Query 045393
Match_columns 580
No_of_seqs 608 out of 3657
Neff 10.2
Searched_HMMs 13730
Date Mon Mar 25 22:44:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045393.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045393hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 1.9E-48 1.4E-52 397.9 40.9 363 3-393 2-384 (408)
2 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 1.3E-42 9.4E-47 354.3 36.1 325 35-399 1-357 (408)
3 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 1.7E-36 1.2E-40 288.0 22.3 245 30-317 5-249 (255)
4 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 3.1E-35 2.3E-39 279.2 22.4 246 71-355 4-250 (255)
5 d1wdya_ d.211.1.1 (A:) RNase L 100.0 1.7E-34 1.2E-38 278.8 27.8 267 75-361 4-284 (285)
6 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 6.4E-34 4.6E-38 263.9 23.3 220 122-350 3-222 (223)
7 d1wdya_ d.211.1.1 (A:) RNase L 100.0 4.5E-33 3.3E-37 268.7 28.8 266 34-327 5-284 (285)
8 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 3.9E-33 2.8E-37 258.6 25.8 220 34-314 3-222 (223)
9 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 7.5E-33 5.5E-37 258.0 24.3 223 35-315 1-225 (229)
10 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 3.6E-34 2.6E-38 275.3 14.8 268 3-313 2-274 (277)
11 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 7.7E-34 5.6E-38 272.9 15.5 258 35-351 1-276 (277)
12 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 1.7E-32 1.3E-36 255.6 23.7 226 77-355 1-228 (229)
13 d1s70b_ d.211.1.1 (B:) Myosin 100.0 3.7E-33 2.7E-37 270.3 19.5 236 32-301 38-273 (291)
14 d1s70b_ d.211.1.1 (B:) Myosin 100.0 6.1E-33 4.4E-37 268.7 14.5 244 74-349 38-281 (291)
15 d1k1aa_ d.211.1.1 (A:) bcl-3 { 100.0 1.6E-29 1.2E-33 233.9 22.2 222 75-346 2-227 (228)
16 d1k1aa_ d.211.1.1 (A:) bcl-3 { 100.0 6.8E-29 5E-33 229.6 21.5 222 33-310 2-227 (228)
17 d1iknd_ d.211.1.1 (D:) I-kappa 100.0 1E-29 7.6E-34 235.1 15.7 198 75-317 1-202 (221)
18 d1ot8a_ d.211.1.1 (A:) Neuroge 100.0 1.5E-28 1.1E-32 225.2 20.5 207 89-312 2-208 (209)
19 d1iknd_ d.211.1.1 (D:) I-kappa 100.0 4.9E-29 3.6E-33 230.5 14.5 199 33-284 1-203 (221)
20 d1ot8a_ d.211.1.1 (A:) Neuroge 100.0 4.9E-28 3.6E-32 221.7 19.3 207 135-348 2-208 (209)
21 d2ajaa1 a.118.24.1 (A:3-348) H 99.9 1.8E-30 1.3E-34 256.4 -8.1 130 30-179 86-220 (346)
22 d2ajaa1 a.118.24.1 (A:3-348) H 99.9 7.3E-30 5.3E-34 252.0 -7.4 273 77-352 47-340 (346)
23 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 2.1E-25 1.5E-29 193.6 15.5 152 193-351 4-155 (156)
24 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 1.3E-24 9.5E-29 188.7 18.3 154 3-179 3-156 (156)
25 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 2.8E-24 2E-28 186.4 18.1 151 3-178 4-155 (156)
26 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 3E-24 2.2E-28 186.3 16.6 154 36-248 3-156 (156)
27 d1awcb_ d.211.1.1 (B:) GA bind 99.9 9.6E-24 7E-28 182.4 16.2 150 192-348 3-152 (153)
28 d1awcb_ d.211.1.1 (B:) GA bind 99.9 6.7E-23 4.9E-27 177.0 18.4 149 3-175 4-152 (153)
29 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 4.8E-24 3.5E-28 206.2 10.6 180 190-373 106-300 (301)
30 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 3.6E-23 2.6E-27 199.9 10.1 185 119-337 104-300 (301)
31 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 4.1E-23 3E-27 171.1 8.9 120 225-350 3-123 (125)
32 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 1.5E-23 1.1E-27 171.7 5.7 105 261-372 4-108 (118)
33 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 1.4E-22 1E-26 167.9 10.7 120 34-177 3-123 (125)
34 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 5.4E-23 3.9E-27 168.4 7.0 115 226-349 3-117 (118)
35 d1ycsb1 d.211.1.1 (B:327-456) 99.9 3.4E-22 2.5E-26 166.7 10.5 122 36-179 3-126 (130)
36 d1ycsb1 d.211.1.1 (B:327-456) 99.8 2E-21 1.4E-25 161.9 10.8 119 227-350 3-124 (130)
37 d1dcqa1 d.211.1.1 (A:369-522) 99.8 1.5E-20 1.1E-24 160.8 15.8 124 4-149 9-141 (154)
38 d1dcqa1 d.211.1.1 (A:369-522) 99.8 4.6E-20 3.4E-24 157.6 14.6 119 229-351 10-136 (154)
39 d1rzhh2 f.23.10.1 (H:11-35) Ph 20.7 50 0.0036 16.1 2.8 7 559-565 18-24 (26)
No 1
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.9e-48 Score=397.89 Aligned_cols=363 Identities=26% Similarity=0.316 Sum_probs=324.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393 3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI 82 (580)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~ 82 (580)
++||.||..|+++++++|++.|...+..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad---------i~~~~~~g~t~L~~ 72 (408)
T d1n11a_ 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK---------VNAKAKDDQTPLHC 72 (408)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC---------SSCCCTTSCCHHHH
T ss_pred ChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCC---------CCCCCCCCCCHHHH
Confidence 589999999999999999999987888999999999999999999999999999998 89999999999999
Q ss_pred HHHhCCHHHHHHHHhcCcccccCCCcch--------------------hhhhhhccCCCCCcHHHHHHHcCcHHHHHHHH
Q 045393 83 AARIGDRAIVSEIMKYLPAVNQVGPAPV--------------------LESLFRMTDIEGNTPLHNAVTNQHKRVIRILV 142 (580)
Q Consensus 83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~--------------------~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll 142 (580)
|+..|+.+++++|++.+.+......... ........+.++.++++.|+..++.+++++|+
T Consensus 73 A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll 152 (408)
T d1n11a_ 73 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL 152 (408)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHH
Confidence 9999999999999998876443222111 01223456788999999999999999999999
Q ss_pred HcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccC
Q 045393 143 EKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLD 222 (580)
Q Consensus 143 ~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d 222 (580)
+++.+++ ..+.+|.+||+.|+..|+.+++++|++++. +++..+. .|.+|+|.+......+....++..... ....+
T Consensus 153 ~~~~~~~-~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~-~~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~~ 228 (408)
T d1n11a_ 153 ERDAHPN-AAGKNGLTPLHVAVHHNNLDIVKLLLPRGG-SPHSPAW-NGYTPLHIAAKQNQVEVARSLLQYGGS-ANAES 228 (408)
T ss_dssp HTTCCTT-CCCSSCCCHHHHHHHTTCHHHHHHHGGGTC-CSCCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCC
T ss_pred HcCCCCC-cCCCcCchHHHHHHHcCCHHHHHHHHhcCC-cccccCC-CCCCcchhhhccchhhhhhhhhhcccc-ccccC
Confidence 9999887 578889999999999999999999999985 4455555 899999999999999999999887766 66778
Q ss_pred CCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHH
Q 045393 223 WHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAK 302 (580)
Q Consensus 223 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 302 (580)
..|.|||+.|+..++.++++.+.+.+... +..+..|.||++.|+..++.+++++|+++|++ ++..+..+.||||.++.
T Consensus 229 ~~~~t~l~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~-~~~~~~~~~t~L~~~~~ 306 (408)
T d1n11a_ 229 VQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASH 306 (408)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHH
T ss_pred CCCCCHHHHHHHhCcHhHhhhhhcccccc-ccccCCCCChhhhhhhcCcHHHHHHHHHCCCc-cccccccccccchhhcc
Confidence 88999999999999999999999988776 67788999999999999999999999999999 88899999999999999
Q ss_pred cCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhh
Q 045393 303 HGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEI 382 (580)
Q Consensus 303 ~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~ 382 (580)
.++.++++++++. +.++|.+|.+|+||||+|+++|+.+++++|+++ |+|+|++|. +|+|||++|.. .
T Consensus 307 ~~~~~~~~~ll~~---g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~-GAd~n~~d~--~G~t~L~~A~~-------~ 373 (408)
T d1n11a_ 307 YGNIKLVKFLLQH---QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN-GASPNEVSS--DGTTPLAIAKR-------L 373 (408)
T ss_dssp SSCSHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCS--SSCCHHHHHHH-------T
T ss_pred cCcceeeeeeccc---cccccccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCC--CCCCHHHHHHH-------c
Confidence 9999999999998 455999999999999999999999999999975 999999999 99999999998 3
Q ss_pred HHHHHHHHHHH
Q 045393 383 QKHLTLKALKT 393 (580)
Q Consensus 383 ~~~~~~~~L~~ 393 (580)
++.+++++|..
T Consensus 374 ~~~~iv~~L~~ 384 (408)
T d1n11a_ 374 GYISVTDVLKV 384 (408)
T ss_dssp TCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 45567776643
No 2
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.3e-42 Score=354.35 Aligned_cols=325 Identities=26% Similarity=0.372 Sum_probs=295.0
Q ss_pred CchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhh
Q 045393 35 NAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESL 114 (580)
Q Consensus 35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 114 (580)
.||||+||..|+.++|++|+++|++ ++.+|..|+||||+|++.|+.+++++|+++|++++
T Consensus 1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~---------in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~----------- 60 (408)
T d1n11a_ 1 LTPLHVASFMGHLPIVKNLLQRGAS---------PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN----------- 60 (408)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSS-----------
T ss_pred CChHHHHHHCcCHHHHHHHHHCCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-----------
Confidence 3899999999999999999999998 89999999999999999999999999999999876
Q ss_pred hhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC--------------------------------cccccCCCCHHHH
Q 045393 115 FRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPS--------------------------------SYINKAYQTPLSI 162 (580)
Q Consensus 115 l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~--------------------------------~~~~~~g~tpL~~ 162 (580)
.+|.+|.||||+|+..|+.+++++|++.+++.. ...+..+.++++.
T Consensus 61 --~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 138 (408)
T d1n11a_ 61 --AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHV 138 (408)
T ss_dssp --CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred --CCCCCCCCHHHHHHHcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHH
Confidence 578899999999999999999999998765432 2235678899999
Q ss_pred HHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHH
Q 045393 163 AIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQ 242 (580)
Q Consensus 163 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~ 242 (580)
|+..++.+++++|++++. .++..+. .+.+|||.|+..++.++++.|+.++.+ ++..+..|.||+|.+....+.+...
T Consensus 139 a~~~~~~~~v~~ll~~~~-~~~~~~~-~~~~~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~t~l~~~~~~~~~~~~~ 215 (408)
T d1n11a_ 139 AAKYGKVRVAELLLERDA-HPNAAGK-NGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVAR 215 (408)
T ss_dssp HHHTTCHHHHHHHHHTTC-CTTCCCS-SCCCHHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCC-CCCcCCC-cCchHHHHHHHcCCHHHHHHHHhcCCc-ccccCCCCCCcchhhhccchhhhhh
Confidence 999999999999999984 4455555 889999999999999999999999876 7889999999999999999999999
Q ss_pred HHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhc
Q 045393 243 RLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLI 322 (580)
Q Consensus 243 ~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~ 322 (580)
.++..+... ...+..|.||+|.|+..++.++++.+.+.+.. .+..|..|.||++.|++.++.+++++|++++ .++
T Consensus 216 ~l~~~~~~~-~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g---~~~ 290 (408)
T d1n11a_ 216 SLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHG---VMV 290 (408)
T ss_dssp HHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT---CCT
T ss_pred hhhhccccc-cccCCCCCCHHHHHHHhCcHhHhhhhhccccc-cccccCCCCChhhhhhhcCcHHHHHHHHHCC---Ccc
Confidence 999888766 56678899999999999999999999999888 7888999999999999999999999999884 458
Q ss_pred ccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHHHHhhCChhhHHHHHHHHHHHhhhhhh
Q 045393 323 NLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAEITRANGKEIQKHLTLKALKTAYAKRA 399 (580)
Q Consensus 323 n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~L~~~ga~~~ 399 (580)
+..+..+.||||.++..++.++++.+++. |+++|.+|. +|.|||++|++ .++.+++++|+++||+..
T Consensus 291 ~~~~~~~~t~L~~~~~~~~~~~~~~ll~~-g~~in~~d~--~G~T~Lh~A~~-------~g~~~iv~~Ll~~GAd~n 357 (408)
T d1n11a_ 291 DATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTK--LGYSPLHQAAQ-------QGHTDIVTLLLKNGASPN 357 (408)
T ss_dssp TCCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCT--TSCCHHHHHHH-------TTCHHHHHHHHHTTCCSC
T ss_pred ccccccccccchhhcccCcceeeeeeccc-cccccccCC--CCCCHHHHHHH-------cCCHHHHHHHHHCCCCCC
Confidence 99999999999999999999999999975 899999999 99999999998 467889999999999854
No 3
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.7e-36 Score=287.96 Aligned_cols=245 Identities=20% Similarity=0.200 Sum_probs=137.8
Q ss_pred cCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcc
Q 045393 30 SSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAP 109 (580)
Q Consensus 30 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~ 109 (580)
.+.+|+||||+||++|+.+++++|++.|++ ...++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~------~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~------ 72 (255)
T d1oy3d_ 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAG------HEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL------ 72 (255)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTT------SGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS------
T ss_pred CCcCCCCHHHHHHHcCCHHHHHHHHHcCCC------cccccCcCCCCCCccchHHhhccccccccccccccccc------
Confidence 567788888888888888888888887765 12366777888888888888888888888888887765
Q ss_pred hhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCC
Q 045393 110 VLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLP 189 (580)
Q Consensus 110 ~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 189 (580)
.+|.+|.||||+|+..++.+++++|++.+........ ............+
T Consensus 73 -------~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~----~~~~~~~~~~~~~------------------- 122 (255)
T d1oy3d_ 73 -------VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDAS----DTYLTQSQDCTPD------------------- 122 (255)
T ss_dssp -------CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------------------------------
T ss_pred -------ccccccchhhhhhhccCchHHHHHHHhhccchhcccc----hhhhhHHhhhccc-------------------
Confidence 4677888888888888888888888876653321111 0000000000000
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHc
Q 045393 190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAEN 269 (580)
Q Consensus 190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 269 (580)
....++..............+.......++.+|.+|.||||+|+..++.+++++|++.+++.....+..|.||||+|++.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~ 202 (255)
T d1oy3d_ 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202 (255)
T ss_dssp ---------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred chHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccccccccccc
Confidence 00000011101111111111222222334455555666666666666666666666655555444445555666666655
Q ss_pred CcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcc
Q 045393 270 GKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPE 317 (580)
Q Consensus 270 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~ 317 (580)
|+.+++++|+++|++ ++.+|..|+||||+|+.+++.+++++|+++|+
T Consensus 203 ~~~~~v~~Ll~~gad-in~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga 249 (255)
T d1oy3d_ 203 QAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGA 249 (255)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 566666655555555 55555555555555555555555555555543
No 4
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=3.1e-35 Score=279.15 Aligned_cols=246 Identities=17% Similarity=0.191 Sum_probs=186.0
Q ss_pred cccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Q 045393 71 QKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSS 150 (580)
Q Consensus 71 ~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~ 150 (580)
..+.+|+||||+||++|+.+++++|+++|++.. .++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 4 ~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~----------~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~- 72 (255)
T d1oy3d_ 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE----------YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL- 72 (255)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSG----------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-
T ss_pred cCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----------cccCcCCCCCCccchHHhhccccccccccccccccc-
Confidence 457899999999999999999999999987743 345689999999999999999999999999999887
Q ss_pred ccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHH
Q 045393 151 YINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLH 230 (580)
Q Consensus 151 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~ 230 (580)
..|..|.||||+|+..++.+++++|++.......... ............+ ....++.
T Consensus 73 ~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~-----~~~~~~~~~~~~~------------------~~~~~~~ 129 (255)
T d1oy3d_ 73 VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDAS-----DTYLTQSQDCTPD------------------TSHAPAA 129 (255)
T ss_dssp CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------------
T ss_pred ccccccchhhhhhhccCchHHHHHHHhhccchhcccc-----hhhhhHHhhhccc------------------chHHHHH
Confidence 5789999999999999999999999987643221111 0000000000000 0001111
Q ss_pred HHHHcCCh-HHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHH
Q 045393 231 YAAASGNV-KMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIV 309 (580)
Q Consensus 231 ~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv 309 (580)
........ .........+... +.++..|.||||+|+..|+.+++++|++.+++.....+..|.||||+|++.|+.+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~i-n~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v 208 (255)
T d1oy3d_ 130 VDSQPNPENEEEPRDEDWRLQL-EAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVL 208 (255)
T ss_dssp --------------CCCGGGGT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred HHhhcchhHHHHHHhhhcCccc-ccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHH
Confidence 11111111 1112222233333 678899999999999999999999999999996667788999999999999999999
Q ss_pred HHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccc
Q 045393 310 SFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVN 355 (580)
Q Consensus 310 ~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d 355 (580)
++|+++ ++++|.+|.+|+||||+|+..++.+++++|+++ ||+
T Consensus 209 ~~Ll~~---gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~-Ga~ 250 (255)
T d1oy3d_ 209 ELLLKA---GADPTARMYGGRTPLGSALLRPNPILARLLRAH-GAP 250 (255)
T ss_dssp HHHHHT---TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT-TCC
T ss_pred HHHHHC---CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCC
Confidence 999998 455999999999999999999999999999976 775
No 5
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.7e-34 Score=278.81 Aligned_cols=267 Identities=21% Similarity=0.229 Sum_probs=229.6
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccccc
Q 045393 75 MDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINK 154 (580)
Q Consensus 75 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 154 (580)
+++|+||.|+++|+.++|++|+++|++++. ..+..|.||||+|+..|+.+++++|++.+.... ..+.
T Consensus 4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~------------~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~-~~~~ 70 (285)
T d1wdya_ 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNF------------QEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-LRKK 70 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTC------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCT
T ss_pred CCcHHHHHHHHcCCHHHHHHHHHCCCCcCc------------cCCCCCCCHHHHHHHcCCHHHhhhhcccccccc-cccc
Confidence 367999999999999999999999999763 245689999999999999999999999998776 4677
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCc---------cccccCCCC
Q 045393 155 AYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKE---------LIDRLDWHQ 225 (580)
Q Consensus 155 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~---------~~~~~d~~g 225 (580)
.+.+|.+.+...+..+.....++..... ...+. .+.++++.++..++...+..++..... .....+..|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (285)
T d1wdya_ 71 NGATPFLLAAIAGSVKLLKLFLSKGADV-NECDF-YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 148 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCT-TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCC
T ss_pred ccchhhHHHhhcCCccccchhhhhcccc-ccccc-CCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccC
Confidence 8899999999999999999999987543 23333 889999999999999999888875433 123345679
Q ss_pred ChHHHHHHHcCChHHHHHHHHh-chhcccccCCCCCcHHHHHHH----cCcHHHHHHHHHhCCCccccccCCCCCHHHHH
Q 045393 226 RNPLHYAAASGNVKMAQRLLEE-SKRLAYKRDCNGETPLHLAAE----NGKLKVLKLLINKYPDAIEIRNNSDRSILHVA 300 (580)
Q Consensus 226 ~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~----~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 300 (580)
.||||+|+++|+.+++++|+++ |+++ +..+..|.++.+.+.. .+..+++++|+++|++ ++.+|..|+||||+|
T Consensus 149 ~t~L~~A~~~~~~~~~~~Ll~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~-~n~~~~~g~t~L~~a 226 (285)
T d1wdya_ 149 ATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILA 226 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHhccCCCc-ccccCCCCcccccccccccchHHHHHHHHHHHCCCC-CCccCCCCCCccchh
Confidence 9999999999999999999986 4554 7778888888777654 3456799999999999 899999999999999
Q ss_pred HHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccccccccc
Q 045393 301 AKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVNIRAKNH 361 (580)
Q Consensus 301 ~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d~~~~n~ 361 (580)
++.|+.+++++|++.. +.++|.+|.+|+||||+|+++|+.+++++|+++ |+|+|++|.
T Consensus 227 ~~~~~~~~v~~lL~~~--g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~-GAd~n~~d~ 284 (285)
T d1wdya_ 227 VEKKHLGLVQRLLEQE--HIEINDTDSDGKTALLLAVELKLKKIAELLCKR-GASTDCGDL 284 (285)
T ss_dssp HHTTCHHHHHHHHHSS--SCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SSCSCCSSC
T ss_pred hhcCcHHHHHHHHHcC--CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCcccC
Confidence 9999999999999853 456999999999999999999999999999965 999999874
No 6
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.4e-34 Score=263.94 Aligned_cols=220 Identities=19% Similarity=0.271 Sum_probs=199.7
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHc
Q 045393 122 GNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMR 201 (580)
Q Consensus 122 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~ 201 (580)
++++|+.++..|+.+.++.+++.++......|..|+||||+|+..|+.++++++++....... ... .+.++++.++..
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~-~~~-~~~~~~~~~~~~ 80 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDD-AGWSPLHIAASA 80 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCC-CCT-TCCCHHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccc-ccc-cccccccccccc
Confidence 568999999999999998888887777778899999999999999999999999999854433 333 788999999999
Q ss_pred CCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 045393 202 QNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINK 281 (580)
Q Consensus 202 ~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 281 (580)
++.++++.|++++.+ ++..|.+|.||||+|+..|+.+++++|+++|.++ +.++..|.||||+|+..++.+++++|.+.
T Consensus 81 ~~~~i~~~Ll~~~~d-~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~-~~~~~~~~t~L~~a~~~~~~~~~~~L~~~ 158 (223)
T d1uoha_ 81 GRDEIVKALLGKGAQ-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYEATAMHRAAAKGNLKMIHILLYY 158 (223)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cccchhHHHhccCce-eEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCccchhhhhcCCcchhhhhccc
Confidence 999999999998865 8899999999999999999999999999999887 77889999999999999999999999999
Q ss_pred CCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhc
Q 045393 282 YPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSR 350 (580)
Q Consensus 282 ~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~ 350 (580)
+.+ ++.+|..|+||||+|+.+|+.+++++|++. +++++.+|.+|+||||+| ..|+.++++.|++
T Consensus 159 ~~~-i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~---Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~ 222 (223)
T d1uoha_ 159 KAS-TNIQDTEGNTPLHLACDEERVEEAKLLVSQ---GASIYIENKEEKTPLQVA-KGGLGLILKRMVE 222 (223)
T ss_dssp TCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred cce-eeeccCCCCceeccccccCcHHHHHHHHHC---CCCCCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence 999 899999999999999999999999999998 455999999999999998 5789999999984
No 7
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.5e-33 Score=268.67 Aligned_cols=266 Identities=17% Similarity=0.149 Sum_probs=230.7
Q ss_pred CCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccc-cCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhh
Q 045393 34 GNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQK-NLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLE 112 (580)
Q Consensus 34 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~-~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 112 (580)
++|+||.|++.|+.++|++|+++|++ ++.+ +..|+||||+|+..|+.+++++|++.+....
T Consensus 5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~d---------in~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~--------- 66 (285)
T d1wdya_ 5 DNHLLIKAVQNEDVDLVQQLLEGGAN---------VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV--------- 66 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------
T ss_pred CcHHHHHHHHcCCHHHHHHHHHCCCC---------cCccCCCCCCCHHHHHHHcCCHHHhhhhcccccccc---------
Confidence 57999999999999999999999998 6655 4579999999999999999999999987754
Q ss_pred hhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCC-------
Q 045393 113 SLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNT------- 185 (580)
Q Consensus 113 ~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~------- 185 (580)
..+..+.+|.+.|+..+..+.....++...+.. ..+..+.++++.|+..++...++.++.........
T Consensus 67 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (285)
T d1wdya_ 67 ----LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ 141 (285)
T ss_dssp ----CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHH
T ss_pred ----ccccccchhhHHHhhcCCccccchhhhhccccc-ccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhh
Confidence 367788999999999999999999999877655 46788999999999999999999998875432111
Q ss_pred -CCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcC----ChHHHHHHHHhchhcccccCCCCC
Q 045393 186 -TRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASG----NVKMAQRLLEESKRLAYKRDCNGE 260 (580)
Q Consensus 186 -~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g----~~~~v~~Ll~~~~~~~~~~~~~g~ 260 (580)
.....|.||||.|+.+++.+++++|+++.+..++..+..|.++++.+...+ ..+++++|+++|+++ +.++..|.
T Consensus 142 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~-n~~~~~g~ 220 (285)
T d1wdya_ 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGK 220 (285)
T ss_dssp HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTTSC
T ss_pred hhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCC-CccCCCCC
Confidence 112278999999999999999999999877778999999999888776544 357999999999987 67889999
Q ss_pred cHHHHHHHcCcHHHHHHHHHh-CCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccC
Q 045393 261 TPLHLAAENGKLKVLKLLINK-YPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDR 327 (580)
Q Consensus 261 tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~ 327 (580)
||||.|++.|+.+++++|+++ +.+ ++.+|.+|+||||+|+++|+.+++++|+++| +++|++|.
T Consensus 221 t~L~~a~~~~~~~~v~~lL~~~g~d-in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~G---Ad~n~~d~ 284 (285)
T d1wdya_ 221 TPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDCGDL 284 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS---SCSCCSSC
T ss_pred CccchhhhcCcHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCcccC
Confidence 999999999999999999986 556 8999999999999999999999999999994 45888873
No 8
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.9e-33 Score=258.62 Aligned_cols=220 Identities=27% Similarity=0.353 Sum_probs=161.9
Q ss_pred CCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhh
Q 045393 34 GNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLES 113 (580)
Q Consensus 34 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 113 (580)
+++.|+.+|..|+.+.++.++...+. .++.+|..|+||||+|+..|+.+++++|++.+....
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~~~~~--------~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~---------- 64 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESILADKS--------LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN---------- 64 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHHHCGG--------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC----------
T ss_pred CHHHHHHHHHhCCHHHHHHHHHhCCC--------cCcCcCCCCCCHHHHHHHhhhhcccccccccccccc----------
Confidence 46778888888888888888777665 577888888888888888888888888888776643
Q ss_pred hhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCcc
Q 045393 114 LFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELT 193 (580)
Q Consensus 114 ~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t 193 (580)
..+..+.++++.++..++.+++++|++++++++ ..|..|.||||+|+..|+.+++++|++++. +
T Consensus 65 ---~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~-~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~-d----------- 128 (223)
T d1uoha_ 65 ---DKDDAGWSPLHIAASAGRDEIVKALLGKGAQVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGA-N----------- 128 (223)
T ss_dssp ---CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-C-----------
T ss_pred ---cccccccccccccccccccchhHHHhccCceeE-eeCCCCCchhhHHHHcCCHHHHHHHHHCCC-C-----------
Confidence 345677888888888888888888888887665 466677777777777777777777776653 2
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHH
Q 045393 194 LIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLK 273 (580)
Q Consensus 194 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 273 (580)
++..+..|.||||+|+..++.+++++|.+.+.++ +.+|..|.||||.|+..|+.+
T Consensus 129 ------------------------~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i-~~~d~~g~TpL~~Aa~~g~~~ 183 (223)
T d1uoha_ 129 ------------------------PDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST-NIQDTEGNTPLHLACDEERVE 183 (223)
T ss_dssp ------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHH
T ss_pred ------------------------CCCcCCCCCccchhhhhcCCcchhhhhcccccee-eeccCCCCceeccccccCcHH
Confidence 3444556666777777777777777777666665 566677777777777777777
Q ss_pred HHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhc
Q 045393 274 VLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILR 314 (580)
Q Consensus 274 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 314 (580)
++++|+++|++ ++.+|.+|+||||+| ..|+.+++++|++
T Consensus 184 ~v~~LL~~Gad-~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~ 222 (223)
T d1uoha_ 184 EAKLLVSQGAS-IYIENKEEKTPLQVA-KGGLGLILKRMVE 222 (223)
T ss_dssp HHHHHHHTTCC-SCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred HHHHHHHCCCC-CCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence 77777777777 677777777777776 4577777777764
No 9
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=7.5e-33 Score=258.04 Aligned_cols=223 Identities=25% Similarity=0.298 Sum_probs=147.0
Q ss_pred CchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhh
Q 045393 35 NAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESL 114 (580)
Q Consensus 35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 114 (580)
++|||+||..|+.++++.|++.++. .++.+|.+|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~~~--------~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~---------- 62 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSKPS--------LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL---------- 62 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCGG--------GTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCG----------
T ss_pred CHhHHHHHHcCCHHHHHHHHHcCCC--------cccccCCCCCCHHHHHHHcCCccccchhhhhhccccc----------
Confidence 5899999999999999999987765 5888899999999999999999999999999887653
Q ss_pred hhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC-cccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCcc
Q 045393 115 FRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPS-SYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELT 193 (580)
Q Consensus 115 l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t 193 (580)
....+..|.+|+|+++..+..++++.++..+.... ...+..+.+|++.++..++.+++++|++.+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~------------ 130 (229)
T d1ixva_ 63 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS------------ 130 (229)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccc------------
Confidence 23467788999999999999999988888776443 23455566667766666666666666666532
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHH
Q 045393 194 LIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLK 273 (580)
Q Consensus 194 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 273 (580)
.+..|..|+||||+|+..|+.+++++|++.+....+.+|.+|+||||+|+..|+.+
T Consensus 131 ------------------------~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~ 186 (229)
T d1ixva_ 131 ------------------------VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD 186 (229)
T ss_dssp ------------------------SCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred ------------------------ccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHH
Confidence 23334444555555555555555555555443333444555555555555555555
Q ss_pred HHHHHHHh-CCCccccccCCCCCHHHHHHHcCCHHHHHHHhcC
Q 045393 274 VLKLLINK-YPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRS 315 (580)
Q Consensus 274 ~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 315 (580)
++++|+++ |++ ++.+|.+|+||||+|+. .+++++|+++
T Consensus 187 ~v~~Ll~~~gad-~~~~d~~g~t~l~~A~~---~~~~~~Ll~~ 225 (229)
T d1ixva_ 187 AAVLLVEKYGAE-YDLVDNKGAKAEDVALN---EQVKKFFLNN 225 (229)
T ss_dssp HHHHHHHHHCCC-SCCCCTTSCCTGGGCSC---HHHHHHHHHH
T ss_pred HHHHHHHhcCCC-CCCcCCCCCCHHHHHhh---HHHHHHHHHc
Confidence 55555532 444 45555555555555542 3455555544
No 10
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=3.6e-34 Score=275.28 Aligned_cols=268 Identities=19% Similarity=0.252 Sum_probs=154.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393 3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI 82 (580)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~ 82 (580)
++|+.+++.+..+.+..++.+...+...+..|+||||+||..|+.++|++|+.+....... .+..++.+|.+|+||||+
T Consensus 2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~-~Gadvn~~d~~G~TpLh~ 80 (277)
T d2fo1e1 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA-AGADVNAMDCDENTPLML 80 (277)
T ss_dssp CCCHHHHHHHSSSCCCSCCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHH-TCCCTTCCCTTSCCHHHH
T ss_pred ChHHHHHHhCCCHHHHHHHHhcCCCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHH-cCCCccccCCCCCeeecc
Confidence 4566555554444444555444444434456999999999999999998886543220000 011278889999999999
Q ss_pred HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC--CCcccccCCCCHH
Q 045393 83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSV--PSSYINKAYQTPL 160 (580)
Q Consensus 83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~g~tpL 160 (580)
|++.|+.+++++|+++|++++ .+|.+|.|||++|+..++.++++.+...+.. .....+..+.++.
T Consensus 81 A~~~g~~~iv~~Ll~~Gad~n-------------~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 147 (277)
T d2fo1e1 81 AVLARRRRLVAYLMKAGADPT-------------IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTAL 147 (277)
T ss_dssp HHHHTCHHHHHHHHHTTCCSC-------------CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHH
T ss_pred ccccccccccccccccccccc-------------cccccccccccchhhhcchhhhhhhhhcccccccccccccccchhH
Confidence 999999999999999988865 4678899999999999999988888765321 1123455556666
Q ss_pred HHHHHcCcHH---HHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCC
Q 045393 161 SIAIDARLND---IACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGN 237 (580)
Q Consensus 161 ~~A~~~~~~~---~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~ 237 (580)
+.+...+..+ .+..+.+....... ......+..+..|.||||.++..++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~g~t~L~~~~~~~~ 199 (277)
T d2fo1e1 148 MIVAHNEGRDQVASAKLLVEKGAKVDY----------------------------DGAARKDSEKYKGRTALHYAAQVSN 199 (277)
T ss_dssp HHHHHSCSTTHHHHHHHHHHHTCCSSC----------------------------CSGGGTSSSSCCCCCTHHHHHSSCC
T ss_pred HHHHhcccccccccccccccccccccc----------------------------cccccccccccCCCCcccccccccc
Confidence 6665544322 22222222110000 0001122334445555555555555
Q ss_pred hHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHh
Q 045393 238 VKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFIL 313 (580)
Q Consensus 238 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll 313 (580)
.+.++.++.......+.+|..|.||||+|++.|+.+++++|+++|++ ++.+|.+|+||||+|+++|+.+++++|+
T Consensus 200 ~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gad-in~~d~~G~T~L~~A~~~~~~~iv~lL~ 274 (277)
T d2fo1e1 200 MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFD 274 (277)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 55555444333333244444555555555555555555555555554 4445555555555555555555555444
No 11
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=7.7e-34 Score=272.92 Aligned_cols=258 Identities=19% Similarity=0.286 Sum_probs=196.7
Q ss_pred CchhhHHHh-cCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHH--------hcCcccccC
Q 045393 35 NAVLHMAVR-FRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIM--------KYLPAVNQV 105 (580)
Q Consensus 35 ~t~Lh~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll--------~~~~~~~~~ 105 (580)
.||||+++. .|+.++++.|.+.+.+ . ..+..|+||||+||..|+.++|+.|+ ++|++++
T Consensus 1 ~~p~~~~~~~~~~~~~~~~l~~~~~n---------~-~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn-- 68 (277)
T d2fo1e1 1 ESPIKLHTEAAGSYAITEPITRESVN---------I-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN-- 68 (277)
T ss_dssp CCCCHHHHHHHSSSCCCSCCSTTTTT---------T-CCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT--
T ss_pred CChHHHHHHhCCCHHHHHHHHhcCCC---------c-CCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCcc--
Confidence 489986655 5667777777776654 2 12246999999999999999998775 4566655
Q ss_pred CCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCC--Cc
Q 045393 106 GPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPE--SL 183 (580)
Q Consensus 106 ~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~--~~ 183 (580)
.+|.+|+||||+|++.|+.+++++|+++|++++ ..+..|.||++.|+..++.++.+.+...... ..
T Consensus 69 -----------~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~ 136 (277)
T d2fo1e1 69 -----------AMDCDENTPLMLAVLARRRRLVAYLMKAGADPT-IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI 136 (277)
T ss_dssp -----------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT
T ss_pred -----------ccCCCCCeeeccccccccccccccccccccccc-cccccccccccchhhhcchhhhhhhhhcccccccc
Confidence 578999999999999999999999999999877 5788899999999999999988888654321 11
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhc-------hhcccccC
Q 045393 184 NTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEES-------KRLAYKRD 256 (580)
Q Consensus 184 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~-------~~~~~~~~ 256 (580)
+..+. .+.++.+.+...+..+.. ..++.+.+.. .......+
T Consensus 137 ~~~~~-~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (277)
T d2fo1e1 137 EELDR-NGMTALMIVAHNEGRDQV-------------------------------ASAKLLVEKGAKVDYDGAARKDSEK 184 (277)
T ss_dssp SCCCT-TSCCHHHHHHHSCSTTHH-------------------------------HHHHHHHHHTCCSSCCSGGGTSSSS
T ss_pred ccccc-ccchhHHHHHhccccccc-------------------------------ccccccccccccccccccccccccc
Confidence 12222 444555554444332211 1111222111 11123456
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHH
Q 045393 257 CNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLA 336 (580)
Q Consensus 257 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A 336 (580)
..|.||||.++..++.+++++++.......+.+|..|+||||+|++.|+.+++++|+++| +++|.+|.+|+||||+|
T Consensus 185 ~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~g---adin~~d~~G~T~L~~A 261 (277)
T d2fo1e1 185 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG---ASVEAVDATDHTARQLA 261 (277)
T ss_dssp CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCSSSCCHHHHH
T ss_pred cCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCc---CCCCCcCCCCCCHHHHH
Confidence 789999999999999999998887766668899999999999999999999999999984 55999999999999999
Q ss_pred HhcCChhHHHHhhcC
Q 045393 337 AMGLHSDVVFTLSRH 351 (580)
Q Consensus 337 ~~~~~~~~~~~Ll~~ 351 (580)
+++|+.+++++|++.
T Consensus 262 ~~~~~~~iv~lL~~c 276 (277)
T d2fo1e1 262 QANNHHNIVDIFDRC 276 (277)
T ss_dssp HHTTCHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHh
Confidence 999999999999864
No 12
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.7e-32 Score=255.57 Aligned_cols=226 Identities=22% Similarity=0.262 Sum_probs=183.1
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc--cccc
Q 045393 77 ETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSS--YINK 154 (580)
Q Consensus 77 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~ 154 (580)
+||||.||+.|+.++++.|++..+.. +..+|.+|.||||+|+..|+.+++++|+++|++++. ..+.
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~~~~------------~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~ 68 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSKPSL------------LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD 68 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCGGG------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCT
T ss_pred CHhHHHHHHcCCHHHHHHHHHcCCCc------------ccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccc
Confidence 48999999999999999888865432 335788899999999999999999999988877642 2344
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHH
Q 045393 155 AYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAA 234 (580)
Q Consensus 155 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~ 234 (580)
.|.+|+++++..+..++++.++..+.. ......+..+.|+++.++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~l~~~~~ 114 (229)
T d1ixva_ 69 SGWTPFHIACSVGNLEVVKSLYDRPLK----------------------------------PDLNKITNQGVTCLHLAVG 114 (229)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHSSSSC----------------------------------CCTTCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccccccccccccccc----------------------------------ccccccccccccccccccc
Confidence 556666666666666665555544421 1133456678899999999
Q ss_pred cCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhc
Q 045393 235 SGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILR 314 (580)
Q Consensus 235 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 314 (580)
.++.++++.|++.+... ...+..|+||||+|+..|+.+++++|++.++..++.+|.+|+||||+|+.+|+.+++++|++
T Consensus 115 ~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~ 193 (229)
T d1ixva_ 115 KKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE 193 (229)
T ss_dssp TTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cchhhhhhhhhhhcccc-cccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHHHHHHHHH
Confidence 99999999999999877 66788999999999999999999999999987789999999999999999999999999996
Q ss_pred CcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcCcccc
Q 045393 315 SPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRHKSVN 355 (580)
Q Consensus 315 ~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~~~d 355 (580)
.. +++++.+|.+|+||||+|+. .+++++|++ +|+|
T Consensus 194 ~~--gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~-~g~d 228 (229)
T d1ixva_ 194 KY--GAEYDLVDNKGAKAEDVALN---EQVKKFFLN-NVVD 228 (229)
T ss_dssp HH--CCCSCCCCTTSCCTGGGCSC---HHHHHHHHH-HCCC
T ss_pred hc--CCCCCCcCCCCCCHHHHHhh---HHHHHHHHH-cCCC
Confidence 41 45699999999999999984 478899986 4776
No 13
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=100.00 E-value=3.7e-33 Score=270.25 Aligned_cols=236 Identities=22% Similarity=0.240 Sum_probs=159.1
Q ss_pred CCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchh
Q 045393 32 PGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVL 111 (580)
Q Consensus 32 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 111 (580)
.++.|+|+.||..|+.++|++|+++|++ ++.+|.+|.||||+|+..|+.+++++|++++.+..
T Consensus 38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Gad---------vn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~-------- 100 (291)
T d1s70b_ 38 FDDGAVFLAACSSGDTEEVLRLLERGAD---------INYANVDGLTALHQACIDDNVDMVKFLVENGANIN-------- 100 (291)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCC---------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT--------
T ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCC---------CCccCCCCCcHHHHHHhcCCceeeeeecccccccc--------
Confidence 3456899999999999999999999988 88899999999999999999999999999988754
Q ss_pred hhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCC
Q 045393 112 ESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDE 191 (580)
Q Consensus 112 ~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 191 (580)
..+..+.|||+.|+..++.++++.|+++|.... ..+..+.+|+++|+..+..+.++.++...........
T Consensus 101 -----~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~---- 170 (291)
T d1s70b_ 101 -----QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR---- 170 (291)
T ss_dssp -----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHH----
T ss_pred -----cccccccccccccccccccchhhcccccCcccc-cccccCccccccccccccchhcccccccccccccccc----
Confidence 357788999999999999999999999987665 5688889999999988888888888866432211000
Q ss_pred ccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCc
Q 045393 192 LTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGK 271 (580)
Q Consensus 192 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 271 (580)
.... ..........+..........+..|.||||.|+..|+.++++.|++.|+++ +.++..|.||||+|+..|+
T Consensus 171 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~di-n~~~~~g~TpL~~A~~~g~ 244 (291)
T d1s70b_ 171 ----KEEE-RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGK 244 (291)
T ss_dssp ----HHHH-HHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTC
T ss_pred ----cccc-ccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecc-cccccCCCCHHHHHHHcCC
Confidence 0000 000111111222222223334445555555555555555555555555544 4445555555555555555
Q ss_pred HHHHHHHHHhCCCccccccCCCCCHHHHHH
Q 045393 272 LKVLKLLINKYPDAIEIRNNSDRSILHVAA 301 (580)
Q Consensus 272 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 301 (580)
.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 245 ~~iv~lLl~~Gad-v~~~d~~G~TaL~~A~ 273 (291)
T d1s70b_ 245 EEACRILVENLCD-MEAVNKVGQTAFDVAD 273 (291)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTSCCTTTSCC
T ss_pred HHHHHHHHHCCCC-CCCcCCCCCCHHHHHH
Confidence 5555555555555 4555555555555554
No 14
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.98 E-value=6.1e-33 Score=268.72 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=182.6
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Q 045393 74 LMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYIN 153 (580)
Q Consensus 74 ~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 153 (580)
..+.|||+.||+.|+.++|++|+++|++++ .+|.+|.||||+|+..|+.+++++|++++.+.. ..+
T Consensus 38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn-------------~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~-~~~ 103 (291)
T d1s70b_ 38 FDDGAVFLAACSSGDTEEVLRLLERGADIN-------------YANVDGLTALHQACIDDNVDMVKFLVENGANIN-QPD 103 (291)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTT-------------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCC
T ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCCCC-------------ccCCCCCcHHHHHHhcCCceeeeeecccccccc-ccc
Confidence 456799999999999999999999999876 478999999999999999999999999998765 467
Q ss_pred cCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHH
Q 045393 154 KAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAA 233 (580)
Q Consensus 154 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~ 233 (580)
..+.+||+.++..++.++++.|++++. .....+. .+.++++.|+..+..+.+..++...+.........+..+.+
T Consensus 104 ~~~~~~L~~a~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~--- 178 (291)
T d1s70b_ 104 NEGWIPLHAAASCGYLDIAEYLISQGA-HVGAVNS-EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML--- 178 (291)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCT-TSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH---
T ss_pred ccccccccccccccccchhhcccccCc-ccccccc-cCccccccccccccchhcccccccccccccccccccccccc---
Confidence 788999999999999999999999874 3334444 78888888888888888888886554322211111111111
Q ss_pred HcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHh
Q 045393 234 ASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFIL 313 (580)
Q Consensus 234 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll 313 (580)
......+..... .....+..|.||||.|+..|+.++++.|+++|++ ++.+|..|+||||+|++.|+.+++++|+
T Consensus 179 ----~~~~~~~~~~~~-~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d-in~~~~~g~TpL~~A~~~g~~~iv~lLl 252 (291)
T d1s70b_ 179 ----RDARQWLNSGHI-NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILV 252 (291)
T ss_dssp ----HHHHHHHHHTCC-CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ----ccchhhhccccc-ccccccCCCCChhhHHHHcCChhhhcccccceec-ccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 112222222222 2244566788888888888888888888888887 7778888888888888888888888888
Q ss_pred cCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhh
Q 045393 314 RSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLS 349 (580)
Q Consensus 314 ~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll 349 (580)
++| +++|.+|.+|+||||+|++ +++++|.
T Consensus 253 ~~G---adv~~~d~~G~TaL~~A~e----~~~~~L~ 281 (291)
T d1s70b_ 253 ENL---CDMEAVNKVGQTAFDVADE----DILGYLE 281 (291)
T ss_dssp HTT---CCTTCCCTTSCCTTTSCCS----GGGHHHH
T ss_pred HCC---CCCCCcCCCCCCHHHHHHH----HHHHHHH
Confidence 874 4478888888888888864 4444443
No 15
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=1.6e-29 Score=233.92 Aligned_cols=222 Identities=24% Similarity=0.297 Sum_probs=146.6
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHh----cCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Q 045393 75 MDETALHIAARIGDRAIVSEIMK----YLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSS 150 (580)
Q Consensus 75 ~g~tpLh~Aa~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~ 150 (580)
+|+||||+||+.|+.++++.|++ .|++++ .+|.+|.||||+|+..|+.+++++|+++|++.+
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in-------------~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~- 67 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD-------------IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM- 67 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSC-------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-------------ccCCCCCccceehhccccccccccccccccccc-
Confidence 58999999999999999998885 555554 578899999999999999999999999998776
Q ss_pred ccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHH
Q 045393 151 YINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLH 230 (580)
Q Consensus 151 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~ 230 (580)
.....+.++++.|...++.++++............ .+.......++|+
T Consensus 68 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~ 115 (228)
T d1k1aa_ 68 ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD--------------------------------LEARNYDGLTALH 115 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC--------------------------------TTCCCTTSCCHHH
T ss_pred ccccccccccccccccccccchhhhhhcccccccc--------------------------------ccccccccccccc
Confidence 46777888999999988888888777655321110 1112223344555
Q ss_pred HHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHH
Q 045393 231 YAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVS 310 (580)
Q Consensus 231 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~ 310 (580)
.+.........+.|.....+........+.+|++.|+..+..++++.+++++.+ .+.+|..|+||||+|+.+|+.++++
T Consensus 116 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~~g~~~~v~ 194 (228)
T d1k1aa_ 116 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVR 194 (228)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHH
T ss_pred cccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccc-cccccccCcchHHHHHHcCCHHHHH
Confidence 555555555555555544444344444555666666666666666666665555 5555666666666666666666666
Q ss_pred HHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHH
Q 045393 311 FILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVF 346 (580)
Q Consensus 311 ~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~ 346 (580)
+|+++| +++|.+|.+|+||||+|+++|+.+++|
T Consensus 195 ~Ll~~G---ad~n~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 195 TLVRSG---ADSSLKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp HHHHTT---CCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred HHHHCC---CCCCCCCCCCCCHHHHHHhCCCccccC
Confidence 666553 335666666666666666666555553
No 16
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=6.8e-29 Score=229.60 Aligned_cols=222 Identities=21% Similarity=0.260 Sum_probs=173.7
Q ss_pred CCCchhhHHHhcCCHHHHHHHHh----hCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCc
Q 045393 33 GGNAVLHMAVRFRNQQVIREILR----QQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPA 108 (580)
Q Consensus 33 ~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~ 108 (580)
+|+||||+||..|+.++++.|++ .|.+ ++.+|..|+||||+|+..|+.++++.|+++|++.+
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~---------in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~----- 67 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE---------LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM----- 67 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC---------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCCCC---------CCccCCCCCccceehhccccccccccccccccccc-----
Confidence 69999999999999999999986 5555 88999999999999999999999999999998865
Q ss_pred chhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCC
Q 045393 109 PVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRL 188 (580)
Q Consensus 109 ~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 188 (580)
..+..|.++++.|...++.++++.+...........+ ....
T Consensus 68 --------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~ 108 (228)
T d1k1aa_ 68 --------ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE-------------------------------ARNY 108 (228)
T ss_dssp --------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT-------------------------------CCCT
T ss_pred --------ccccccccccccccccccccchhhhhhcccccccccc-------------------------------cccc
Confidence 4677899999999999999999988876543321111 0111
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHH
Q 045393 189 PDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAE 268 (580)
Q Consensus 189 ~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 268 (580)
...++++.+...........+...........+..+.++++.|+..+..++++.+++.+... +.+|..|.||||+|+.
T Consensus 109 -~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~-~~~d~~g~t~L~~A~~ 186 (228)
T d1k1aa_ 109 -DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASG 186 (228)
T ss_dssp -TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHH
T ss_pred -ccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhcccc-ccccccCcchHHHHHH
Confidence 34455555555555555555555555545555667778888888888888888888887766 5667788888888888
Q ss_pred cCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHH
Q 045393 269 NGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVS 310 (580)
Q Consensus 269 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~ 310 (580)
.|+.+++++|+++|++ ++.+|.+|+||||+|+++|+.|++|
T Consensus 187 ~g~~~~v~~Ll~~Gad-~n~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 187 RGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp HTCHHHHHHHHHTTCC-TTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhCCCccccC
Confidence 8888888888888888 7888888888888888888887764
No 17
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=1e-29 Score=235.08 Aligned_cols=198 Identities=18% Similarity=0.230 Sum_probs=160.6
Q ss_pred CCCcHHHHHHHhCCHHHH----HHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Q 045393 75 MDETALHIAARIGDRAIV----SEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSS 150 (580)
Q Consensus 75 ~g~tpLh~Aa~~g~~~~v----~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~ 150 (580)
+|+||||+|+..|+.+++ +.+...+++++ .+|.+|+||||+|+..|+.+++++|++.|++++
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in-------------~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~- 66 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLN-------------FQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE- 66 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCC-------------CCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcc-------------cCCCCCCcccccccccccccccccccccccccc-
Confidence 589999999999986554 44555565554 588999999999999999999999999999886
Q ss_pred ccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHH
Q 045393 151 YINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLH 230 (580)
Q Consensus 151 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~ 230 (580)
..|..|.+||+.++..++.++++.+++.+..... ..........|.||||
T Consensus 67 ~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~------------------------------~~~~~~~~~~~~t~l~ 116 (221)
T d1iknd_ 67 LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL------------------------------HSILKATNYNGHTCLH 116 (221)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSS------------------------------SCGGGCCCTTCCCHHH
T ss_pred ccccccccccccccccccccccchhhhhcccccc------------------------------cccccccccccchhhh
Confidence 5788999999999999999999999887642111 1113444556788999
Q ss_pred HHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHH
Q 045393 231 YAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVS 310 (580)
Q Consensus 231 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~ 310 (580)
.|+..++.+.+++|++.+.......+.+|.||||+|++.|+.+++++|+++|+| ++.+|.+|+||||+|+.+++.++++
T Consensus 117 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad-~~~~~~~G~tpl~~A~~~~~~~~~~ 195 (221)
T d1iknd_ 117 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQ 195 (221)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHH
T ss_pred HHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCc-ccccCCCCCCHHHHHHHCCCHHHHH
Confidence 999999999999999888877666667889999999999999999999999988 8888999999999999999999999
Q ss_pred HHhcCcc
Q 045393 311 FILRSPE 317 (580)
Q Consensus 311 ~Ll~~~~ 317 (580)
+|++...
T Consensus 196 ~l~~~~~ 202 (221)
T d1iknd_ 196 QLGQLTL 202 (221)
T ss_dssp HHHTTSC
T ss_pred HHHHcCC
Confidence 8888743
No 18
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.96 E-value=1.5e-28 Score=225.15 Aligned_cols=207 Identities=23% Similarity=0.310 Sum_probs=128.6
Q ss_pred HHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCc
Q 045393 89 RAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARL 168 (580)
Q Consensus 89 ~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~ 168 (580)
.|+|++|+++|++++. ..|.+|.||||+||+.|+.+++++|++.|++++ ..+..+.++++.++..++
T Consensus 2 ~~~v~~Ll~~g~din~------------~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n-~~~~~~~~~~~~~~~~~~ 68 (209)
T d1ot8a_ 2 AQVISDLLAQGAELNA------------TMDKTGETSLHLAARFARADAAKRLLDAGADAN-SQDNTGRTPLHAAVAADA 68 (209)
T ss_dssp HHHHHHHHHHHHHHHH------------HHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCcCc------------CcCCCCCCHHHHHHHcCCHHHHHHHHhhccccc-cccccccccccccccccc
Confidence 5789999999988752 257889999999999999999999999998876 567788888888888888
Q ss_pred HHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhc
Q 045393 169 NDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEES 248 (580)
Q Consensus 169 ~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~ 248 (580)
.................... .+.++.+.+.........+.|...+.. ++..+..|.|||+.++..+..++++.+++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~ 146 (209)
T d1ot8a_ 69 MGVFQILLRNRATNLNARMH-DGTTPLILAARLAIEGMVEDLITADAD-INAADNSGKTALHWAAAVNNTEAVNILLMHH 146 (209)
T ss_dssp HHHHHHHHTCTTCCTTCCCT-TCCCHHHHHHHTTCTTHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred cccccccccccccccccccc-cccccccccccccchhhhhhhhhhccc-ccccCCCCCCcchhhcccCcceeeeeecccc
Confidence 77766666554333222222 455555555555555555544444332 4444555555555555555555555555555
Q ss_pred hhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHH
Q 045393 249 KRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFI 312 (580)
Q Consensus 249 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~L 312 (580)
.+. +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+++|+.++|++|
T Consensus 147 ~~~-~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 147 ANR-DAQDDKDETPLFLAAREGSYEASKALLDNFAN-REITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp CCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccc-cccccccccccchhccccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 444 34444555555555555555555555555555 445555555555555555555555543
No 19
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=4.9e-29 Score=230.49 Aligned_cols=199 Identities=20% Similarity=0.289 Sum_probs=147.5
Q ss_pred CCCchhhHHHhcCCHHH----HHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCc
Q 045393 33 GGNAVLHMAVRFRNQQV----IREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPA 108 (580)
Q Consensus 33 ~g~t~Lh~A~~~g~~~~----v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~ 108 (580)
+|+||||+|+..|+.++ ++++...+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~---------in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~----- 66 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAF---------LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE----- 66 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCC---------CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-----
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCC---------cccCCCCCCcccccccccccccccccccccccccc-----
Confidence 59999999999999655 4455556665 88999999999999999999999999999999876
Q ss_pred chhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCC
Q 045393 109 PVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRL 188 (580)
Q Consensus 109 ~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 188 (580)
.+|..|.||||+|+..++.++++.|++.+........ ......
T Consensus 67 --------~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------------------------~~~~~~ 109 (221)
T d1iknd_ 67 --------LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSI-----------------------------LKATNY 109 (221)
T ss_dssp --------CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCG-----------------------------GGCCCT
T ss_pred --------ccccccccccccccccccccccchhhhhccccccccc-----------------------------cccccc
Confidence 4788999999999999999999999998765432110 011111
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHH
Q 045393 189 PDELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAE 268 (580)
Q Consensus 189 ~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 268 (580)
.|.+|+|.|+..++.+.++.++..+.......+.+|.||||.|+..|+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 110 -~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~-~~~~~~G~tpl~~A~~ 187 (221)
T d1iknd_ 110 -NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTYQGYSPYQLTWG 187 (221)
T ss_dssp -TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCTTCCCGGGGCTT
T ss_pred -ccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcc-cccCCCCCCHHHHHHH
Confidence 45566666666666666666666655544444566777777777777777777777777775 6667777777777777
Q ss_pred cCcHHHHHHHHHhCCC
Q 045393 269 NGKLKVLKLLINKYPD 284 (580)
Q Consensus 269 ~g~~~~v~~Ll~~~~~ 284 (580)
.++.+++++|++...+
T Consensus 188 ~~~~~~~~~l~~~~~~ 203 (221)
T d1iknd_ 188 RPSTRIQQQLGQLTLE 203 (221)
T ss_dssp SSCHHHHHHHHTTSCG
T ss_pred CCCHHHHHHHHHcCCc
Confidence 7777777777776654
No 20
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.95 E-value=4.9e-28 Score=221.70 Aligned_cols=207 Identities=21% Similarity=0.267 Sum_probs=187.1
Q ss_pred HHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhC
Q 045393 135 KRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTN 214 (580)
Q Consensus 135 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~ 214 (580)
.|+|++|+++|++++...|.+|.||||+|+..|+.+++++|++.++. ++..+. .+.++++.++..++...........
T Consensus 2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~-~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (209)
T d1ot8a_ 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGAD-ANSQDN-TGRTPLHAAVAADAMGVFQILLRNR 79 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT-TSCCHHHHHHHTTCHHHHHHHHTCT
T ss_pred HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhccc-cccccc-ccccccccccccccccccccccccc
Confidence 58999999999998766789999999999999999999999999854 445555 8899999999999998887777776
Q ss_pred CccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCC
Q 045393 215 KELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDR 294 (580)
Q Consensus 215 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 294 (580)
..........|.++.+.+.........+.|.+.+.+. +.++..|.|||+.++..+..++++.+++.+.+ ++.+|..|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~d~~g~ 157 (209)
T d1ot8a_ 80 ATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI-NAADNSGKTALHWAAAVNNTEAVNILLMHHAN-RDAQDDKDE 157 (209)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccc-cccCCCCCCcchhhcccCcceeeeeecccccc-ccccccccc
Confidence 6666667778999999999999999999999998877 67788999999999999999999999999998 899999999
Q ss_pred CHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHh
Q 045393 295 SILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTL 348 (580)
Q Consensus 295 t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~L 348 (580)
||||+|+.+|+.+++++|+++| +++|.+|.+|+||||+|+++|+.+++++|
T Consensus 158 TpL~~A~~~g~~~~v~~Ll~~g---ad~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 158 TPLFLAAREGSYEASKALLDNF---ANREITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cccchhccccHHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 9999999999999999999984 55999999999999999999999999976
No 21
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.94 E-value=1.8e-30 Score=256.39 Aligned_cols=130 Identities=15% Similarity=0.198 Sum_probs=82.5
Q ss_pred cCCCCCchhhHHHhcCCHHHHHH---HHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCC
Q 045393 30 SSPGGNAVLHMAVRFRNQQVIRE---ILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVG 106 (580)
Q Consensus 30 ~~~~g~t~Lh~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 106 (580)
++..|.||||+||.+|+.+++++ |++.|++ ++.+|..|+||||+||++|+.++|++|+++|++++..
T Consensus 86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~---------in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~- 155 (346)
T d2ajaa1 86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEI---------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMA- 155 (346)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS---------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHH-
T ss_pred ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCc---------ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc-
Confidence 45567777777777777666554 5666666 6667777777777777777777777777777665421
Q ss_pred CcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc--ccccCCCCHHHHHHHcCcHHHHHHHHhcC
Q 045393 107 PAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSS--YINKAYQTPLSIAIDARLNDIACFIIDKS 179 (580)
Q Consensus 107 ~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 179 (580)
..+.+|.||||+|+++|+.++|++|++.|+.... ..+.++.+|++.|+.+|+.+++++|++.+
T Consensus 156 ----------~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~g 220 (346)
T d2ajaa1 156 ----------MIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 220 (346)
T ss_dssp ----------HHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred ----------ccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCC
Confidence 1234567777777777777777777777664421 12334456666666667777777776654
No 22
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.94 E-value=7.3e-30 Score=252.04 Aligned_cols=273 Identities=12% Similarity=0.057 Sum_probs=195.1
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHH---HHHcCCCCCcccc
Q 045393 77 ETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRI---LVEKDSVPSSYIN 153 (580)
Q Consensus 77 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~---Ll~~~~~~~~~~~ 153 (580)
.++++.+...+..++.+.+...+.+.+... ......+..++..|.||||+|+++|+.+++++ |++.|++++ ..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in-~~~ 123 (346)
T d2ajaa1 47 AIHIFLPGTKNMEQVRQLLCLYYAHYNRNA--KQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVK-VIQ 123 (346)
T ss_dssp HHHHCCCCSSHHHHHHHHHHHHHHHTTTTC--TTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC---C
T ss_pred HHHHHHHhhccHHHHHHHHHHcchhhccch--hhhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCccc-ccC
Confidence 344444445555677777777665544321 12234456788899999999999999887766 788898877 578
Q ss_pred cCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHHHHHHHcCCHHHHHHHHhhCCcc--ccccCCCCChHHHH
Q 045393 154 KAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLIHFVVMRQNYDIMVKILGTNKEL--IDRLDWHQRNPLHY 231 (580)
Q Consensus 154 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~--~~~~d~~g~t~L~~ 231 (580)
..|.||||+|+.+|+.+++++|++.+++.........|.||||.|+.+|+.+++++|++.++.. .+..+.+|.||++.
T Consensus 124 ~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~ 203 (346)
T d2ajaa1 124 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWA 203 (346)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhH
Confidence 8999999999999999999999999864322211126899999999999999999999988653 33445667788899
Q ss_pred HHHcCChHHHHHHHHhchhcccc------cCCCCCcHHHHHHHcCcHHHHHHHHHhCCCc-ccccc-------CCCCCHH
Q 045393 232 AAASGNVKMAQRLLEESKRLAYK------RDCNGETPLHLAAENGKLKVLKLLINKYPDA-IEIRN-------NSDRSIL 297 (580)
Q Consensus 232 A~~~g~~~~v~~Ll~~~~~~~~~------~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~-~~~~d-------~~g~t~L 297 (580)
|+..|+.+++++|++.|++.... ....+.++++.+...+..+....+.....+. .+..+ ..+.+++
T Consensus 204 A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l 283 (346)
T d2ajaa1 204 AVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNL 283 (346)
T ss_dssp HSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHH
T ss_pred HhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhhHH
Confidence 99999999999999998765321 1223345666665555555444443332221 11111 1234788
Q ss_pred HHHHHcCCHHHHHHHhcCcchhhh--cccccCCCCcHHHHHHhcCChhHHHHhhcCc
Q 045393 298 HVAAKHGNWNIVSFILRSPEMENL--INLVDRNGNTPLHLAAMGLHSDVVFTLSRHK 352 (580)
Q Consensus 298 h~A~~~~~~~iv~~Ll~~~~~~~~--~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~~ 352 (580)
+.|+..++.+++++|++.+..... .+..+.+|+||||+|++.|+.+++++||...
T Consensus 284 ~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~p 340 (346)
T d2ajaa1 284 IRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 340 (346)
T ss_dssp HHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred HHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCCC
Confidence 999999999999999998654332 3455678999999999999999999999753
No 23
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.1e-25 Score=193.64 Aligned_cols=152 Identities=26% Similarity=0.349 Sum_probs=139.9
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcH
Q 045393 193 TLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKL 272 (580)
Q Consensus 193 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 272 (580)
..|+.|+..|+.++++.|++.++..++..|..|+||||+|+ .|+.+++++|++++.++ +..+..|.+|++.++..++.
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~-~~~~~~~~~~l~~~~~~~~~ 81 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccccccc-cccccccccccccccccccc
Confidence 45999999999999999999887779999999999999886 58899999999999887 67788999999999999999
Q ss_pred HHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcC
Q 045393 273 KVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRH 351 (580)
Q Consensus 273 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~ 351 (580)
++++.+++++++ ++.+|..|+||||+|++.|+.+++++|++ +.+++.+|.+|+||||+|+..|+.+++++|+++
T Consensus 82 ~~~~~~l~~~~~-~n~~~~~~~t~L~~A~~~~~~~i~~~L~~----~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 82 DTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAA----ESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHT----TSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cccccccccccc-cccccCCCCeeeccccccccccccccccc----cccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 999999999998 88999999999999999999999999884 345899999999999999999999999999865
No 24
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.3e-24 Score=188.65 Aligned_cols=154 Identities=23% Similarity=0.276 Sum_probs=107.8
Q ss_pred HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393 3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI 82 (580)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~ 82 (580)
.+||.||..|++++++.|+++|...+..|.+|.||||+|+ .|+.|++++|+++|++ ++.++..|.+||+.
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~---------~~~~~~~~~~~l~~ 72 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGAN---------PDLKDRTGFAVIHD 72 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCC---------TTCCCTTSCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccc---------cccccccCcccccc
Confidence 3577777777777777777776666666777777777664 5677777777777766 66667777777777
Q ss_pred HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHH
Q 045393 83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSI 162 (580)
Q Consensus 83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~ 162 (580)
++..++.+.++.|++.+.+.+ ..|..|.+|||+|+..++.+++++|+++++......|..|+||||+
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~-------------~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~ 139 (156)
T d1ihba_ 73 AARAGFLDTLQTLLEFQADVN-------------IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDL 139 (156)
T ss_dssp HHHHTCHHHHHHHHHTTCCTT-------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred ccccccccccccccccccccc-------------ccccccccccccccccccccccccccccccccccccCCCCCCHHHH
Confidence 777777777777777666543 3566677777777777777777777777765445566777777777
Q ss_pred HHHcCcHHHHHHHHhcC
Q 045393 163 AIDARLNDIACFIIDKS 179 (580)
Q Consensus 163 A~~~~~~~~v~~Ll~~~ 179 (580)
|+..++.+++++|+++|
T Consensus 140 A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 140 ARLYGRNEVVSLMQANG 156 (156)
T ss_dssp HHHTTCHHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHhcC
Confidence 77777777777777654
No 25
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=2.8e-24 Score=186.40 Aligned_cols=151 Identities=21% Similarity=0.243 Sum_probs=132.4
Q ss_pred HHHHHHHHcCCHHHHHHHhhh-cCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHH
Q 045393 3 QELLEVLRHGDEYKIKQLALR-QDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALH 81 (580)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh 81 (580)
..|+.||..||.+.+++|+++ +...+..|..|+||||+|+. |+.+++++|++++.+ ++..+..|.+|++
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~---------~~~~~~~~~~~l~ 73 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGAS---------PNVQDTSGTSPVH 73 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCT-TCHHHHHHHHHTTCC---------TTCCCTTSCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCcccccccc-ccccccccccccccc---------ccccccccccccc
Confidence 469999999999999999986 45566688999999998874 889999999999888 7888889999999
Q ss_pred HHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHH
Q 045393 82 IAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLS 161 (580)
Q Consensus 82 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~ 161 (580)
.++..++.++++.+++++++++ .+|.+|.||||+|++.|+.+++++|+ .|++++ ..|..|+||||
T Consensus 74 ~~~~~~~~~~~~~~l~~~~~~n-------------~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~-~~d~~G~TpL~ 138 (156)
T d1bd8a_ 74 DAARTGFLDTLKVLVEHGADVN-------------VPDGTGALPIHLAVQEGHTAVVSFLA-AESDLH-RRDARGLTPLE 138 (156)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSC-------------CCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTT-CCCTTSCCHHH
T ss_pred cccccccccccccccccccccc-------------cccCCCCeeecccccccccccccccc-cccccc-ccCCCCCCHHH
Confidence 9999999999999999988765 47888999999999999999999887 566665 57889999999
Q ss_pred HHHHcCcHHHHHHHHhc
Q 045393 162 IAIDARLNDIACFIIDK 178 (580)
Q Consensus 162 ~A~~~~~~~~v~~Ll~~ 178 (580)
+|+..|+.+++++|+++
T Consensus 139 ~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 139 LALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHSCCHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHhh
Confidence 99999999999999875
No 26
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=3e-24 Score=186.35 Aligned_cols=154 Identities=14% Similarity=0.187 Sum_probs=94.3
Q ss_pred chhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhh
Q 045393 36 AVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLF 115 (580)
Q Consensus 36 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l 115 (580)
++||+||..|+.++|++|+++|++ ++.+|..|.||||+|+ .|+.+++++|+++|++++
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d---------~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~------------ 60 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVN---------VNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPD------------ 60 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCC---------TTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTT------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC---------cCccCCcccccccccc-cccccccccccccccccc------------
Confidence 566777777777777777776666 5666666777776554 566677777776666543
Q ss_pred hccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcCCCCCCCCccHH
Q 045393 116 RMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIIDKSPESLNTTRLPDELTLI 195 (580)
Q Consensus 116 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~t~L 195 (580)
.++..|.+|++.++..++.+.++.|++.+.+.. ..+..|.+|++.|+..++.+++++|++++
T Consensus 61 -~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~---------------- 122 (156)
T d1ihba_ 61 -LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN-IEDNEGNLPLHLAAKEGHLRVVEFLVKHT---------------- 122 (156)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHS----------------
T ss_pred -cccccCccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc----------------
Confidence 355666666666666666666666666665543 34455555555555555555555555554
Q ss_pred HHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhc
Q 045393 196 HFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEES 248 (580)
Q Consensus 196 ~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~ 248 (580)
+.+.+.+|.+|+||||+|++.++.+++++|+++|
T Consensus 123 -------------------~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 123 -------------------ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156 (156)
T ss_dssp -------------------CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred -------------------cccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 4334455555566666666666666666665554
No 27
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.91 E-value=9.6e-24 Score=182.42 Aligned_cols=150 Identities=19% Similarity=0.288 Sum_probs=119.6
Q ss_pred ccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCc
Q 045393 192 LTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGK 271 (580)
Q Consensus 192 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 271 (580)
.|||+.|+..|+.++++.|+++++. .+ .|..|+||||+|+..++.++++.++...... ...+..+.++++.++...+
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL~~ga~-~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILMANGAP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTC
T ss_pred CHHHHHHHHCCCHHHHHHHHHcCCC-cc-cccCCCccccccccccccccccccccccccc-ccccccccccccccccccc
Confidence 3778888888888888888887764 33 5778888888888888888888888777655 4456667788888888888
Q ss_pred HHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHh
Q 045393 272 LKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTL 348 (580)
Q Consensus 272 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~L 348 (580)
.++++++..++.+ .+.+|.+|+||||+|+..|+.+++++|++.| +++|.+|.+|.||||+|+.+|+.+++++|
T Consensus 80 ~~~~~~l~~~~~~-~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~g---ad~~~~d~~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 80 ANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYG---ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ceeeecccccCCc-cccccccCchHHHhhhhcchhheeeeccccc---cCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence 8888888888887 6778888888888888888888888888874 45788888888888888888888888765
No 28
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90 E-value=6.7e-23 Score=177.02 Aligned_cols=149 Identities=27% Similarity=0.361 Sum_probs=106.3
Q ss_pred HHHHHHHHcCCHHHHHHHhhhcCcccccCCCCCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHH
Q 045393 3 QELLEVLRHGDEYKIKQLALRQDIFSTSSPGGNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHI 82 (580)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~ 82 (580)
++|+.|++.|+.++++.|++++.... .+..|.||||+|+..++.++++.++..... ....+..+.++++.
T Consensus 4 t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 73 (153)
T d1awcb_ 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS---------RDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC---------TTCCCTTCCCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCcccccccccccccccccccccccc---------cccccccccccccc
Confidence 56777777777777777777765444 567777777777777777777777776655 44556666777777
Q ss_pred HHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHH
Q 045393 83 AARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSI 162 (580)
Q Consensus 83 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~ 162 (580)
++...+.++++++.+++.+.+ .+|.+|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+
T Consensus 74 ~~~~~~~~~~~~l~~~~~~~~-------------~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~-~~d~~g~Tpl~~ 139 (153)
T d1awcb_ 74 AASEGHANIVEVLLKHGADVN-------------AKDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKTAFDI 139 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTT-------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHH
T ss_pred ccccccceeeecccccCCccc-------------cccccCchHHHhhhhcchhheeeeccccccCCc-ccCCCCCCHHHH
Confidence 777777777777777766543 356677777777777777777777777777665 457777777777
Q ss_pred HHHcCcHHHHHHH
Q 045393 163 AIDARLNDIACFI 175 (580)
Q Consensus 163 A~~~~~~~~v~~L 175 (580)
|+.+|+.+++++|
T Consensus 140 A~~~g~~eiv~lL 152 (153)
T d1awcb_ 140 SIDNGNEDLAEIL 152 (153)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHhC
Confidence 7777777777654
No 29
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=4.8e-24 Score=206.20 Aligned_cols=180 Identities=17% Similarity=0.079 Sum_probs=112.9
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCh---HHHHHHHHhchhcccccCCCCCcHHHHH
Q 045393 190 DELTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNV---KMAQRLLEESKRLAYKRDCNGETPLHLA 266 (580)
Q Consensus 190 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~---~~v~~Ll~~~~~~~~~~~~~g~tpL~~A 266 (580)
.|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||.|+..++. +.++.+++........+|..|+||||.+
T Consensus 106 ~G~T~LH~Aa~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~g~t~lh~~ 184 (301)
T d1sw6a_ 106 HGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHI 184 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccccCCHHHHH
Confidence 677777777777777777777776654 677777777777777765541 2222333322222345567777888877
Q ss_pred HHcCc------------HHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHH
Q 045393 267 AENGK------------LKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLH 334 (580)
Q Consensus 267 ~~~g~------------~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh 334 (580)
+..+. ..+++++.+.+..........+.++++.+........+..+.........+|.+|.+|+||||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh 264 (301)
T d1sw6a_ 185 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLN 264 (301)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHH
T ss_pred HHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHH
Confidence 65432 124455666666555666677777777777666655555433221223458999999999999
Q ss_pred HHHhcCChhHHHHhhcCcccccccccccCCCCCHHHHHH
Q 045393 335 LAAMGLHSDVVFTLSRHKSVNIRAKNHSARSNTALEIAE 373 (580)
Q Consensus 335 ~A~~~~~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a~ 373 (580)
+|++.|+.+++++|+++ |+|++++|+ .|+||||+|.
T Consensus 265 ~A~~~g~~~iv~~Ll~~-GAd~~~~n~--~G~Tpl~~A~ 300 (301)
T d1sw6a_ 265 IAARLGNISIVDALLDY-GADPFIANK--SGLRPVDFGA 300 (301)
T ss_dssp HHHHHCCHHHHHHHHHT-TCCTTCCCT--TSCCGGGGTC
T ss_pred HHHHcCCHHHHHHHHHC-CCCCCCCCC--CCCCHHHHcC
Confidence 99999999999999975 999999999 9999999873
No 30
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.88 E-value=3.6e-23 Score=199.93 Aligned_cols=185 Identities=19% Similarity=0.224 Sum_probs=103.8
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcH-------HHHHHHHhcCCCCcCCCCCCCC
Q 045393 119 DIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLN-------DIACFIIDKSPESLNTTRLPDE 191 (580)
Q Consensus 119 d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~-------~~v~~Ll~~~~~~~~~~~~~~~ 191 (580)
|.+|+||||+|+..|+.++|++|+++|++++ ..|..|+||||.|+..++. ++++++.+ .....+. .|
T Consensus 104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~----~~~~~d~-~g 177 (301)
T d1sw6a_ 104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP----CLILEDS-MN 177 (301)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG----GGGEECT-TC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-cCCcccccHHHHhhhcccchhhhhHHHHHHHHhh----hhhhccc-cc
Confidence 7788889999888888888898888888877 5688888888888876542 22222221 1122222 45
Q ss_pred ccHHHHHHHcCCHHHHHHHHhhCCccccccCCCCChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCc
Q 045393 192 LTLIHFVVMRQNYDIMVKILGTNKELIDRLDWHQRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGK 271 (580)
Q Consensus 192 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 271 (580)
+||||.++..+..+. ...+++.....+++.+.+.+..........+.++++.+.....
T Consensus 178 ~t~lh~~~~~~~~~~----------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T d1sw6a_ 178 RTILHHIIITSGMTG----------------------CSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 235 (301)
T ss_dssp CCHHHHHHHHHTSTT----------------------CHHHHHHHHHHHHHHHHHGGGCCEEEC----------------
T ss_pred CCHHHHHHHHhCccc----------------------cHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcch
Confidence 555555543221100 0000000011244555666555444444455555555544433
Q ss_pred HHHHH-----HHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHH
Q 045393 272 LKVLK-----LLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAA 337 (580)
Q Consensus 272 ~~~v~-----~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~ 337 (580)
...+. .++... ++.+|.+|+||||+|+++|+.+++++|++. +++++.+|++|.||||+|+
T Consensus 236 ~~~~~~~~~~~~~~~~---in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~---GAd~~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 236 DSILENLDLKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLDY---GADPFIANKSGLRPVDFGA 300 (301)
T ss_dssp CHHHHHCSHHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHT---TCCTTCCCTTSCCGGGGTC
T ss_pred HHHHHHHhhHHHHhcC---ccCCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHHHcC
Confidence 33322 222222 567788888888888888888888888887 4448888888888888875
No 31
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=4.1e-23 Score=171.14 Aligned_cols=120 Identities=24% Similarity=0.285 Sum_probs=93.3
Q ss_pred CChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCC-CHHHHHHHc
Q 045393 225 QRNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDR-SILHVAAKH 303 (580)
Q Consensus 225 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~ 303 (580)
+.++||.|+..|+.+++++|+++|+++ +.++..|.||+|.|+ .|+.+++++|+++|++ ++.+|..|. ||||+|+++
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~-n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~L~~A~~~ 79 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAARE 79 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHHHH
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCcc-ccccccccccccccc-cccccccccccccccc-ccccccccccccccccccc
Confidence 457788888888888888888888776 667778888887654 6788888888888887 677776665 588888888
Q ss_pred CCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhc
Q 045393 304 GNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSR 350 (580)
Q Consensus 304 ~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~ 350 (580)
|+.+++++|+++| .+++.+|.+|+||||+|+++|+.+++++|+.
T Consensus 80 g~~~~v~~Ll~~g---a~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 80 GFLDTLVVLHRAG---ARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp TCHHHHHHHHHHT---CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ccccccccccccc---cccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 8888888888773 4478888888888888888888888888764
No 32
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.87 E-value=1.5e-23 Score=171.71 Aligned_cols=105 Identities=30% Similarity=0.295 Sum_probs=51.4
Q ss_pred cHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcC
Q 045393 261 TPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGL 340 (580)
Q Consensus 261 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~ 340 (580)
|||++|+++|+.+++++|+++|++ ++.+|..|+||||+|+.+|+.+++++|++.+ .++|.+|.+|+||||+|+.+|
T Consensus 4 tpL~~A~~~g~~~~v~~Ll~~g~d-~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g---~din~~d~~g~tpLh~A~~~~ 79 (118)
T d1myoa_ 4 KEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKG---ADINAPDKHHITPLLSAVYEG 79 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTTCC-CCCCSSSSCCTTHHHHHHSTTTHHHHHHHSS---CTTTCCSSSCSCHHHHHHTTT
T ss_pred hHHHHHHHCCCHHHHHHHHHhhhc-ccccccccccccccccccccccccccccccc---ceeeecccccccchhhhhhcC
Confidence 445555555555555555554444 4444445555555555555555555555442 224444555555555555555
Q ss_pred ChhHHHHhhcCcccccccccccCCCCCHHHHH
Q 045393 341 HSDVVFTLSRHKSVNIRAKNHSARSNTALEIA 372 (580)
Q Consensus 341 ~~~~~~~Ll~~~~~d~~~~n~~~~g~t~l~~a 372 (580)
+.+++++|+++ |+|++.+|. +|+|||++|
T Consensus 80 ~~~~v~~Ll~~-Gad~~~~d~--~G~t~l~~a 108 (118)
T d1myoa_ 80 HVSCVKLLLSK-GADKTVKGP--DGLTALEAT 108 (118)
T ss_dssp CCHHHHHHHTT-CCCSSSSSS--STCCCCCTC
T ss_pred chhhhhhhhcc-cccceeeCC--CCCCHHHHH
Confidence 55555554432 445555544 555555444
No 33
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.4e-22 Score=167.90 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=108.2
Q ss_pred CCchhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhh
Q 045393 34 GNAVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLES 113 (580)
Q Consensus 34 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 113 (580)
+.++||+|+..|+.++|++|+++|++ ++.+|..|.||||.|+ .|+.+++++|+++|++++
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad---------~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~---------- 62 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGAN---------PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN---------- 62 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCC---------TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC----------
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCc---------cccccccccccccccc-cccccccccccccccccc----------
Confidence 56899999999999999999999988 8899999999999775 799999999999999876
Q ss_pred hhhccCCCCC-cHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHh
Q 045393 114 LFRMTDIEGN-TPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIAIDARLNDIACFIID 177 (580)
Q Consensus 114 ~l~~~d~~g~-tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 177 (580)
.++..|. ||||+|++.|+.+++++|+++|++++ ..|..|+||||+|+.+|+.+++++|++
T Consensus 63 ---~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 63 ---CADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp ---CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ---cccccccccccccccccccccccccccccccccc-cccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3555554 79999999999999999999999887 578999999999999999999999875
No 34
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.87 E-value=5.4e-23 Score=168.41 Aligned_cols=115 Identities=21% Similarity=0.319 Sum_probs=105.8
Q ss_pred ChHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCC
Q 045393 226 RNPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGN 305 (580)
Q Consensus 226 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 305 (580)
.|||++|++.|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+.+|+
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~-n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~d-in~~d~~g~tpLh~A~~~~~ 80 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEGH 80 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCCC-CCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCT-TTCCSSSCSCHHHHHHTTTC
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhcc-ccccccccccccccccccccccccccccccce-eeecccccccchhhhhhcCc
Confidence 48999999999999999999999987 78899999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhh
Q 045393 306 WNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLS 349 (580)
Q Consensus 306 ~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll 349 (580)
.+++++|+++| ++++.+|.+|+||||+|. .+.++.||
T Consensus 81 ~~~v~~Ll~~G---ad~~~~d~~G~t~l~~a~----~~~i~~LL 117 (118)
T d1myoa_ 81 VSCVKLLLSKG---ADKTVKGPDGLTALEATD----NQAIKALL 117 (118)
T ss_dssp CHHHHHHHTTC---CCSSSSSSSTCCCCCTCS----STTTGGGG
T ss_pred hhhhhhhhccc---ccceeeCCCCCCHHHHHh----HHHHHHhc
Confidence 99999999994 559999999999999983 24566665
No 35
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=3.4e-22 Score=166.67 Aligned_cols=122 Identities=24% Similarity=0.245 Sum_probs=110.4
Q ss_pred chhhHHHhcCCHHHHHHHHhhCchhHHhhhhhhcccccCCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhh
Q 045393 36 AVLHMAVRFRNQQVIREILRQQDFIALRLHYSLLRQKNLMDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLF 115 (580)
Q Consensus 36 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l 115 (580)
++|+.||..|+.++|++|+++|++ ++.+|.+|+||||+|+..|+.+++++|+++|++++
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d---------~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~------------ 61 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDD---------PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN------------ 61 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSS---------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT------------
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCC---------ccccccccccccccccccccccccccccccccccc------------
Confidence 679999999999999999999998 89999999999999999999999999999998865
Q ss_pred hccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccccCCCCHHHHH--HHcCcHHHHHHHHhcC
Q 045393 116 RMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPSSYINKAYQTPLSIA--IDARLNDIACFIIDKS 179 (580)
Q Consensus 116 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A--~~~~~~~~v~~Ll~~~ 179 (580)
.+|.+|+||||+|+.+|+.+++++|+++|++++...+..++||++++ ...|+.+++++|++..
T Consensus 62 -~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~ 126 (130)
T d1ycsb1 62 -AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ 126 (130)
T ss_dssp -CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred -cccccCcccccccchhhHHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhHH
Confidence 57899999999999999999999999999998866566788887765 5678899999998753
No 36
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2e-21 Score=161.95 Aligned_cols=119 Identities=18% Similarity=0.185 Sum_probs=100.4
Q ss_pred hHHHHHHHcCChHHHHHHHHhchhcccccCCCCCcHHHHHHHcCcHHHHHHHHHhCCCccccccCCCCCHHHHHHHcCCH
Q 045393 227 NPLHYAAASGNVKMAQRLLEESKRLAYKRDCNGETPLHLAAENGKLKVLKLLINKYPDAIEIRNNSDRSILHVAAKHGNW 306 (580)
Q Consensus 227 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~ 306 (580)
++|+.|+..|+.++++.|+++|+++ +.+|.+|+||||+|+..|+.+++++|++++++ ++.+|.+|+||||+|+.+|+.
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~-n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~-~~~~d~~g~tpLh~A~~~g~~ 80 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNV 80 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCc-cccccccccccccccccccccccccccccccc-cccccccCcccccccchhhHH
Confidence 5788899999999999999998887 77888899999999999999999999999888 788899999999999999999
Q ss_pred HHHHHHhcCcchhhhcccccC-CCCcHHHHH--HhcCChhHHHHhhc
Q 045393 307 NIVSFILRSPEMENLINLVDR-NGNTPLHLA--AMGLHSDVVFTLSR 350 (580)
Q Consensus 307 ~iv~~Ll~~~~~~~~~n~~d~-~G~T~Lh~A--~~~~~~~~~~~Ll~ 350 (580)
+++++|+++| ++++.++. +|+||++++ ...|+.+++++|+.
T Consensus 81 ~~v~~Ll~~g---a~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~ 124 (130)
T d1ycsb1 81 QVCKFLVESG---AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 124 (130)
T ss_dssp HHHHHHHHTT---CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred HHHHHHHHcC---CCcccccCCCCCCHHHHHHHHHcChHHHHHHHHh
Confidence 9999999884 44777664 577877665 46688899988874
No 37
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1.5e-20 Score=160.77 Aligned_cols=124 Identities=18% Similarity=0.228 Sum_probs=99.2
Q ss_pred HHHHHHHcCCHHHHHHHhhhcCccc------ccCCCCCchhhHHHhc---CCHHHHHHHHhhCchhHHhhhhhhcccccC
Q 045393 4 ELLEVLRHGDEYKIKQLALRQDIFS------TSSPGGNAVLHMAVRF---RNQQVIREILRQQDFIALRLHYSLLRQKNL 74 (580)
Q Consensus 4 ~L~~A~~~g~~~~~~~ll~~~~~~~------~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 74 (580)
.|+.|++.+|+..+..++..+.... ..+..|+||||+|++. |+.+++++|++.|++ ++.+|.
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad---------in~~d~ 79 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---------LDKQTG 79 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC---------TTCCCT
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC---------hhhhhh
Confidence 5778889999999988887763222 2356788888888864 678888888888887 788888
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCcchhhhhhhccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q 045393 75 MDETALHIAARIGDRAIVSEIMKYLPAVNQVGPAPVLESLFRMTDIEGNTPLHNAVTNQHKRVIRILVEKDSVPS 149 (580)
Q Consensus 75 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~l~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~ 149 (580)
.|+||||+|+..|+.+++++|+++|++++ .+|.+|.||||+|++.|+.+++++|++.++...
T Consensus 80 ~g~TpLh~A~~~~~~~~v~~Ll~~gad~~-------------~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~ 141 (154)
T d1dcqa1 80 KGSTALHYCCLTDNAECLKLLLRGKASIE-------------IANESGETPLDIAKRLKHEHCEELLTQALSGRF 141 (154)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred hhccccccccccccccccccccccCcccc-------------ccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 88888888888888888888888888765 478888888888888888888888888765443
No 38
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=4.6e-20 Score=157.61 Aligned_cols=119 Identities=20% Similarity=0.295 Sum_probs=88.9
Q ss_pred HHHHHHcCChHHHHHHHHhchhccc-----ccCCCCCcHHHHHHHc---CcHHHHHHHHHhCCCccccccCCCCCHHHHH
Q 045393 229 LHYAAASGNVKMAQRLLEESKRLAY-----KRDCNGETPLHLAAEN---GKLKVLKLLINKYPDAIEIRNNSDRSILHVA 300 (580)
Q Consensus 229 L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 300 (580)
|..|++.++...+..++..|.+... ..+..|+||||+|++. |+.+++++|+++|++ ++.+|..|+||||+|
T Consensus 10 L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-in~~d~~g~TpLh~A 88 (154)
T d1dcqa1 10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYC 88 (154)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC-hhhhhhhhccccccc
Confidence 4456677777777777766654421 1255678888888863 567888888888887 788888888888888
Q ss_pred HHcCCHHHHHHHhcCcchhhhcccccCCCCcHHHHHHhcCChhHHHHhhcC
Q 045393 301 AKHGNWNIVSFILRSPEMENLINLVDRNGNTPLHLAAMGLHSDVVFTLSRH 351 (580)
Q Consensus 301 ~~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~Ll~~ 351 (580)
++.|+.+++++|+++ +++++.+|.+|.||||+|++.|+.+++++|++.
T Consensus 89 ~~~~~~~~v~~Ll~~---gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~ 136 (154)
T d1dcqa1 89 CLTDNAECLKLLLRG---KASIEIANESGETPLDIAKRLKHEHCEELLTQA 136 (154)
T ss_dssp HHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccccccccccccc---CccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 888888888888887 444788888888888888888888888888764
No 39
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=20.72 E-value=50 Score=16.11 Aligned_cols=7 Identities=57% Similarity=0.610 Sum_probs=3.3
Q ss_pred HHHHhhh
Q 045393 559 IVFDQTE 565 (580)
Q Consensus 559 ~~~~~~~ 565 (580)
++++|+|
T Consensus 18 i~ylqte 24 (26)
T d1rzhh2 18 IYYLQTE 24 (26)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 3344554
Done!