Query 045396
Match_columns 399
No_of_seqs 215 out of 680
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 22:47:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045396.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045396hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rg0_A Calreticulin; beta-sand 100.0 9E-122 3E-126 901.9 24.0 310 20-349 2-322 (332)
2 1jhn_A Calnexin; jelly-roll, b 100.0 5E-117 2E-121 890.8 24.8 320 19-339 20-421 (424)
3 3pow_A Calreticulin; legume le 100.0 2.7E-99 9E-104 726.6 20.8 254 19-348 6-262 (265)
4 1hhn_A Calreticulin; molecular 99.9 9.1E-28 3.1E-32 201.9 4.7 79 209-288 1-81 (101)
5 1jhn_A Calnexin; jelly-roll, b 99.8 3.5E-21 1.2E-25 194.8 6.1 87 194-280 251-354 (424)
6 1hhn_A Calreticulin; molecular 99.8 6.9E-21 2.4E-25 160.2 4.9 85 195-291 6-98 (101)
7 3ici_C Calnexin, PP90; protein 99.4 2.9E-13 9.9E-18 95.3 3.4 34 242-275 5-38 (38)
8 3rg0_A Calreticulin; beta-sand 99.0 3.3E-11 1.1E-15 119.1 0.8 58 218-289 181-242 (332)
9 3ici_C Calnexin, PP90; protein 98.2 5.4E-07 1.9E-11 63.5 3.1 29 223-251 4-38 (38)
10 4b1m_A Levanase; hydrolase, CB 63.7 36 0.0012 29.9 9.1 90 93-196 64-155 (185)
11 3zyp_A CIP1; metal binding pro 42.9 1.2E+02 0.0041 27.0 9.2 74 28-108 3-80 (218)
12 4azz_A Levanase; hydrolase; 1. 47.5 5.6 0.00019 34.2 0.0 91 92-197 42-135 (172)
13 2quo_A Heat-labIle enterotoxin 30.2 33 0.0011 28.6 2.9 24 111-137 101-124 (126)
14 2kbg_A N-CAM 2, neural cell ad 28.1 55 0.0019 26.6 4.0 61 128-191 20-82 (114)
15 2v73_A CBM40, putative EXO-alp 27.0 75 0.0026 29.1 5.0 106 79-201 27-135 (191)
16 3p91_A Proliferating cell nucl 21.6 59 0.002 30.1 3.3 23 88-119 232-254 (265)
17 2oka_A Hypothetical protein; P 20.3 69 0.0024 26.6 3.1 22 176-197 40-61 (104)
No 1
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=100.00 E-value=8.7e-122 Score=901.87 Aligned_cols=310 Identities=52% Similarity=1.006 Sum_probs=266.9
Q ss_pred hccceeeeeccCCC--CCCCCeEeCccccCCCCcCeEEEeccccCCC-CCCceeeeCccccceeecccCCCcCCCCCceE
Q 045396 20 IASAHVFFEERFDD--GWESRWVTSDWKKDENTAGEWNYTAGKWNGD-PNDKGIQTSEDYRFYAISAEFPEFSNKDKTLV 96 (399)
Q Consensus 20 ~~~~~v~F~E~F~~--~w~~rWv~S~~kk~~~~~G~w~~~~g~~~g~-~~D~GL~t~~~ak~yaIsa~l~~f~~~~k~LV 96 (399)
.++++|||+|+|++ +|++|||+|++++ ..|+|.+++|+|+|+ ++|+||||+++|||||||++|+||+|++|+||
T Consensus 2 ~~~~~vyF~E~F~d~~~w~~rWv~S~~~~---~~G~w~~~~g~~~~~~~~DkGL~t~~~ak~yAISakf~pf~n~~k~LV 78 (332)
T 3rg0_A 2 SMDPAIYFKEQFLDGDAWTNRWVESKHKS---DFGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEPFSNKGQTLV 78 (332)
T ss_dssp --CCCEEEEECCCSGGGGGGTEEECCSSS---SCCCEEEECCSSCSSTTTTCEEEECSSSEEEEEEEEEEEECCTTSCEE
T ss_pred CcceEEEEEeecCCCCcccCCceeCCCcc---cCCeEEeecCcccCCcccccceeecchhhhhhhhcccCCccCCCCCEE
Confidence 35789999999986 7999999999875 369999999999998 47999999999999999999977999999999
Q ss_pred EEEEEecccccccCceeEEeccCCCCCCCcCCCCCeeEEEecCCCCCCCCeEEEEEeeCCcccccccCCCCCCCCccceE
Q 045396 97 FQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVY 176 (399)
Q Consensus 97 vQYeVK~e~~idCGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~~~~kk~~~~~~D~~tHLY 176 (399)
|||||||||+|+|||||||||+.++||++|+++|||+||||||+||++++||||||+|++++|+++++++|++|++||||
T Consensus 79 vQYeVK~e~~idCGGaYiKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvH~I~~~k~~~h~~kk~i~~~~D~~THLY 158 (332)
T 3rg0_A 79 VQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLY 158 (332)
T ss_dssp EEEEEEETTCCSEEECCEEEECSSCCGGGCCTTSCCSEEEEEEEETTTEEEEEEEEEETTEEEECSSCCBCCCSSSEEEE
T ss_pred EEEEEEcccccccCceEEEeecCcCCHhhcCCCCcceEEecCcccCCCCCEEEEEEEeCCccccccCCCCCCCCCCCceE
Confidence 99999999999999999999999999999999999999999999997799999999999999999999999999999999
Q ss_pred EEEeCCCCceEEEECceeeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 045396 177 TFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEITDPDAKKPD 256 (399)
Q Consensus 177 TLIi~pdntyeI~ID~~~~~~Gsl~~Dwd~~pp~~I~Dp~d~KPeDWdd~~~I~DP~a~KPeDWDdep~~IpDP~a~KPe 256 (399)
||||||||||+|+|||++|.+|||++||+++||++|+||+++||+||+|+++||||+|+||+|||+ |
T Consensus 159 TLIi~pdntyeI~ID~~~v~~GsL~~Dwd~~ppk~I~Dp~d~KPedWdd~~~I~DP~a~KPeDWd~-p------------ 225 (332)
T 3rg0_A 159 TLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK-G------------ 225 (332)
T ss_dssp EEEECTTSEEEEEETTEEEEEEEHHHHSCCSCCSEEECTTCCCCTTCCCCCCCC--------------------------
T ss_pred EEEEcCCCeEEEEECCEEEecccccCCCCcCCccccCCcccCCcccCcCcccCCCcccCCcccccc-c------------
Confidence 999999999999999999999999999999999999999999999999999999999999999995 2
Q ss_pred CCCCCCCCcccCCCCCCCCCCCCCCCC--CCCC------CCCCCCcceEeEEEeEeecCceeeeEEEcCCHHHHHHHHHH
Q 045396 257 DWDDEEDGEWTAPTIPNPEYKGPWKPK--DDPD------LYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEE 328 (399)
Q Consensus 257 dwd~~~dGeW~pp~I~NP~YkG~WkP~--~dp~------~~~~~~i~~vG~ElW~~~~g~~FDNili~dd~~~A~~~~~~ 328 (399)
++.|.|+||+|+||+|+|.|+|| +||+ +|++.+|++||||||||++||||||||||+|+++|++++++
T Consensus 226 ----~YkG~Wkp~~I~NP~YkG~W~p~~I~NP~Y~~D~~~~~~~~i~~iG~ElWq~~sg~iFDNilItdd~~~A~~~~~~ 301 (332)
T 3rg0_A 226 ----GSGGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 301 (332)
T ss_dssp -------------------CCCCCCCCEEECTTCCCCTTTTCCSCEEEEEEEEEESSCCEEEEEEEEESCHHHHHHHHHT
T ss_pred ----cccccccccccCCCcccCCccCCccCCCCCcCCcchhccccccEEEEEEEeccCCcEEeeEEEcCCHHHHHHHHHH
Confidence 27899999999999999999999 5554 56789999999999999999999999999999999999999
Q ss_pred hhccchhHHHHHHHHHHhhhh
Q 045396 329 TWGKHKDAEKAAFDEAEKKRE 349 (399)
Q Consensus 329 t~~~k~~~E~~~~~~~~~~~~ 349 (399)
||++++.+|++|+++++++++
T Consensus 302 t~~~~~~~Ek~~~~~~~~~~~ 322 (332)
T 3rg0_A 302 TWGVTKAAEKQMKDKQDEEQR 322 (332)
T ss_dssp THHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHhHHHh
Confidence 999999999999887655444
No 2
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=100.00 E-value=5.4e-117 Score=890.80 Aligned_cols=320 Identities=40% Similarity=0.796 Sum_probs=275.9
Q ss_pred hhccceeeeeccCCCCCCCCeEeCccccCC------CCcCeEEEeccccCCCCCCceeeeCccccceeecccCC-CcCCC
Q 045396 19 TIASAHVFFEERFDDGWESRWVTSDWKKDE------NTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFP-EFSNK 91 (399)
Q Consensus 19 ~~~~~~v~F~E~F~~~w~~rWv~S~~kk~~------~~~G~w~~~~g~~~g~~~D~GL~t~~~ak~yaIsa~l~-~f~~~ 91 (399)
.++++++||+|+|+++|.+|||+|+++|++ .|.|+|.+++|+++|.++|+||||+++|||||||++|+ +|+|+
T Consensus 20 p~~~~~~~F~E~F~~~~~~rWv~S~~~k~~~~~~~~~y~G~w~~~~~~~~~~~~DkGL~~~~~ar~yaISa~~~kpf~~~ 99 (424)
T 1jhn_A 20 PVPSGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFD 99 (424)
T ss_dssp CCCCSCCSSEECCCSSSCCSCCCCCCC-----------CCEEECCBCTTCSSTTCBCCEEECSSCCCEEEEEEEEEECSS
T ss_pred CCCCcceeEeeecCCCccCCceeCcccccccccccccCCeEEEEecCccCCCccccceeeccchhHHHHHHhhcCccccC
Confidence 366899999999999999999999998763 36799999999999999999999999999999999998 69999
Q ss_pred CCceEEEEEEecccccccCceeEEeccCC--CCCCCcCCCCCeeEEEecCCCCCCCCeEEEEEeeCCcc-------cccc
Q 045396 92 DKTLVFQFSVKHEQKLDCGGGYMKLLSGE--VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTN-------KLIK 162 (399)
Q Consensus 92 ~k~LVvQYeVK~e~~idCGGaYIKLl~~~--~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~-------~~~k 162 (399)
+|+||||||||||++|+|||||||||+.. ++|++|+++|||+||||||+|| .++||||||||++.+ |+++
T Consensus 100 ~k~LVvQYeVk~q~~idCGGaYiKLl~~~~~~d~~~f~~~TpY~IMFGPD~CG-~~~kvH~I~~~knp~~g~~~ekh~~~ 178 (424)
T 1jhn_A 100 TKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKR 178 (424)
T ss_dssp SSCEEEEEEECCTTCCSEEECCEEEEBCCSSCCGGGCCSSCCEEEEEEEEEES-SCCEEEEEEEEECTTTCCEEEECCCC
T ss_pred CCCEEEEEEEEecccccccceEEEeecCcccCCHhHcCCCCCceEeccCCccC-CCCeEEEEEecCCCCCCchhhhcccC
Confidence 99999999999999999999999999974 8999999999999999999999 799999999998754 7766
Q ss_pred cCCCC---CCCCccceEEEEeCCCCceEEEECceeeccCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCccCCCCCCCC
Q 045396 163 KEVPC---ETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWD--LLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKP 237 (399)
Q Consensus 163 k~~~~---~~D~~tHLYTLIi~pdntyeI~ID~~~~~~Gsl~~Dwd--~~pp~~I~Dp~d~KPeDWdd~~~I~DP~a~KP 237 (399)
++++| ++|++||||||||||||||+|+|||++|.+|||++||+ ++||++|+||+++||+||+++++|+||+|+||
T Consensus 179 ~~~~~~~~~~D~~tHlYTLIl~pdntyei~ID~~~v~~GsL~~D~~Pp~~pp~~I~Dp~~~KP~DWde~~~I~Dp~a~KP 258 (424)
T 1jhn_A 179 PDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAVKP 258 (424)
T ss_dssp CSSCCTHHHHSCSCEEEEEEEETTTEEEEEETTEEEEEEC-------CCSSCCCCBCTTCCCCTTCCCCSEEECSSCCCC
T ss_pred CcccccccccCCCceEEEEEEcCCCcEEEEECCceecccccHHhccccCCCcccccCccccCccccccccccCCcccCCc
Confidence 66654 58999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCC--------------------CCCCCCCCCCCCCCCCCCCCCCcccC-------------------CCCCCCCCCC
Q 045396 238 EGYDD--------------------IPKEITDPDAKKPDDWDDEEDGEWTA-------------------PTIPNPEYKG 278 (399)
Q Consensus 238 eDWDd--------------------ep~~IpDP~a~KPedwd~~~dGeW~p-------------------p~I~NP~YkG 278 (399)
+|||+ +|++|+||+|+||++||++++|+|+| |||.||+|+|
T Consensus 259 eDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~~G~W~~P~i~NP~~~~~~gcG~W~~P~I~NP~ykG 338 (424)
T 1jhn_A 259 DDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKG 338 (424)
T ss_dssp TTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGTTSSCBSSCCCCEEECTTCCC
T ss_pred cccccCCccccCCccccCCCCccccccccCCCcccCCccccccCCCccccCcccCCchhcccccCCcccCCCCCCccccC
Confidence 99973 57899999999999999887777664 4555555556
Q ss_pred CCCCC----------------CCCCC------CCCCCcceEeEEEeEeecCceeeeEEEcCCHHHHHHHHHHhhccchhH
Q 045396 279 PWKPK----------------DDPDL------YVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKHKDA 336 (399)
Q Consensus 279 ~WkP~----------------~dp~~------~~~~~i~~vG~ElW~~~~g~~FDNili~dd~~~A~~~~~~t~~~k~~~ 336 (399)
.|+|+ +||+| |+|.+|++||||||||++||+|||||||+|+++|++++++||+.++.+
T Consensus 339 ~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~p~~~~~i~~iG~ElW~~~~g~~FDNilItdd~~~A~~~~~~t~~~k~~~ 418 (424)
T 1jhn_A 339 KWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIVCGDRRVVDDWANDGWGLKKAA 418 (424)
T ss_dssp SCCCCEEECTTCCCSCCCCBCCCTTCCCCCCTTCCCCEEEEEECCCCSSSCCBCEEEEEESSSHHHHHHHHHTTTC----
T ss_pred cccCCccCCCcccccccccccCCccccCCCcccccCcccEEEEEeEEeeCCcEEeeEEEcCCHHHHHHHHHhhhhhhhhh
Confidence 66555 55554 568999999999999999999999999999999999999999999988
Q ss_pred HHH
Q 045396 337 EKA 339 (399)
Q Consensus 337 E~~ 339 (399)
|.+
T Consensus 419 e~~ 421 (424)
T 1jhn_A 419 DGA 421 (424)
T ss_dssp ---
T ss_pred hhh
Confidence 854
No 3
>3pow_A Calreticulin; legume lectin fold, CNX/CRT family, multi-functional, carboh binding, peptide binding, multi-compartmental, chaperone; 1.55A {Homo sapiens} PDB: 3pos_A 3o0w_A* 3o0v_A* 3o0x_A*
Probab=100.00 E-value=2.7e-99 Score=726.64 Aligned_cols=254 Identities=53% Similarity=0.996 Sum_probs=236.1
Q ss_pred hhccceeeeeccCCC--CCCCCeEeCccccCCCCcCeEEEeccccCCC-CCCceeeeCccccceeecccCCCcCCCCCce
Q 045396 19 TIASAHVFFEERFDD--GWESRWVTSDWKKDENTAGEWNYTAGKWNGD-PNDKGIQTSEDYRFYAISAEFPEFSNKDKTL 95 (399)
Q Consensus 19 ~~~~~~v~F~E~F~~--~w~~rWv~S~~kk~~~~~G~w~~~~g~~~g~-~~D~GL~t~~~ak~yaIsa~l~~f~~~~k~L 95 (399)
++++++|||.|+|++ +|++|||+|+++++ .|+|.+++|+|+++ ++|+||||+++|||||||++|+||+|++|+|
T Consensus 6 ~~~~~~v~F~E~Fdd~~~w~~rWv~S~~kk~---~G~w~~~~g~~~~~~~~DkGL~t~~~Ak~yaISakl~pf~~~~k~L 82 (265)
T 3pow_A 6 EGREPAVYFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTL 82 (265)
T ss_dssp -CCCCSEEEEECCCSGGGGGGTEEECCSSSC---CCCEEEECCSSCSCTTTTCEEEECSSSEEEEEEEEEEEECCTTSCE
T ss_pred eeeeeeEEEEeecCCCCcccCCeeeCCCcCc---CCeEEeecccccCCcccccceeecchhhhhhhhcccCCccCCCCCE
Confidence 678899999999985 79999999998753 69999999999988 5799999999999999999997799999999
Q ss_pred EEEEEEecccccccCceeEEeccCCCCCCCcCCCCCeeEEEecCCCCCCCCeEEEEEeeCCcccccccCCCCCCCCccce
Q 045396 96 VFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHV 175 (399)
Q Consensus 96 VvQYeVK~e~~idCGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~~~~kk~~~~~~D~~tHL 175 (399)
|||||||||++|+|||||||||+.++||++|+++|||+||||||+||++++||||||+|++++|+++++++|++|++|||
T Consensus 83 VvQYeVk~q~~idCGGaYiKLl~~~~~~~~f~~~tpY~IMFGPD~CG~~~~kvHfI~~~k~~~h~~~~~~~~~~D~~tHL 162 (265)
T 3pow_A 83 VVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHL 162 (265)
T ss_dssp EEEEEEECTTCCSEEECCEEEECTTCCGGGCCTTSCCSEEEEEEEESTTCEEEEEEEEETTEEEECSSCCBCCCSSSEEE
T ss_pred EEEEEEEeccccccCceEEEeecCCCCHhhcCCCCCceEEecCcccCCCCCEEEEEEEcCCccccccCCCCCCCCCCCce
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEECceeeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 045396 176 YTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEITDPDAKKP 255 (399)
Q Consensus 176 YTLIi~pdntyeI~ID~~~~~~Gsl~~Dwd~~pp~~I~Dp~d~KPeDWdd~~~I~DP~a~KPeDWDdep~~IpDP~a~KP 255 (399)
|||||||||||+|+|||+++.+|||.+||+++||
T Consensus 163 YTLIi~pdntyeI~ID~~~v~~GsL~~d~df~Pp---------------------------------------------- 196 (265)
T 3pow_A 163 YTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPG---------------------------------------------- 196 (265)
T ss_dssp EEEEECTTSEEEEEETTEEEEEEEHHHHSCC-------------------------------------------------
T ss_pred EEEEEcCCCeEEEEECCEEeeeccccCccccCCC----------------------------------------------
Confidence 9999999999999999999999999999999987
Q ss_pred CCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCcceEeEEEeEeecCceeeeEEEcCCHHHHHHHHHHhhccchh
Q 045396 256 DDWDDEEDGEWTAPTIPNPEYKGPWKPKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYAKKLAEETWGKHKD 335 (399)
Q Consensus 256 edwd~~~dGeW~pp~I~NP~YkG~WkP~~dp~~~~~~~i~~vG~ElW~~~~g~~FDNili~dd~~~A~~~~~~t~~~k~~ 335 (399)
.+||++|++.+|++||||||||+|||||||||||||+++|++++++||++++.
T Consensus 197 ---------------------------~~d~~ly~~~~i~~vGldlWQvksGtiFDNiLITDd~~~A~~~~eetw~~~k~ 249 (265)
T 3pow_A 197 ---------------------------SGDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKA 249 (265)
T ss_dssp -------------------------------CTTCCSCEEEEEEEEEESSCCCEEEEEEEESCHHHHHHHHHHTHHHHHH
T ss_pred ---------------------------CCCccccccccccEEEEEEEEecCCeEeccEEecCCHHHHHHHHHHHHHhhhH
Confidence 25688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 045396 336 AEKAAFDEAEKKR 348 (399)
Q Consensus 336 ~E~~~~~~~~~~~ 348 (399)
+|++|++++++.+
T Consensus 250 ~Ek~~~~~~~~~~ 262 (265)
T 3pow_A 250 AEKQMKDKQDEEQ 262 (265)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999998765443
No 4
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=99.94 E-value=9.1e-28 Score=201.92 Aligned_cols=79 Identities=66% Similarity=1.316 Sum_probs=70.0
Q ss_pred CCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC--CCC
Q 045396 209 PKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEITDPDAKKPDDWDDEEDGEWTAPTIPNPEYKGPWKPK--DDP 286 (399)
Q Consensus 209 p~~I~Dp~d~KPeDWdd~~~I~DP~a~KPeDWDdep~~IpDP~a~KPedwd~~~dGeW~pp~I~NP~YkG~WkP~--~dp 286 (399)
|++|+||+++||+||+++++|+||+|+||+|||+ +++|+||+|+||++||++++|+|++|||+||+|+|.|+|+ +||
T Consensus 1 p~~I~Dp~~~KPeDWd~~~~I~DP~a~KPeDWde-~~~I~dP~~~kP~dWd~~~~G~W~~p~I~NP~ykG~W~pp~I~NP 79 (101)
T 1hhn_A 1 SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNP 79 (101)
T ss_dssp CCSBCCSTTCCCSCCSTTSEECCSSCCCCSTTCC-CSEEECTTCCCCTTCCHHHHSSCCCCEEECTTCCSSCCCCCEECS
T ss_pred CcccCCcccCCccccccccccCCcccCCccCccc-cccCCCcccCCccccCcccCCcccCCcCCCccCcCcccCCccCCC
Confidence 6899999999999999999999999999999998 8899999999999999888888888777777777777776 555
Q ss_pred CC
Q 045396 287 DL 288 (399)
Q Consensus 287 ~~ 288 (399)
+|
T Consensus 80 ~Y 81 (101)
T 1hhn_A 80 DY 81 (101)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 5
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=99.82 E-value=3.5e-21 Score=194.79 Aligned_cols=87 Identities=36% Similarity=0.801 Sum_probs=80.7
Q ss_pred eeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--ccCCCCCCCCCCCCC------CCCCCCCCCCC---------CCC
Q 045396 194 EKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKE--YIPDPEDKKPEGYDD------IPKEITDPDAK---------KPD 256 (399)
Q Consensus 194 ~~~~Gsl~~Dwd~~pp~~I~Dp~d~KPeDWdd~~--~I~DP~a~KPeDWDd------ep~~IpDP~a~---------KPe 256 (399)
......+++||+..+|.+|+||+++||+||++.+ +|+||+++||+|||+ ++++|+||.|+ .|.
T Consensus 251 ~Dp~a~KPeDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~~G~W~~P~i~NP~~~~~~gcG~W~~P~ 330 (424)
T 1jhn_A 251 PDPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPM 330 (424)
T ss_dssp ECSSCCCCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGTTSSCBSSCCCCE
T ss_pred CCcccCCccccccCCccccCCccccCCCCccccccccCCCcccCCccccccCCCccccCcccCCchhcccccCCcccCCC
Confidence 4467789999999999999999999999998864 999999999999998 49999999998 699
Q ss_pred CCCCCCCCcccCCCCCCCCCCCCC
Q 045396 257 DWDDEEDGEWTAPTIPNPEYKGPW 280 (399)
Q Consensus 257 dwd~~~dGeW~pp~I~NP~YkG~W 280 (399)
++|+++.|+|+||+|+||+|+|.|
T Consensus 331 I~NP~ykG~W~pp~I~NP~Ykg~W 354 (424)
T 1jhn_A 331 IDNPNYKGKWKPPMIDNPNYQGIW 354 (424)
T ss_dssp EECTTCCCSCCCCEEECTTCCCSC
T ss_pred CCCccccCcccCCccCCCcccccc
Confidence 999999999999999999999998
No 6
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=99.81 E-value=6.9e-21 Score=160.17 Aligned_cols=85 Identities=45% Similarity=0.895 Sum_probs=77.1
Q ss_pred eccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCcccC
Q 045396 195 KQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDD------IPKEITDPDAKKPDDWDDEEDGEWTA 268 (399)
Q Consensus 195 ~~~Gsl~~Dwd~~pp~~I~Dp~d~KPeDWdd~~~I~DP~a~KPeDWDd------ep~~IpDP~a~KPedwd~~~dGeW~p 268 (399)
..+.++++||+. +++|+||+++||+||+++++|+||+++||++|++ ++++|+||.++ |+|+|
T Consensus 6 Dp~~~KPeDWd~--~~~I~DP~a~KPeDWde~~~I~dP~~~kP~dWd~~~~G~W~~p~I~NP~yk----------G~W~p 73 (101)
T 1hhn_A 6 DPDAAKPEDWDE--RAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYK----------GEWKP 73 (101)
T ss_dssp CSTTCCCSCCST--TSEECCSSCCCCSTTCCCSEEECTTCCCCTTCCHHHHSSCCCCEEECTTCC----------SSCCC
T ss_pred CcccCCcccccc--ccccCCcccCCccCccccccCCCcccCCccccCcccCCcccCCcCCCccCc----------CcccC
Confidence 356778999997 7899999999999999999999999999999997 48888888765 99999
Q ss_pred CCCCCCCCCCCCCCC--CCCCCCCC
Q 045396 269 PTIPNPEYKGPWKPK--DDPDLYVY 291 (399)
Q Consensus 269 p~I~NP~YkG~WkP~--~dp~~~~~ 291 (399)
+||+||+|+|.|+|+ +||+|+.-
T Consensus 74 p~I~NP~Ykg~W~p~~I~NP~y~~d 98 (101)
T 1hhn_A 74 RQIDNPDYKGTWIHPEIDNPEYSPD 98 (101)
T ss_dssp CCEECSSCCCCCCCCCBCCTTCCSS
T ss_pred CccCCCCCCCCccCCccCCCCccCC
Confidence 999999999999999 99998753
No 7
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=99.36 E-value=2.9e-13 Score=95.33 Aligned_cols=34 Identities=62% Similarity=1.231 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCC
Q 045396 242 DIPKEITDPDAKKPDDWDDEEDGEWTAPTIPNPE 275 (399)
Q Consensus 242 dep~~IpDP~a~KPedwd~~~dGeW~pp~I~NP~ 275 (399)
++|.+|+||+|+||++||+++||+|++|||+||+
T Consensus 5 dep~~IpDP~a~KP~DWdde~DGeWe~P~I~NPk 38 (38)
T 3ici_C 5 DEPKFIPDPNAEKPDDWNEDMDGEWEAPRISNPA 38 (38)
T ss_pred cccccccCCCCCCCCCcCcCcCCcccCCcCCCcC
Confidence 3589999999999999999999999999999995
No 8
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=99.03 E-value=3.3e-11 Score=119.08 Aligned_cols=58 Identities=41% Similarity=0.893 Sum_probs=26.9
Q ss_pred CCCCCCCC--CCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC--CCCCCC
Q 045396 218 KKPEDWDD--KEYIPDPEDKKPEGYDDIPKEITDPDAKKPDDWDDEEDGEWTAPTIPNPEYKGPWKPK--DDPDLY 289 (399)
Q Consensus 218 ~KPeDWdd--~~~I~DP~a~KPeDWDdep~~IpDP~a~KPedwd~~~dGeW~pp~I~NP~YkG~WkP~--~dp~~~ 289 (399)
.-++||+. .++|+||+|+||+|||+ +++|+||+++||+|| .||+|||+|+|+ +||+|-
T Consensus 181 sL~~Dwd~~ppk~I~Dp~d~KPedWdd-~~~I~DP~a~KPeDW-------------d~p~YkG~Wkp~~I~NP~Yk 242 (332)
T 3rg0_A 181 SLEDDWDFLPPKKIKDPDAAKPEDWDE-RAKIDDPTDSKPEDW-------------DKGGSGGEWKPRQIDNPDYK 242 (332)
T ss_dssp EHHHHSCCSCCSEEECTTCCCCTTCCC-CCCCC-----------------------------------------CC
T ss_pred cccCCCCcCCccccCCcccCCcccCcC-cccCCCcccCCcccc-------------ccccccccccccccCCCccc
Confidence 34788988 47999999999999998 889999999999998 488999999999 888863
No 9
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=98.24 E-value=5.4e-07 Score=63.48 Aligned_cols=29 Identities=31% Similarity=0.837 Sum_probs=21.3
Q ss_pred CCCCCccCCCCCCCCCCCCC------CCCCCCCCC
Q 045396 223 WDDKEYIPDPEDKKPEGYDD------IPKEITDPD 251 (399)
Q Consensus 223 Wdd~~~I~DP~a~KPeDWDd------ep~~IpDP~ 251 (399)
+++.++|+||+|+||+|||+ ++++|+||.
T Consensus 4 ~dep~~IpDP~a~KP~DWdde~DGeWe~P~I~NPk 38 (38)
T 3ici_C 4 MDEPKFIPDPNAEKPDDWNEDMDGEWEAPRISNPA 38 (38)
T ss_pred ccccccccCCCCCCCCCcCcCcCCcccCCcCCCcC
Confidence 44556777777777777765 589999984
No 10
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=63.74 E-value=36 Score=29.92 Aligned_cols=90 Identities=12% Similarity=0.218 Sum_probs=47.2
Q ss_pred CceEEEEEEecccccccCceeEEeccCCCCCCCcCCCCCeeEEEecCCCCCCCCeEEEEEee-CCccccccc-CCCCCCC
Q 045396 93 KTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTY-NGTNKLIKK-EVPCETD 170 (399)
Q Consensus 93 k~LVvQYeVK~e~~idCGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~-~~~~~~~kk-~~~~~~D 170 (399)
.+++|+-+||...+-..|-+-|- |....| ...-|.+.+.|.- +++.+ .+. ++....+.. +..+. .
T Consensus 64 ~Df~le~dvk~~~~~~~g~~Gi~-fR~~~d-----~~~gY~~~i~~~~-----~~~~l-~k~~~g~~~~L~~~~~~~~-~ 130 (185)
T 4b1m_A 64 SDFTYESDITIKDGNGRGAGALM-FRSDKD-----AKNGYLANVDAKH-----DLVKF-FKFENGAASVIAEYKTPID-V 130 (185)
T ss_dssp SSEEEEEEEEEEEEEEEEEEEEE-EEECTT-----SSSEEEEEEETTT-----TEEEE-EEEETTEEEEEEEEECCCC-S
T ss_pred cCEEEEEEEEEcCCCCcceEEEE-EEEcCC-----CCCcEEEEEECCC-----CEEEE-EEEeCCcEEEeeeccccCC-C
Confidence 67999999998764211212232 222111 1246888888742 34433 333 343333322 22222 2
Q ss_pred CccceEEEEeCCCCceEEEECceeec
Q 045396 171 QLTHVYTFILRPDATYSILIDNAEKQ 196 (399)
Q Consensus 171 ~~tHLYTLIi~pdntyeI~ID~~~~~ 196 (399)
...|-++++++ .++.+++|||+.+.
T Consensus 131 g~w~~l~I~~~-G~~i~~~vnG~~v~ 155 (185)
T 4b1m_A 131 NKKYHLKTEAE-GDRFKIYLDDRLVI 155 (185)
T ss_dssp SCCEEEEEEEE-TTEEEEEETTEEEE
T ss_pred CCeEEEEEEEE-CCEEEEEECCEEEE
Confidence 34444455554 67999999998754
No 11
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=42.92 E-value=1.2e+02 Score=27.00 Aligned_cols=74 Identities=11% Similarity=0.147 Sum_probs=43.3
Q ss_pred eccCCCC-CCCCeEeCccccCCCCcCeEEEeccccCCCCCCceeeeCccccce---eecccCCCcCCCCCceEEEEEEec
Q 045396 28 EERFDDG-WESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFY---AISAEFPEFSNKDKTLVFQFSVKH 103 (399)
Q Consensus 28 ~E~F~~~-w~~rWv~S~~kk~~~~~G~w~~~~g~~~g~~~D~GL~t~~~ak~y---aIsa~l~~f~~~~k~LVvQYeVK~ 103 (399)
.|.|+.+ +..+|...... ..-.|...+....- ..+.+.|.++..+.-| .+...+. .....+-+.|=||+
T Consensus 3 sddFEsg~~~~~W~~~~~~--~~g~g~v~vdt~~a--~sG~~slrvt~~~~~~~~~~~~~~~~---~~~~~~y~r~~v~~ 75 (218)
T 3zyp_A 3 SDDFESGWDQTKWPISAPD--CNQGGTVSLDTTVA--HSGSNSMKVVGGPNGYCGHIFFGTTQ---VPTGDVYVRAWIRL 75 (218)
T ss_dssp EECSTTCCCTTTSCEECSS--CCCSCEEEEESSSC--SSSSCEEEEECCSSGGGGCEEEEECC---CCSSSEEEEEEEEE
T ss_pred ccccccCCCCCCceecCCC--CCCccEEEEccccc--cCCceEEEEEccCCCccceEEeeccc---CCCceEEEEEEEEe
Confidence 4789887 46889765321 12247777766543 2456778765444222 2333322 23456888888888
Q ss_pred ccccc
Q 045396 104 EQKLD 108 (399)
Q Consensus 104 e~~id 108 (399)
...+.
T Consensus 76 ~~~~~ 80 (218)
T 3zyp_A 76 QTALG 80 (218)
T ss_dssp SSCCC
T ss_pred cccCC
Confidence 76654
No 12
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=47.46 E-value=5.6 Score=34.16 Aligned_cols=91 Identities=14% Similarity=0.288 Sum_probs=42.4
Q ss_pred CCceEEEEEEecccccccCceeEEeccCCCCCCCcCCCCCeeEEEecCCCCCCCCeEEEEEee-CCccccccc-CCCCCC
Q 045396 92 DKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTY-NGTNKLIKK-EVPCET 169 (399)
Q Consensus 92 ~k~LVvQYeVK~e~~idCGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~-~~~~~~~kk-~~~~~~ 169 (399)
..+++|+.+||+..+-.+|.+=|-+-.. .| ...-|.+.+.|.. +++.+ .+. .+....+.. +....
T Consensus 42 ~~df~le~~v~~~~~~~~~~~Gi~fR~~-~d-----~~~~Y~~~i~~~~-----~~~~l-~~~~~G~~~~l~~~~~~~~- 108 (172)
T 4azz_A 42 GSDFTYESDITIKDGNGRGAGALMFRSD-KD-----AKNGYLANVDAKH-----DLVKF-FKFENGAASVIAEYKTPID- 108 (172)
Confidence 3668888888876541123332322221 11 1235787777642 23322 122 222222221 11222
Q ss_pred CCccceEEEEeCC-CCceEEEECceeecc
Q 045396 170 DQLTHVYTFILRP-DATYSILIDNAEKQS 197 (399)
Q Consensus 170 D~~tHLYTLIi~p-dntyeI~ID~~~~~~ 197 (399)
...-|+|-|.- .++.+++|||+.+.+
T Consensus 109 --~g~w~~l~I~~~G~~i~~~vnG~~v~~ 135 (172)
T 4azz_A 109 --VNKKYHLKTEAEGDRFKIYLDDRLVID 135 (172)
Confidence 22235554443 567888998866544
No 13
>2quo_A Heat-labIle enterotoxin B chain; beta sandwich, claudin-4 binding domain, therapeutic agent; 1.75A {Clostridium perfringens}
Probab=30.16 E-value=33 Score=28.56 Aligned_cols=24 Identities=33% Similarity=0.861 Sum_probs=17.5
Q ss_pred ceeEEeccCCCCCCCcCCCCCeeEEEe
Q 045396 111 GGYMKLLSGEVDQKKFGGDTPYSIMFG 137 (399)
Q Consensus 111 GaYIKLl~~~~d~~~f~~~TpY~IMFG 137 (399)
|-|+-++.+. ..+++.-||+|+|-
T Consensus 101 gqyvlvmkan---ssysgnypysilfq 124 (126)
T 2quo_A 101 GQYVLVMKAN---SSYSGNYPYSILFQ 124 (126)
T ss_dssp EEEEEEEEES---SCCSSCBCCEEEEE
T ss_pred CcEEEEEecc---CcccCCCCceEeee
Confidence 5666665542 46888999999994
No 14
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=28.11 E-value=55 Score=26.62 Aligned_cols=61 Identities=13% Similarity=0.123 Sum_probs=36.8
Q ss_pred CCCCeeEEEecCCCCCCCCeEEEEEeeCCcccc-cccCCCCCCCCccceEEEE-eCCCCceEEEEC
Q 045396 128 GDTPYSIMFGPDICGYSTKKVHAILTYNGTNKL-IKKEVPCETDQLTHVYTFI-LRPDATYSILID 191 (399)
Q Consensus 128 ~~TpY~IMFGPD~CG~~~~kvHfI~~~~~~~~~-~kk~~~~~~D~~tHLYTLI-i~pdntyeI~ID 191 (399)
..+-++|..-|-.-| ..-..|+++.|+.+... +..... ....+.-|+|. |.|+..|++||=
T Consensus 20 ~~~sv~L~W~p~~dg-gsPI~~Y~I~yr~~~~~~w~~~~~--~~~~~~~~~l~~L~p~t~Y~frV~ 82 (114)
T 2kbg_A 20 SGKSFKLSITKQDDG-GAPILEYIVKYRSKDKEDQWLEKK--VQGNKDHIILEHLQWTMGYEVQIT 82 (114)
T ss_dssp STTCEEEEECCCCCS-SSCCSEEEEEEEESSCCSCCEEEE--EETTTCCEEECCCCTTCCEEEEEE
T ss_pred CCCEEEEEEECCCCC-CCcccEEEEEEEeCCCCCcEEeEE--cCCCcCEEEEcCCCCCCEEEEEEE
Confidence 445577778775555 55678888888643211 110001 11223458884 899999999983
No 15
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=26.95 E-value=75 Score=29.08 Aligned_cols=106 Identities=14% Similarity=0.153 Sum_probs=66.1
Q ss_pred eeecccCCCcCCCC-CceEEEEEEecccccccCceeEEeccCCCCCCCcCCCCCeeEEEecCCCCCCCCeEEEEEeeCC-
Q 045396 79 YAISAEFPEFSNKD-KTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG- 156 (399)
Q Consensus 79 yaIsa~l~~f~~~~-k~LVvQYeVK~e~~idCGGaYIKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvHfI~~~~~- 156 (399)
--||..|+.+.+-+ -+++|-| |... .+..-||+-. +.+.+ .-|--||=. +.++-|.+|-++
T Consensus 27 ~d~s~~l~~lk~L~~gTI~v~f--ks~~-----~~~q~LfSIs-N~k~~---n~yf~lyi~------~g~lg~e~R~~~~ 89 (191)
T 2v73_A 27 VNITGDLEKFSSLEEGTIVTRF--NMND-----TSIQSLIGLS-DGNKA---NNYFSLYVS------GGKVGYELRRQEG 89 (191)
T ss_dssp EECGGGGGGTTTCSSEEEEEEE--EECC-----CSCEEEEEEE-CTTCS---SCEEEEEEC------SSEEEEEEEECTT
T ss_pred cchhhhhHHhcCcCCcEEEEEE--ecCC-----CcceEEEEcc-CCCCc---cceEEEEEe------CCEEEEEEecCCC
Confidence 35777777654433 4455444 4443 3334788763 33333 346666632 247778888753
Q ss_pred -cccccccCCCCCCCCccceEEEEeCCCCceEEEECceeeccCCCC
Q 045396 157 -TNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLY 201 (399)
Q Consensus 157 -~~~~~kk~~~~~~D~~tHLYTLIi~pdntyeI~ID~~~~~~Gsl~ 201 (399)
.+|....+.....+...|--||.+..+.+|.|++||+.|.+..+.
T Consensus 90 ~~~~~~~~~a~v~~~~~wntvaf~~d~~~~~~ly~NG~~V~t~~~~ 135 (191)
T 2v73_A 90 NGDFNVHHSADVTFNRGINTLALKIEKGIGAKIFLNGSLVKTVSDP 135 (191)
T ss_dssp SSCEEEEEEEECCCCSSCEEEEEEEETTTEEEEEETTEEEEEEECT
T ss_pred ceeeeeecccceecCCceEEEEEEEcCCccEEEEECCEEEEEEecc
Confidence 355554554554544667779999888899999999999887443
No 16
>3p91_A Proliferating cell nuclear antigen; DNA binding protein, DNA replication, processivity, sliding; 2.40A {Entamoeba histolytica}
Probab=21.64 E-value=59 Score=30.10 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=18.3
Q ss_pred cCCCCCceEEEEEEecccccccCceeEEeccC
Q 045396 88 FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG 119 (399)
Q Consensus 88 f~~~~k~LVvQYeVK~e~~idCGGaYIKLl~~ 119 (399)
|++ +.+|+|||.+ |||||+++-+
T Consensus 232 ~~~-~~Pl~l~~~i--------~~g~~~f~lA 254 (265)
T 3p91_A 232 LSG-QAPLIMEFKG--------EACVLKFYLA 254 (265)
T ss_dssp ECS-SSCEEEEEEE--------TTEEEEEEEC
T ss_pred eCC-CccEEEEEEE--------CCEEEEEEEc
Confidence 443 6999999996 6889998755
No 17
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=20.33 E-value=69 Score=26.61 Aligned_cols=22 Identities=9% Similarity=0.068 Sum_probs=18.2
Q ss_pred EEEEeCCCCceEEEECceeecc
Q 045396 176 YTFILRPDATYSILIDNAEKQS 197 (399)
Q Consensus 176 YTLIi~pdntyeI~ID~~~~~~ 197 (399)
.+|+--..+.|||.|||+.|-+
T Consensus 40 v~l~P~~~G~FEV~vng~lV~S 61 (104)
T 2oka_A 40 VCLEPGTGGVFRITCDGVQVWE 61 (104)
T ss_dssp EEEEEECTTCEEEEETTEEEEE
T ss_pred EEEEeCCCceEEEEECCEEEEE
Confidence 5777777899999999998843
Done!