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=1.1e-25  Score=221.70  Aligned_cols=211  Identities=13%  Similarity=0.103  Sum_probs=139.3

Q ss_pred             HHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHH
Q 045393           49 VIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHN  128 (580)
Q Consensus        49 ~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~  128 (580)
                      +-++++.+|.+         ++.++.+|     +|+..+..|+++.|+.+|++++..      ..++ .++..++|+||+
T Consensus        64 ~~~~~~~~~~~---------i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~------~~~~-~~~~~~~~~L~~  122 (437)
T PHA02795         64 LYDYFRIHRDN---------IDQYIVDR-----LFAYITYKDIISALVSKNYMEDIF------SIII-KNCNSVQDLLLY  122 (437)
T ss_pred             HHHHHHHcCcc---------hhhhhhhh-----HHhhcchHHHHHHHHhcccccchh------hhhh-hccccccHHHHH
Confidence            45778888887         66666666     899999999999999999986621      1122 367789999999


Q ss_pred             HHH--cCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHH
Q 045393          129 AVT--NQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDI  206 (580)
Q Consensus       129 A~~--~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~  206 (580)
                      ++.  .|+.++|++|+++|++.+.   .++.||+|.|+..++.+++++|+++|....+..     .++++          
T Consensus       123 ~~~n~~n~~eiV~~LI~~GADIn~---~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~-----~~~l~----------  184 (437)
T PHA02795        123 YLSNAYVEIDIVDFMVDHGAVIYK---IECLNAYFRGICKKESSVVEFILNCGIPDENDV-----KLDLY----------  184 (437)
T ss_pred             HHHhcCCCHHHHHHHHHCCCCCCC---CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccc-----cchhh----------
Confidence            999  8999999999999999864   345899999999999999999999986332211     11110          


Q ss_pred             HHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCcc
Q 045393          207 MVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAI  286 (580)
Q Consensus       207 ~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~  286 (580)
                                     +..+.+++|.|+..++.+++++|+++|++. +.+|..|.||||+|+..|+.+++++|+++|++ +
T Consensus       185 ---------------~~~~~t~l~~a~~~~~~eIve~LIs~GADI-N~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAd-I  247 (437)
T PHA02795        185 ---------------KIIQYTRGFLVDEPTVLEIYKLCIPYIEDI-NQLDAGGRTLLYRAIYAGYIDLVSWLLENGAN-V  247 (437)
T ss_pred             ---------------hhhccchhHHHHhcCHHHHHHHHHhCcCCc-CcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-C
Confidence                           112334555555555555555555555544 44455555555555555555555555555555 4


Q ss_pred             ccccCCCCCHHHHHHHcCC--------HHHHHHHhcC
Q 045393          287 EIRNNSDRSILHVAAKHGN--------WNIVSFILRS  315 (580)
Q Consensus       287 ~~~d~~g~t~Lh~A~~~~~--------~~iv~~Ll~~  315 (580)
                      +.+|..|+||||+|+.+|+        .+++++|+++
T Consensus       248 N~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~  284 (437)
T PHA02795        248 NAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLRE  284 (437)
T ss_pred             CCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhC
Confidence            5555555555555555442        3455555554


No 43 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94  E-value=2.4e-25  Score=204.63  Aligned_cols=177  Identities=18%  Similarity=0.215  Sum_probs=126.9

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcC--cHHHHHHHHhcCCCCcCCCCCCCCccHHH
Q 045393          119 DIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDAR--LNDIACFIIDKSPESLNTTRLPDELTLIH  196 (580)
Q Consensus       119 d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~  196 (580)
                      ...+.||||+|++.|+.++|+.|++...    ..+..|.||||+|+.++  +.+++++|++++                 
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~n----~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~g-----------------   76 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKFVN----DCNDLYETPIFSCLEKDKVNVEILKFLIENG-----------------   76 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHhhh----ccCccCCCHHHHHHHcCCCCHHHHHHHHHCC-----------------
Confidence            4556677777777777777777665421    23455555555555432  445555555544                 


Q ss_pred             HHHHcCCHHHHHHHHhhCCccccccC-CCCChHHHHHHHc---CChHHHHHHHHhchhcccccCCCCCcHHHHHHH--cC
Q 045393          197 FVVMRQNYDIMVKILGTNKELIDRLD-WHQRNPLHYAAAS---GNVKMAQRLLEESKRLAYKRDCNGETPLHLAAE--NG  270 (580)
Q Consensus       197 ~A~~~~~~~~~~~Ll~~~~~~~~~~d-~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~--~g  270 (580)
                                        .+ ++.++ ..|.||||+|+..   ++.+++++|+++|+++ +.+|..|.||||.|+.  .+
T Consensus        77 ------------------ad-vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~  136 (209)
T PHA02859         77 ------------------AD-VNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNV  136 (209)
T ss_pred             ------------------CC-CCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccC
Confidence                              33 44444 3677777776653   4678888888888887 6778888999998875  46


Q ss_pred             cHHHHHHHHHhCCCccccccCCCCCHHHH-HHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcC
Q 045393          271 KLKVLKLLINKYPDAIEIRNNSDRSILHV-AAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGL  340 (580)
Q Consensus       271 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~-A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~  340 (580)
                      +.+++++|+++|++ ++.+|.+|.||||. |+..++.+++++|+++|   .+++.+|..|.||||+|..++
T Consensus       137 ~~~iv~~Li~~gad-in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~G---adi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        137 RINVIKLLIDSGVS-FLNKDFDNNNILYSYILFHSDKKIFDFLTSLG---IDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CHHHHHHHHHcCCC-cccccCCCCcHHHHHHHhcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHhhhh
Confidence            78999999999988 78889999999995 56678889999999884   458889999999999998654


No 44 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93  E-value=5.4e-24  Score=234.14  Aligned_cols=256  Identities=20%  Similarity=0.153  Sum_probs=182.4

Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhc--CcccccCCCcchhhhhhhccCCCCCcHHH-HHHHcCcHHHHHHHHHcCCCCCc
Q 045393           74 LMDETALHIAARIGDRAIVSEIMKY--LPAVNQVGPAPVLESLFRMTDIEGNTPLH-NAVTNQHKRVIRILVEKDSVPSS  150 (580)
Q Consensus        74 ~~g~tpLh~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~~~l~~~d~~g~tpL~-~A~~~~~~~~v~~Ll~~~~~~~~  150 (580)
                      ..++.+++.|++.|+.+.++.+++.  +.++|             ..|..|.|||| .|+.+++.++++.|+++|.    
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in-------------~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----   77 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNIN-------------CPDRLGRSALFVAAIENENLELTELLLNLSC----   77 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCC-------------CcCccchhHHHHHHHhcChHHHHHHHHhCCC----
Confidence            4567999999999999999999998  44443             57889999999 8899999999999999886    


Q ss_pred             ccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHH
Q 045393          151 YINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLH  230 (580)
Q Consensus       151 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~  230 (580)
                       .+..|.||||.|+.+ ..+.++.++........     .+..+              .+..   +.....+..|.||||
T Consensus        78 -~~~~G~T~Lh~A~~~-~~~~v~~ll~~l~~~~~-----~~~~~--------------~~~~---~~~~~~~~~G~TpLh  133 (743)
T TIGR00870        78 -RGAVGDTLLHAISLE-YVDAVEAILLHLLAAFR-----KSGPL--------------ELAN---DQYTSEFTPGITALH  133 (743)
T ss_pred             -CCCcChHHHHHHHhc-cHHHHHHHHHHHhhccc-----ccCch--------------hhhc---cccccccCCCCcHHH
Confidence             567889999998873 33333333332211000     00000              0000   001122346888888


Q ss_pred             HHHHcCChHHHHHHHHhchhccccc-------------CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHH
Q 045393          231 YAAASGNVKMAQRLLEESKRLAYKR-------------DCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSIL  297 (580)
Q Consensus       231 ~A~~~g~~~~v~~Ll~~~~~~~~~~-------------~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L  297 (580)
                      +|+.+|+.++++.|+++|+++....             ...|.||||.|+..|+.+++++|++++++ ++.+|..|+|||
T Consensus       134 lAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad-in~~d~~g~T~L  212 (743)
T TIGR00870       134 LAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD-ILTADSLGNTLL  212 (743)
T ss_pred             HHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc-hhhHhhhhhHHH
Confidence            8888888888888888887763211             13588999999999999999999999998 889999999999


Q ss_pred             HHHHHcC---------CHHHHHHHhcCcchhhhc----ccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCC
Q 045393          298 HVAAKHG---------NWNIVSFILRSPEMENLI----NLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSAR  364 (580)
Q Consensus       298 h~A~~~~---------~~~iv~~Ll~~~~~~~~~----n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~  364 (580)
                      |+|+..+         ...+.+++++.+......    +..|.+|.||||+|+..|+.++++.|++. +.+......  .
T Consensus       213 h~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~-~~~~kk~~a--~  289 (743)
T TIGR00870       213 HLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAI-KYKQKKFVA--W  289 (743)
T ss_pred             HHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHH-HHhcceeec--c
Confidence            9999986         234566666654433333    67899999999999999999999999863 222222223  5


Q ss_pred             CCCHHHHHHH
Q 045393          365 SNTALEIAEI  374 (580)
Q Consensus       365 g~t~l~~a~~  374 (580)
                      ...|.+.+..
T Consensus       290 ~~~~~~~~~~  299 (743)
T TIGR00870       290 PNGQQLLSLY  299 (743)
T ss_pred             CcchHhHhhh
Confidence            5556655544


No 45 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93  E-value=2.1e-26  Score=196.58  Aligned_cols=239  Identities=18%  Similarity=0.169  Sum_probs=203.1

Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHH
Q 045393          118 TDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHF  197 (580)
Q Consensus       118 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~  197 (580)
                      .+..|++-+-.+.+.++.+++..+....++.....+.+|++.++.++-.++.+.++..+.++... +..+. -+.+|+..
T Consensus        58 ~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rg-nevs~-~p~s~~sl  135 (296)
T KOG0502|consen   58 RNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARG-NEVSL-MPWSPLSL  135 (296)
T ss_pred             HHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccC-Ccccc-ccCChhhH
Confidence            55677777888888899888888888877777677888999999999999988888888887533 23333 67889999


Q ss_pred             HHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHH
Q 045393          198 VVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKL  277 (580)
Q Consensus       198 A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~  277 (580)
                      ++.+.+.+.+..+.+.   .+|..|+.|.|||.+|+..|+++.|++|++.|+++ ....+...++|.+|++.|+.++|++
T Consensus       136 sVhql~L~~~~~~~~n---~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp-~~lgk~resALsLAt~ggytdiV~l  211 (296)
T KOG0502|consen  136 SVHQLHLDVVDLLVNN---KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADP-DALGKYRESALSLATRGGYTDIVEL  211 (296)
T ss_pred             HHHHHHHHHHHHHhhc---cccCccccCchHhHHHHhcCchHHHHHHHHcCCCh-hhhhhhhhhhHhHHhcCChHHHHHH
Confidence            9988877776665554   38899999999999999999999999999999998 5567788999999999999999999


Q ss_pred             HHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccc
Q 045393          278 LINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIR  357 (580)
Q Consensus       278 Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~  357 (580)
                      |+.+++| +|..|-+|-|||-+|++.++.++++.|++.   +++++..|..|++++.+|+..|+- +++..+++ -++.+
T Consensus       212 LL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~s---GAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~-h~lkl  285 (296)
T KOG0502|consen  212 LLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNS---GADVTQEDDSGYWIMDLAVALGYR-IVQQVIEK-HALKL  285 (296)
T ss_pred             HHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhc---CCCcccccccCCcHHHHHHHhhhH-HHHHHHHH-HHHHH
Confidence            9999999 999999999999999999999999999999   555999999999999999999987 77766654 56777


Q ss_pred             cccccCCCCCHHH
Q 045393          358 AKNHSARSNTALE  370 (580)
Q Consensus       358 ~~n~~~~g~t~l~  370 (580)
                      .+|+  .-+||+|
T Consensus       286 ~Q~~--~~~~~~~  296 (296)
T KOG0502|consen  286 CQDS--EKRTPLH  296 (296)
T ss_pred             hhcc--cCCCCCC
Confidence            7777  7777753


No 46 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.93  E-value=1e-24  Score=215.02  Aligned_cols=237  Identities=15%  Similarity=0.159  Sum_probs=172.4

Q ss_pred             HHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHH--hCCHHHHHHH
Q 045393           18 KQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAAR--IGDRAIVSEI   95 (580)
Q Consensus        18 ~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~--~g~~~~v~~L   95 (580)
                      +++++.|...+..+.+|     +|+..+..|+++.|+.+|.+++...   .+-.++..++|+||+++.  .|+.++|++|
T Consensus        66 ~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~---~~~~~~~~~~~~L~~~~~n~~n~~eiV~~L  137 (437)
T PHA02795         66 DYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFS---IIIKNCNSVQDLLLYYLSNAYVEIDIVDFM  137 (437)
T ss_pred             HHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhh---hhhhccccccHHHHHHHHhcCCCHHHHHHH
Confidence            55666666555555555     9999999999999999999822110   011577889999999999  8999999999


Q ss_pred             HhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHH
Q 045393           96 MKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFI  175 (580)
Q Consensus        96 l~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L  175 (580)
                      +++|++++.               .++.||||.|+..++.+++++|+++|++....    +.+|++-+            
T Consensus       138 I~~GADIn~---------------~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~----~~~~l~~~------------  186 (437)
T PHA02795        138 VDHGAVIYK---------------IECLNAYFRGICKKESSVVEFILNCGIPDEND----VKLDLYKI------------  186 (437)
T ss_pred             HHCCCCCCC---------------CCCCCHHHHHHHcCcHHHHHHHHhcCCccccc----ccchhhhh------------
Confidence            999999762               24589999999999999999999999854321    12222111            


Q ss_pred             HhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhccccc
Q 045393          176 IDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKR  255 (580)
Q Consensus       176 l~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  255 (580)
                                    .+.+++|.|...++.++++.|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|+++ +.+
T Consensus       187 --------------~~~t~l~~a~~~~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI-N~~  250 (437)
T PHA02795        187 --------------IQYTRGFLVDEPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV-NAV  250 (437)
T ss_pred             --------------hccchhHHHHhcCHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCc
Confidence                          345667777777777777777776654 7777788888888888888888888888888777 667


Q ss_pred             CCCCCcHHHHHHHcCc--------HHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcC
Q 045393          256 DCNGETPLHLAAENGK--------LKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRS  315 (580)
Q Consensus       256 ~~~g~tpL~~A~~~g~--------~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  315 (580)
                      +..|.||||+|+..|+        .+++++|++++++ ++..+.   +++..  ...+.++++.+++.
T Consensus       251 d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gad-I~~~~~---~~~~~--~~~n~~~ik~lI~y  312 (437)
T PHA02795        251 MSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLS-IDCIKL---AILNN--TIENHDVIKLCIKY  312 (437)
T ss_pred             CCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCC-CCchhH---Hhhhc--ccchHHHHHHHHHH
Confidence            7788888888887773        5788888888777 443322   22221  11256777777765


No 47 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.93  E-value=2.1e-25  Score=223.00  Aligned_cols=260  Identities=25%  Similarity=0.312  Sum_probs=213.9

Q ss_pred             CCHHHHHHHHcCCHHHHHHHhhhc-------------CcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhh
Q 045393            1 MDQELLEVLRHGDEYKIKQLALRQ-------------DIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYS   67 (580)
Q Consensus         1 m~~~L~~A~~~g~~~~~~~ll~~~-------------~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~   67 (580)
                      |++.+..|++.||.+.+..+++..             +..+..|.+|.|+||.|+.+|+.++++.|++..+-        
T Consensus         3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~--------   74 (854)
T KOG0507|consen    3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL--------   74 (854)
T ss_pred             hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh--------
Confidence            567899999999999999999862             44566788999999999999999999999998876        


Q ss_pred             hcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Q 045393           68 LLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSV  147 (580)
Q Consensus        68 ~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~  147 (580)
                       ++..|..|.+|||+|+.+|+.++++.++.++...|             ..+.+|.||||.|++.||.+++.+|+.+|++
T Consensus        75 -ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~n-------------a~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad  140 (854)
T KOG0507|consen   75 -LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILN-------------AVNIENETPLHLAAQHGHLEVVFYLLKKNAD  140 (854)
T ss_pred             -hhhhhccCcceEEehhhcCcchHHHHHHhcccCCC-------------cccccCcCccchhhhhcchHHHHHHHhcCCC
Confidence             77788999999999999999999999999884443             6788999999999999999999999999999


Q ss_pred             CCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCCh
Q 045393          148 PSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRN  227 (580)
Q Consensus       148 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t  227 (580)
                      +. .+|..+.|+|.+|++-|..++++.|++.. -....                        +...+   -..++-.+.+
T Consensus       141 p~-i~nns~~t~ldlA~qfgr~~Vvq~ll~~~-~~~~~------------------------~~~~~---~~~~~~~~~~  191 (854)
T KOG0507|consen  141 PF-IRNNSKETVLDLASRFGRAEVVQMLLQKK-FPVQS------------------------SLRVG---DIKRPFPAIY  191 (854)
T ss_pred             cc-ccCcccccHHHHHHHhhhhHHHHHHhhhc-cchhh------------------------cccCC---CCCCCCCCcC
Confidence            87 68999999999999999999999999872 11000                        11111   2334566788


Q ss_pred             HHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHc---C
Q 045393          228 PLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKH---G  304 (580)
Q Consensus       228 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~---~  304 (580)
                      |||.|+++|+.++++.|++.|.+. +... ..-|+||.|+..|..++|++|++.|.. ...+|.+|+|+|.+-...   .
T Consensus       192 plHlaakngh~~~~~~ll~ag~di-n~~t-~~gtalheaalcgk~evvr~ll~~gin-~h~~n~~~qtaldil~d~~~~~  268 (854)
T KOG0507|consen  192 PLHLAAKNGHVECMQALLEAGFDI-NYTT-EDGTALHEAALCGKAEVVRFLLEIGIN-THIKNQHGQTALDIIIDLQENR  268 (854)
T ss_pred             CcchhhhcchHHHHHHHHhcCCCc-cccc-ccchhhhhHhhcCcchhhhHHHhhccc-cccccccchHHHHHHHhcchhh
Confidence            999999999999999999999887 3333 344889999999999999999999888 788899999988876643   3


Q ss_pred             CHHHHHHHhc
Q 045393          305 NWNIVSFILR  314 (580)
Q Consensus       305 ~~~iv~~Ll~  314 (580)
                      ..+++-++..
T Consensus       269 ~~ei~ga~~~  278 (854)
T KOG0507|consen  269 RYEIAGAVKN  278 (854)
T ss_pred             hhhhhhhhhc
Confidence            3445444443


No 48 
>PF13962 PGG:  Domain of unknown function
Probab=99.91  E-value=2.2e-24  Score=176.07  Aligned_cols=111  Identities=41%  Similarity=0.603  Sum_probs=96.7

Q ss_pred             chhhhhhhcceeeehhhHHHHhhhhcccCCccccCCCCCCCcccccccc-hhHHHHHHhHHHHHHHHHHHHHHHHhhhcc
Q 045393          416 GEKGKEMAQTLSVMATLIATFTFTAAFTIPGGVKSDGPDEGTATLLHRA-SFQAFVITDTIAMTSAMAAAAIIFWSFWRS  494 (580)
Q Consensus       416 ~e~~~~~~~~~~vvA~Liatv~f~a~~~~pgg~~~~~~~~g~~~~~~~~-~~~~f~~~~~~a~~~s~~~~~~~~~~~~~~  494 (580)
                      +||.+++++++++||+||||+||+|+++||||+|+++++.|+|++.+++ .|..|+++|++||++|++++++++ +.+ .
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~-~~~-~   78 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLI-SGL-D   78 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHH-HHh-h
Confidence            3689999999999999999999999999999999987689999998877 899999999999999999999988 433 2


Q ss_pred             cchhhhh-hHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045393          495 KTESLMD-TLPLAIGFTWIALVSMTLAFVTGLYAV  528 (580)
Q Consensus       495 ~~~~~~~-~~~~~~~~~~~~~~~~~~af~~~~~~~  528 (580)
                      +..+... .+..+..++|+++.+|++||++|+++|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v  113 (113)
T PF13962_consen   79 DFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV  113 (113)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            2233333 377889999999999999999999864


No 49 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91  E-value=3.2e-24  Score=183.24  Aligned_cols=265  Identities=20%  Similarity=0.252  Sum_probs=225.5

Q ss_pred             CchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhh
Q 045393           35 NAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESL  114 (580)
Q Consensus        35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~  114 (580)
                      -..+..++..|-.+--..|......           -++..|+.-+-.+.+.|+.+++..+....++.+.          
T Consensus        32 ~a~~~~~~~m~~t~p~~~l~~~~s~-----------~~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~----------   90 (296)
T KOG0502|consen   32 IAELFEQVEMGTTEPRCALTAEISA-----------LRNALGESLLTVAVRSGNSDVAVQSAQLDPDAID----------   90 (296)
T ss_pred             HHHHHHHhhccccchhHHHHHHHHH-----------HHHhcCCcccchhhhcCCcHHHHHhhccCCCCCC----------
Confidence            3456666666666655555543322           2566788888889999999999988887665332          


Q ss_pred             hhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccH
Q 045393          115 FRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTL  194 (580)
Q Consensus       115 l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~  194 (580)
                        .++.+|.++++.++-.++...+..++.+++..+ ..+--+.+|+.+++...+.+.+..+.++   ..+..+. .|.||
T Consensus        91 --~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgn-evs~~p~s~~slsVhql~L~~~~~~~~n---~VN~~De-~GfTp  163 (296)
T KOG0502|consen   91 --ETDPEGWSALLVAAPCGSVDKVSTTLTNGARGN-EVSLMPWSPLSLSVHQLHLDVVDLLVNN---KVNACDE-FGFTP  163 (296)
T ss_pred             --CCCchhhhhhhhcCCCCCcceeeeeecccccCC-ccccccCChhhHHHHHHHHHHHHHHhhc---cccCccc-cCchH
Confidence              367779999999999999999999999998776 4677889999999999888887776654   3456666 99999


Q ss_pred             HHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHH
Q 045393          195 IHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKV  274 (580)
Q Consensus       195 L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~  274 (580)
                      |..|+..|+.+.+++|++.+.+ ++...+...++|.+|++.|..++|+.|++++.++ +..|.+|-|||.+|++.++.++
T Consensus       164 LiWAaa~G~i~vV~fLL~~GAd-p~~lgk~resALsLAt~ggytdiV~lLL~r~vdV-NvyDwNGgTpLlyAvrgnhvkc  241 (296)
T KOG0502|consen  164 LIWAAAKGHIPVVQFLLNSGAD-PDALGKYRESALSLATRGGYTDIVELLLTREVDV-NVYDWNGGTPLLYAVRGNHVKC  241 (296)
T ss_pred             hHHHHhcCchHHHHHHHHcCCC-hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc-ceeccCCCceeeeeecCChHHH
Confidence            9999999999999999999987 8888888999999999999999999999999998 7889999999999999999999


Q ss_pred             HHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHH
Q 045393          275 LKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLH  334 (580)
Q Consensus       275 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh  334 (580)
                      ++.|++.|++ ++..+..|++++..|+..|+. +|+..+++   ..+.+.+|+.-.||+|
T Consensus       242 ve~Ll~sGAd-~t~e~dsGy~~mdlAValGyr-~Vqqvie~---h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  242 VESLLNSGAD-VTQEDDSGYWIMDLAVALGYR-IVQQVIEK---HALKLCQDSEKRTPLH  296 (296)
T ss_pred             HHHHHhcCCC-cccccccCCcHHHHHHHhhhH-HHHHHHHH---HHHHHhhcccCCCCCC
Confidence            9999999999 899999999999999999998 88888887   5568889988888876


No 50 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.90  E-value=3.1e-23  Score=228.16  Aligned_cols=255  Identities=15%  Similarity=0.110  Sum_probs=166.6

Q ss_pred             CCCCchhhHHHhcCCHHHHHHHHhh--CchhHHhhhhhhcccccCCCCcHHH-HHHHhCCHHHHHHHHhcCcccccCCCc
Q 045393           32 PGGNAVLHMAVRFRNQQVIREILRQ--QDFIALRLHYSLLRQKNLMDETALH-IAARIGDRAIVSEIMKYLPAVNQVGPA  108 (580)
Q Consensus        32 ~~g~t~Lh~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~~~~~~g~tpLh-~Aa~~g~~~~v~~Ll~~~~~~~~~~~~  108 (580)
                      ..+...++.|+..|+.+.++.++++  +.+         ++..|..|+|||| .|+.+++.++++.|+++++        
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~---------in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~--------   77 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLN---------INCPDRLGRSALFVAAIENENLELTELLLNLSC--------   77 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccC---------CCCcCccchhHHHHHHHhcChHHHHHHHHhCCC--------
Confidence            3567899999999999999999998  555         7788899999999 8888999999999998764        


Q ss_pred             chhhhhhhccCCCCCcHHHHHHHcC---cHHHHHHHHHcCCCC---------CcccccCCCCHHHHHHHcCcHHHHHHHH
Q 045393          109 PVLESLFRMTDIEGNTPLHNAVTNQ---HKRVIRILVEKDSVP---------SSYINKAYQTPLSIAIDARLNDIACFII  176 (580)
Q Consensus       109 ~~~~~~l~~~d~~g~tpL~~A~~~~---~~~~v~~Ll~~~~~~---------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll  176 (580)
                               .+..|.||||.|+.++   ..++++.+.+.+.+.         ....+..|.||||+|+.+|+.+++++|+
T Consensus        78 ---------~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL  148 (743)
T TIGR00870        78 ---------RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLL  148 (743)
T ss_pred             ---------CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHH
Confidence                     3567999999998732   233444444444321         0112345788888888888888888888


Q ss_pred             hcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccC
Q 045393          177 DKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRD  256 (580)
Q Consensus       177 ~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  256 (580)
                      +++++. +...  .+....                . . . .......|.||||.|+..|+.+++++|+++|+++ +.+|
T Consensus       149 ~~GAdv-~~~~--~~~~~~----------------~-~-~-~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi-n~~d  205 (743)
T TIGR00870       149 ERGASV-PARA--CGDFFV----------------K-S-Q-GVDSFYHGESPLNAAACLGSPSIVALLSEDPADI-LTAD  205 (743)
T ss_pred             hCCCCC-CcCc--CCchhh----------------c-C-C-CCCcccccccHHHHHHHhCCHHHHHHHhcCCcch-hhHh
Confidence            877532 2211  010000                0 0 0 0011235777777777777777777777777766 5667


Q ss_pred             CCCCcHHHHHHHcC---------cHHHHHHHHHhCCCc--c----ccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhh
Q 045393          257 CNGETPLHLAAENG---------KLKVLKLLINKYPDA--I----EIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENL  321 (580)
Q Consensus       257 ~~g~tpL~~A~~~g---------~~~~v~~Ll~~~~~~--~----~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~  321 (580)
                      ..|+||||+|+..+         ...+.+++++.+...  .    +..|.+|.||||+|+..|+.+++++|++.+..   
T Consensus       206 ~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~---  282 (743)
T TIGR00870       206 SLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK---  282 (743)
T ss_pred             hhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHh---
Confidence            77777777777765         223444555443331  1    45677778888888888888888877764211   


Q ss_pred             cccccCCCCcHHHHHHh
Q 045393          322 INLVDRNGNTPLHLAAM  338 (580)
Q Consensus       322 ~n~~d~~G~T~Lh~A~~  338 (580)
                      .......++.|.+.+..
T Consensus       283 ~kk~~a~~~~~~~~~~~  299 (743)
T TIGR00870       283 QKKFVAWPNGQQLLSLY  299 (743)
T ss_pred             cceeeccCcchHhHhhh
Confidence            22233445555555543


No 51 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90  E-value=1.4e-22  Score=223.93  Aligned_cols=174  Identities=23%  Similarity=0.269  Sum_probs=160.0

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHc
Q 045393          190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAEN  269 (580)
Q Consensus       190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~  269 (580)
                      ...++|+.|+..|+.++++.|++.+.+ ++..|.+|+||||+|+..|+.++++.|+++|+++ +.+|.+|.||||.|+..
T Consensus       524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~A~~~  601 (823)
T PLN03192        524 NMASNLLTVASTGNAALLEELLKAKLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWNAISA  601 (823)
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHHh
Confidence            567899999999999999999998876 8999999999999999999999999999999987 78899999999999999


Q ss_pred             CcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhh
Q 045393          270 GKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLS  349 (580)
Q Consensus       270 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll  349 (580)
                      |+.+++++|++.++. .+  ...|.++||.|+.+|+.+++++|+++|   +++|.+|.+|+||||+|+..|+.+++++|+
T Consensus       602 g~~~iv~~L~~~~~~-~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~G---adin~~d~~G~TpLh~A~~~g~~~iv~~Ll  675 (823)
T PLN03192        602 KHHKIFRILYHFASI-SD--PHAAGDLLCTAAKRNDLTAMKELLKQG---LNVDSEDHQGATALQVAMAEDHVDMVRLLI  675 (823)
T ss_pred             CCHHHHHHHHhcCcc-cC--cccCchHHHHHHHhCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHCCcHHHHHHHH
Confidence            999999999987665 22  356789999999999999999999994   559999999999999999999999999999


Q ss_pred             cCcccccccccccCCC-CCHHHHHHH
Q 045393          350 RHKSVNIRAKNHSARS-NTALEIAEI  374 (580)
Q Consensus       350 ~~~~~d~~~~n~~~~g-~t~l~~a~~  374 (580)
                      + .|+|++.+|.  .| .||++++..
T Consensus       676 ~-~GAdv~~~~~--~g~~t~~~l~~~  698 (823)
T PLN03192        676 M-NGADVDKANT--DDDFSPTELREL  698 (823)
T ss_pred             H-cCCCCCCCCC--CCCCCHHHHHHH
Confidence            6 4999999998  87 999998876


No 52 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.89  E-value=5.5e-23  Score=205.78  Aligned_cols=250  Identities=22%  Similarity=0.303  Sum_probs=164.0

Q ss_pred             cHHHHHHHhCCHHHHHHHHhcCcccccCCCc--chhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccC
Q 045393           78 TALHIAARIGDRAIVSEIMKYLPAVNQVGPA--PVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKA  155 (580)
Q Consensus        78 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~--~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  155 (580)
                      +-|.-|++.|+++.+..|++.-..  ..+..  .....-.+.+|.+|.|+||.|+.+|+.+++++|+++.+-.. ..+..
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~--r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ld-l~d~k   81 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKG--RSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLD-LCDTK   81 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCC--CCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhh-hhhcc
Confidence            456779999999999999986432  11110  01122355678899999999999999999999999887554 45677


Q ss_pred             CCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHc
Q 045393          156 YQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAAS  235 (580)
Q Consensus       156 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~  235 (580)
                      |.+|||+|+..|+.++++.++..+ +..+.... .|.+|||.|+.+|+.+.+.+|+.++.+ .-.++.++.|+|..|++.
T Consensus        82 g~~plhlaaw~g~~e~vkmll~q~-d~~na~~~-e~~tplhlaaqhgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qf  158 (854)
T KOG0507|consen   82 GILPLHLAAWNGNLEIVKMLLLQT-DILNAVNI-ENETPLHLAAQHGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRF  158 (854)
T ss_pred             CcceEEehhhcCcchHHHHHHhcc-cCCCcccc-cCcCccchhhhhcchHHHHHHHhcCCC-ccccCcccccHHHHHHHh
Confidence            788888888888888888877776 44444444 667777777777777777777766655 556666677777777777


Q ss_pred             CChHHHHHHHHhchhcc-------cccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHH
Q 045393          236 GNVKMAQRLLEESKRLA-------YKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNI  308 (580)
Q Consensus       236 g~~~~v~~Ll~~~~~~~-------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~i  308 (580)
                      |..++++.|+...-...       ..++-.+.+|+|.|+++|+.++++.|++.|.+ ++.....| |+||-|+..|..++
T Consensus       159 gr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~d-in~~t~~g-talheaalcgk~ev  236 (854)
T KOG0507|consen  159 GRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFD-INYTTEDG-TALHEAALCGKAEV  236 (854)
T ss_pred             hhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCC-cccccccc-hhhhhHhhcCcchh
Confidence            77777776666521110       11233445566666666666666666666666 55544444 66666666666666


Q ss_pred             HHHHhcCcchhhhcccccCCCCcHHHHHHh
Q 045393          309 VSFILRSPEMENLINLVDRNGNTPLHLAAM  338 (580)
Q Consensus       309 v~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~  338 (580)
                      |++|++.|..   ...+|.+|.|+|.+-..
T Consensus       237 vr~ll~~gin---~h~~n~~~qtaldil~d  263 (854)
T KOG0507|consen  237 VRFLLEIGIN---THIKNQHGQTALDIIID  263 (854)
T ss_pred             hhHHHhhccc---cccccccchHHHHHHHh
Confidence            6666665333   55566666666655443


No 53 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.87  E-value=3.2e-21  Score=213.20  Aligned_cols=193  Identities=12%  Similarity=0.108  Sum_probs=165.2

Q ss_pred             HHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhC
Q 045393          135 KRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTN  214 (580)
Q Consensus       135 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~  214 (580)
                      .++-..+.+.+..   ..+..+.++|+.|+..|+.++++.|++.+. +++..+. .|.||||.|+..|+.++++.|++.+
T Consensus       507 l~v~~ll~~~~~~---~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~-d~n~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~g  581 (823)
T PLN03192        507 LNVGDLLGDNGGE---HDDPNMASNLLTVASTGNAALLEELLKAKL-DPDIGDS-KGRTPLHIAASKGYEDCVLVLLKHA  581 (823)
T ss_pred             ccHHHHHhhcccc---cCCccchhHHHHHHHcCCHHHHHHHHHCCC-CCCCCCC-CCCCHHHHHHHcChHHHHHHHHhcC
Confidence            3444445444432   234456799999999999999999999984 5566666 8999999999999999999999987


Q ss_pred             CccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCC
Q 045393          215 KELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDR  294 (580)
Q Consensus       215 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~  294 (580)
                      .+ ++.+|.+|+||||.|+..|+.++++.|++.++..   ....+.++||.|+..|+.+++++|+++|++ ++.+|.+|+
T Consensus       582 ad-in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gad-in~~d~~G~  656 (823)
T PLN03192        582 CN-VHIRDANGNTALWNAISAKHHKIFRILYHFASIS---DPHAAGDLLCTAAKRNDLTAMKELLKQGLN-VDSEDHQGA  656 (823)
T ss_pred             CC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCccc---CcccCchHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCC
Confidence            65 8999999999999999999999999999877544   234678999999999999999999999999 899999999


Q ss_pred             CHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCC-CcHHHHHHhcC
Q 045393          295 SILHVAAKHGNWNIVSFILRSPEMENLINLVDRNG-NTPLHLAAMGL  340 (580)
Q Consensus       295 t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G-~T~Lh~A~~~~  340 (580)
                      ||||+|+..|+.+++++|+++|   ++++..|..| .||++++....
T Consensus       657 TpLh~A~~~g~~~iv~~Ll~~G---Adv~~~~~~g~~t~~~l~~~~~  700 (823)
T PLN03192        657 TALQVAMAEDHVDMVRLLIMNG---ADVDKANTDDDFSPTELRELLQ  700 (823)
T ss_pred             CHHHHHHHCCcHHHHHHHHHcC---CCCCCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999995   5589999988 99999886543


No 54 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.87  E-value=7.7e-22  Score=191.16  Aligned_cols=229  Identities=24%  Similarity=0.258  Sum_probs=165.0

Q ss_pred             chhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhh
Q 045393           36 AVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLF  115 (580)
Q Consensus        36 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l  115 (580)
                      -.+.-|+..|+.+-|+.|+..|+.         ++..|.+|.|+||-+|...+.+||++|+++|++++            
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga~---------~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn------------  100 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGAS---------PNLCNVDGLTALHQACIDDNLEMVKFLVENGANVN------------  100 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCCC---------ccccCCccchhHHHHHhcccHHHHHHHHHhcCCcc------------
Confidence            356678899999999999999988         68899999999999999999999999999999987            


Q ss_pred             hccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHH
Q 045393          116 RMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLI  195 (580)
Q Consensus       116 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L  195 (580)
                       ..|.+|+||||.|+..|+..++++|+++|++.. ..|.+|..|...+......++...-......+            +
T Consensus       101 -~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~-avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~------------i  166 (527)
T KOG0505|consen  101 -AQDNEGWTPLHAAASCGYLNIVEYLIQHGANLL-AVNSDGNMPYDLAEDEATLDVLETEMARQGID------------I  166 (527)
T ss_pred             -ccccccCCcchhhcccccHHHHHHHHHhhhhhh-hccCCCCCccccccCcchhHHHHHHHHHhccc------------H
Confidence             589999999999999999999999999999887 46888888877765554444444443332111            1


Q ss_pred             HHHHHcCC---HHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcH
Q 045393          196 HFVVMRQN---YDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKL  272 (580)
Q Consensus       196 ~~A~~~~~---~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~  272 (580)
                      ..+-....   ..-+...+..+ ...+.++..|.|.||.|+.+|..+..++|++.|.++ +.+|.+|+||||.|+..|..
T Consensus       167 ea~R~~~e~~ml~D~~q~l~~G-~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~-~~~D~dgWtPlHAAA~Wg~~  244 (527)
T KOG0505|consen  167 EAARKAEEQTMLDDARQWLNAG-AELDARHARGATALHVAAANGYTEVAALLLQAGYSV-NIKDYDGWTPLHAAAHWGQE  244 (527)
T ss_pred             HHHhhhhHHHHHHHHHHHHhcc-ccccccccccchHHHHHHhhhHHHHHHHHHHhccCc-ccccccCCCcccHHHHhhhH
Confidence            11111111   11122233333 225555555677777777777777777777777666 56666777777777777777


Q ss_pred             HHHHHHHHhCCCccccccCCCCCHHHHHHH
Q 045393          273 KVLKLLINKYPDAIEIRNNSDRSILHVAAK  302 (580)
Q Consensus       273 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~  302 (580)
                      +++++|++++++ .+.....|+||+.+|..
T Consensus       245 ~~~elL~~~ga~-~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  245 DACELLVEHGAD-MDAKTKMGETPLDVADE  273 (527)
T ss_pred             hHHHHHHHhhcc-cchhhhcCCCCccchhh
Confidence            777777777776 66666677777666654


No 55 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85  E-value=2e-21  Score=178.67  Aligned_cols=150  Identities=26%  Similarity=0.315  Sum_probs=130.6

Q ss_pred             ccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHH-----cCcHHHHHHHHHhCCCccccc-cC
Q 045393          218 IDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAE-----NGKLKVLKLLINKYPDAIEIR-NN  291 (580)
Q Consensus       218 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~-----~g~~~~v~~Ll~~~~~~~~~~-d~  291 (580)
                      +|..|.+|+|+|||++.+++.++|+.||+.|....+..++-|+||+++++.     ..+.++|..|.+-|.  +|.+ ..
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgn--VNaKAsQ  338 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGD--VNAKASQ  338 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccC--cchhhhh
Confidence            577799999999999999999999999999976668888999999999885     346778888886553  3433 56


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHH
Q 045393          292 SDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEI  371 (580)
Q Consensus       292 ~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~  371 (580)
                      .|+|+|++|+.+|+.++|+.||..   ++++|.+|.+|.|+|+.|+..||.+++++||...++|....|.  +|-|+|.+
T Consensus       339 ~gQTALMLAVSHGr~d~vk~LLac---gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~--DgSTAl~I  413 (452)
T KOG0514|consen  339 HGQTALMLAVSHGRVDMVKALLAC---GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDV--DGSTALSI  413 (452)
T ss_pred             hcchhhhhhhhcCcHHHHHHHHHc---cCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecC--CCchhhhh
Confidence            799999999999999999999987   5669999999999999999999999999999999999999999  99999999


Q ss_pred             HHH
Q 045393          372 AEI  374 (580)
Q Consensus       372 a~~  374 (580)
                      |.+
T Consensus       414 Ale  416 (452)
T KOG0514|consen  414 ALE  416 (452)
T ss_pred             HHh
Confidence            987


No 56 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.85  E-value=1.2e-20  Score=155.34  Aligned_cols=141  Identities=32%  Similarity=0.369  Sum_probs=131.1

Q ss_pred             HHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHH
Q 045393          228 PLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWN  307 (580)
Q Consensus       228 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~  307 (580)
                      .+.+|+..+....|+.||+..++..+.+|.+|.||||.|+++|+.+|++.|+..|++ .+.+...|+||||-||+.++.+
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCC-cccccccCccchhhhhcccchh
Confidence            467889999999999999999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             HHHHHhcCcchhhhcccccCCCCcHHHHHHhcCCh-hHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          308 IVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHS-DVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       308 iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~-~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      ++..|+.+   ++++|++.+...||||+|+...+. ..+++|+..+++++-.+|.  .+.||+++|.+
T Consensus       145 va~~LLqh---gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn--~eeta~~iARR  207 (228)
T KOG0512|consen  145 VAGRLLQH---GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNN--LEETAFDIARR  207 (228)
T ss_pred             HHHHHHhc---cCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcC--ccchHHHHHHH
Confidence            99999999   555999999999999999988774 5577888889999999999  99999999987


No 57 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84  E-value=4.5e-21  Score=176.31  Aligned_cols=162  Identities=26%  Similarity=0.399  Sum_probs=145.1

Q ss_pred             CCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHc-----CChHHHHHHHHhchhcccccCCC
Q 045393          184 NTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAAS-----GNVKMAQRLLEESKRLAYKRDCN  258 (580)
Q Consensus       184 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~-----g~~~~v~~Ll~~~~~~~~~~~~~  258 (580)
                      +..+. +|+|+||+++.+.|+++|+.||+.+..+++..++-|.||+++++..     .+.++|..|.+.|.-. -.....
T Consensus       262 NlaDs-NGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVN-aKAsQ~  339 (452)
T KOG0514|consen  262 NLADS-NGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVN-AKASQH  339 (452)
T ss_pred             hhhcC-CCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcc-hhhhhh
Confidence            34455 9999999999999999999999999999999999999999998754     4678999999887432 445668


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHh
Q 045393          259 GETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAM  338 (580)
Q Consensus       259 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~  338 (580)
                      |+|+|++|+.+|+.++|+.|+..|+| +|++|.+|.|+|++|+++||.|++++||..+.  .++...|.+|.|+|.+|..
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAd-VNiQDdDGSTALMCA~EHGhkEivklLLA~p~--cd~sLtD~DgSTAl~IAle  416 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGAD-VNIQDDDGSTALMCAAEHGHKEIVKLLLAVPS--CDISLTDVDGSTALSIALE  416 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCC-CccccCCccHHHhhhhhhChHHHHHHHhccCc--ccceeecCCCchhhhhHHh
Confidence            99999999999999999999999999 99999999999999999999999999998864  4588899999999999999


Q ss_pred             cCChhHHHHhhc
Q 045393          339 GLHSDVVFTLSR  350 (580)
Q Consensus       339 ~~~~~~~~~Ll~  350 (580)
                      .|+.++.-+|..
T Consensus       417 agh~eIa~mlYa  428 (452)
T KOG0514|consen  417 AGHREIAVMLYA  428 (452)
T ss_pred             cCchHHHHHHHH
Confidence            999999887754


No 58 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.84  E-value=1.6e-20  Score=165.99  Aligned_cols=141  Identities=18%  Similarity=0.255  Sum_probs=121.8

Q ss_pred             ccccCCCCChHHHHHHHcCCh----HHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHH---HHHHHHhCCCcccccc
Q 045393          218 IDRLDWHQRNPLHYAAASGNV----KMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKV---LKLLINKYPDAIEIRN  290 (580)
Q Consensus       218 ~~~~d~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~---v~~Ll~~~~~~~~~~d  290 (580)
                      ++..+.++.+++|.|++.|+.    +++++|.+.+... +.+|..|.||||+|+..|+.+.   +++|+++|++ ++.+|
T Consensus        13 ~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad-in~~d   90 (166)
T PHA02743         13 AVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLL-HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD-INARE   90 (166)
T ss_pred             HhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhh-hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC-CCCCC
Confidence            555677888999999999998    5666777778776 6778899999999999988654   8999999998 88888


Q ss_pred             -CCCCCHHHHHHHcCCHHHHHHHhc-CcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCC
Q 045393          291 -NSDRSILHVAAKHGNWNIVSFILR-SPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSN  366 (580)
Q Consensus       291 -~~g~t~Lh~A~~~~~~~iv~~Ll~-~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~  366 (580)
                       ..|+||||+|+.+++.+++++|++ .   +.+++.+|..|.||||+|+..++.+++++|+.+ |++++.++.  .|.
T Consensus        91 ~~~g~TpLh~A~~~g~~~iv~~Ll~~~---gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~~~~~--~~~  162 (166)
T PHA02743         91 LGTGNTLLHIAASTKNYELAEWLCRQL---GVNLGAINYQHETAYHIAYKMRDRRMMEILRAN-GAVCDDPLS--IGL  162 (166)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhcc---CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCccc--CCc
Confidence             589999999999999999999995 5   445899999999999999999999999999965 899999988  654


No 59 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.84  E-value=2.3e-19  Score=182.62  Aligned_cols=214  Identities=20%  Similarity=0.234  Sum_probs=164.2

Q ss_pred             CHHHHHHHcCcHHHHHHHHhcCC--------CCcCCCCCCCCccHHHHHHHc---CCHHHHHHHHhhCCcccccc----C
Q 045393          158 TPLSIAIDARLNDIACFIIDKSP--------ESLNTTRLPDELTLIHFVVMR---QNYDIMVKILGTNKELIDRL----D  222 (580)
Q Consensus       158 tpL~~A~~~~~~~~v~~Ll~~~~--------~~~~~~~~~~~~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~~~----d  222 (580)
                      .++..+...+..+....++....        .+.+.... .|.|.||.|..+   ++.++++.|++..+..++..    .
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa-~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee  181 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGA-TGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE  181 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccc-hhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence            45555555555555555544431        12222233 788889888874   34578888888887776654    3


Q ss_pred             CCCChHHHHHHHcCChHHHHHHHHhchhcccc--------cC--------------CCCCcHHHHHHHcCcHHHHHHHHH
Q 045393          223 WHQRNPLHYAAASGNVKMAQRLLEESKRLAYK--------RD--------------CNGETPLHLAAENGKLKVLKLLIN  280 (580)
Q Consensus       223 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--------~~--------------~~g~tpL~~A~~~g~~~~v~~Ll~  280 (580)
                      ..|.||||.|+.+.+.++|+.|++.|+|+...        .|              ..|+.||.+||..++.|++++|++
T Consensus       182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            46899999999999999999999998876321        11              147889999999999999999999


Q ss_pred             hCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcC-cc------
Q 045393          281 KYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRH-KS------  353 (580)
Q Consensus       281 ~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~-~~------  353 (580)
                      +++| ++.+|.+|+|.||..+.+-..++..+++++++. ++...+|++|-|||.+|++.|..++.+.+++. +-      
T Consensus       262 ~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~-~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YG  339 (782)
T KOG3676|consen  262 HGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN-ALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYG  339 (782)
T ss_pred             cCCC-CCccccCCChHHHHHHHHHHHHHHHHHHhcCCC-ccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeec
Confidence            9999 999999999999999999999999999999776 66788999999999999999999999999876 21      


Q ss_pred             ------cccccccccCCCCCHHHHHHH
Q 045393          354 ------VNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       354 ------~d~~~~n~~~~g~t~l~~a~~  374 (580)
                            -|.+..|.-++-.++|++...
T Consensus       340 pvtsslYpL~~iDT~~n~~SvLeivvy  366 (782)
T KOG3676|consen  340 PVTSSLYPLNSIDTIGNENSVLEIVVY  366 (782)
T ss_pred             ccccccccchhcccccchhhhhhhhhc
Confidence                  234444543355678887776


No 60 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.84  E-value=1.5e-20  Score=182.29  Aligned_cols=228  Identities=21%  Similarity=0.245  Sum_probs=181.1

Q ss_pred             HHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIA   83 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~A   83 (580)
                      .++.|+..|+.+-++.++..+...+..+.+|.|+||.+|.-.+.++|++|++.|++         +++.|..|+||||.|
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~---------Vn~~d~e~wtPlhaa  113 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGAN---------VNAQDNEGWTPLHAA  113 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCC---------ccccccccCCcchhh
Confidence            57889999999999999999877788999999999999999999999999999999         999999999999999


Q ss_pred             HHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHH
Q 045393           84 ARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIA  163 (580)
Q Consensus        84 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A  163 (580)
                      +.+|+.+++++|+++|++..             ..|.+|..|+..|...-..++...-...-          |.+ +..+
T Consensus       114 ascg~~~i~~~li~~gA~~~-------------avNsdg~~P~dl~e~ea~~~~l~~~~~r~----------gi~-iea~  169 (527)
T KOG0505|consen  114 ASCGYLNIVEYLIQHGANLL-------------AVNSDGNMPYDLAEDEATLDVLETEMARQ----------GID-IEAA  169 (527)
T ss_pred             cccccHHHHHHHHHhhhhhh-------------hccCCCCCccccccCcchhHHHHHHHHHh----------ccc-HHHH
Confidence            99999999999999999854             46677777777765544444443333221          111 1111


Q ss_pred             HHcCc----HHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChH
Q 045393          164 IDARL----NDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVK  239 (580)
Q Consensus       164 ~~~~~----~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~  239 (580)
                      -....    .++-+++. .+ ........ .|.|.||.|+.+|..+....|++.+.. ++.+|.+|+||||.|+..|..+
T Consensus       170 R~~~e~~ml~D~~q~l~-~G-~~~d~~~~-rG~T~lHvAaa~Gy~e~~~lLl~ag~~-~~~~D~dgWtPlHAAA~Wg~~~  245 (527)
T KOG0505|consen  170 RKAEEQTMLDDARQWLN-AG-AELDARHA-RGATALHVAAANGYTEVAALLLQAGYS-VNIKDYDGWTPLHAAAHWGQED  245 (527)
T ss_pred             hhhhHHHHHHHHHHHHh-cc-cccccccc-ccchHHHHHHhhhHHHHHHHHHHhccC-cccccccCCCcccHHHHhhhHh
Confidence            11111    13333443 44 34444444 589999999999999999999998877 8999999999999999999999


Q ss_pred             HHHHHHHhchhcccccCCCCCcHHHHHHHc
Q 045393          240 MAQRLLEESKRLAYKRDCNGETPLHLAAEN  269 (580)
Q Consensus       240 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~  269 (580)
                      +.+.|+++|++. ......|.+|+..|...
T Consensus       246 ~~elL~~~ga~~-d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  246 ACELLVEHGADM-DAKTKMGETPLDVADEE  274 (527)
T ss_pred             HHHHHHHhhccc-chhhhcCCCCccchhhh
Confidence            999999999988 67788899999888653


No 61 
>PHA02741 hypothetical protein; Provisional
Probab=99.83  E-value=6.9e-20  Score=162.90  Aligned_cols=131  Identities=20%  Similarity=0.286  Sum_probs=90.7

Q ss_pred             ccCCCCCcHHHHHHHcCcHHHHHHHHHh------CCCccccccCCCCCHHHHHHHcCC----HHHHHHHhcCcchhhhcc
Q 045393          254 KRDCNGETPLHLAAENGKLKVLKLLINK------YPDAIEIRNNSDRSILHVAAKHGN----WNIVSFILRSPEMENLIN  323 (580)
Q Consensus       254 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~------~~~~~~~~d~~g~t~Lh~A~~~~~----~~iv~~Ll~~~~~~~~~n  323 (580)
                      .++..|.||||+|++.|+.++++.|+..      +++ ++.+|..|+||||+|+..|+    .+++++|++.   ++++|
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~---gadin   91 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA-LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL---GADIN   91 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh-hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc---CCCCC
Confidence            4456677777777777777777776532      244 66777777777777777777    4677777776   34477


Q ss_pred             cccC-CCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhh
Q 045393          324 LVDR-NGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAK  397 (580)
Q Consensus       324 ~~d~-~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~  397 (580)
                      .+|. +|+||||+|+..++.+++++|+...|++++.+|.  +|+|||++|..       ....++++.|++.++.
T Consensus        92 ~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~--~g~tpL~~A~~-------~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         92 AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA--DNKSPFELAID-------NEDVAMMQILREIVAT  157 (169)
T ss_pred             CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC--CCCCHHHHHHH-------CCCHHHHHHHHHHHHH
Confidence            7764 7777777777777777777777655777777777  77777777776       3345666777766654


No 62 
>PHA02741 hypothetical protein; Provisional
Probab=99.82  E-value=1.8e-19  Score=160.25  Aligned_cols=130  Identities=21%  Similarity=0.294  Sum_probs=113.2

Q ss_pred             ccccCCCCChHHHHHHHcCChHHHHHHHHh------chhcccccCCCCCcHHHHHHHcCc----HHHHHHHHHhCCCccc
Q 045393          218 IDRLDWHQRNPLHYAAASGNVKMAQRLLEE------SKRLAYKRDCNGETPLHLAAENGK----LKVLKLLINKYPDAIE  287 (580)
Q Consensus       218 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~------~~~~~~~~~~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~  287 (580)
                      ++.++..|.||||+|++.|+.++++.|+..      +++. +.+|..|.||||+|+..|+    .+++++|++++++ ++
T Consensus        14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad-in   91 (169)
T PHA02741         14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD-IN   91 (169)
T ss_pred             hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC-CC
Confidence            455678899999999999999999998653      3444 6788899999999999998    5899999999999 78


Q ss_pred             cccC-CCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcC
Q 045393          288 IRNN-SDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRH  351 (580)
Q Consensus       288 ~~d~-~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~  351 (580)
                      .+|. .|+||||+|+.+++.+++++|++..  +.+++.+|.+|.||||+|+..++.++++.|++.
T Consensus        92 ~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~--g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~  154 (169)
T PHA02741         92 AQEMLEGDTALHLAAHRRDHDLAEWLCCQP--GIDLHFCNADNKSPFELAIDNEDVAMMQILREI  154 (169)
T ss_pred             CCCcCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHH
Confidence            8885 8999999999999999999999741  345889999999999999999999999999865


No 63 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.81  E-value=1.1e-19  Score=160.84  Aligned_cols=139  Identities=20%  Similarity=0.184  Sum_probs=119.5

Q ss_pred             chhcccccCCCCCcHHHHHHHcCcH----HHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHH---HHHHhcCcchhh
Q 045393          248 SKRLAYKRDCNGETPLHLAAENGKL----KVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNI---VSFILRSPEMEN  320 (580)
Q Consensus       248 ~~~~~~~~~~~g~tpL~~A~~~g~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~i---v~~Ll~~~~~~~  320 (580)
                      +.+. +..+.++.+++|.|++.|+.    +++++|.+.+++ ++.+|..|+||||+|+.+|+.+.   +++|++.+   +
T Consensus        10 ~~~~-~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~-~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G---a   84 (166)
T PHA02743         10 NLGA-VEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHL-LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG---A   84 (166)
T ss_pred             chHH-hhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh-hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC---C
Confidence            3444 44567888999999999998    566677888887 78899999999999999998664   78999984   5


Q ss_pred             hccccc-CCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhhhh
Q 045393          321 LINLVD-RNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAKRA  399 (580)
Q Consensus       321 ~~n~~d-~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~~  399 (580)
                      ++|.+| ..|+||||+|+..++.+++++|+.+.|++++.+|.  .|+|||++|..       ....+++++|+++|++..
T Consensus        85 din~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~--~g~tpL~~A~~-------~~~~~iv~~Ll~~ga~~~  155 (166)
T PHA02743         85 DINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINY--QHETAYHIAYK-------MRDRRMMEILRANGAVCD  155 (166)
T ss_pred             CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCC--CCCCHHHHHHH-------cCCHHHHHHHHHcCCCCC
Confidence            599998 58999999999999999999999767999999999  99999999998       445688999999999875


Q ss_pred             c
Q 045393          400 L  400 (580)
Q Consensus       400 ~  400 (580)
                      +
T Consensus       156 ~  156 (166)
T PHA02743        156 D  156 (166)
T ss_pred             C
Confidence            5


No 64 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.80  E-value=2.3e-19  Score=157.37  Aligned_cols=134  Identities=20%  Similarity=0.292  Sum_probs=108.1

Q ss_pred             ccccCCCCChHHHHHHHcCChHHHHHHHHhch------hcccccCCCCCcHHHHHHHcCcH---HHHHHHHHhCCCcccc
Q 045393          218 IDRLDWHQRNPLHYAAASGNVKMAQRLLEESK------RLAYKRDCNGETPLHLAAENGKL---KVLKLLINKYPDAIEI  288 (580)
Q Consensus       218 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~------~~~~~~~~~g~tpL~~A~~~g~~---~~v~~Ll~~~~~~~~~  288 (580)
                      .+.+|.+|.||||+|++.|+.  ++.+...+.      .....+|..|.||||+|+..|+.   +++++|++.|++ ++.
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad-in~   86 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD-ING   86 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC-ccc
Confidence            566788899999999999983  333332221      11234688999999999999987   468899999998 788


Q ss_pred             cc-CCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccc
Q 045393          289 RN-NSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIR  357 (580)
Q Consensus       289 ~d-~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~  357 (580)
                      +| ..|+||||+|+..++.+++++|++..  +.+++.+|..|.||||+|+..++.++++.|+.+ |++.+
T Consensus        87 ~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~--g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~-ga~~~  153 (154)
T PHA02736         87 KERVFGNTPLHIAVYTQNYELATWLCNQP--GVNMEILNYAFKTPYYVACERHDAKMMNILRAK-GAQCK  153 (154)
T ss_pred             cCCCCCCcHHHHHHHhCCHHHHHHHHhCC--CCCCccccCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCC
Confidence            87 58999999999999999999999742  345899999999999999999999999999864 66654


No 65 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.79  E-value=2.2e-18  Score=163.97  Aligned_cols=156  Identities=17%  Similarity=0.138  Sum_probs=118.5

Q ss_pred             ccccCCCCCh-HHHHHHHcCChHHHHHHHHhchhccccc----CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccc-cC
Q 045393          218 IDRLDWHQRN-PLHYAAASGNVKMAQRLLEESKRLAYKR----DCNGETPLHLAAENGKLKVLKLLINKYPDAIEIR-NN  291 (580)
Q Consensus       218 ~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~----~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~-d~  291 (580)
                      +..+|..|+| +||.|++.|+.+++++|+++|+++ +.+    +..|.||||+|+..|+.+++++|+++|++ ++.+ +.
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD-VN~~~~~  102 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD-VNRYAEE  102 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cCcccCC
Confidence            3445556655 466667778899999999999887 444    45789999999999999999999999988 7775 45


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHH
Q 045393          292 SDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEI  371 (580)
Q Consensus       292 ~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~  371 (580)
                      .|.||||+|+..++.+++++|++.|   ++++.+|..|.||||+|+..++.+++..+.   |..   .+.  .+.+|..+
T Consensus       103 ~g~TpLh~Aa~~~~~eivklLL~~G---Adin~kd~~G~TpL~~A~~~~~~~~~~~~~---~~~---~~~--~~~~~~~~  171 (300)
T PHA02884        103 AKITPLYISVLHGCLKCLEILLSYG---ADINIQTNDMVTPIELALMICNNFLAFMIC---DNE---ISN--FYKHPKKI  171 (300)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHhCChhHHHHhc---CCc---ccc--cccChhhh
Confidence            7899999999999999999999884   458889999999999999888888775554   222   344  66777775


Q ss_pred             HHHHhhCChhhHHHHHHHHHHHhhh
Q 045393          372 AEITRANGKEIQKHLTLKALKTAYA  396 (580)
Q Consensus       372 a~~~~~~~~~~~~~~~~~~L~~~ga  396 (580)
                      ..          ..++.+.|++++.
T Consensus       172 ~~----------n~ei~~~Lish~v  186 (300)
T PHA02884        172 LI----------NFDILKILVSHFI  186 (300)
T ss_pred             hc----------cHHHHHHHHHHHH
Confidence            42          2456667777666


No 66 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78  E-value=5.7e-19  Score=154.87  Aligned_cols=132  Identities=22%  Similarity=0.229  Sum_probs=109.5

Q ss_pred             cccCCCCCcHHHHHHHcCcHHHHHHHHHhCC------CccccccCCCCCHHHHHHHcCCHH---HHHHHhcCcchhhhcc
Q 045393          253 YKRDCNGETPLHLAAENGKLKVLKLLINKYP------DAIEIRNNSDRSILHVAAKHGNWN---IVSFILRSPEMENLIN  323 (580)
Q Consensus       253 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~------~~~~~~d~~g~t~Lh~A~~~~~~~---iv~~Ll~~~~~~~~~n  323 (580)
                      +.+|..|.||||+|++.|+.  ++++...+.      ..+..+|..|+||||+|+..++.+   ++++|++.+   +++|
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g---adin   85 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG---ADIN   85 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC---CCcc
Confidence            55688899999999999984  333332221      124457899999999999999874   688999984   5599


Q ss_pred             ccc-CCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhhh
Q 045393          324 LVD-RNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAKR  398 (580)
Q Consensus       324 ~~d-~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~  398 (580)
                      .+| .+|+||||+|+..++.+++++|+.+.|++++.+|.  .|+|||++|..       ....++++.|++.|++.
T Consensus        86 ~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~--~g~tpL~~A~~-------~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         86 GKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNY--AFKTPYYVACE-------RHDAKMMNILRAKGAQC  152 (154)
T ss_pred             ccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccC--CCCCHHHHHHH-------cCCHHHHHHHHHcCCCC
Confidence            998 49999999999999999999999877999999999  99999999997       45678889999998864


No 67 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.77  E-value=3e-19  Score=159.13  Aligned_cols=134  Identities=28%  Similarity=0.400  Sum_probs=108.3

Q ss_pred             HcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHh
Q 045393          234 ASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFIL  313 (580)
Q Consensus       234 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll  313 (580)
                      +.|+.-.|+.-++......+.-|..|.+|||+||+.|+..+++.|+.+|+. ++..|....||||+|+.+|+.++|+.|+
T Consensus         9 regna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrdivqkll   87 (448)
T KOG0195|consen    9 REGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIVQKLL   87 (448)
T ss_pred             hcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHHHHHHHH
Confidence            334433333334433333467778889999999999999999999999888 7888887889999999999999999999


Q ss_pred             cCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          314 RSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       314 ~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      +.   .+++|+.+..|+||||||+..|+..+.+-|+.. |+.+++-|+  +|.||++-|..
T Consensus        88 ~~---kadvnavnehgntplhyacfwgydqiaedli~~-ga~v~icnk--~g~tpldkakp  142 (448)
T KOG0195|consen   88 SR---KADVNAVNEHGNTPLHYACFWGYDQIAEDLISC-GAAVNICNK--KGMTPLDKAKP  142 (448)
T ss_pred             HH---hcccchhhccCCCchhhhhhhcHHHHHHHHHhc-cceeeeccc--CCCCchhhhch
Confidence            87   566899999999999999999998899888865 889999999  99999998865


No 68 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.77  E-value=6.9e-18  Score=160.57  Aligned_cols=149  Identities=21%  Similarity=0.212  Sum_probs=124.7

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhhCCcccccc----CCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHH
Q 045393          190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRL----DWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHL  265 (580)
Q Consensus       190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~----d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~  265 (580)
                      ...++||.|+..++.++++.|++.|.+ ++.+    +..|.||||+|+..++.+++++|+++|+++....+..|.||||.
T Consensus        32 ~~~~lL~~A~~~~~~eivk~LL~~GAd-iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~  110 (300)
T PHA02884         32 CIANILYSSIKFHYTDIIDAILKLGAD-PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYI  110 (300)
T ss_pred             CCCHHHHHHHHcCCHHHHHHHHHCCCC-ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHH
Confidence            444567777777888888888888875 6665    45899999999999999999999999999843345679999999


Q ss_pred             HHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHH
Q 045393          266 AAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVV  345 (580)
Q Consensus       266 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~  345 (580)
                      |+..|+.+++++|+++|++ ++.+|..|.||||+|++.++.+++..+...        ..+..+.+|++++   ++.+++
T Consensus       111 Aa~~~~~eivklLL~~GAd-in~kd~~G~TpL~~A~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---~n~ei~  178 (300)
T PHA02884        111 SVLHGCLKCLEILLSYGAD-INIQTNDMVTPIELALMICNNFLAFMICDN--------EISNFYKHPKKIL---INFDIL  178 (300)
T ss_pred             HHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCChhHHHHhcCC--------cccccccChhhhh---ccHHHH
Confidence            9999999999999999999 899999999999999999999988666532        2567788999975   467899


Q ss_pred             HHhhcC
Q 045393          346 FTLSRH  351 (580)
Q Consensus       346 ~~Ll~~  351 (580)
                      +.|+.+
T Consensus       179 ~~Lish  184 (300)
T PHA02884        179 KILVSH  184 (300)
T ss_pred             HHHHHH
Confidence            988865


No 69 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.76  E-value=1.3e-17  Score=137.64  Aligned_cols=144  Identities=20%  Similarity=0.159  Sum_probs=119.3

Q ss_pred             hhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhh
Q 045393           37 VLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFR  116 (580)
Q Consensus        37 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~  116 (580)
                      .+.+|+..+....|+.||+..++        .++.+|.+|.||||-|+.+|+.+||+.|+..|++.+             
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an--------~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~-------------  124 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKAN--------HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE-------------  124 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccc--------cccccccccccHHHHHHhcCchHHHHHHHHccCCcc-------------
Confidence            46789999999999999999998        899999999999999999999999999999999876             


Q ss_pred             ccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHH-HHHHHHhcCCCCcCCCCCCCCccHH
Q 045393          117 MTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLND-IACFIIDKSPESLNTTRLPDELTLI  195 (580)
Q Consensus       117 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~~~~~t~L  195 (580)
                      .+...|+||||-||+..+.+++-+|+++|++++. ......||||+|+...+.. .+.+|+......+..... .+.+|+
T Consensus       125 a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA-~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn-~eeta~  202 (228)
T KOG0512|consen  125 AKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNA-QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNN-LEETAF  202 (228)
T ss_pred             cccccCccchhhhhcccchhHHHHHHhccCcccc-cccccchhhHHhhcccchHHHHHHHhhccccChhhhcC-ccchHH
Confidence            4678999999999999999999999999999984 5667789999998877654 445555443333333333 677777


Q ss_pred             HHHHHcCC
Q 045393          196 HFVVMRQN  203 (580)
Q Consensus       196 ~~A~~~~~  203 (580)
                      .+|-+.+-
T Consensus       203 ~iARRT~~  210 (228)
T KOG0512|consen  203 DIARRTSM  210 (228)
T ss_pred             HHHHHhhh
Confidence            77766543


No 70 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.72  E-value=3.9e-18  Score=152.10  Aligned_cols=137  Identities=25%  Similarity=0.345  Sum_probs=122.2

Q ss_pred             HHHHHHHcCCHHHHHHHhhhc-CcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQ-DIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI   82 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~   82 (580)
                      .++--|++||--.++..++.. ...+..|..|.+|||+||+.|+..+|+.|+.+|+.         ++..|...+||||+
T Consensus         3 dif~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgar---------vn~tnmgddtplhl   73 (448)
T KOG0195|consen    3 DIFGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR---------VNSTNMGDDTPLHL   73 (448)
T ss_pred             hhhhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccc---------cccccCCCCcchhh
Confidence            345567788877777777654 45566888999999999999999999999999999         89999999999999


Q ss_pred             HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHH
Q 045393           83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSI  162 (580)
Q Consensus        83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~  162 (580)
                      |+..||.++|+.|++..+|+|             ..|+.|+|||||||..|...+.+-|+..|+..+ ..++.|.|||..
T Consensus        74 aaahghrdivqkll~~kadvn-------------avnehgntplhyacfwgydqiaedli~~ga~v~-icnk~g~tpldk  139 (448)
T KOG0195|consen   74 AAAHGHRDIVQKLLSRKADVN-------------AVNEHGNTPLHYACFWGYDQIAEDLISCGAAVN-ICNKKGMTPLDK  139 (448)
T ss_pred             hhhcccHHHHHHHHHHhcccc-------------hhhccCCCchhhhhhhcHHHHHHHHHhccceee-ecccCCCCchhh
Confidence            999999999999999988876             589999999999999999999999999999776 689999999987


Q ss_pred             H
Q 045393          163 A  163 (580)
Q Consensus       163 A  163 (580)
                      |
T Consensus       140 a  140 (448)
T KOG0195|consen  140 A  140 (448)
T ss_pred             h
Confidence            6


No 71 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.72  E-value=1.7e-15  Score=154.73  Aligned_cols=188  Identities=21%  Similarity=0.222  Sum_probs=151.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHhhC--------CccccccCCCCChHHHHHHHc---CChHHHHHHHHhchhcccc----cCC
Q 045393          193 TLIHFVVMRQNYDIMVKILGTN--------KELIDRLDWHQRNPLHYAAAS---GNVKMAQRLLEESKRLAYK----RDC  257 (580)
Q Consensus       193 t~L~~A~~~~~~~~~~~Ll~~~--------~~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~----~~~  257 (580)
                      .++..+...+..+....++...        ....+.+...|.|.||.|.-+   ++.++++.|++.-+...+.    ...
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            5666676677766666665544        233666677899999999874   4568999999987654332    234


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHhCCCccccc---------cC--------------CCCCHHHHHHHcCCHHHHHHHhc
Q 045393          258 NGETPLHLAAENGKLKVLKLLINKYPDAIEIR---------NN--------------SDRSILHVAAKHGNWNIVSFILR  314 (580)
Q Consensus       258 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~---------d~--------------~g~t~Lh~A~~~~~~~iv~~Ll~  314 (580)
                      .|+||||+|+.+.+.++|++|++.|+| ++.+         |.              .|+.||-+|+.-++.|++++|++
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gAD-V~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGAD-VHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCc-hhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            699999999999999999999999998 4432         21              47899999999999999999999


Q ss_pred             CcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccc--cccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHH
Q 045393          315 SPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVN--IRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALK  392 (580)
Q Consensus       315 ~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d--~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~  392 (580)
                      +   ++++|++|.+|||.||..+..-..++...+++. |++  ..++|+  +|.|||.+|+.       ..+.++.+.++
T Consensus       262 ~---gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~-ga~~l~~v~N~--qgLTPLtLAak-------lGk~emf~~il  328 (782)
T KOG3676|consen  262 H---GADPNAQDSNGNTVLHMLVIHFVTEMYDLALEL-GANALEHVRNN--QGLTPLTLAAK-------LGKKEMFQHIL  328 (782)
T ss_pred             c---CCCCCccccCCChHHHHHHHHHHHHHHHHHHhc-CCCcccccccc--CCCChHHHHHH-------hhhHHHHHHHH
Confidence            8   666999999999999999999888899999876 777  889999  99999999998       56667766666


Q ss_pred             Hh
Q 045393          393 TA  394 (580)
Q Consensus       393 ~~  394 (580)
                      +.
T Consensus       329 e~  330 (782)
T KOG3676|consen  329 ER  330 (782)
T ss_pred             Hh
Confidence            65


No 72 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.67  E-value=2.7e-16  Score=123.91  Aligned_cols=89  Identities=42%  Similarity=0.631  Sum_probs=63.2

Q ss_pred             HHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCCh
Q 045393          263 LHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHS  342 (580)
Q Consensus       263 L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~  342 (580)
                      ||+|++.|+.+++++|++.+.+ ++.    |+||||+|+.+|+.+++++|++.+   .+++.+|.+|+||||+|+.+|+.
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~   72 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGAD-INL----GNTALHYAAENGNLEIVKLLLENG---ADINSQDKNGNTALHYAAENGNL   72 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTST-TTS----SSBHHHHHHHTTTHHHHHHHHHTT---TCTT-BSTTSSBHHHHHHHTTHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCC-CCC----CCCHHHHHHHcCCHHHHHHHHHhc---ccccccCCCCCCHHHHHHHcCCH
Confidence            5777777777777777776665 333    777777777777777777777763   34777777777777777777777


Q ss_pred             hHHHHhhcCccccccccc
Q 045393          343 DVVFTLSRHKSVNIRAKN  360 (580)
Q Consensus       343 ~~~~~Ll~~~~~d~~~~n  360 (580)
                      +++++|+++ |++++.+|
T Consensus        73 ~~~~~Ll~~-g~~~~~~n   89 (89)
T PF12796_consen   73 EIVKLLLEH-GADVNIRN   89 (89)
T ss_dssp             HHHHHHHHT-TT-TTSS-
T ss_pred             HHHHHHHHc-CCCCCCcC
Confidence            777777765 77777664


No 73 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.65  E-value=2e-15  Score=127.50  Aligned_cols=124  Identities=41%  Similarity=0.661  Sum_probs=106.8

Q ss_pred             cCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHH
Q 045393          221 LDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVA  300 (580)
Q Consensus       221 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A  300 (580)
                      .|.+|.||||.|+..++.+++++|++.+.+. +..+..|.+|+|.|+..++.+++++|++.++. ++..+..|.||+|+|
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~~~l~~a   80 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLA   80 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHH
Confidence            4567889999999999999999999888776 56778899999999999999999999998876 677788899999999


Q ss_pred             HHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhh
Q 045393          301 AKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLS  349 (580)
Q Consensus       301 ~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll  349 (580)
                      ++.++.+++++|++.+   ..++..|..|.||+|+|...++.+++++|+
T Consensus        81 ~~~~~~~~~~~L~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          81 ARNGNLDVVKLLLKHG---ADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHcCcHHHHHHHHHcC---CCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999874   347778888999999999998888888774


No 74 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.65  E-value=1e-15  Score=120.62  Aligned_cols=86  Identities=29%  Similarity=0.427  Sum_probs=76.0

Q ss_pred             hhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhc
Q 045393           38 LHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRM  117 (580)
Q Consensus        38 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~  117 (580)
                      ||+|++.|+.+++++|++.+.+         ++.    |+||||+|+..|+.+++++|+++|++++             .
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~---------~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~-------------~   54 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGAD---------INL----GNTALHYAAENGNLEIVKLLLENGADIN-------------S   54 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTST---------TTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT--------------
T ss_pred             CHHHHHcCCHHHHHHHHHCcCC---------CCC----CCCHHHHHHHcCCHHHHHHHHHhccccc-------------c
Confidence            7999999999999999998877         333    8899999999999999999999998876             4


Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q 045393          118 TDIEGNTPLHNAVTNQHKRVIRILVEKDSVPS  149 (580)
Q Consensus       118 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~  149 (580)
                      +|.+|.||||+|+.+|+.+++++|+++|++++
T Consensus        55 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~   86 (89)
T PF12796_consen   55 QDKNGNTALHYAAENGNLEIVKLLLEHGADVN   86 (89)
T ss_dssp             BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TT
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            77899999999999999999999999998776


No 75 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.63  E-value=7.5e-15  Score=123.96  Aligned_cols=124  Identities=27%  Similarity=0.377  Sum_probs=103.6

Q ss_pred             cCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcc
Q 045393           30 SSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAP  109 (580)
Q Consensus        30 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~  109 (580)
                      .+.+|.||||+|+..|+.+++++|++.+.+         .+.++..|.||||.|+..++.++++.|++.++..+      
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~---------~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~------   67 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD---------VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN------   67 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC---------CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc------
Confidence            456788999999999999999999998887         57788889999999999999999999999886543      


Q ss_pred             hhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHH
Q 045393          110 VLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFII  176 (580)
Q Consensus       110 ~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll  176 (580)
                             ..+..|.||+|+|++.++.+++++|++++.+.. ..+..+.||++.|...++.+++++|+
T Consensus        68 -------~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          68 -------ARDKDGNTPLHLAARNGNLDVVKLLLKHGADVN-ARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             -------ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence                   356788899999999999999999999886555 45677888999988888888888763


No 76 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.53  E-value=3.7e-14  Score=104.36  Aligned_cols=93  Identities=17%  Similarity=0.169  Sum_probs=84.4

Q ss_pred             CHHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHH
Q 045393            2 DQELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALH   81 (580)
Q Consensus         2 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh   81 (580)
                      |.++.+++++|+++-++.....+...+ ....|++|||+|+.+|..+++++|+..|++         ++.+|+.|-|||.
T Consensus         3 d~~~~W~vkNG~~DeVk~~v~~g~nVn-~~~ggR~plhyAAD~GQl~ilefli~iGA~---------i~~kDKygITPLL   72 (117)
T KOG4214|consen    3 DMSVAWNVKNGEIDEVKQSVNEGLNVN-EIYGGRTPLHYAADYGQLSILEFLISIGAN---------IQDKDKYGITPLL   72 (117)
T ss_pred             chhHhhhhccCcHHHHHHHHHccccHH-HHhCCcccchHhhhcchHHHHHHHHHhccc---------cCCccccCCcHHH
Confidence            467889999999999999999884333 445899999999999999999999999999         9999999999999


Q ss_pred             HHHHhCCHHHHHHHHhcCccccc
Q 045393           82 IAARIGDRAIVSEIMKYLPAVNQ  104 (580)
Q Consensus        82 ~Aa~~g~~~~v~~Ll~~~~~~~~  104 (580)
                      .|+..||.++|++|+++|++-..
T Consensus        73 sAvwEGH~~cVklLL~~GAdrt~   95 (117)
T KOG4214|consen   73 SAVWEGHRDCVKLLLQNGADRTI   95 (117)
T ss_pred             HHHHHhhHHHHHHHHHcCcccce
Confidence            99999999999999999998653


No 77 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.50  E-value=5.6e-13  Score=125.63  Aligned_cols=130  Identities=34%  Similarity=0.447  Sum_probs=113.2

Q ss_pred             ccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCc-----HHHHHHHHHhCC--Ccccccc
Q 045393          218 IDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGK-----LKVLKLLINKYP--DAIEIRN  290 (580)
Q Consensus       218 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~-----~~~v~~Ll~~~~--~~~~~~d  290 (580)
                      ....+..+.++++.++..+..+.+++++..+.++ +.++..|.||||+|+..++     .+++++|++.++  +..+.+|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~  144 (235)
T COG0666          66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD  144 (235)
T ss_pred             cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence            4455667889999999999999999999999888 8889999999999999999     899999999999  5577789


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcC
Q 045393          291 NSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRH  351 (580)
Q Consensus       291 ~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~  351 (580)
                      ..|+||||+|+..|+.+++++|++.+   ++++.++..|.|+++.|+..++.++++.++..
T Consensus       145 ~~g~tpl~~A~~~~~~~~~~~ll~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~  202 (235)
T COG0666         145 EDGNTPLHWAALNGDADIVELLLEAG---ADPNSRNSYGVTALDPAAKNGRIELVKLLLDK  202 (235)
T ss_pred             CCCCchhHHHHHcCchHHHHHHHhcC---CCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence            99999999999999999999999884   44788889999999999999999999888864


No 78 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.49  E-value=1.2e-13  Score=101.76  Aligned_cols=105  Identities=24%  Similarity=0.282  Sum_probs=80.3

Q ss_pred             HHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCC
Q 045393          262 PLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLH  341 (580)
Q Consensus       262 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~  341 (580)
                      -+.+++++|..+-|+.....+-+ ++..- .|++|||+|+.+|+.+++++|+..   +++++.+|+.|-|||--|+..||
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g~n-Vn~~~-ggR~plhyAAD~GQl~ilefli~i---GA~i~~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEGLN-VNEIY-GGRTPLHYAADYGQLSILEFLISI---GANIQDKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHcccc-HHHHh-CCcccchHhhhcchHHHHHHHHHh---ccccCCccccCCcHHHHHHHHhh
Confidence            45677788888888877777755 33322 678888888888888888888887   44488888888888888888888


Q ss_pred             hhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          342 SDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       342 ~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      .++|++||++ |+|...+..  +|.+.++.+..
T Consensus        80 ~~cVklLL~~-GAdrt~~~P--dG~~~~eate~  109 (117)
T KOG4214|consen   80 RDCVKLLLQN-GADRTIHAP--DGTALIEATEE  109 (117)
T ss_pred             HHHHHHHHHc-CcccceeCC--CchhHHhhccH
Confidence            8888888865 888877777  88887776654


No 79 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.42  E-value=6.3e-12  Score=118.37  Aligned_cols=125  Identities=31%  Similarity=0.456  Sum_probs=117.9

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCC-----hHHHHHHHHhch--hcccccCCCCCcH
Q 045393          190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGN-----VKMAQRLLEESK--RLAYKRDCNGETP  262 (580)
Q Consensus       190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~-----~~~v~~Ll~~~~--~~~~~~~~~g~tp  262 (580)
                      .+.++++.++..+..+.+..++..+.+ ++.++..|.||||+|+..++     .++++.|++.|+  +....++..|.||
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tp  150 (235)
T COG0666          72 DGRLPLHSAASKGDDKIVKLLLASGAD-VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTP  150 (235)
T ss_pred             cccCHHHHHHHcCcHHHHHHHHHcCCC-cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCch
Confidence            688999999999999999999999888 59999999999999999999     999999999999  6767889999999


Q ss_pred             HHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCc
Q 045393          263 LHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSP  316 (580)
Q Consensus       263 L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~  316 (580)
                      ||+|+..|+.++++.|++.+++ ++.++..|.|+++.|+..++.++++.+++.+
T Consensus       151 l~~A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         151 LHWAALNGDADIVELLLEAGAD-PNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hHHHHHcCchHHHHHHHhcCCC-CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            9999999999999999999999 8889999999999999999999999999863


No 80 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.37  E-value=3.8e-12  Score=114.18  Aligned_cols=124  Identities=23%  Similarity=0.250  Sum_probs=113.6

Q ss_pred             CCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHc
Q 045393          190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAEN  269 (580)
Q Consensus       190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~  269 (580)
                      ....||.-++..++.+....|+..-. .++.+|.+|+++|..|+..|+.++++.|++.|+|++..++..+.||||+|+..
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~vr-~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS   89 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLSTVR-QVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS   89 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHHhh-hhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence            45678888888999999999888743 48999999999999999999999999999999999888888999999999999


Q ss_pred             CcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcC
Q 045393          270 GKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRS  315 (580)
Q Consensus       270 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  315 (580)
                      |+.++.++|++.|+. ....|.-|+|+-.+|+.-|+.++|..+-++
T Consensus        90 Gn~dvcrllldaGa~-~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   90 GNQDVCRLLLDAGAR-MYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             CCchHHHHHHhccCc-cccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            999999999999999 888999999999999999999999887655


No 81 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.35  E-value=2e-12  Score=90.56  Aligned_cols=54  Identities=28%  Similarity=0.397  Sum_probs=46.0

Q ss_pred             CCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHH
Q 045393           34 GNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIM   96 (580)
Q Consensus        34 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll   96 (580)
                      |.||||+|++.|+.+++++|+++|.+         ++.+|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d---------in~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD---------INAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG---------TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC---------CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            68999999999999999999999988         8889999999999999999999999986


No 82 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35  E-value=2.8e-12  Score=124.09  Aligned_cols=120  Identities=15%  Similarity=0.108  Sum_probs=103.6

Q ss_pred             HHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIA   83 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~A   83 (580)
                      .|..|+..|.+|+|+..+.+-.+..+-+..|-|+||-|+-.||.+||++|++.|++         +|..|++|+||||+|
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan---------VNa~DSdGWTPLHCA  623 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN---------VNAADSDGWTPLHCA  623 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc---------ccCccCCCCchhhhh
Confidence            47889999999999999998777777788999999999999999999999999999         999999999999999


Q ss_pred             HHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHH--HcCcHHHHHHHHHc
Q 045393           84 ARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAV--TNQHKRVIRILVEK  144 (580)
Q Consensus        84 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~--~~~~~~~v~~Ll~~  144 (580)
                      |.+++..+++.|++.|+.+..            .+-.++.|+..-+-  +.|...|.+||..-
T Consensus       624 ASCNnv~~ckqLVe~GaavfA------------sTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  624 ASCNNVPMCKQLVESGAAVFA------------STLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             hhcCchHHHHHHHhccceEEe------------eecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            999999999999999987542            35567778766543  45777888888653


No 83 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.34  E-value=5.8e-13  Score=93.63  Aligned_cols=50  Identities=40%  Similarity=0.441  Sum_probs=24.0

Q ss_pred             hhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHH
Q 045393          320 NLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIA  372 (580)
Q Consensus       320 ~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a  372 (580)
                      .++|.+|..|+||||+|+.+|+.+++++|+ ..|+|++++|.  +|+||+|+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll-~~g~d~~~~d~--~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLL-QNGADPNAKDK--DGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-HHHHHHHH-HCT--TT---T--TS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcHHHHHHHH-HCcCCCCCCcC--CCCCHHHhC
Confidence            446677777777777777777777777777 45777777777  777777765


No 84 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.34  E-value=6.9e-12  Score=112.53  Aligned_cols=120  Identities=18%  Similarity=0.168  Sum_probs=108.5

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393            3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI   82 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~   82 (580)
                      ++|+.++..||.+....|++.-...+.+|+.|.|+|..|+..|+.++|+.|++.|++        .-..++..+.||||+
T Consensus        14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaD--------vN~~qhg~~YTpLmF   85 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGAD--------VNDKQHGTLYTPLMF   85 (396)
T ss_pred             hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCC--------cCcccccccccHHHH
Confidence            589999999999999999998776788999999999999999999999999999999        344567789999999


Q ss_pred             HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHH
Q 045393           83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVE  143 (580)
Q Consensus        83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~  143 (580)
                      |+.+|+.++.+.|++.|+...             ..|.-|+|+-..|+--|+.++|..+-+
T Consensus        86 AALSGn~dvcrllldaGa~~~-------------~vNsvgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen   86 AALSGNQDVCRLLLDAGARMY-------------LVNSVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             HHHcCCchHHHHHHhccCccc-------------cccchhhhHHHHHHHhcchHHHHHHhc
Confidence            999999999999999998764             467889999999999999999987644


No 85 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.33  E-value=1.1e-12  Score=92.30  Aligned_cols=56  Identities=30%  Similarity=0.504  Sum_probs=27.6

Q ss_pred             HHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHH
Q 045393          278 LINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLA  336 (580)
Q Consensus       278 Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A  336 (580)
                      |+++++..++.+|..|+||||+|+.+|+.+++++|++.   +.+++.+|.+|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~---g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQN---GADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHC---T--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHC---cCCCCCCcCCCCCHHHhC
Confidence            45666444777888888888888888888888888866   445788888888888876


No 86 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.32  E-value=3.7e-12  Score=89.16  Aligned_cols=53  Identities=43%  Similarity=0.551  Sum_probs=22.1

Q ss_pred             CCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHh
Q 045393          293 DRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTL  348 (580)
Q Consensus       293 g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~L  348 (580)
                      |+||||+|++.|+.+++++|++.+   .++|.+|.+|+||||+|+..|+.+++++|
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~---~din~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHG---ADINAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTT---SGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            344444444444444444444442   22444444455555555554444444444


No 87 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32  E-value=4.8e-12  Score=122.47  Aligned_cols=120  Identities=22%  Similarity=0.218  Sum_probs=99.8

Q ss_pred             hhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhh
Q 045393           37 VLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFR  116 (580)
Q Consensus        37 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~  116 (580)
                      .|.-|+..|.+|+|+..+.+-.+         +...|..|-|+||-|+..||.+||++|++.|+++|             
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~D---------pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVN-------------  610 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTD---------PSQPNDEGITALHNAICAGHYEIVKFLIEFGANVN-------------  610 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcC---------CCCCCccchhHHhhhhhcchhHHHHHHHhcCCccc-------------
Confidence            35568889999999999988777         78888999999999999999999999999999877             


Q ss_pred             ccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHH--HHcCcHHHHHHHHhc
Q 045393          117 MTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIA--IDARLNDIACFIIDK  178 (580)
Q Consensus       117 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A--~~~~~~~~v~~Ll~~  178 (580)
                      ..|.+|+||||+|+.+++..+++.|++.|+-+....-.+++|+..-+  .+.|..++.+||..-
T Consensus       611 a~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  611 AADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             CccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            58899999999999999999999999999877766666777776543  345677888888653


No 88 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.32  E-value=5.1e-12  Score=136.05  Aligned_cols=109  Identities=27%  Similarity=0.350  Sum_probs=92.8

Q ss_pred             hHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCH
Q 045393          227 NPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNW  306 (580)
Q Consensus       227 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~  306 (580)
                      +.|+.|+..|+.+.++.|++.|+++ +.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+.+|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn~~d~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLDKDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcH
Confidence            5688899999999999999999887 67788999999999999999999999999998 888999999999999999999


Q ss_pred             HHHHHHhcC----cchhhhcccccCCCCcHHHHHH
Q 045393          307 NIVSFILRS----PEMENLINLVDRNGNTPLHLAA  337 (580)
Q Consensus       307 ~iv~~Ll~~----~~~~~~~n~~d~~G~T~Lh~A~  337 (580)
                      +++++|+++    ...++..+..+..|.+|+..+.
T Consensus       162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            999999987    2223456777788888876554


No 89 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.26  E-value=1.9e-11  Score=131.64  Aligned_cols=106  Identities=25%  Similarity=0.262  Sum_probs=95.3

Q ss_pred             cHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcH
Q 045393          193 TLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKL  272 (580)
Q Consensus       193 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~  272 (580)
                      ..|+.|+..|+.+.++.|++.+.+ ++..|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCcH
Confidence            468899999999999999998866 8999999999999999999999999999999988 78899999999999999999


Q ss_pred             HHHHHHHHh-------CCCccccccCCCCCHHHHHH
Q 045393          273 KVLKLLINK-------YPDAIEIRNNSDRSILHVAA  301 (580)
Q Consensus       273 ~~v~~Ll~~-------~~~~~~~~d~~g~t~Lh~A~  301 (580)
                      +++++|+++       +++ .+..+..|.+|+..+.
T Consensus       162 ~iv~~Ll~~~~~~~~~ga~-~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        162 EVVQLLSRHSQCHFELGAN-AKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHHhCCCcccccCCC-CCccccCCCCccchhh
Confidence            999999998       666 6677778888866543


No 90 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.05  E-value=6.9e-10  Score=108.47  Aligned_cols=123  Identities=24%  Similarity=0.316  Sum_probs=110.4

Q ss_pred             CHHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHH
Q 045393            2 DQELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALH   81 (580)
Q Consensus         2 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh   81 (580)
                      .+++..|+..+|+-.++....+|...-..+++..|.||+|+..|+-|+|+|++++|+.       .+++..|..|+|+||
T Consensus       867 seeil~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~-------elld~~de~get~lh  939 (1004)
T KOG0782|consen  867 SEEILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS-------ELLDMADETGETALH  939 (1004)
T ss_pred             cHHHHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH-------HHHHHHhhhhhHHHH
Confidence            4678999999998888888777766666899999999999999999999999999998       578889999999999


Q ss_pred             HHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHc
Q 045393           82 IAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEK  144 (580)
Q Consensus        82 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  144 (580)
                      .|+..++..++++|++.|+...             .+|..|.||-..|-+.|+.+..-||-.+
T Consensus       940 kaa~~~~r~vc~~lvdagasl~-------------ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  940 KAACQRNRAVCQLLVDAGASLR-------------KTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHhcchHHHHHHHhcchhhe-------------ecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999999999999998743             5899999999999999999999998654


No 91 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.74  E-value=4.1e-08  Score=96.38  Aligned_cols=121  Identities=25%  Similarity=0.292  Sum_probs=105.4

Q ss_pred             hhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhc
Q 045393           38 LHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRM  117 (580)
Q Consensus        38 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~  117 (580)
                      +..|+..++.--++.....|.+         +-.++.+..|.||+|+..|+-++|++++++|+.           +++.+
T Consensus       870 il~av~~~D~~klqE~h~~gg~---------ll~~~~~~~sllh~a~~tg~~eivkyildh~p~-----------elld~  929 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGS---------LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS-----------ELLDM  929 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCc---------eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH-----------HHHHH
Confidence            4566777776666777777776         777888899999999999999999999999874           56888


Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcC
Q 045393          118 TDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKS  179 (580)
Q Consensus       118 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~  179 (580)
                      .|+.|+|+||-|+..++..+.++|++.|+.+- ..|..|.||-..|-..|..+++.||-...
T Consensus       930 ~de~get~lhkaa~~~~r~vc~~lvdagasl~-ktd~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  930 ADETGETALHKAACQRNRAVCQLLVDAGASLR-KTDSKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             HhhhhhHHHHHHHHhcchHHHHHHHhcchhhe-ecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence            99999999999999999999999999999876 57899999999999999999999987654


No 92 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.66  E-value=1.4e-08  Score=104.00  Aligned_cols=95  Identities=25%  Similarity=0.347  Sum_probs=70.2

Q ss_pred             HHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCcccccc-CCCCCHHHHHHHcCCHHHHHHHhcCcchh
Q 045393          241 AQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRN-NSDRSILHVAAKHGNWNIVSFILRSPEME  319 (580)
Q Consensus       241 v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~  319 (580)
                      --++-+.+.+..+..|..|+|+||+|+..+..+++++|+++|.+ +..+| +.|+||||-|+.+|+.|++-+|+++|.. 
T Consensus        34 k~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid-v~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S-  111 (1267)
T KOG0783|consen   34 KGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID-VFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS-  111 (1267)
T ss_pred             HHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCce-eeeccccccchHhhHhhhhchHHHHHHHHhcCCc-
Confidence            33444455566677788888888888888888888888888887 55555 4578888888888888888888887543 


Q ss_pred             hhcccccCCCCcHHHHHHhc
Q 045393          320 NLINLVDRNGNTPLHLAAMG  339 (580)
Q Consensus       320 ~~~n~~d~~G~T~Lh~A~~~  339 (580)
                        +..+|++|.+||.+-.+-
T Consensus       112 --L~i~Dkeglsplq~~~r~  129 (1267)
T KOG0783|consen  112 --LRIKDKEGLSPLQFLSRV  129 (1267)
T ss_pred             --eEEecccCCCHHHHHhhc
Confidence              777888888888877663


No 93 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.64  E-value=1.9e-08  Score=103.13  Aligned_cols=95  Identities=21%  Similarity=0.228  Sum_probs=82.7

Q ss_pred             HHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCcccc
Q 045393          209 KILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEI  288 (580)
Q Consensus       209 ~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~  288 (580)
                      ++-+.+....+..|..|+|+||+++..+..+++++|+++|.++.-+....|.||||.|..+|++|++-.|+++|.. ..+
T Consensus        36 F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S-L~i  114 (1267)
T KOG0783|consen   36 FSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS-LRI  114 (1267)
T ss_pred             HHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc-eEE
Confidence            3444555668889999999999999999999999999999998555455799999999999999999999999988 899


Q ss_pred             ccCCCCCHHHHHHHcC
Q 045393          289 RNNSDRSILHVAAKHG  304 (580)
Q Consensus       289 ~d~~g~t~Lh~A~~~~  304 (580)
                      +|++|..||..-++-.
T Consensus       115 ~Dkeglsplq~~~r~~  130 (1267)
T KOG0783|consen  115 KDKEGLSPLQFLSRVL  130 (1267)
T ss_pred             ecccCCCHHHHHhhcc
Confidence            9999999999888743


No 94 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.56  E-value=7.6e-08  Score=57.29  Aligned_cols=29  Identities=34%  Similarity=0.401  Sum_probs=27.2

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHhcCcccc
Q 045393           75 MDETALHIAARIGDRAIVSEIMKYLPAVN  103 (580)
Q Consensus        75 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~  103 (580)
                      +|+||||+||+.|+.+++++|+++|++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            58999999999999999999999998875


No 95 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.51  E-value=4e-07  Score=88.33  Aligned_cols=94  Identities=23%  Similarity=0.312  Sum_probs=81.1

Q ss_pred             ccCCCCCh------HHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCC
Q 045393          220 RLDWHQRN------PLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSD  293 (580)
Q Consensus       220 ~~d~~g~t------~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g  293 (580)
                      .+|.+|.+      -||..++.|+.+..-.|+..|++.++.-...|.||||.|++.|+.--+++|+-+|+| +...|.+|
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD-~~a~d~~G  200 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD-PGAQDSSG  200 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC-CCCCCCCC
Confidence            34555554      489999999999999999999999777778899999999999999999999999999 89999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHhc
Q 045393          294 RSILHVAAKHGNWNIVSFILR  314 (580)
Q Consensus       294 ~t~Lh~A~~~~~~~iv~~Ll~  314 (580)
                      .||+.+|-..||.++.+-|++
T Consensus       201 mtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  201 MTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             CcHHHHHHhcCchHHHHHHHH
Confidence            999999999999887665554


No 96 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.50  E-value=1.6e-07  Score=55.94  Aligned_cols=29  Identities=34%  Similarity=0.579  Sum_probs=26.0

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q 045393          121 EGNTPLHNAVTNQHKRVIRILVEKDSVPS  149 (580)
Q Consensus       121 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~  149 (580)
                      +|+||||+|++.|+.|++++|+++|++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            48899999999999999999999998764


No 97 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.49  E-value=1.3e-07  Score=58.21  Aligned_cols=32  Identities=44%  Similarity=0.663  Sum_probs=21.8

Q ss_pred             CCCcHHHHHHhcCChhHHHHhhcCccccccccc
Q 045393          328 NGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKN  360 (580)
Q Consensus       328 ~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n  360 (580)
                      +|+||||+|+..|+.+++++|++ .|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLK-HGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHH-TTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHH-CcCCCCCCC
Confidence            46677777777777777777775 367776665


No 98 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.49  E-value=1.5e-07  Score=90.77  Aligned_cols=92  Identities=33%  Similarity=0.394  Sum_probs=63.6

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHH
Q 045393          256 DCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHL  335 (580)
Q Consensus       256 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~  335 (580)
                      +.++..++++|++.|.+..++.+.-.+.| ++.+|-+.+|+||.|+..|+.+++++|++..  +.+.+.+|..|+|||.-
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~--kv~~~~kDRw~rtPlDd  579 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNAC--KVDPDPKDRWGRTPLDD  579 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHH--cCCCChhhccCCCcchH
Confidence            33455667777777777777777766776 6777777777777777777777777777653  33466677777777777


Q ss_pred             HHhcCChhHHHHhhc
Q 045393          336 AAMGLHSDVVFTLSR  350 (580)
Q Consensus       336 A~~~~~~~~~~~Ll~  350 (580)
                      |...+|.+++++|.+
T Consensus       580 A~~F~h~~v~k~L~~  594 (622)
T KOG0506|consen  580 AKHFKHKEVVKLLEE  594 (622)
T ss_pred             hHhcCcHHHHHHHHH
Confidence            777777777776654


No 99 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.46  E-value=1.9e-07  Score=90.17  Aligned_cols=89  Identities=17%  Similarity=0.184  Sum_probs=81.8

Q ss_pred             HHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIA   83 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~A   83 (580)
                      .++.|++.||+..++.+.-.+......|.+.+|+||+|+..|+.+++++|++....        .++.+|..|+|||.-|
T Consensus       509 ~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv--------~~~~kDRw~rtPlDdA  580 (622)
T KOG0506|consen  509 NVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKV--------DPDPKDRWGRTPLDDA  580 (622)
T ss_pred             hhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcC--------CCChhhccCCCcchHh
Confidence            46889999999999999988888888999999999999999999999999998766        6889999999999999


Q ss_pred             HHhCCHHHHHHHHhcCc
Q 045393           84 ARIGDRAIVSEIMKYLP  100 (580)
Q Consensus        84 a~~g~~~~v~~Ll~~~~  100 (580)
                      -..+|.+++++|-+.-.
T Consensus       581 ~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  581 KHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             HhcCcHHHHHHHHHHhc
Confidence            99999999999987643


No 100
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.43  E-value=6.3e-07  Score=86.99  Aligned_cols=93  Identities=26%  Similarity=0.247  Sum_probs=79.6

Q ss_pred             ccCCCCCc------HHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccC
Q 045393          254 KRDCNGET------PLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDR  327 (580)
Q Consensus       254 ~~~~~g~t------pL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~  327 (580)
                      .+|.+|.+      -||..++.|+.+..-.|+..|++.....-..|.||||.|++.|+..-+++|.-.   |+++++.|.
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vY---GAD~~a~d~  198 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVY---GADPGAQDS  198 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhc---cCCCCCCCC
Confidence            34555554      489999999999999999999995555557899999999999999999999988   556999999


Q ss_pred             CCCcHHHHHHhcCChhHHHHhh
Q 045393          328 NGNTPLHLAAMGLHSDVVFTLS  349 (580)
Q Consensus       328 ~G~T~Lh~A~~~~~~~~~~~Ll  349 (580)
                      +|.||+.+|-..||.++.+.|+
T Consensus       199 ~GmtP~~~AR~~gH~~laeRl~  220 (669)
T KOG0818|consen  199 SGMTPVDYARQGGHHELAERLV  220 (669)
T ss_pred             CCCcHHHHHHhcCchHHHHHHH
Confidence            9999999999999988766554


No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.32  E-value=1.5e-06  Score=85.58  Aligned_cols=91  Identities=22%  Similarity=0.328  Sum_probs=77.6

Q ss_pred             chhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhh
Q 045393           36 AVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLF  115 (580)
Q Consensus        36 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l  115 (580)
                      -|||+++...+.+-....+.....       ..++.+|..|+||||+|+..|+.+.++.|+.+|+++.            
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~-------~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~------------   82 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVS-------LVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVS------------   82 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhh-------ceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc------------
Confidence            459999999998877775544322       2478899999999999999999999999999999865            


Q ss_pred             hccCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Q 045393          116 RMTDIEGNTPLHNAVTNQHKRVIRILVEKDS  146 (580)
Q Consensus       116 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~  146 (580)
                       .+|++|++|||.|+..|+.+++..++.+..
T Consensus        83 -~kN~~gWs~L~EAv~~g~~q~i~~vlr~~~  112 (560)
T KOG0522|consen   83 -IKNNEGWSPLHEAVSTGNEQIITEVLRHLK  112 (560)
T ss_pred             -ccccccccHHHHHHHcCCHHHHHHHHHHhH
Confidence             689999999999999999999988887654


No 102
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.32  E-value=8.8e-07  Score=54.41  Aligned_cols=26  Identities=46%  Similarity=0.783  Sum_probs=11.4

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHhCCC
Q 045393          259 GETPLHLAAENGKLKVLKLLINKYPD  284 (580)
Q Consensus       259 g~tpL~~A~~~g~~~~v~~Ll~~~~~  284 (580)
                      |.||||+|+..|+.+++++|+++|++
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~   27 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGAD   27 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCC
Confidence            34444444444444444444444444


No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.26  E-value=2.9e-06  Score=84.13  Aligned_cols=92  Identities=18%  Similarity=0.169  Sum_probs=82.0

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhc----CcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCc
Q 045393            3 QELLEVLRHGDEYKIKQLALRQ----DIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDET   78 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~----~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~t   78 (580)
                      ..|..|+...|+..+..||.+|    .+....+.+|.|+||+||+.|+..+.+.|+=.|.+         +..+|..|+|
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d---------v~~rda~g~t  696 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD---------VMARDAHGRT  696 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc---------ceecccCCch
Confidence            4689999999999999999886    23344556789999999999999999999999988         8899999999


Q ss_pred             HHHHHHHhCCHHHHHHHHhcCcccc
Q 045393           79 ALHIAARIGDRAIVSEIMKYLPAVN  103 (580)
Q Consensus        79 pLh~Aa~~g~~~~v~~Ll~~~~~~~  103 (580)
                      +|.+|-+.|.-+++..|+++|....
T Consensus       697 ~l~yar~a~sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  697 ALFYARQAGSQECIDVLLQYGCPDE  721 (749)
T ss_pred             hhhhHhhcccHHHHHHHHHcCCCcc
Confidence            9999999999999999999997643


No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.26  E-value=2.1e-06  Score=84.68  Aligned_cols=89  Identities=25%  Similarity=0.325  Sum_probs=79.0

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhc--CcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHH
Q 045393            3 QELLEVLRHGDEYKIKQLALRQ--DIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETAL   80 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~--~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpL   80 (580)
                      .++|.++...+.+.+...+...  ......|..|+||||.|+..|+.+.++.|+..|++         +..+|..|++||
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad---------v~~kN~~gWs~L   92 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD---------VSIKNNEGWSPL   92 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC---------ccccccccccHH
Confidence            3588999999999998876654  45566889999999999999999999999999998         889999999999


Q ss_pred             HHHHHhCCHHHHHHHHhcCc
Q 045393           81 HIAARIGDRAIVSEIMKYLP  100 (580)
Q Consensus        81 h~Aa~~g~~~~v~~Ll~~~~  100 (580)
                      |-|+..|+.+++..++.+..
T Consensus        93 ~EAv~~g~~q~i~~vlr~~~  112 (560)
T KOG0522|consen   93 HEAVSTGNEQIITEVLRHLK  112 (560)
T ss_pred             HHHHHcCCHHHHHHHHHHhH
Confidence            99999999999999988653


No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.25  E-value=2.5e-06  Score=84.53  Aligned_cols=86  Identities=28%  Similarity=0.342  Sum_probs=44.4

Q ss_pred             HHHHHcCChHHHHHHHHhchhc---ccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCH
Q 045393          230 HYAAASGNVKMAQRLLEESKRL---AYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNW  306 (580)
Q Consensus       230 ~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~  306 (580)
                      ..|....++..+-.||.+|...   ....+.+|.|+||+||+.|++.+.++|+-+|.| +..+|.+|+|+|.||-+.|..
T Consensus       629 l~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~yar~a~sq  707 (749)
T KOG0705|consen  629 LRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFYARQAGSQ  707 (749)
T ss_pred             HHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhhHhhcccH
Confidence            3344444455555555554221   112233445555555555555555555555555 555555555555555555555


Q ss_pred             HHHHHHhcCc
Q 045393          307 NIVSFILRSP  316 (580)
Q Consensus       307 ~iv~~Ll~~~  316 (580)
                      +++..|+.+|
T Consensus       708 ec~d~llq~g  717 (749)
T KOG0705|consen  708 ECIDVLLQYG  717 (749)
T ss_pred             HHHHHHHHcC
Confidence            5555555553


No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.17  E-value=8.2e-06  Score=85.38  Aligned_cols=127  Identities=16%  Similarity=0.133  Sum_probs=100.0

Q ss_pred             HHHHHHHcCCHHHHHHHhhhcC----cccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQD----IFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETA   79 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~~----~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tp   79 (580)
                      ....|++.||...++..++...    ..+..|+-|.++|+.|+.+.+.|++++|+++...         .       ..+
T Consensus        28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~---------~-------gdA   91 (822)
T KOG3609|consen   28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE---------E-------GDA   91 (822)
T ss_pred             HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccc---------c-------chH
Confidence            5678999999999999998753    3566889999999999999999999999997654         1       468


Q ss_pred             HHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q 045393           80 LHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPS  149 (580)
Q Consensus        80 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~  149 (580)
                      |.+|+..|..+.|+.++.+-......+...+   .-...-..+.|||..||..++.||+++|+++|+...
T Consensus        92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d---~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen   92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGD---ANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccchhccccc---cCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence            8899999999999999987654322111000   001123457899999999999999999999998765


No 107
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.13  E-value=2.5e-05  Score=81.82  Aligned_cols=125  Identities=14%  Similarity=0.101  Sum_probs=96.3

Q ss_pred             CCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhh
Q 045393           34 GNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLES  113 (580)
Q Consensus        34 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~  113 (580)
                      +..-...|+..|+.-.|+..++....     ..-.++..|.-|+++|+.|..+.+.+++++|+++...            
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~-----~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~------------   87 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAV-----SKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE------------   87 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccc-----cccchhccChHhhhceecccccccHHHHHHHhcCccc------------
Confidence            44557789999999999999987654     2234778899999999999999999999999986432            


Q ss_pred             hhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC---------cccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCc
Q 045393          114 LFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPS---------SYINKAYQTPLSIAIDARLNDIACFIIDKSPESL  183 (580)
Q Consensus       114 ~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~---------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~  183 (580)
                             . ..+|.+|+..|..+.|+.++.+.....         ...-..+.||+.+|+..++.|+++.|++++...+
T Consensus        88 -------~-gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen   88 -------E-GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             -------c-chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence                   1 358899999999999999998754321         1112345689999999999999999998886443


No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.90  E-value=2.4e-05  Score=73.83  Aligned_cols=57  Identities=19%  Similarity=0.201  Sum_probs=54.3

Q ss_pred             HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCch
Q 045393            3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDF   59 (580)
Q Consensus         3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~   59 (580)
                      .+|..||+.||.+.+++|++.|...+.+|.-.++||.+|+..||.++||.|+++|+-
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAi   94 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI   94 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence            368999999999999999999988899999999999999999999999999999986


No 109
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.82  E-value=5e-05  Score=64.96  Aligned_cols=69  Identities=23%  Similarity=0.160  Sum_probs=58.2

Q ss_pred             hcccccCCCCcHHHHHHHhCCHHHHHHHHhcC-cccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Q 045393           68 LLRQKNLMDETALHIAARIGDRAIVSEIMKYL-PAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDS  146 (580)
Q Consensus        68 ~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~  146 (580)
                      .++.+|..|+|||++|+..|+.+.+.+|+.+| +.+             ...|..|.+++.+|-+.|+.++++.|.+...
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~v-------------gv~d~ssldaaqlaek~g~~~fvh~lfe~~~   70 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFV-------------GVTDESSLDAAQLAEKGGAQAFVHSLFENDR   70 (223)
T ss_pred             CccchhhhcchHHHHHhhhcchhHHHHHhccCcccc-------------cccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence            37889999999999999999999999999998 443             3578899999999999999999999988754


Q ss_pred             CCC
Q 045393          147 VPS  149 (580)
Q Consensus       147 ~~~  149 (580)
                      +-.
T Consensus        71 ets   73 (223)
T KOG2384|consen   71 ETS   73 (223)
T ss_pred             cCC
Confidence            433


No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.79  E-value=3.4e-05  Score=72.86  Aligned_cols=58  Identities=16%  Similarity=0.160  Sum_probs=54.6

Q ss_pred             CchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 045393           35 NAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPA  101 (580)
Q Consensus        35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~  101 (580)
                      .--|.+||+.|+.+.|++|++.|.+         +|++|....+||.+|+..||.++|+.|+++|+-
T Consensus        37 f~elceacR~GD~d~v~~LVetgvn---------VN~vD~fD~spL~lAsLcGHe~vvklLLenGAi   94 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVN---------VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI   94 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCC---------cchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence            4458999999999999999999998         999999999999999999999999999999975


No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.78  E-value=1.8e-05  Score=84.66  Aligned_cols=128  Identities=20%  Similarity=0.151  Sum_probs=86.3

Q ss_pred             cccCCCCChHHHHHHHcCChHHHHHHHHh-chhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHH
Q 045393          219 DRLDWHQRNPLHYAAASGNVKMAQRLLEE-SKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSIL  297 (580)
Q Consensus       219 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L  297 (580)
                      ....-.|++.+|+++..++.-.++.+++- +... ...|.+|...+|+ |..++.+...+++......++.+|..|+|||
T Consensus       568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~-~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL  645 (975)
T KOG0520|consen  568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGD-LELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPL  645 (975)
T ss_pred             ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCc-hhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCccc
Confidence            33455677888888888888888877775 3222 4456666667777 4455566666665554444788888888888


Q ss_pred             HHHHHcCCHHHHHHHhcCcchhh---hcccccCCCCcHHHHHHhcCChhHHHHh
Q 045393          298 HVAAKHGNWNIVSFILRSPEMEN---LINLVDRNGNTPLHLAAMGLHSDVVFTL  348 (580)
Q Consensus       298 h~A~~~~~~~iv~~Ll~~~~~~~---~~n~~d~~G~T~Lh~A~~~~~~~~~~~L  348 (580)
                      |+|+.+|+..++..|++.+....   +.+..+-.|.|+-.+|..+|+..+.-+|
T Consensus       646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~l  699 (975)
T KOG0520|consen  646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYL  699 (975)
T ss_pred             chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHH
Confidence            88888888888888887654432   2333444678888888888776665544


No 112
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.75  E-value=2.9e-05  Score=83.75  Aligned_cols=79  Identities=28%  Similarity=0.382  Sum_probs=63.8

Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHH
Q 045393          291 NSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALE  370 (580)
Q Consensus       291 ~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~  370 (580)
                      ..|.|+||.|+.++..-+.++|+++++   ++|..|..|+||||.+...|+...+..|++ +|+++++.+.  +|++|++
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga---~vn~~d~~g~~plh~~~~~g~~~~~~~ll~-~~a~~~a~~~--~~~~~l~  727 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGA---DVNALDSKGRTPLHHATASGHTSIACLLLK-RGADPNAFDP--DGKLPLD  727 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCC---cchhhhccCCCcchhhhhhcccchhhhhcc-ccccccccCc--cCcchhh
Confidence            457788888888888888888888844   488888888888888888888888877775 5888888888  8888888


Q ss_pred             HHHHH
Q 045393          371 IAEIT  375 (580)
Q Consensus       371 ~a~~~  375 (580)
                      +|...
T Consensus       728 ~a~~~  732 (785)
T KOG0521|consen  728 IAMEA  732 (785)
T ss_pred             HHhhh
Confidence            88764


No 113
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.57  E-value=0.00016  Score=61.87  Aligned_cols=68  Identities=19%  Similarity=0.154  Sum_probs=52.8

Q ss_pred             cccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCC
Q 045393          217 LIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPD  284 (580)
Q Consensus       217 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~  284 (580)
                      ++|.+|..|+|+++.|+..|+.+.+.+|+.+|.......|..|.+++.+|-+.|..++++.|.+...+
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            36777888888888888888888888888888444467778888888888888888888888777544


No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.57  E-value=6.1e-05  Score=81.35  Aligned_cols=88  Identities=28%  Similarity=0.470  Sum_probs=78.8

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHH
Q 045393          257 CNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLA  336 (580)
Q Consensus       257 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A  336 (580)
                      ..|.|+||.|+..|..-++++|++.|++ ++.+|..|+||+|.+...|+...+..|+++   +++.++.|.+|.+||++|
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~---~a~~~a~~~~~~~~l~~a  729 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKR---GADPNAFDPDGKLPLDIA  729 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhccc---cccccccCccCcchhhHH
Confidence            4688999999999999999999999999 999999999999999999999999999998   455899999999999999


Q ss_pred             HhcCChhHHHHh
Q 045393          337 AMGLHSDVVFTL  348 (580)
Q Consensus       337 ~~~~~~~~~~~L  348 (580)
                      ....+.+++-.+
T Consensus       730 ~~~~~~d~~~l~  741 (785)
T KOG0521|consen  730 MEAANADIVLLL  741 (785)
T ss_pred             hhhccccHHHHH
Confidence            887666665443


No 115
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.52  E-value=0.00017  Score=77.47  Aligned_cols=129  Identities=20%  Similarity=0.185  Sum_probs=95.5

Q ss_pred             CCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHH
Q 045393          186 TRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHL  265 (580)
Q Consensus       186 ~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~  265 (580)
                      .....|.+.+|.++..+..-.++.+++.........|.+|.-.+|+++ .+..+..-++........+.+|..|+||||+
T Consensus       569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~w  647 (975)
T KOG0520|consen  569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTPLHW  647 (975)
T ss_pred             cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcccch
Confidence            333378899999999988888888888744446667777778888844 4455555555544333347789999999999


Q ss_pred             HHHcCcHHHHHHHHHhCCCccc-----cccCCCCCHHHHHHHcCCHHHHHHHhcC
Q 045393          266 AAENGKLKVLKLLINKYPDAIE-----IRNNSDRSILHVAAKHGNWNIVSFILRS  315 (580)
Q Consensus       266 A~~~g~~~~v~~Ll~~~~~~~~-----~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  315 (580)
                      |+.+|+..++..|++.+++..-     ..+..|.|+-..|-.+|+..+..+|-+.
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            9999999999999987766322     2345688899999999998888888765


No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.19  E-value=0.0075  Score=34.75  Aligned_cols=28  Identities=25%  Similarity=0.342  Sum_probs=25.1

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 045393           75 MDETALHIAARIGDRAIVSEIMKYLPAV  102 (580)
Q Consensus        75 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~  102 (580)
                      .|.||+|+|+..++.++++.|++.+.++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            3789999999999999999999988754


No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.19  E-value=0.0044  Score=61.29  Aligned_cols=66  Identities=15%  Similarity=0.016  Sum_probs=51.3

Q ss_pred             HHHHHHHhcCcchhh---hcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHH
Q 045393          306 WNIVSFILRSPEMEN---LINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       306 ~~iv~~Ll~~~~~~~---~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      .+.+++|.+++..++   .....|..--|+||+|+..|..+++.+||++ |+|+.++|.  .|+||.+++..
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Lee-g~Dp~~kd~--~Grtpy~ls~n  472 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEE-GCDPSTKDG--AGRTPYSLSAN  472 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHh-cCCchhccc--CCCCccccccc
Confidence            567777777744331   2333455567999999999999999999987 699999999  99999998764


No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.15  E-value=0.0095  Score=34.28  Aligned_cols=28  Identities=36%  Similarity=0.605  Sum_probs=22.4

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHcCCCC
Q 045393          121 EGNTPLHNAVTNQHKRVIRILVEKDSVP  148 (580)
Q Consensus       121 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~  148 (580)
                      .|.||+|+|+..++.++++.|++.+.++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            3678888888888888888888877644


No 119
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.89  E-value=0.14  Score=44.35  Aligned_cols=46  Identities=24%  Similarity=0.335  Sum_probs=35.1

Q ss_pred             HHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhc
Q 045393          262 PLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILR  314 (580)
Q Consensus       262 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~  314 (580)
                      -|..|+..|-...+...+++|.+ ++.      ++|-.|+++++..++.++++
T Consensus       146 hl~~a~~kgll~F~letlkygg~-~~~------~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYGGN-VDI------IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCc-ccH------HHHHHHHHhhHHHHHHHhhc
Confidence            36678888888888888888777 332      77888888888888887764


No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.25  E-value=0.026  Score=56.03  Aligned_cols=26  Identities=31%  Similarity=0.194  Sum_probs=13.1

Q ss_pred             CcHHHHHHHhCCHHHHHHHHhcCccc
Q 045393           77 ETALHIAARIGDRAIVSEIMKYLPAV  102 (580)
Q Consensus        77 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~  102 (580)
                      -|+||+|+.+|..++|.+||+.|.|+
T Consensus       431 sT~LH~aa~qg~~k~v~~~Leeg~Dp  456 (591)
T KOG2505|consen  431 STFLHYAAAQGARKCVKYFLEEGCDP  456 (591)
T ss_pred             chHHHHHHhcchHHHHHHHHHhcCCc
Confidence            34555555555555555555555443


No 121
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.13  E-value=0.094  Score=46.77  Aligned_cols=117  Identities=13%  Similarity=0.198  Sum_probs=81.8

Q ss_pred             HHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCC----CCcH
Q 045393            4 ELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLM----DETA   79 (580)
Q Consensus         4 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~----g~tp   79 (580)
                      .|-.|+..-|.+.+..+....       .+-.+++-+|..++..+++.+|+.+..-          ...|.-    +.--
T Consensus       156 sledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~~K~dva~~lls~f~f----------t~~dv~~~~~~~yd  218 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGNAKEDVALYLLSKFNF----------TKQDVASMEKELYD  218 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcccHHHHHHHHHhhcce----------ecchhhhcCcchhh
Confidence            355677777777777776532       2245789999999999999999987753          122211    2223


Q ss_pred             HHHHHH--hCCHHHHHHHHhcC-cccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Q 045393           80 LHIAAR--IGDRAIVSEIMKYL-PAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSV  147 (580)
Q Consensus        80 Lh~Aa~--~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~  147 (580)
                      +-++..  ..+..++++++++| .++|..-          .+-+.|.|-|.-|+++++.|++..|+++|+.
T Consensus       219 ieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F----------~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  219 IEYLLSEHSASYKVLEYFINRGLVDVNKKF----------QKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             HHHHHhhcCCcHHHHHHHHhccccccchhh----------hccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            334433  44678899999988 3443221          2456899999999999999999999999983


No 122
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.95  E-value=0.17  Score=45.17  Aligned_cols=46  Identities=13%  Similarity=0.236  Sum_probs=24.9

Q ss_pred             hHHHHHHHHhch-hc--ccccCCCCCcHHHHHHHcCcHHHHHHHHHhCC
Q 045393          238 VKMAQRLLEESK-RL--AYKRDCNGETPLHLAAENGKLKVLKLLINKYP  283 (580)
Q Consensus       238 ~~~v~~Ll~~~~-~~--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~  283 (580)
                      ..++++.+++|- ++  ...+-+.|.|-|.-|.++++.+++..|+++|+
T Consensus       230 ~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  230 YKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             HHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            455566666552 11  11233456666666666666666666666655


No 123
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.56  E-value=0.39  Score=41.74  Aligned_cols=139  Identities=15%  Similarity=0.099  Sum_probs=95.2

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcC
Q 045393          123 NTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQ  202 (580)
Q Consensus       123 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~  202 (580)
                      ...+..|++.+-..+++..-+.....    -...++....||+..+.|+++|+-+.-...       +-.+.+..|....
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~i~-------~~~~iFdIA~~~k  115 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLHIY-------NPEDIFDIAFAKK  115 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccCCC-------Cchhhhhhhhhcc
Confidence            34577899999999988877654321    124467788999999999999995544211       3445677888888


Q ss_pred             CHHHHH----HHHhhCCccccccCC--CCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHH
Q 045393          203 NYDIMV----KILGTNKELIDRLDW--HQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLK  276 (580)
Q Consensus       203 ~~~~~~----~Ll~~~~~~~~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~  276 (580)
                      +.++..    .++++... ....|.  --..-|..|+..|-...+...+++|.+..       .+.|..|+.+++..++.
T Consensus       116 DlsLyslGY~l~~~~~~~-~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~-------~~vls~Av~ynhRkIL~  187 (192)
T PF03158_consen  116 DLSLYSLGYKLLFNRMMS-EHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD-------IIVLSQAVKYNHRKILD  187 (192)
T ss_pred             chhHHHHHHHHHHhhccc-ccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc-------HHHHHHHHHhhHHHHHH
Confidence            876522    22222111 000010  00123788999999999999999987662       28999999999999999


Q ss_pred             HHHH
Q 045393          277 LLIN  280 (580)
Q Consensus       277 ~Ll~  280 (580)
                      +++.
T Consensus       188 yfi~  191 (192)
T PF03158_consen  188 YFIR  191 (192)
T ss_pred             Hhhc
Confidence            8874


No 124
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=90.25  E-value=0.81  Score=34.09  Aligned_cols=48  Identities=27%  Similarity=0.423  Sum_probs=35.4

Q ss_pred             cHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcC
Q 045393          124 TPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKS  179 (580)
Q Consensus       124 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~  179 (580)
                      ..+..|+..|+.|+++.+++.+. +.       ...+..|+...+.+++++|++..
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~-~~-------~~~l~~AI~~H~n~i~~~l~~~y   55 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNK-PD-------NDCLEYAIKSHNNEIADWLIENY   55 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhc-cH-------HHHHHHHHHHhhHHHHHHHHHhc
Confidence            45778888888888888886552 11       35678888888888888888764


No 125
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=89.88  E-value=12  Score=36.92  Aligned_cols=130  Identities=10%  Similarity=0.055  Sum_probs=69.8

Q ss_pred             cCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcc
Q 045393           30 SSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAP  109 (580)
Q Consensus        30 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~  109 (580)
                      .|..|.-.|..+...++.+....+++.-.+      .-..-..|..|.-.+......+..+-...+++.-..        
T Consensus        17 ~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~------~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~--------   82 (322)
T cd07920          17 KDQHGSRFLQQKLEEATPEEKELIFDEILP------HVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILG--------   82 (322)
T ss_pred             CCchhhHHHHHHhccCCHHHHHHHHHHHHH------hHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHH--------
Confidence            566778888888888888888887775221      111234566777777777777766655555543210        


Q ss_pred             hhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHc--CCCCCcccccCCCCHHHHHHHcCcHHHHHHH
Q 045393          110 VLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEK--DSVPSSYINKAYQTPLSIAIDARLNDIACFI  175 (580)
Q Consensus       110 ~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L  175 (580)
                        ...--..+..|.-.+..+...+..+-...+++.  +....-..|..|...+..+......+..+.+
T Consensus        83 --~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i  148 (322)
T cd07920          83 --HVVRLSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFI  148 (322)
T ss_pred             --HHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHH
Confidence              000113566676666666666554433333332  1111112344555555555554444443333


No 126
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=89.10  E-value=0.71  Score=34.38  Aligned_cols=48  Identities=19%  Similarity=0.227  Sum_probs=40.9

Q ss_pred             CchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhc
Q 045393           35 NAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKY   98 (580)
Q Consensus        35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~   98 (580)
                      ...+..|+..|+.|+++.+++.+..                ....+..|+...+.+++++|+++
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~~~----------------~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKNKP----------------DNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHhcc----------------HHHHHHHHHHHhhHHHHHHHHHh
Confidence            4568999999999999999976533                15679999999999999999986


No 127
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=88.75  E-value=15  Score=36.12  Aligned_cols=253  Identities=8%  Similarity=0.003  Sum_probs=133.8

Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHHcC--CCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCC-CCcCCCCCCCCccH
Q 045393          118 TDIEGNTPLHNAVTNQHKRVIRILVEKD--SVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSP-ESLNTTRLPDELTL  194 (580)
Q Consensus       118 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~t~  194 (580)
                      .|..|.-.+.-+.+.+..+....+++.-  .-..-..|..|...+......+..+-...+++.-. ........+.|...
T Consensus        17 ~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~v   96 (322)
T cd07920          17 KDQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRV   96 (322)
T ss_pred             CCchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHH
Confidence            3445555666666665555555444430  00111235556666666666665554444433321 11111112266667


Q ss_pred             HHHHHHcCCHHHHHHHHhhC--CccccccCCCCChHHHHHHHcCChHHHHHHHHhch--hcccccCCCCCcHHHHHHHcC
Q 045393          195 IHFVVMRQNYDIMVKILGTN--KELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESK--RLAYKRDCNGETPLHLAAENG  270 (580)
Q Consensus       195 L~~A~~~~~~~~~~~Ll~~~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~~g~tpL~~A~~~g  270 (580)
                      +..+...+..+....+++.-  ....-..|..|...+..+...+..+..+.+++.-.  -.....+..|...+.......
T Consensus        97 lqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~  176 (322)
T cd07920          97 IQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHC  176 (322)
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHHhC
Confidence            77777666654444443321  11122346778888888777776666555554321  111234667877777777665


Q ss_pred             cHHH----HHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCCh----
Q 045393          271 KLKV----LKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHS----  342 (580)
Q Consensus       271 ~~~~----v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~----  342 (580)
                      ..+.    ++.+...-..  -..|..|+..+..+.+.+..+..+.+++.-.....--..+..|...+..+...+..    
T Consensus       177 ~~~~~~~l~~~l~~~~~~--L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~~~~~~  254 (322)
T cd07920         177 SEEQREPLLEEILEHALE--LVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHASKEERE  254 (322)
T ss_pred             CHHHHHHHHHHHHHHHHH--HhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCCHHHHH
Confidence            5443    3444333222  24578899999999998877655555544211111235778898888888887753    


Q ss_pred             hHHHHhhcCc----ccccccccccCCCCCHHHHHHH
Q 045393          343 DVVFTLSRHK----SVNIRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       343 ~~~~~Ll~~~----~~d~~~~n~~~~g~t~l~~a~~  374 (580)
                      .+++.++...    ...--+.|.  .|.-.+.-+..
T Consensus       255 ~ii~~l~~~~~~~~~l~~l~~d~--~Gn~Viq~~l~  288 (322)
T cd07920         255 LIIDEILASGNETSALDTLMKDQ--YGNYVIQTALD  288 (322)
T ss_pred             HHHHHHhcCCCchhHHHHHhCCC--cccHHHHHHHH
Confidence            3444554321    111223444  56555555544


No 128
>PF08006 DUF1700:  Protein of unknown function (DUF1700);  InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=64.49  E-value=1e+02  Score=27.31  Aligned_cols=9  Identities=11%  Similarity=0.453  Sum_probs=4.0

Q ss_pred             hHHHHHHhh
Q 045393          569 FALVVRFVR  577 (580)
Q Consensus       569 ~~~~~~~~~  577 (580)
                      ++...+++|
T Consensus       172 ~kw~~~~vk  180 (181)
T PF08006_consen  172 LKWNIKMVK  180 (181)
T ss_pred             HHHHHHHHc
Confidence            444444444


No 129
>KOG4349 consensus Uncharacterized conserved protein [Function unknown]
Probab=57.61  E-value=64  Score=25.99  Aligned_cols=20  Identities=15%  Similarity=0.202  Sum_probs=7.9

Q ss_pred             hHHHHHHhHHHHHHHHHHHH
Q 045393          466 FQAFVITDTIAMTSAMAAAA  485 (580)
Q Consensus       466 ~~~f~~~~~~a~~~s~~~~~  485 (580)
                      |.+|.-+-.-+++.++.+.+
T Consensus        47 y~vFLWal~Ss~fih~~A~i   66 (143)
T KOG4349|consen   47 YSVFLWALLSSMFIHLGATI   66 (143)
T ss_pred             HHHHHHHHHHHHHHHhhHHH
Confidence            34444333333344433333


No 130
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=54.14  E-value=1.7e+02  Score=30.80  Aligned_cols=34  Identities=21%  Similarity=0.245  Sum_probs=17.8

Q ss_pred             hhhhHHhhHhHHHHHHHHHHHHHHHHHHhhhcCc
Q 045393          535 ITIAVCVIGCLLPFIFYVSAPFFMIVFDQTEVNP  568 (580)
Q Consensus       535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (580)
                      |....++.+.++.+.+|...+-.+-.|...|..+
T Consensus       365 ~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~  398 (485)
T KOG0569|consen  365 WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFP  398 (485)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCC
Confidence            3333445555566666666544444455555443


No 131
>PF11023 DUF2614:  Protein of unknown function (DUF2614);  InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=52.71  E-value=56  Score=26.07  Aligned_cols=34  Identities=18%  Similarity=0.468  Sum_probs=20.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhHHhhH
Q 045393          504 PLAIGFTWIALVSMTLAFVTGLYAVLSNSLAITIAVCVIG  543 (580)
Q Consensus       504 ~~~~~~~~~~~~~~~~af~~~~~~~~~~~~~~~~~~~~~~  543 (580)
                      .||+.++|+++.-|.+.    +  +..++.+++...++++
T Consensus        13 ~~al~lif~g~~vmy~g----i--~f~~~~~im~ifmllG   46 (114)
T PF11023_consen   13 TFALSLIFIGMIVMYIG----I--FFKASPIIMVIFMLLG   46 (114)
T ss_pred             HHHHHHHHHHHHHHhhh----h--hhcccHHHHHHHHHHH
Confidence            47777777777777543    2  2345556655555555


No 132
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=48.56  E-value=31  Score=35.73  Aligned_cols=130  Identities=10%  Similarity=0.073  Sum_probs=57.6

Q ss_pred             hhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhc
Q 045393           38 LHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRM  117 (580)
Q Consensus        38 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~  117 (580)
                      +..|+.+++.+-+..+++...-        +.......|.....+.-..|..++.-.+.+                    
T Consensus       268 fk~av~~~d~~~v~~~i~~~~l--------l~~i~~~~~~~i~~fL~~~G~~e~AL~~~~--------------------  319 (443)
T PF04053_consen  268 FKTAVLRGDFEEVLRMIAASNL--------LPNIPKDQGQSIARFLEKKGYPELALQFVT--------------------  319 (443)
T ss_dssp             HHHHHHTT-HHH-----HHHHT--------GGG--HHHHHHHHHHHHHTT-HHHHHHHSS--------------------
T ss_pred             HHHHHHcCChhhhhhhhhhhhh--------cccCChhHHHHHHHHHHHCCCHHHHHhhcC--------------------
Confidence            3456677777766555542221        112223334455555555555555444432                    


Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHH
Q 045393          118 TDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHF  197 (580)
Q Consensus       118 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~  197 (580)
                       |  -++=+.+|.+.|+.+.+.-+.+...+..     .+...-..|...|+.++++.-.++..         +-...+..
T Consensus       320 -D--~~~rFeLAl~lg~L~~A~~~a~~~~~~~-----~W~~Lg~~AL~~g~~~lAe~c~~k~~---------d~~~L~lL  382 (443)
T PF04053_consen  320 -D--PDHRFELALQLGNLDIALEIAKELDDPE-----KWKQLGDEALRQGNIELAEECYQKAK---------DFSGLLLL  382 (443)
T ss_dssp             ----HHHHHHHHHHCT-HHHHHHHCCCCSTHH-----HHHHHHHHHHHTTBHHHHHHHHHHCT----------HHHHHHH
T ss_pred             -C--hHHHhHHHHhcCCHHHHHHHHHhcCcHH-----HHHHHHHHHHHcCCHHHHHHHHHhhc---------CccccHHH
Confidence             1  1344666777777776665544332111     11122234556666666666666552         22233445


Q ss_pred             HHHcCCHHHHHHHHh
Q 045393          198 VVMRQNYDIMVKILG  212 (580)
Q Consensus       198 A~~~~~~~~~~~Ll~  212 (580)
                      ....|+.+-++.|.+
T Consensus       383 y~~~g~~~~L~kl~~  397 (443)
T PF04053_consen  383 YSSTGDREKLSKLAK  397 (443)
T ss_dssp             HHHCT-HHHHHHHHH
T ss_pred             HHHhCCHHHHHHHHH
Confidence            555566655555543


No 133
>PRK02935 hypothetical protein; Provisional
Probab=48.32  E-value=1e+02  Score=24.28  Aligned_cols=17  Identities=24%  Similarity=0.565  Sum_probs=11.5

Q ss_pred             hhHHHHHHHHHHHHHHH
Q 045393          504 PLAIGFTWIALVSMTLA  520 (580)
Q Consensus       504 ~~~~~~~~~~~~~~~~a  520 (580)
                      .||+.++|+++.-|.+.
T Consensus        14 t~aL~lvfiG~~vMy~G   30 (110)
T PRK02935         14 TFALSLVFIGFIVMYLG   30 (110)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            47777777777776444


No 134
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=45.10  E-value=13  Score=32.72  Aligned_cols=50  Identities=20%  Similarity=0.328  Sum_probs=32.8

Q ss_pred             cCCCCCHHHHHHHcCCHHHHH-HHhcCc-chhhhcccccCCCCcHHHHHHhc
Q 045393          290 NNSDRSILHVAAKHGNWNIVS-FILRSP-EMENLINLVDRNGNTPLHLAAMG  339 (580)
Q Consensus       290 d~~g~t~Lh~A~~~~~~~iv~-~Ll~~~-~~~~~~n~~d~~G~T~Lh~A~~~  339 (580)
                      |.+-.+|||-|+.-++.+++- |+++.. ..+..+|..|.+|..+|.+|...
T Consensus       219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            445567888888888877654 444442 22345777788888888877654


No 135
>PF10966 DUF2768:  Protein of unknown function (DUF2768);  InterPro: IPR020076 This entry contains proteins with no known function.
Probab=43.65  E-value=17  Score=25.14  Aligned_cols=22  Identities=23%  Similarity=0.560  Sum_probs=15.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Q 045393          510 TWIALVSMTLAFVTGLYAVLSN  531 (580)
Q Consensus       510 ~~~~~~~~~~af~~~~~~~~~~  531 (580)
                      ||+|+.+|..=|.+.....+++
T Consensus         2 MWiS~~~iglMfisv~~i~~sR   23 (58)
T PF10966_consen    2 MWISFGAIGLMFISVILIYFSR   23 (58)
T ss_pred             cchHHHHHHHHHHHHHHHHHHH
Confidence            5677777777777776666654


No 136
>PF14126 DUF4293:  Domain of unknown function (DUF4293)
Probab=42.21  E-value=2.2e+02  Score=24.37  Aligned_cols=13  Identities=31%  Similarity=0.628  Sum_probs=6.6

Q ss_pred             HhhHhHHHHHHHH
Q 045393          540 CVIGCLLPFIFYV  552 (580)
Q Consensus       540 ~~~~~~~~~~~~~  552 (580)
                      ..++.++|+...+
T Consensus       115 ~~~g~~lp~vaii  127 (149)
T PF14126_consen  115 FGIGFFLPLVAII  127 (149)
T ss_pred             hHHHHHHHHHHHH
Confidence            4455555555444


No 137
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=41.99  E-value=5.3e+02  Score=28.65  Aligned_cols=262  Identities=10%  Similarity=0.031  Sum_probs=0.0

Q ss_pred             HHHHHHcCCHHHHHHHhhh--cCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393            5 LLEVLRHGDEYKIKQLALR--QDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI   82 (580)
Q Consensus         5 L~~A~~~g~~~~~~~ll~~--~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~   82 (580)
                      +..-++.|+.+-...+++.  ..-.......-.+.+...+..|..+-.+.+.+.-..       .-....-....+.+..
T Consensus       297 i~~y~~~g~~~eA~~lf~~M~~~g~~pd~~t~~~ll~a~~~~g~~~~a~~i~~~m~~-------~g~~~d~~~~~~Li~~  369 (697)
T PLN03081        297 LAGYALHGYSEEALCLYYEMRDSGVSIDQFTFSIMIRIFSRLALLEHAKQAHAGLIR-------TGFPLDIVANTALVDL  369 (697)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhccchHHHHHHHHHHHH-------hCCCCCeeehHHHHHH


Q ss_pred             HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCc-----HHHHHHHHHcCCCCCcccccCCC
Q 045393           83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQH-----KRVIRILVEKDSVPSSYINKAYQ  157 (580)
Q Consensus        83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~-----~~~v~~Ll~~~~~~~~~~~~~g~  157 (580)
                      -++.|+.+-+..+.+....                +|..-.+.|..+.....     .++++.+.+.|..++   .....
T Consensus       370 y~k~G~~~~A~~vf~~m~~----------------~d~~t~n~lI~~y~~~G~~~~A~~lf~~M~~~g~~Pd---~~T~~  430 (697)
T PLN03081        370 YSKWGRMEDARNVFDRMPR----------------KNLISWNALIAGYGNHGRGTKAVEMFERMIAEGVAPN---HVTFL  430 (697)
T ss_pred             HHHCCCHHHHHHHHHhCCC----------------CCeeeHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC---HHHHH


Q ss_pred             CHHHHHHHcCcHHHHHHHHhcCCC-CcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcC
Q 045393          158 TPLSIAIDARLNDIACFIIDKSPE-SLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASG  236 (580)
Q Consensus       158 tpL~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g  236 (580)
                      +.|...+..|..+-...+++.-.. .....+...-...+......|+.+-+..+++..+..++..-  ..+.|......|
T Consensus       431 ~ll~a~~~~g~~~~a~~~f~~m~~~~g~~p~~~~y~~li~~l~r~G~~~eA~~~~~~~~~~p~~~~--~~~Ll~a~~~~g  508 (697)
T PLN03081        431 AVLSACRYSGLSEQGWEIFQSMSENHRIKPRAMHYACMIELLGREGLLDEAYAMIRRAPFKPTVNM--WAALLTACRIHK  508 (697)
T ss_pred             HHHHHHhcCCcHHHHHHHHHHHHHhcCCCCCccchHhHHHHHHhcCCHHHHHHHHHHCCCCCCHHH--HHHHHHHHHHcC


Q ss_pred             ChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCC
Q 045393          237 NVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRS  295 (580)
Q Consensus       237 ~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t  295 (580)
                      +.+..+...+.-..........-......-+..|+.+-+..+.+...+ ...+-..|.+
T Consensus       509 ~~~~a~~~~~~l~~~~p~~~~~y~~L~~~y~~~G~~~~A~~v~~~m~~-~g~~k~~g~s  566 (697)
T PLN03081        509 NLELGRLAAEKLYGMGPEKLNNYVVLLNLYNSSGRQAEAAKVVETLKR-KGLSMHPACT  566 (697)
T ss_pred             CcHHHHHHHHHHhCCCCCCCcchHHHHHHHHhCCCHHHHHHHHHHHHH-cCCccCCCee


No 138
>PLN03218 maturation of RBCL 1; Provisional
Probab=37.99  E-value=2.1e+02  Score=33.57  Aligned_cols=20  Identities=10%  Similarity=0.280  Sum_probs=10.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHh
Q 045393          193 TLIHFVVMRQNYDIMVKILG  212 (580)
Q Consensus       193 t~L~~A~~~~~~~~~~~Ll~  212 (580)
                      +.+...+..|+.+.+..+++
T Consensus       619 sLI~ay~k~G~~deAl~lf~  638 (1060)
T PLN03218        619 IAVNSCSQKGDWDFALSIYD  638 (1060)
T ss_pred             HHHHHHHhcCCHHHHHHHHH
Confidence            34445555666655555543


No 139
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=37.70  E-value=51  Score=34.10  Aligned_cols=160  Identities=14%  Similarity=0.133  Sum_probs=75.5

Q ss_pred             HHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHH
Q 045393          126 LHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYD  205 (580)
Q Consensus       126 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~  205 (580)
                      +..|+.+++.+-+..+++.+.-........+.....+--..|..|++-.+..            +..+-+..|+..|+.+
T Consensus       268 fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~------------D~~~rFeLAl~lg~L~  335 (443)
T PF04053_consen  268 FKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT------------DPDHRFELALQLGNLD  335 (443)
T ss_dssp             HHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS-------------HHHHHHHHHHCT-HH
T ss_pred             HHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC------------ChHHHhHHHHhcCCHH
Confidence            4567778887776555543322222223334444444445555555443321            2345567777788877


Q ss_pred             HHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCc
Q 045393          206 IMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDA  285 (580)
Q Consensus       206 ~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~  285 (580)
                      .+..+.+......     ..+..-..|...|+.++++.-.++..+.        ...+.+....|+.+-++.|.+.... 
T Consensus       336 ~A~~~a~~~~~~~-----~W~~Lg~~AL~~g~~~lAe~c~~k~~d~--------~~L~lLy~~~g~~~~L~kl~~~a~~-  401 (443)
T PF04053_consen  336 IALEIAKELDDPE-----KWKQLGDEALRQGNIELAEECYQKAKDF--------SGLLLLYSSTGDREKLSKLAKIAEE-  401 (443)
T ss_dssp             HHHHHCCCCSTHH-----HHHHHHHHHHHTTBHHHHHHHHHHCT-H--------HHHHHHHHHCT-HHHHHHHHHHHHH-
T ss_pred             HHHHHHHhcCcHH-----HHHHHHHHHHHcCCHHHHHHHHHhhcCc--------cccHHHHHHhCCHHHHHHHHHHHHH-
Confidence            7766665433210     1112223455667777777766665443        2334555666777766666543211 


Q ss_pred             cccccCCCCCHHHHHHHcCC-HHHHHHHhcC
Q 045393          286 IEIRNNSDRSILHVAAKHGN-WNIVSFILRS  315 (580)
Q Consensus       286 ~~~~d~~g~t~Lh~A~~~~~-~~iv~~Ll~~  315 (580)
                          ..+-+.+++.+...|+ .+++++|++.
T Consensus       402 ----~~~~n~af~~~~~lgd~~~cv~lL~~~  428 (443)
T PF04053_consen  402 ----RGDINIAFQAALLLGDVEECVDLLIET  428 (443)
T ss_dssp             ----TT-HHHHHHHHHHHT-HHHHHHHHHHT
T ss_pred             ----ccCHHHHHHHHHHcCCHHHHHHHHHHc
Confidence                1112245555555555 3466666655


No 140
>PF10777 YlaC:  Inner membrane protein YlaC;  InterPro: IPR019713  The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis []. 
Probab=34.61  E-value=1.3e+02  Score=25.48  Aligned_cols=23  Identities=9%  Similarity=0.080  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045393          506 AIGFTWIALVSMTLAFVTGLYAVLSN  531 (580)
Q Consensus       506 ~~~~~~~~~~~~~~af~~~~~~~~~~  531 (580)
                      .+..+|   ++|.++|++.+.++...
T Consensus        34 ~HP~L~---~~M~~~y~~~~~lm~~s   56 (155)
T PF10777_consen   34 NHPYLC---LAMYAAYLAVAALMYYS   56 (155)
T ss_pred             hCcHHH---HHHHHHHHHHHHHHHhc
Confidence            345554   56778888877776643


No 141
>PF12304 BCLP:  Beta-casein like protein;  InterPro: IPR020977  This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[]. 
Probab=30.75  E-value=2.2e+02  Score=25.11  Aligned_cols=32  Identities=13%  Similarity=0.161  Sum_probs=26.2

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHhhhcccchh
Q 045393          467 QAFVITDTIAMTSAMAAAAIIFWSFWRSKTES  498 (580)
Q Consensus       467 ~~f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~  498 (580)
                      .-|.++|.+|..+-+.+++.-+.++.-+|..+
T Consensus        38 ~eY~vsNiisv~Sgll~I~~GI~AIvlSrnl~   69 (188)
T PF12304_consen   38 LEYAVSNIISVTSGLLSIICGIVAIVLSRNLR   69 (188)
T ss_pred             ehhhHHHHHHHHHHHHHHHHhHHHHhhhccCC
Confidence            36788999999999999988888888766544


No 142
>PLN03218 maturation of RBCL 1; Provisional
Probab=29.68  E-value=2.1e+02  Score=33.55  Aligned_cols=50  Identities=6%  Similarity=-0.095  Sum_probs=24.2

Q ss_pred             HHHHHHcCCHHHHHHHhhhcCcc-cccC-CCCCchhhHHHhcCCHHHHHHHH
Q 045393            5 LLEVLRHGDEYKIKQLALRQDIF-STSS-PGGNAVLHMAVRFRNQQVIREIL   54 (580)
Q Consensus         5 L~~A~~~g~~~~~~~ll~~~~~~-~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll   54 (580)
                      +...++.|+.+....+++.-... ...| ...++.+...++.|+.+-+..++
T Consensus       479 I~~y~k~G~vd~A~~vf~eM~~~Gv~PdvvTynaLI~gy~k~G~~eeAl~lf  530 (1060)
T PLN03218        479 ISTCAKSGKVDAMFEVFHEMVNAGVEANVHTFGALIDGCARAGQVAKAFGAY  530 (1060)
T ss_pred             HHHHHhCcCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCcCHHHHHHHH
Confidence            34456777777666666542100 0011 11234455666677755443333


No 143
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=29.66  E-value=4e+02  Score=23.63  Aligned_cols=20  Identities=20%  Similarity=0.187  Sum_probs=12.8

Q ss_pred             hHHHHhhhhcccCCccccCC
Q 045393          432 LIATFTFTAAFTIPGGVKSD  451 (580)
Q Consensus       432 Liatv~f~a~~~~pgg~~~~  451 (580)
                      +-+...|+..|++.-.+...
T Consensus        66 ~gtPTe~v~sf~~k~~~kaa   85 (226)
T COG4858          66 LGTPTEWVVSFDPKVAVKAA   85 (226)
T ss_pred             cCCchHHHhhcCcchhcccC
Confidence            33556688888876655443


No 144
>PF11026 DUF2721:  Protein of unknown function (DUF2721);  InterPro: IPR021279  This family is conserved in bacteria. The function is not known. 
Probab=29.42  E-value=2.3e+02  Score=23.54  Aligned_cols=21  Identities=14%  Similarity=0.127  Sum_probs=9.8

Q ss_pred             HhHHHHHHHHHHHHHHHHhhh
Q 045393          472 TDTIAMTSAMAAAAIIFWSFW  492 (580)
Q Consensus       472 ~~~~a~~~s~~~~~~~~~~~~  492 (580)
                      +.++|+++++.++++++.+..
T Consensus        68 ~~~~s~ll~~l~i~~lf~~~~   88 (130)
T PF11026_consen   68 LATLSALLVCLVILLLFLSAL   88 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            344454444444444454433


No 145
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=27.75  E-value=49  Score=27.56  Aligned_cols=10  Identities=10%  Similarity=0.345  Sum_probs=4.6

Q ss_pred             hhhhhHHhhH
Q 045393          534 AITIAVCVIG  543 (580)
Q Consensus       534 ~~~~~~~~~~  543 (580)
                      |+++++++++
T Consensus         2 W~l~~iii~~   11 (130)
T PF12273_consen    2 WVLFAIIIVA   11 (130)
T ss_pred             eeeHHHHHHH
Confidence            5544444444


No 146
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=26.99  E-value=23  Score=37.03  Aligned_cols=48  Identities=17%  Similarity=0.172  Sum_probs=25.1

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCCh
Q 045393          292 SDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHS  342 (580)
Q Consensus       292 ~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~  342 (580)
                      ...++++..+.....+.+..++..+   ..-..++..|+|+||.+...++.
T Consensus       135 ~~~~~~~~~~s~~~~~~~~~~l~~~---~~~~~~~~~g~t~L~~tl~~~~~  182 (503)
T KOG0513|consen  135 DLNLALRILVSGDKYSGAEVLLTKY---EIADAREVLGNTKLHLTLTKENL  182 (503)
T ss_pred             ccccceeeeecCccccceeeccccc---ccchhhhhcCCceeeeeccCCCc
Confidence            3445555555555555555555432   11334445666666666665544


No 147
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.66  E-value=2e+02  Score=21.57  Aligned_cols=48  Identities=19%  Similarity=0.333  Sum_probs=27.9

Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhhhcccchhhhhhHhhHHHHHHH-HHHHHHHHHHHHHHHHhc
Q 045393          468 AFVITDTIAMTSAMAAAAIIFWSFWRSKTESLMDTLPLAIGFTWI-ALVSMTLAFVTGLYAVLS  530 (580)
Q Consensus       468 ~f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~af~~~~~~~~~  530 (580)
                      ++++++..||..|.+...+-+|-.+-            -   .|+ +..+|.++|.+|.-+.+.
T Consensus        15 awi~f~waafg~s~~m~~~gi~~lPV------------D---~w~KGy~~MG~lfltgSt~tL~   63 (95)
T COG4298          15 AWIMFNWAAFGASYFMLGLGIWLLPV------------D---LWTKGYWAMGILFLTGSTVTLV   63 (95)
T ss_pred             hhHhHHHHHHHHHHHHHHHHhheech------------H---HHHHHHHHHHHHHHhcchhhhh
Confidence            56778899999887666543322111            0   111 445677777777655554


No 148
>PF04304 DUF454:  Protein of unknown function (DUF454);  InterPro: IPR007401 This is a predicted membrane protein.
Probab=26.22  E-value=1.5e+02  Score=21.36  Aligned_cols=22  Identities=23%  Similarity=0.220  Sum_probs=13.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Q 045393          510 TWIALVSMTLAFVTGLYAVLSN  531 (580)
Q Consensus       510 ~~~~~~~~~~af~~~~~~~~~~  531 (580)
                      -+.++.+|.+.+..+.+.+.++
T Consensus        29 K~~a~~~m~~~~~~s~~~~~~~   50 (71)
T PF04304_consen   29 KIRALLMMWLSMGISAFFFVPN   50 (71)
T ss_pred             HHHHHHHHHHHHHHHHHHHccH
Confidence            3456666666666665555554


No 149
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=24.47  E-value=6.8e+02  Score=25.41  Aligned_cols=24  Identities=8%  Similarity=0.090  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHHHhhhcccchh
Q 045393          475 IAMTSAMAAAAIIFWSFWRSKTES  498 (580)
Q Consensus       475 ~a~~~s~~~~~~~~~~~~~~~~~~  498 (580)
                      .|+.+|++..++++-....+++..
T Consensus       155 ta~las~vl~~lmv~vIi~srk~~  178 (441)
T KOG3788|consen  155 TATLASLVLGILMVVVIIGSRKYD  178 (441)
T ss_pred             HHHHHHHHHHHHHhheeeeeeccC
Confidence            344455555555554445555444


No 150
>KOG3462 consensus Predicted membrane protein [Function unknown]
Probab=24.40  E-value=3.3e+02  Score=20.90  Aligned_cols=15  Identities=13%  Similarity=0.204  Sum_probs=11.3

Q ss_pred             HhHHHHHHHHHHHHH
Q 045393          472 TDTIAMTSAMAAAAI  486 (580)
Q Consensus       472 ~~~~a~~~s~~~~~~  486 (580)
                      .|.+++++|+..+++
T Consensus        36 mn~lgmIfsmcGlM~   50 (105)
T KOG3462|consen   36 MNFLGMIFSMCGLMF   50 (105)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            677888888877664


No 151
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=23.78  E-value=4.7e+02  Score=22.49  Aligned_cols=36  Identities=17%  Similarity=0.350  Sum_probs=27.9

Q ss_pred             ccccccchhHHHHHHhHHHHHHHHHHHHHHHHhhhc
Q 045393          458 ATLLHRASFQAFVITDTIAMTSAMAAAAIIFWSFWR  493 (580)
Q Consensus       458 ~~~~~~~~~~~f~~~~~~a~~~s~~~~~~~~~~~~~  493 (580)
                      ....+.++|+.|++.|.++...|+..+...++....
T Consensus        36 a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~   71 (154)
T TIGR01569        36 AKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLK   71 (154)
T ss_pred             eeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            445567889999999999999999888765554443


No 152
>PHA03239 envelope glycoprotein M; Provisional
Probab=21.16  E-value=9.1e+02  Score=24.83  Aligned_cols=131  Identities=14%  Similarity=0.073  Sum_probs=0.0

Q ss_pred             ccccCCCCCCCccccc-ccchhHHHHHHhHHHHHHHHHHHHHHHHhhhcccchh-----hhhh--HhhHHHHHHHHHHHH
Q 045393          446 GGVKSDGPDEGTATLL-HRASFQAFVITDTIAMTSAMAAAAIIFWSFWRSKTES-----LMDT--LPLAIGFTWIALVSM  517 (580)
Q Consensus       446 gg~~~~~~~~g~~~~~-~~~~~~~f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~  517 (580)
                      ||.|.+....++|++. ..+.-..|++.-.+.+++..+-.++--.....++...     ...+  +......+++++++|
T Consensus        80 ~gv~~~~~~~~tP~LFLe~p~~v~y~~~t~lv~la~aiYyivgav~i~r~~~~~~~~~~~~~~~~~i~s~~tlflgil~~  159 (429)
T PHA03239         80 GGGMAGAKGDGAKIFFLEPPSILAFTFSAAFVMLAVAIYLIAGAIRIHMCGKNFDELRGASEIARAIATMTSLFLGLFSA  159 (429)
T ss_pred             cccccccccCCCCceeecCCeeeehHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHcCHHHHHHHHHHH


Q ss_pred             --HHHHHHHHHHHhcCCchhhhhHHhhHhHHHHHHHH---HHHHHHHHHHhhhcCchHHHHHHh
Q 045393          518 --TLAFVTGLYAVLSNSLAITIAVCVIGCLLPFIFYV---SAPFFMIVFDQTEVNPFALVVRFV  576 (580)
Q Consensus       518 --~~af~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  576 (580)
                        .-+|+..+.-=++....++..+..++++++...|+   .-+-..-.+.+.-++.=..+||.+
T Consensus       160 WtlQlfVllLS~Kli~LAAfvY~~HF~~~~~f~~~f~~rG~ss~~y~~~~~~l~~~~~~lhrlv  223 (429)
T PHA03239        160 WAEHAFLILLAYKQLGIAATAFVGIFIAFLLFMGCFAGGGKIPDNNAKFELDIKEVCKDLHALI  223 (429)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcccccchHHHHh


No 153
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=20.88  E-value=24  Score=36.88  Aligned_cols=30  Identities=13%  Similarity=0.076  Sum_probs=22.0

Q ss_pred             cccccCCCCcHHHHHHHhCCHHHHHHHHhc
Q 045393           69 LRQKNLMDETALHIAARIGDRAIVSEIMKY   98 (580)
Q Consensus        69 ~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~   98 (580)
                      +.+....+.++.++....|+...++.....
T Consensus        48 i~~~~s~~~~~~~l~~~~g~~~~~~~a~~f   77 (503)
T KOG0513|consen   48 INQGVSLAYLELRLQNIDGDPSAARLADYF   77 (503)
T ss_pred             hhhhhhhcccHHHHHhccCChHhhHhhhcc
Confidence            455667788899999999988766655543


No 154
>PF02990 EMP70:  Endomembrane protein 70;  InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=20.76  E-value=7.1e+02  Score=26.53  Aligned_cols=27  Identities=15%  Similarity=0.004  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc-CCchh
Q 045393          509 FTWIALVSMTLAFVTGLYAVLS-NSLAI  535 (580)
Q Consensus       509 ~~~~~~~~~~~af~~~~~~~~~-~~~~~  535 (580)
                      +.+.++.+.+..|+++-....- ...|.
T Consensus       303 i~~y~~~~~iaGy~S~~~yk~~~g~~W~  330 (521)
T PF02990_consen  303 IILYALTSFIAGYVSARLYKSFGGKKWK  330 (521)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence            3445566677777766555443 33454


No 155
>PF05313 Pox_P21:  Poxvirus P21 membrane protein;  InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=20.70  E-value=3.2e+02  Score=24.04  Aligned_cols=11  Identities=18%  Similarity=0.471  Sum_probs=5.2

Q ss_pred             HHHHHHHHHHH
Q 045393          516 SMTLAFVTGLY  526 (580)
Q Consensus       516 ~~~~af~~~~~  526 (580)
                      |+++||+..+-
T Consensus        97 sLVIaYCl~mq  107 (189)
T PF05313_consen   97 SLVIAYCLSMQ  107 (189)
T ss_pred             HHHHHHHHHhe
Confidence            44445554443


No 156
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=20.70  E-value=59  Score=28.86  Aligned_cols=47  Identities=28%  Similarity=0.389  Sum_probs=33.4

Q ss_pred             ccCCCCcHHHHHHhcCChhHHHH-hhcCcccc----cccccccCCCCCHHHHHHH
Q 045393          325 VDRNGNTPLHLAAMGLHSDVVFT-LSRHKSVN----IRAKNHSARSNTALEIAEI  374 (580)
Q Consensus       325 ~d~~G~T~Lh~A~~~~~~~~~~~-Ll~~~~~d----~~~~n~~~~g~t~l~~a~~  374 (580)
                      .|.+...|||-|+.-++.+++-. +++. .+.    .|--|.  +|-.+|++|..
T Consensus       218 Id~kTe~~LHk~iki~REDVl~LYfie~-dakiP~~LNd~D~--nG~~ALdiAL~  269 (280)
T KOG4591|consen  218 IDGKTENPLHKAIKIEREDVLFLYFIEM-DAKIPGILNDADH--NGALALDIALC  269 (280)
T ss_pred             HcCCCcchhHHhhhccccceeeehhhhc-cccccccccccCC--CchHHHHHHHH
Confidence            34556679999999999888763 4433 222    344566  89999999976


Done!