Query 045402
Match_columns 396
No_of_seqs 207 out of 1683
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 22:52:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045402.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045402hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 2.2E-63 7.4E-68 492.9 39.9 338 23-381 20-421 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 1.1E-59 3.9E-64 464.6 39.1 330 28-385 18-356 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 1.2E-57 4.1E-62 445.5 41.1 327 29-384 13-374 (376)
4 1czf_A Polygalacturonase II; b 100.0 1E-57 3.5E-62 441.8 34.7 322 28-384 27-358 (362)
5 2uvf_A Exopolygalacturonase; G 100.0 2.3E-55 7.9E-60 452.2 39.9 332 26-371 152-564 (608)
6 2iq7_A Endopolygalacturonase; 100.0 2.2E-55 7.5E-60 423.1 35.0 318 45-384 6-333 (339)
7 1nhc_A Polygalacturonase I; be 100.0 2.3E-55 7.9E-60 422.4 34.9 317 45-384 6-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 1E-54 3.4E-59 419.5 36.9 319 45-384 6-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 1.2E-54 4.2E-59 417.6 36.2 315 46-384 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 3.2E-54 1.1E-58 413.1 25.0 308 47-383 8-328 (335)
11 2x6w_A Tail spike protein; vir 100.0 5.9E-47 2E-51 377.4 20.6 293 27-372 48-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 1.3E-40 4.5E-45 336.8 18.7 304 31-370 143-520 (549)
13 3gq8_A Preneck appendage prote 100.0 6.6E-39 2.3E-43 321.2 26.2 270 27-343 19-309 (609)
14 3gqn_A Preneck appendage prote 100.0 1.1E-38 3.8E-43 324.0 23.3 270 27-343 19-309 (772)
15 1ogo_X Dextranase; hydrolase, 100.0 4.5E-38 1.6E-42 317.9 26.6 267 61-370 229-545 (574)
16 1h80_A IOTA-carrageenase; hydr 100.0 2.5E-37 8.6E-42 305.9 29.2 299 24-370 15-360 (464)
17 2pyg_A Poly(beta-D-mannuronate 100.0 3.6E-29 1.2E-33 244.9 28.1 303 30-370 2-359 (377)
18 2vbk_A Tailspike-protein; vira 100.0 7.5E-30 2.6E-34 241.9 15.1 207 28-275 49-286 (514)
19 3jur_A EXO-poly-alpha-D-galact 99.9 9.1E-25 3.1E-29 216.3 26.3 228 111-371 191-444 (448)
20 2uvf_A Exopolygalacturonase; G 99.9 7.7E-22 2.6E-26 203.0 31.2 248 111-394 332-608 (608)
21 3eqn_A Glucan 1,3-beta-glucosi 99.9 2.4E-22 8.2E-27 204.6 22.6 265 27-341 46-328 (758)
22 2iq7_A Endopolygalacturonase; 99.9 4.4E-20 1.5E-24 177.2 27.9 217 88-343 69-322 (339)
23 1ia5_A Polygalacturonase; glyc 99.9 1.2E-19 4.1E-24 174.1 29.3 202 152-379 66-306 (339)
24 1bhe_A PEHA, polygalacturonase 99.9 1.1E-19 3.9E-24 177.0 27.9 218 88-343 110-364 (376)
25 1czf_A Polygalacturonase II; b 99.9 1.2E-19 3.9E-24 175.4 26.2 202 152-380 89-330 (362)
26 1nhc_A Polygalacturonase I; be 99.9 2.2E-19 7.7E-24 172.1 27.4 216 88-343 69-321 (336)
27 1hg8_A Endopolygalacturonase; 99.9 2.1E-19 7.2E-24 173.0 27.2 218 88-344 70-335 (349)
28 1rmg_A Rgase A, rhamnogalactur 99.8 1.9E-18 6.5E-23 170.3 25.7 196 110-344 127-342 (422)
29 1k5c_A Endopolygalacturonase; 99.8 5E-18 1.7E-22 162.2 23.7 215 88-344 67-318 (335)
30 1ogo_X Dextranase; hydrolase, 99.8 8.4E-18 2.9E-22 170.1 22.6 235 62-343 263-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.8 6.1E-18 2.1E-22 171.1 21.5 250 61-343 220-521 (549)
32 2inu_A Insulin fructotransfera 99.7 7.2E-16 2.5E-20 147.2 17.8 230 27-282 11-283 (410)
33 3gq8_A Preneck appendage prote 99.5 9.9E-12 3.4E-16 125.0 31.5 243 88-371 107-400 (609)
34 3gqn_A Preneck appendage prote 99.5 1.4E-11 4.7E-16 126.0 31.2 243 88-371 107-400 (772)
35 1h80_A IOTA-carrageenase; hydr 99.4 3.8E-12 1.3E-16 125.9 19.2 159 156-352 106-279 (464)
36 2x6w_A Tail spike protein; vir 99.4 4.1E-12 1.4E-16 127.1 19.3 227 88-367 151-408 (600)
37 1ru4_A Pectate lyase, PEL9A; p 99.4 1.4E-11 4.6E-16 120.2 20.9 248 25-311 11-299 (400)
38 2pyg_A Poly(beta-D-mannuronate 99.3 1.3E-10 4.4E-15 113.1 22.9 199 117-352 132-368 (377)
39 1dbg_A Chondroitinase B; beta 99.3 1E-10 3.4E-15 116.8 21.3 206 46-281 30-271 (506)
40 3eqn_A Glucan 1,3-beta-glucosi 99.3 3.7E-11 1.3E-15 122.8 14.7 95 28-130 398-499 (758)
41 1pcl_A Pectate lyase E; lyase 98.9 8.9E-08 3.1E-12 91.5 17.3 76 199-274 132-227 (355)
42 1pxz_A Major pollen allergen J 98.8 1.4E-07 4.7E-12 90.0 17.7 116 152-274 107-226 (346)
43 3zsc_A Pectate trisaccharide-l 98.8 5.3E-07 1.8E-11 85.2 19.6 75 199-273 115-193 (340)
44 1idk_A Pectin lyase A; signal, 98.7 2.7E-07 9.2E-12 88.3 15.7 67 176-242 126-197 (359)
45 3vmv_A Pectate lyase; polysacc 98.7 1.4E-06 4.9E-11 82.0 19.8 139 176-338 97-249 (326)
46 2qy1_A Pectate lyase II; GAG l 98.7 9.2E-07 3.2E-11 83.8 18.6 28 46-75 22-49 (330)
47 3uw0_A Pectinesterase; right-h 98.7 8.8E-07 3E-11 84.7 18.1 206 46-304 43-299 (364)
48 1gq8_A Pectinesterase; hydrola 98.7 4.7E-06 1.6E-10 78.4 22.1 200 46-304 18-243 (319)
49 1xg2_A Pectinesterase 1; prote 98.6 3.2E-06 1.1E-10 79.5 20.7 200 46-304 14-239 (317)
50 1qcx_A Pectin lyase B; beta-he 98.6 1.4E-06 4.8E-11 83.4 17.6 63 180-242 131-197 (359)
51 1pe9_A Pectate lyase A; parall 98.6 8.4E-07 2.9E-11 84.8 15.4 76 199-274 142-238 (361)
52 1pxz_A Major pollen allergen J 98.6 9.2E-07 3.1E-11 84.3 14.9 114 174-301 106-222 (346)
53 3zsc_A Pectate trisaccharide-l 98.6 4.1E-06 1.4E-10 79.2 18.5 152 120-306 63-251 (340)
54 1air_A Pectate lyase C, PELC; 98.5 6E-07 2.1E-11 85.7 11.5 95 175-273 104-214 (353)
55 2qy1_A Pectate lyase II; GAG l 98.5 3.7E-06 1.3E-10 79.7 15.7 143 174-338 86-249 (330)
56 2x3h_A K5 lyase, K5A lyase; ba 98.4 8.6E-05 3E-09 67.4 22.4 183 28-244 62-261 (542)
57 1vbl_A Pectate lyase 47; PL 47 98.4 1.2E-06 4.2E-11 85.2 10.8 101 174-274 148-282 (416)
58 2o04_A Pectate lyase, PL; hexa 98.3 2.3E-06 8E-11 82.8 10.5 100 174-274 143-276 (399)
59 2nsp_A Pectinesterase A; micha 98.2 5.1E-05 1.7E-09 72.1 18.1 84 207-304 138-230 (342)
60 1air_A Pectate lyase C, PELC; 98.2 2.2E-05 7.5E-10 74.9 15.0 140 152-309 104-265 (353)
61 2inu_A Insulin fructotransfera 98.2 2.1E-05 7.3E-10 75.2 14.3 129 159-309 136-280 (410)
62 1idk_A Pectin lyase A; signal, 98.2 5.3E-05 1.8E-09 72.4 16.7 157 120-309 103-284 (359)
63 2o04_A Pectate lyase, PL; hexa 98.1 6E-05 2E-09 72.9 16.1 134 152-304 144-328 (399)
64 1qcx_A Pectin lyase B; beta-he 98.1 8.6E-05 3E-09 71.0 16.8 135 152-308 125-283 (359)
65 3vmv_A Pectate lyase; polysacc 98.1 0.00022 7.6E-09 67.0 18.7 134 153-304 97-249 (326)
66 1vbl_A Pectate lyase 47; PL 47 98.0 6.3E-05 2.1E-09 73.1 12.8 135 152-304 149-333 (416)
67 1pcl_A Pectate lyase E; lyase 98.0 0.00015 5.1E-09 69.1 14.9 137 152-304 97-279 (355)
68 1ru4_A Pectate lyase, PEL9A; p 97.7 0.00015 5E-09 70.6 10.0 109 152-274 109-230 (400)
69 1pe9_A Pectate lyase A; parall 97.5 0.00039 1.3E-08 66.3 9.7 112 152-273 104-259 (361)
70 3grh_A YBHC, acyl-COA thioeste 97.5 0.0049 1.7E-07 59.4 17.2 47 46-95 88-136 (422)
71 2vbk_A Tailspike-protein; vira 97.0 0.0018 6.1E-08 62.2 8.8 120 88-245 147-286 (514)
72 1xg2_A Pectinesterase 1; prote 96.9 0.039 1.3E-06 51.6 16.2 115 176-305 85-206 (317)
73 3t9g_A Pectate lyase; PL3, par 96.8 0.14 4.8E-06 43.4 17.5 127 184-340 54-183 (196)
74 1gq8_A Pectinesterase; hydrola 96.8 0.035 1.2E-06 52.0 15.4 115 176-305 89-210 (319)
75 3t9g_A Pectate lyase; PL3, par 96.4 0.26 8.8E-06 41.8 16.5 132 158-305 51-182 (196)
76 1ee6_A Pectate lyase; parallel 96.2 0.31 1.1E-05 41.5 15.8 106 159-274 48-153 (197)
77 3b4n_A Endo-pectate lyase; pec 96.0 0.41 1.4E-05 44.2 16.9 89 120-220 124-213 (344)
78 1dbg_A Chondroitinase B; beta 95.7 0.073 2.5E-06 53.0 11.7 141 157-305 226-392 (506)
79 1ee6_A Pectate lyase; parallel 95.7 0.24 8.1E-06 42.2 13.0 110 182-311 48-160 (197)
80 3uw0_A Pectinesterase; right-h 94.9 0.33 1.1E-05 46.2 12.7 114 179-304 119-255 (364)
81 2nsp_A Pectinesterase A; micha 93.1 1.6 5.4E-05 41.1 13.7 206 46-304 17-275 (342)
82 3b4n_A Endo-pectate lyase; pec 90.8 1.7 5.9E-05 40.1 10.5 128 183-337 159-300 (344)
83 3ju4_A Endo-N-acetylneuraminid 87.4 0.24 8.1E-06 47.2 2.2 39 36-78 4-43 (670)
84 2vfm_A Bifunctional tail prote 80.0 14 0.00046 34.4 10.4 81 208-304 269-373 (559)
85 2v5i_A Salmonella typhimurium 79.4 13 0.00046 34.5 10.2 82 208-305 272-377 (559)
86 3grh_A YBHC, acyl-COA thioeste 75.5 50 0.0017 31.7 13.5 18 154-171 196-213 (422)
87 2xc1_A Bifunctional tail prote 75.3 20 0.00069 34.7 10.4 81 208-304 376-480 (666)
88 3riq_A Tailspike protein; righ 69.6 18 0.00062 34.3 8.5 15 151-165 146-160 (543)
89 2x3h_A K5 lyase, K5A lyase; ba 57.8 38 0.0013 30.9 8.1 44 261-310 141-185 (542)
90 2vfm_A Bifunctional tail prote 49.8 1.1E+02 0.0039 28.3 10.0 69 231-302 269-354 (559)
91 2xc1_A Bifunctional tail prote 38.1 1.9E+02 0.0065 28.1 9.8 69 231-302 376-461 (666)
92 2yuh_A Tubulin-specific chaper 35.5 41 0.0014 28.1 4.5 11 153-163 71-81 (179)
93 2v5i_A Salmonella typhimurium 26.2 1.6E+02 0.0056 27.3 7.0 69 231-302 272-357 (559)
94 1ydy_A Glycerophosphoryl diest 25.1 46 0.0016 31.0 3.4 56 1-56 1-57 (356)
95 4dz1_A DALS D-alanine transpor 23.4 27 0.00091 30.2 1.3 11 23-33 23-33 (259)
96 3bh7_B Protein XRP2; protein-p 22.6 1.7E+02 0.0058 27.2 6.7 9 153-161 83-91 (352)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=2.2e-63 Score=492.86 Aligned_cols=338 Identities=24% Similarity=0.369 Sum_probs=297.1
Q ss_pred CCCCCCeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccccccCcccCccEEEEEcCEEEeecc
Q 045402 23 PSAATSSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLLGSVAFKGECQSSDITFQIDGTLVAPAD 102 (396)
Q Consensus 23 ~~~~~~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G~l~~~~~ 102 (396)
.+..+++.++|++|||++||++|||+|||+||++ |++.+|++|+||+|+|+++++.|+ | +++|+++|+|+++.+
T Consensus 20 ~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~-c~~~ggg~v~vP~G~yl~~~l~l~----s-~v~l~l~gtL~~s~d 93 (448)
T 3jur_A 20 EPQIPDREVNLLDFGARGDGRTDCSESFKRAIEE-LSKQGGGRLIVPEGVFLTGPIHLK----S-NIELHVKGTIKFIPD 93 (448)
T ss_dssp CCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHHH-HHHHTCEEEEECSSEEEESCEECC----T-TEEEEESSEEEECCC
T ss_pred CCCCCCcEEEEEecccCCCCCeecHHHHHHHHHh-hhhcCCeEEEECCCcEEEeeeEeC----C-CcEEEEEEEEEecCC
Confidence 3445678999999999999999999999999975 676788999999999999999998 7 999999999999999
Q ss_pred cccc-CCC------------cceEEEeceeceEEec-eeEeCCC--Cccccccccc------------------------
Q 045402 103 YRVL-GQA------------DNWLSFEGVSGVSIIG-GALDAKG--TSLWACKAAA------------------------ 142 (396)
Q Consensus 103 ~~~~-~~~------------~~~i~~~~~~nv~I~G-G~idg~g--~~~~~~~~~~------------------------ 142 (396)
+.+| +.. .+||.+.+.+||+|+| |+|||+| +.||+.....
T Consensus 94 ~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 173 (448)
T 3jur_A 94 PERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAER 173 (448)
T ss_dssp GGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHH
T ss_pred HHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcc
Confidence 9888 321 3689999999999999 9999999 8899743210
Q ss_pred ---------CCCCCCCceeEEEEeecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEE
Q 045402 143 ---------GTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKI 213 (396)
Q Consensus 143 ---------~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I 213 (396)
+.....||++|.|.+|+|++|+|++++++|.|++++..|+||+|++++|.++ .+|+|||++.+|+||+|
T Consensus 174 ~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 174 GTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLI 251 (448)
T ss_dssp TCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEE
T ss_pred cCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEE
Confidence 0123468999999999999999999999999999999999999999999986 57999999999999999
Q ss_pred EccEEecCCceEEecCC-----------CeeEEEEeeee--cCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCeEEE
Q 045402 214 RSSSIKTGDDCISIGRG-----------TNNLWIERVTC--GPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLR 279 (396)
Q Consensus 214 ~n~~i~~~dD~i~~~~~-----------s~ni~i~n~~~--~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~ 279 (396)
+||++.++||||+++++ ++||+|+||+| ..+| |++|||++ .+.++||+|+||+|.++.+|++
T Consensus 252 ~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~Gir 327 (448)
T 3jur_A 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERALR 327 (448)
T ss_dssp ESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEEEE
T ss_pred EeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccceEE
Confidence 99999999999999987 79999999999 5566 79999973 5689999999999999999999
Q ss_pred EEeecCCCCceEEeEEEEeEEEecCCccE-EEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCCCceEEEecCCCCce
Q 045402 280 IKSWARPSNGFVKGVRFIDAVMQNVQNPI-IIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNCSAKYPC 358 (396)
Q Consensus 280 i~~~~~~~~g~v~nI~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~~~~~~i 358 (396)
||++.+ ++|.|+||+|+||+|+++.+++ .|++.|+.. + +...+.|+||+|+||+++. ...++.+.|.+..||
T Consensus 328 IKt~~g-~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~---~--~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~ 400 (448)
T 3jur_A 328 LKTNSR-RGGYMENIFFIDNVAVNVSEEVIRINLRYDNE---E--GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYV 400 (448)
T ss_dssp EECCTT-TCSEEEEEEEESCEEEEESSEEEEEESCGGGC---C--CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCE
T ss_pred EEEEcC-CCceEeeEEEEEEEEECCccccEEEEeeccCC---C--CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCE
Confidence 999976 6799999999999999999988 999988753 1 2234689999999999998 466999999999999
Q ss_pred ecEEEEeEEEEeCCcccceeeec
Q 045402 359 EGIRLYKVNLSYLKLVAQSSCNN 381 (396)
Q Consensus 359 ~~i~~~ni~i~~~~~~~~~~c~~ 381 (396)
+||+|+||+++..+ ....|.+
T Consensus 401 ~~I~~~nv~i~~~~--~~~~~~~ 421 (448)
T 3jur_A 401 KDILISDTIIEGAK--ISVLLEF 421 (448)
T ss_dssp EEEEEEEEEEESCS--EEEEEEE
T ss_pred eeEEEEEEEEEccc--cceeEec
Confidence 99999999998543 2345665
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.1e-59 Score=464.56 Aligned_cols=330 Identities=24% Similarity=0.421 Sum_probs=288.2
Q ss_pred CeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEecc-ccccCcccCccEEEEEcCEEEeecccccc
Q 045402 28 SSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLLGS-VAFKGECQSSDITFQIDGTLVAPADYRVL 106 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~-i~l~~~~~s~~v~l~~~G~l~~~~~~~~~ 106 (396)
.+.++|++|||++||++|||+|||+||+ +|+ +|++|+||+|+|++++ |.|+++ + +++|+++|+++...+..
T Consensus 18 ~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~--~g~~V~vP~G~Yli~~~l~l~g~--s-~v~l~l~G~~l~~~~~~-- 89 (422)
T 1rmg_A 18 TKTCNILSYGAVADNSTDVGPAITSAWA-ACK--SGGLVYIPSGNYALNTWVTLTGG--S-ATAIQLDGIIYRTGTAS-- 89 (422)
T ss_dssp HCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT--BTCEEEECSSEEEECSCEEEESC--E-EEEEEECSEEEECCCCS--
T ss_pred CcEEEeeeccccCCCCcccHHHHHHHHH-HCC--CCCEEEECCCeEEeCCceeecCC--C-eEEEEEcCcEEcccCCC--
Confidence 5689999999999999999999999998 565 4889999999999986 999975 6 89999999877654321
Q ss_pred CCCcceEEE---eceeceEEec-eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEecee
Q 045402 107 GQADNWLSF---EGVSGVSIIG-GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQ 182 (396)
Q Consensus 107 ~~~~~~i~~---~~~~nv~I~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~ 182 (396)
+.|+.+ .+.+++.|+| |+|||+|..||.. . ..+|.+|.+.+|+|++|+|+++++++.|++++..|+
T Consensus 90 ---~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~------~-~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~ 159 (422)
T 1rmg_A 90 ---GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAE------G-TYGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCS 159 (422)
T ss_dssp ---SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTT------T-CCCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEE
T ss_pred ---CceEEEEecCceeEEeeccCEEEECCcchhhcC------C-CCCceEEEEcccceEEEECeEEECCCceEEEEeCcC
Confidence 334444 5566667789 9999999999962 1 238999999999999999999999999999999999
Q ss_pred cEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCCCEE
Q 045402 183 DVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQ 262 (396)
Q Consensus 183 nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ 262 (396)
||+|+|++|.+ .+.+++|||++.+ +||+|+||++.++||||+++++++||+|+||+|..+||++|||++.+ +.++
T Consensus 160 nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~v~ 234 (422)
T 1rmg_A 160 DGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TDVT 234 (422)
T ss_dssp EEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EEEE
T ss_pred CEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---CcEE
Confidence 99999999999 4557999999999 99999999999999999999999999999999999999999998643 4799
Q ss_pred EEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEec
Q 045402 263 NVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTS 342 (396)
Q Consensus 263 ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~ 342 (396)
||+|+||+|.++.+|++||++. +.|.++||+|+||+++++.+++.|++.|+... ......+.|+||+|+||+++.
T Consensus 235 nV~v~n~~~~~~~~Gi~Ikt~~--g~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~---~~~~~~~~i~nI~~~nI~gt~ 309 (422)
T 1rmg_A 235 DIVYRNVYTWSSNQMYMIKSNG--GSGTVSNVLLENFIGHGNAYSLDIDGYWSSMT---AVAGDGVQLNNITVKNWKGTE 309 (422)
T ss_dssp EEEEEEEEEESSSCSEEEEEBB--CCEEEEEEEEEEEEEEEESCSEEEETBCTTSC---CBSSSCCEEEEEEEEEEEEEE
T ss_pred EEEEEeEEEeccceEEEEEecC--CCcEEEEEEEEeEEEECccccEEEEeeccCCC---cccCCCceEEEEEEEeEEEEe
Confidence 9999999999999999999974 45899999999999999999999999886531 123456799999999999997
Q ss_pred CC---CceEEEecCCCCceecEEEEeEEEEeCC-cccceeeeccccc
Q 045402 343 ST---PIAIKFNCSAKYPCEGIRLYKVNLSYLK-LVAQSSCNNVIGK 385 (396)
Q Consensus 343 ~~---~~~~~i~~~~~~~i~~i~~~ni~i~~~~-~~~~~~c~~v~~~ 385 (396)
.. ..++.+.|.+..+|+||+|+||++...+ +.+.+.|.|+++.
T Consensus 310 ~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~ 356 (422)
T 1rmg_A 310 ANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGS 356 (422)
T ss_dssp SCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEE
T ss_pred cccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCcc
Confidence 43 4589999999999999999999999876 4567899999875
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=1.2e-57 Score=445.54 Aligned_cols=327 Identities=30% Similarity=0.413 Sum_probs=286.1
Q ss_pred eeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcC---cEEEeccccccCcccCccEEEEEcC--EEEeeccc
Q 045402 29 SVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPK---GRYLLGSVAFKGECQSSDITFQIDG--TLVAPADY 103 (396)
Q Consensus 29 ~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~---G~Y~~~~i~l~~~~~s~~v~l~~~G--~l~~~~~~ 103 (396)
..++|++|| .+|||+|||+||+ +|++ |++|+||+ |+|+++++.|+ | +++|++++ +|+++.++
T Consensus 13 ~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g~yl~g~i~l~----s-~vtL~l~~Ga~L~~s~~~ 79 (376)
T 1bhe_A 13 SSCTTLKAD-----SSTATSTIQKALN-NCDQ--GKAVRLSAGSTSVFLSGPLSLP----S-GVSLLIDKGVTLRAVNNA 79 (376)
T ss_dssp CEEEEEECC-----SSBCHHHHHHHHT-TCCT--TCEEEEECSSSSEEEESCEECC----T-TCEEEECTTCEEEECSCS
T ss_pred CeEEECCCC-----CCccHHHHHHHHH-Hhcc--CCcEEEECCCCceEEEeEEEEC----C-CCEEEECCCeEEEeCCCH
Confidence 469999986 4799999999998 5664 56676665 79999999998 7 99999985 99999988
Q ss_pred cccCCC--------------cceEEEeceeceEEec-eeEeCCC--------Cccccccccc--CCCCCCCceeEEEEee
Q 045402 104 RVLGQA--------------DNWLSFEGVSGVSIIG-GALDAKG--------TSLWACKAAA--GTTCPNGATTLSITNS 158 (396)
Q Consensus 104 ~~~~~~--------------~~~i~~~~~~nv~I~G-G~idg~g--------~~~~~~~~~~--~~~~~~~~~~i~~~~~ 158 (396)
..|+.. .+||.+.+.+||+|+| |+|||+| +.||+..... ......+|++|.|.+|
T Consensus 80 ~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~ 159 (376)
T 1bhe_A 80 KSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKS 159 (376)
T ss_dssp GGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESC
T ss_pred HHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcc
Confidence 888642 3689999999999999 9999999 4788742110 0112357999999999
Q ss_pred cceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecC-----CCee
Q 045402 159 NNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGR-----GTNN 233 (396)
Q Consensus 159 ~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~-----~s~n 233 (396)
+|++|+|++++++|.|++++..|++++|++++|.++.+.+|+|||++.+|+||+|+||+|.++||||++++ +++|
T Consensus 160 ~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~n 239 (376)
T 1bhe_A 160 KNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRN 239 (376)
T ss_dssp EEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEE
T ss_pred eEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceE
Confidence 99999999999999999999999999999999999888899999999999999999999999999999995 6999
Q ss_pred EEEEeeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCCccEEEEee
Q 045402 234 LWIERVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQNPIIIDQN 313 (396)
Q Consensus 234 i~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~ 313 (396)
|+|+||+|..+||++|||+. ..++||+|+||+|.++.+|++||+|.+ ++|.|+||+|+||+|+++.+||.|++.
T Consensus 240 I~I~n~~~~~ghGisiGSe~-----~~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~ni~f~ni~~~~v~~~i~i~~~ 313 (376)
T 1bhe_A 240 ISILHNDFGTGHGMSIGSET-----MGVYNVTVDDLKMNGTTNGLRIKSDKS-AAGVVNGVRYSNVVMKNVAKPIVIDTV 313 (376)
T ss_dssp EEEEEEEECSSSCEEEEEEE-----SSEEEEEEEEEEEESCSEEEEEECCTT-TCCEEEEEEEEEEEEESCSEEEEEETT
T ss_pred EEEEeeEEEccccEEeccCC-----ccEeeEEEEeeEEeCCCcEEEEEEecC-CCceEeeEEEEeEEEeCCCceEEEEee
Confidence 99999999999999999973 289999999999999999999999977 789999999999999999999999998
Q ss_pred cCCCCCCCCCCCcceEEEeEEEEeEEEecCCCceEEEecCCCCceecEEEEeEEEEeCCcccceeeecccc
Q 045402 314 YCPHNLNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNCSAKYPCEGIRLYKVNLSYLKLVAQSSCNNVIG 384 (396)
Q Consensus 314 ~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~~~~~~i~~i~~~ni~i~~~~~~~~~~c~~v~~ 384 (396)
|+... +...+.|+||+|+||+++... ++.+.|.++.||++|+|+||++... ..+.|+||..
T Consensus 314 y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~---~~~~~~~~~~ 374 (376)
T 1bhe_A 314 YEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSD---STWQIKNVNV 374 (376)
T ss_dssp SSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTT---CEEEEESEEE
T ss_pred ccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecC---CCceEEEEEe
Confidence 87631 223458999999999999754 7899999999999999999999754 4589999864
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1e-57 Score=441.76 Aligned_cols=322 Identities=23% Similarity=0.385 Sum_probs=278.4
Q ss_pred CeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccc-cccCcccCccEEEEEcCEEEeecccccc
Q 045402 28 SSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLLGSV-AFKGECQSSDITFQIDGTLVAPADYRVL 106 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i-~l~~~~~s~~v~l~~~G~l~~~~~~~~~ 106 (396)
.++++|++ ++|||+|+++ |+..++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|
T Consensus 27 ~~~Ctv~~-----------~~aiq~ai~~-c~~~~g~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w 85 (362)
T 1czf_A 27 RDSCTFTT-----------AAAAKAGKAK-CSTITLNNIEVPAGTTLD--LTGLT----S-GTKVIFEGTTTF--QYEEW 85 (362)
T ss_dssp -CEEEESS-----------HHHHHHHGGG-CSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCS
T ss_pred CCEEEECC-----------HHHHHHHHHH-hhccCCCEEEECCCEEEE--eeccC----C-CeEEEEeCcEEe--ccccC
Confidence 35688855 7899999964 777778999999999973 3 444 6 899999998876 35667
Q ss_pred CCCcceEEEeceeceEEec---eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEeceec
Q 045402 107 GQADNWLSFEGVSGVSIIG---GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQD 183 (396)
Q Consensus 107 ~~~~~~i~~~~~~nv~I~G---G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~n 183 (396)
. ++|+.+. .+||+|+| |+|||+|+.||+.... +...||+++.+.+|+|++|+|++++++|.|++++. |+|
T Consensus 86 ~--g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~---~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~n 158 (362)
T 1czf_A 86 A--GPLISMS-GEHITVTGASGHLINCDGARWWDGKGT---SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-AND 158 (362)
T ss_dssp C--CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTT---SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSS
T ss_pred C--CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCC---CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCC
Confidence 6 5688885 59999999 8999999999986432 24668999999999999999999999999999999 999
Q ss_pred EEEEeEEEEcCC-C---CCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCC
Q 045402 184 VLVEGAKIIAAG-D---SPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEE 259 (396)
Q Consensus 184 v~I~~~~i~~~~-~---~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~ 259 (396)
|+|+|++|.++. + .+|+|||++.+|+||+|+||++.++||||++++ .+||+|+||+|..+||++|||+|.+ +.+
T Consensus 159 v~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~ 236 (362)
T 1czf_A 159 ITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGSVGDR-SNN 236 (362)
T ss_dssp EEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEECSS-SCC
T ss_pred EEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEeecccc-CCC
Confidence 999999999963 3 689999999999999999999999999999999 5999999999999999999998766 457
Q ss_pred CEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeE
Q 045402 260 GVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQ-NPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNI 338 (396)
Q Consensus 260 ~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni 338 (396)
.++||+|+||+|.++.+|++||+|.+ +.|.|+||+|+||+++++. +|+.|++.|+... .+..+...++|+||+|+||
T Consensus 237 ~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i~nI~~~ni 314 (362)
T 1czf_A 237 VVKNVTIEHSTVSNSENAVRIKTISG-ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTIQDVKLESV 314 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEEEEEEEEEE
T ss_pred CEEEEEEEeeEEECCceEEEEEEeCC-CCceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceEEEEEEEEE
Confidence 89999999999999999999999977 6799999999999999997 7999999887631 1112234579999999999
Q ss_pred EEecCC-CceEEEecCCCCceecEEEEeEEEEeCCcccceeeecccc
Q 045402 339 RGTSST-PIAIKFNCSAKYPCEGIRLYKVNLSYLKLVAQSSCNNVIG 384 (396)
Q Consensus 339 ~~~~~~-~~~~~i~~~~~~~i~~i~~~ni~i~~~~~~~~~~c~~v~~ 384 (396)
+++... ..++.+.|. ..||+||+|+||+++. +.+...|+|++.
T Consensus 315 ~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 358 (362)
T 1czf_A 315 TGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTG--GKKSTACKNFPS 358 (362)
T ss_dssp EEEECTTSEEEEEECC-TTTEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred EEEecCCceEEEEEeC-CCcCcCEEEEeEEEEc--CCCcccCcCCCC
Confidence 999875 568999997 7899999999999984 345678999984
No 5
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=2.3e-55 Score=452.25 Aligned_cols=332 Identities=23% Similarity=0.342 Sum_probs=270.8
Q ss_pred CCCeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccccccCcccCccEEEEEc--CEEEeeccc
Q 045402 26 ATSSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLLGSVAFKGECQSSDITFQID--GTLVAPADY 103 (396)
Q Consensus 26 ~~~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~--G~l~~~~~~ 103 (396)
++++.++|++|||++||++|||+|||+||+ +|+. |++|+||+|+|+++++.|+ | +++|+++ ++|+++.++
T Consensus 152 ~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G~y~~g~i~lk----s-~v~L~l~~gatL~~s~d~ 223 (608)
T 2uvf_A 152 AKPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAGTYKSGALWLK----S-DMTLNLQAGAILLGSENP 223 (608)
T ss_dssp CCCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSEEEEECCEECC----S-SEEEEECTTEEEEECSCG
T ss_pred cCCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCCceEecceecc----C-ceEEEecCCcEEEecCCH
Confidence 456789999999999999999999999997 5664 8999999999999999998 7 9999995 599999988
Q ss_pred cccCCC------------cceEEEec--------eeceEEec-eeEeCCCCccccccc---c-c----------------
Q 045402 104 RVLGQA------------DNWLSFEG--------VSGVSIIG-GALDAKGTSLWACKA---A-A---------------- 142 (396)
Q Consensus 104 ~~~~~~------------~~~i~~~~--------~~nv~I~G-G~idg~g~~~~~~~~---~-~---------------- 142 (396)
.+|+.. .++|.+.+ .+||+|+| |+|||+|..||.... . +
T Consensus 224 ~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~ 303 (608)
T 2uvf_A 224 DDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVHE 303 (608)
T ss_dssp GGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHHH
T ss_pred HHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccccccc
Confidence 777631 24777776 69999999 999999998874310 0 0
Q ss_pred ---------------CCC-----CCCCceeEEEEeecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCCCCCCCc
Q 045402 143 ---------------GTT-----CPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDG 202 (396)
Q Consensus 143 ---------------~~~-----~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DG 202 (396)
+.. ...||.+|.|.+|+|++|+|+++++++.|++++..|+|++|++++|.. .+.+|+||
T Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDG 382 (608)
T 2uvf_A 304 DGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDG 382 (608)
T ss_dssp HBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCS
T ss_pred cccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCe
Confidence 000 114899999999999999999999999999999999999999999875 45689999
Q ss_pred eeeecceeEEEEccEEecCCceEEecCC----------CeeEEEEeeeecCCce-EEEEeccccCCCCCEEEEEEEeeEE
Q 045402 203 IHIQQSRNVKIRSSSIKTGDDCISIGRG----------TNNLWIERVTCGPGHG-ISIGSLGKDMDEEGVQNVTVWKTVF 271 (396)
Q Consensus 203 i~~~~s~nv~I~n~~i~~~dD~i~~~~~----------s~ni~i~n~~~~~~~g-i~igs~~~~~~~~~i~ni~i~n~~~ 271 (396)
|++.+|+||+|+||+|.++||||+++++ ++||+|+||+|.++|| +.|||+ ..+.++||+|+||+|
T Consensus 383 idi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~ 458 (608)
T 2uvf_A 383 IEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVM 458 (608)
T ss_dssp EEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEE
T ss_pred EEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEE
Confidence 9999999999999999999999999875 7999999999999998 568985 467899999999999
Q ss_pred ecCCeEEEEEeecCCCCceEEeEEEEeEEEecC-CccEEEEeecCCCCCC-C-CCCCcceEEEeEEEEeEEEecCCC--c
Q 045402 272 TGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNV-QNPIIIDQNYCPHNLN-C-PGQVSGVKISDIIYWNIRGTSSTP--I 346 (396)
Q Consensus 272 ~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~~-~-~~~~~~~~i~ni~~~ni~~~~~~~--~ 346 (396)
.++.+|++||++.+ ++|.|+||+|+|++|+++ .+||.|++.|+..... . ........++||+|+||+.+.... .
T Consensus 459 ~~t~~GirIKt~~g-~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~ 537 (608)
T 2uvf_A 459 YLTDIGLRAKSTST-IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNP 537 (608)
T ss_dssp ESCSEEEEEEEETT-TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSC
T ss_pred ECCCceEEEeeecC-CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEE
Confidence 99999999999976 679999999999999999 5999999999864320 0 000112345666666665544221 2
Q ss_pred eEEEe--cCCCCceecEEEEeEEEEeC
Q 045402 347 AIKFN--CSAKYPCEGIRLYKVNLSYL 371 (396)
Q Consensus 347 ~~~i~--~~~~~~i~~i~~~ni~i~~~ 371 (396)
++.+. |.+..||+||+|+||++...
T Consensus 538 ~i~i~g~~~~~~p~~ni~~~nv~i~~~ 564 (608)
T 2uvf_A 538 SIEIKGDTANKAWHRLVHVNNVQLNNV 564 (608)
T ss_dssp SEEEECBGGGTBCEEEEEEEEEEEESC
T ss_pred eEEEEEEcCCCCccccEEEEeEEEEcc
Confidence 44444 44456788888888887654
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.2e-55 Score=423.06 Aligned_cols=318 Identities=26% Similarity=0.422 Sum_probs=275.5
Q ss_pred ccHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccc-cccCcccCccEEEEEcCEEEeeccccccCCCcceEEEeceeceEE
Q 045402 45 DSTEAFAKAWAAACASNESTIIYVPKGRYLLGSV-AFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSGVSI 123 (396)
Q Consensus 45 ddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I 123 (396)
.||+|||+|+++ |++.++++|+||+|+|+. + .|+ + +++|+++|.+.+ ++..|. ++|+.+.+ +||+|
T Consensus 6 ~dt~aiq~ai~~-c~~~~g~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~~i~~~~-~nv~I 72 (339)
T 2iq7_A 6 TDAAAAIKGKAS-CTSIILNGIVVPAGTTLD--MTGLK----S-GTTVTFQGKTTF--GYKEWE--GPLISFSG-TNINI 72 (339)
T ss_dssp SCHHHHHHHGGG-CSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEE
T ss_pred CCHHHHHHHHHH-hhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--cccccc--CcEEEEEc-ccEEE
Confidence 589999999975 787778899999999974 3 444 6 899999998876 356676 56888865 99999
Q ss_pred ec---eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCC----
Q 045402 124 IG---GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGD---- 196 (396)
Q Consensus 124 ~G---G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~---- 196 (396)
+| |+|||+|+.||+.... .....||+++.+.+|+|++|++++++++|.|++++..|++|+|++++|.++.+
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~--~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~ 150 (339)
T 2iq7_A 73 NGASGHSIDCQGSRWWDSKGS--NGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAG 150 (339)
T ss_dssp EECTTCEEECCGGGTCCSCGG--GSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTT
T ss_pred EcCCCCEEECCcccccccccc--cCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcccccc
Confidence 99 6999999999986432 12456899999999999999999999999999999999999999999998743
Q ss_pred CCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCe
Q 045402 197 SPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQN 276 (396)
Q Consensus 197 ~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~ 276 (396)
.+++|||++.+|+||+|+||++.++||||++++ .+||+|+||+|..+||++|||++.+ ..+.++||+|+||+|.++.+
T Consensus 151 ~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~ 228 (339)
T 2iq7_A 151 GHNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDN 228 (339)
T ss_dssp CCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCc
Confidence 689999999999999999999999999999999 6999999999999999999998776 35789999999999999999
Q ss_pred EEEEEeecCCCCceEEeEEEEeEEEecCCc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC-CceEEEecCC
Q 045402 277 GLRIKSWARPSNGFVKGVRFIDAVMQNVQN-PIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST-PIAIKFNCSA 354 (396)
Q Consensus 277 gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~-~~~~~i~~~~ 354 (396)
|++||+|.+ +.|.++||+|+||+|+++.. |+.|++.|+... .+..+...++|+||+|+||+++... ..++.+.|+
T Consensus 229 girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~- 305 (339)
T 2iq7_A 229 GVRIKTVSG-ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVPITGLTLSKITGSVASSGTNVYILCA- 305 (339)
T ss_dssp EEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-
T ss_pred EEEEEEeCC-CCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeC-
Confidence 999999977 67999999999999999885 999999887631 1112233578999999999999876 578999995
Q ss_pred CCceecEEEEeEEEEeCCcccceeeecccc
Q 045402 355 KYPCEGIRLYKVNLSYLKLVAQSSCNNVIG 384 (396)
Q Consensus 355 ~~~i~~i~~~ni~i~~~~~~~~~~c~~v~~ 384 (396)
..||+||+|+||++.. +.+...|.|++.
T Consensus 306 ~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 333 (339)
T 2iq7_A 306 SGACSNWKWSGVSVTG--GKKSTKCSNIPS 333 (339)
T ss_dssp TTCEEEEEEEEEEEES--SBCCSCCBCCCT
T ss_pred CCcEecEEEEeEEEEc--CCCcccccCCCC
Confidence 8899999999999984 345678999984
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=2.3e-55 Score=422.42 Aligned_cols=317 Identities=24% Similarity=0.406 Sum_probs=274.8
Q ss_pred ccHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccc-cccCcccCccEEEEEcCEEEeeccccccCCCcceEEEeceeceEE
Q 045402 45 DSTEAFAKAWAAACASNESTIIYVPKGRYLLGSV-AFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSGVSI 123 (396)
Q Consensus 45 ddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I 123 (396)
.||+|||+|+++ |++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+. .+||+|
T Consensus 6 ~~t~aiq~ai~~-c~~~gg~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~li~~~-~~nv~I 72 (336)
T 1nhc_A 6 TSASEASESISS-CSDVVLSSIEVPAGETLD--LSDAA----D-GSTITFEGTTSF--GYKEWK--GPLIRFG-GKDLTV 72 (336)
T ss_dssp SSHHHHHHHGGG-CSEEEEESCEECTTCCEE--CTTCC----T-TCEEEEESEEEE--CCCCSC--CCSEECC-EESCEE
T ss_pred CCHHHHHHHHHH-hhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeceEEc--cccccc--CcEEEEe-cCCEEE
Confidence 689999999974 787778899999999973 3 444 5 899999998876 356676 4688875 599999
Q ss_pred ec---eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCC----
Q 045402 124 IG---GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGD---- 196 (396)
Q Consensus 124 ~G---G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~---- 196 (396)
+| |+|||+|+.||+.... .....||+++.+.+|+|++|++++++++|.|++++. |++++|++++|.++.+
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~--~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~ 149 (336)
T 1nhc_A 73 TMADGAVIDGDGSRWWDSKGT--NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNG 149 (336)
T ss_dssp EECTTCEEECCGGGTCCSCTT--TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHT
T ss_pred EcCCCeEEECCccccccccCc--CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCccccc
Confidence 99 6999999999985432 224568999999999999999999999999999999 9999999999999753
Q ss_pred CCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCe
Q 045402 197 SPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQN 276 (396)
Q Consensus 197 ~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~ 276 (396)
++++|||++.+|+||+|+||++.++||||++++ .+||+|+||+|..+||++|||++.+ ..+.++||+|+||+|.++.+
T Consensus 150 ~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~ 227 (336)
T 1nhc_A 150 GHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSAN 227 (336)
T ss_dssp CCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCc
Confidence 689999999999999999999999999999999 6999999999999999999998776 35789999999999999999
Q ss_pred EEEEEeecCCCCceEEeEEEEeEEEecCCc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC-CceEEEecCC
Q 045402 277 GLRIKSWARPSNGFVKGVRFIDAVMQNVQN-PIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST-PIAIKFNCSA 354 (396)
Q Consensus 277 gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~-~~~~~i~~~~ 354 (396)
|++||+|.+ +.|.++||+|+||+|+++.. |+.|++.|+... .+..+...++|+||+|+||+++... ..++.+.|+
T Consensus 228 girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~- 304 (336)
T 1nhc_A 228 GVRIKTIYK-ETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCG- 304 (336)
T ss_dssp EEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECC-
T ss_pred EEEEEEECC-CCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcC-
Confidence 999999976 68999999999999999975 999999987631 1112233578999999999999876 578999995
Q ss_pred CCceecEEEEeEEEEeCCcccceeeecccc
Q 045402 355 KYPCEGIRLYKVNLSYLKLVAQSSCNNVIG 384 (396)
Q Consensus 355 ~~~i~~i~~~ni~i~~~~~~~~~~c~~v~~ 384 (396)
..||+||+|+||+++. +.+...|+|++.
T Consensus 305 ~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 332 (336)
T 1nhc_A 305 DGSCSDWTWSGVDLSG--GKTSDKCENVPS 332 (336)
T ss_dssp TTCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CCcEecEEEEeEEEEc--CCCCcccCCCCC
Confidence 8899999999999985 345678999985
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1e-54 Score=419.49 Aligned_cols=319 Identities=24% Similarity=0.378 Sum_probs=274.1
Q ss_pred ccHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccc-cccCcccCccEEEEEcCEEEeeccccccCCCcceEEEeceeceEE
Q 045402 45 DSTEAFAKAWAAACASNESTIIYVPKGRYLLGSV-AFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSGVSI 123 (396)
Q Consensus 45 ddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I 123 (396)
.||+|||+|+++ |+..++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|.. ++||.+. .+||+|
T Consensus 6 ~~t~aiq~ai~~-c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~~-g~~i~~~-~~ni~I 73 (349)
T 1hg8_A 6 TEYSGLATAVSS-CKNIVLNGFQVPTGKQLD--LSSLQ----N-DSTVTFKGTTTF--ATTADND-FNPIVIS-GSNITI 73 (349)
T ss_dssp SSGGGHHHHHHH-CSEEEECCCEECTTCCEE--ETTCC----T-TCEEEECSEEEE--CCCCCTT-CCSEEEE-EESCEE
T ss_pred CCHHHHHHHHHh-ccccCCCEEEECCCEEEE--eeccC----C-CeEEEEcCceec--ccccccC-CceEEEE-CccEEE
Confidence 378999999975 777778899999999984 3 344 6 899999998876 3456622 5788886 499999
Q ss_pred ec---eeEeCCCCcccccccccCCCCC-CCceeEEE-E-eecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCC-C
Q 045402 124 IG---GALDAKGTSLWACKAAAGTTCP-NGATTLSI-T-NSNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAG-D 196 (396)
Q Consensus 124 ~G---G~idg~g~~~~~~~~~~~~~~~-~~~~~i~~-~-~~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~-~ 196 (396)
+| |+|||+|+.||+.... .... .+|++|.| . .|+|++|++++++++|.|++++..|++|+|++++|.++. +
T Consensus 74 ~G~~~G~IdG~G~~ww~~~~~--~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~ 151 (349)
T 1hg8_A 74 TGASGHVIDGNGQAYWDGKGS--NSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGD 151 (349)
T ss_dssp EECTTCEEECCGGGTCCSCTT--CTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGS
T ss_pred EecCCCEEcCCcchhhhcccc--cCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCc
Confidence 99 8999999999986432 1122 58999999 7 788999999999999999999999999999999999852 2
Q ss_pred -----------CCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCCCEEEEE
Q 045402 197 -----------SPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQNVT 265 (396)
Q Consensus 197 -----------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~ 265 (396)
.+|+|||++.+|+||+|+||++.++||||++++ ++||+|+||+|..+||++|||+|.+ ..+.++||+
T Consensus 152 ~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~ 229 (349)
T 1hg8_A 152 KPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQ 229 (349)
T ss_dssp SCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEE
T ss_pred cccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEE
Confidence 489999999999999999999999999999999 6999999999999999999999876 457899999
Q ss_pred EEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC
Q 045402 266 VWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQ-NPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST 344 (396)
Q Consensus 266 i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~ 344 (396)
|+||+|.++.+|++||++.+ +.|.|+||+|+||+|+++. +|+.|++.|+... .+..+...+.|+||+|+||+++...
T Consensus 230 v~n~~~~~~~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~~~~p~~~~~i~~I~~~ni~gt~~~ 307 (349)
T 1hg8_A 230 FLSSQVVNSQNGCRIKSNSG-ATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-PTGKPTNGVKISNIKFIKVTGTVAS 307 (349)
T ss_dssp EEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-BCSCCCSSEEEEEEEEEEEEEEECT
T ss_pred EEEEEEECCCcEEEEEecCC-CCccccceEEEEEEEEccccccEEEEeeccCCC-CCCcccCCceEEEEEEEeEEEEeCC
Confidence 99999999999999999977 6799999999999999997 7999999988632 1222334579999999999999876
Q ss_pred -CceEEEecCCCCceecEEEEeEEEEeCCcccceeeecccc
Q 045402 345 -PIAIKFNCSAKYPCEGIRLYKVNLSYLKLVAQSSCNNVIG 384 (396)
Q Consensus 345 -~~~~~i~~~~~~~i~~i~~~ni~i~~~~~~~~~~c~~v~~ 384 (396)
..++.+.|. ..||+||+|+||+++. +.+...|.|+++
T Consensus 308 ~~~~v~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 345 (349)
T 1hg8_A 308 SAQDWFILCG-DGSCSGFTFSGNAITG--GGKTSSCNYPTN 345 (349)
T ss_dssp TSEEEEEECC-SSCEEEEEEESCEEEC--CSSCCEECSSSS
T ss_pred CCEEEEEEeC-CCcCcCEEEEeEEEEc--CCCCeeeeCCCC
Confidence 578999998 6899999999999984 345678999987
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=1.2e-54 Score=417.60 Aligned_cols=315 Identities=24% Similarity=0.414 Sum_probs=273.1
Q ss_pred cHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccc-cccCcccCccEEEEEcCEEEeeccccccCCCcceEEEeceeceEEe
Q 045402 46 STEAFAKAWAAACASNESTIIYVPKGRYLLGSV-AFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSGVSII 124 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i-~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 124 (396)
-++|||+|+++ |+..++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+.+ +||+|+
T Consensus 11 g~~aiq~ai~~-c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~li~~~~-~nv~I~ 77 (339)
T 1ia5_A 11 GASSASKSKTS-CSTIVLSNVAVPSGTTLD--LTKLN----D-GTHVIFSGETTF--GYKEWS--GPLISVSG-SDLTIT 77 (339)
T ss_dssp HHHHHHHHGGG-CSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEEE
T ss_pred chHHHHHHHHH-hhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--cccccc--CcEEEEEc-CcEEEE
Confidence 36799999964 787778899999999974 3 444 6 899999998876 356676 56888865 999999
Q ss_pred c---eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCC-C---C
Q 045402 125 G---GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAG-D---S 197 (396)
Q Consensus 125 G---G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~-~---~ 197 (396)
| |+|||+|+.||+.... .....||+++.+.+|+|++|+|++++++|.|++++..|++|+|++++|.++. + +
T Consensus 78 G~~gG~IdG~G~~~w~~~~~--~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~ 155 (339)
T 1ia5_A 78 GASGHSINGDGSRWWDGEGG--NGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGG 155 (339)
T ss_dssp ECTTCEEECCGGGTCSSCTT--TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTC
T ss_pred cCCCeEEeCCCCcccccccc--CCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccC
Confidence 9 5999999999986432 2245689999999999999999999999999999999999999999999864 3 6
Q ss_pred CCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCeE
Q 045402 198 PNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQNG 277 (396)
Q Consensus 198 ~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~g 277 (396)
+|+|||++.+|+||+|+||++.++||||++++ .+||+|+||+|..+||++|||++.+ ..+.++||+|+||+|.++.+|
T Consensus 156 ~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~g 233 (339)
T 1ia5_A 156 HNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNG 233 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcE
Confidence 89999999999999999999999999999999 6999999999999999999998766 357899999999999999999
Q ss_pred EEEEeecCCCCceEEeEEEEeEEEecCCc-cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC-CceEEEecCCC
Q 045402 278 LRIKSWARPSNGFVKGVRFIDAVMQNVQN-PIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST-PIAIKFNCSAK 355 (396)
Q Consensus 278 i~i~~~~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~-~~~~~i~~~~~ 355 (396)
++||+|.+ +.|.++||+|+||+|+++.. |+.|++.|... +..+...+.|+||+|+||+++... ..++.+.|+ .
T Consensus 234 irIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~---~~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c~-~ 308 (339)
T 1ia5_A 234 VRIKTNID-TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDT---SSTPTTGVPITDFVLDNVHGSVVSSGTNILISCG-S 308 (339)
T ss_dssp EEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEETCT---TSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-T
T ss_pred EEEEEeCC-CCcEEEeeEEEEEEEECcccccEEEEccCCCC---CCCCcCCceEEEEEEEeEEEEeCCCCEEEEEEeC-C
Confidence 99999977 67999999999999999885 99999988431 122233578999999999999875 578999995 8
Q ss_pred CceecEEEEeEEEEeCCcccceeeecccc
Q 045402 356 YPCEGIRLYKVNLSYLKLVAQSSCNNVIG 384 (396)
Q Consensus 356 ~~i~~i~~~ni~i~~~~~~~~~~c~~v~~ 384 (396)
.||+||+|+||+++. +.+...|.|++.
T Consensus 309 ~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 335 (339)
T 1ia5_A 309 GSCSDWTWTDVSVSG--GKTSSKCTNVPS 335 (339)
T ss_dssp TCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CCEecEEEEeEEEEC--CCCCeeeECCCC
Confidence 899999999999984 345678999985
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=3.2e-54 Score=413.12 Aligned_cols=308 Identities=21% Similarity=0.340 Sum_probs=264.3
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEcCcEEEeccccccCcccCccEEEEEcCEEEeeccccccCCCcceEEEeceeceEEec-
Q 045402 47 TEAFAKAWAAACASNESTIIYVPKGRYLLGSVAFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSGVSIIG- 125 (396)
Q Consensus 47 t~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv~I~G- 125 (396)
++|||+ ++ +|+..++++|+||+|+|+ .|.|+ + +++|+++|++.+ ++..|. ++|+.+. .+||+|+|
T Consensus 8 ~~aiq~-i~-aC~~~gg~~v~vP~G~~l--~l~l~----~-~~~l~~~g~~~~--~~~~w~--~~~i~~~-~~ni~I~G~ 73 (335)
T 1k5c_A 8 VDDAKD-IA-GCSAVTLNGFTVPAGNTL--VLNPD----K-GATVTMAGDITF--AKTTLD--GPLFTID-GTGINFVGA 73 (335)
T ss_dssp TTGGGG-CT-TCSEEEECCEEECTTCCE--EECCC----T-TCEEEECSCEEE--CCCCSC--SCSEEEE-EEEEEEECT
T ss_pred HHHhHH-HH-hcccCCCCEEEECCCEEE--EEEeC----C-CeEEEEeccEec--cccccc--CcEEEEE-ccCEEEEeC
Confidence 678999 75 688888899999999998 34555 6 899999998876 456676 5689887 59999999
Q ss_pred -eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEeceec-EEEEeEEEEcCCC-----CC
Q 045402 126 -GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINRCQD-VLVEGAKIIAAGD-----SP 198 (396)
Q Consensus 126 -G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~n-v~I~~~~i~~~~~-----~~ 198 (396)
|+|||+|+.||+.... .....||+++.|.+|+ ++|+|++++++|.|++++..|+| |+|++++|.++.+ .+
T Consensus 74 ~G~idG~G~~ww~~~~~--~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~ 150 (335)
T 1k5c_A 74 DHIFDGNGALYWDGKGT--NNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGH 150 (335)
T ss_dssp TCEEECCGGGTCCSCTT--TSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCC
T ss_pred ccEEcCChhHhhhcccc--cCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCC
Confidence 8999999999986432 2245689999999999 99999999999999999999999 9999999999743 78
Q ss_pred CCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCeEE
Q 045402 199 NTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGL 278 (396)
Q Consensus 199 ~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi 278 (396)
|+|||++ +|+||+|+||++.++||||++++ .+||+|+||+|..+||++|||++. .+.++||+|+||+|.++.+|+
T Consensus 151 NtDGidi-~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gi 225 (335)
T 1k5c_A 151 NTDGFDV-SANNVTIQNCIVKNQDDCIAIND-GNNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGV 225 (335)
T ss_dssp SCCSEEE-ECSSEEEESCEEESSSCSEEEEE-EEEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEE
T ss_pred CCCeEcc-cCCeEEEEeeEEEcCCCEEEeeC-CeeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceE
Confidence 9999999 99999999999999999999999 599999999999999999999853 468999999999999999999
Q ss_pred EEEeecCCCC-ceEEeEEEEeEEEecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEE--EecCC-CceEEEecC
Q 045402 279 RIKSWARPSN-GFVKGVRFIDAVMQNVQ-NPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIR--GTSST-PIAIKFNCS 353 (396)
Q Consensus 279 ~i~~~~~~~~-g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~--~~~~~-~~~~~i~~~ 353 (396)
+||+|.+ ++ |.|+||+|+||+++++. +|+.|++.|... +..+....+|+||+|+||+ ++... ..++.+.|.
T Consensus 226 rIKt~~g-~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~---~~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 226 RIKAQRT-ATSASVSGVTYDANTISGIAKYGVLISQSYPDD---VGNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp EEEEETT-CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSS---SSSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred EEEEeCC-CCcceEeeeEEEEEEEEccccccEEEEeeCCCC---CCCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 9999987 56 99999999999999997 799999988421 1122235789999999999 77654 668999997
Q ss_pred CCCceecEEEEeEEEEeCCcccceeeeccc
Q 045402 354 AKYPCEGIRLYKVNLSYLKLVAQSSCNNVI 383 (396)
Q Consensus 354 ~~~~i~~i~~~ni~i~~~~~~~~~~c~~v~ 383 (396)
+ ||+||+|+||+++..+ .....|+++.
T Consensus 302 ~--~c~ni~~~nv~i~~~~-~~~~~~~~~~ 328 (335)
T 1k5c_A 302 N--CSGNWNWSQLTVTGGK-AGTIKSDKAK 328 (335)
T ss_dssp S--EESEEEEEEEEEESSB-CCCEECTTCE
T ss_pred C--cCCCEEEEeEEEEcCC-CCceEeEEeE
Confidence 5 9999999999998654 2335555544
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=5.9e-47 Score=377.39 Aligned_cols=293 Identities=14% Similarity=0.126 Sum_probs=244.5
Q ss_pred CCeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCc-EEEe------------ccccccCcccCccEEEEE
Q 045402 27 TSSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKG-RYLL------------GSVAFKGECQSSDITFQI 93 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G-~Y~~------------~~i~l~~~~~s~~v~l~~ 93 (396)
..+.++|+||||++| ||+|||+|++ +|++.+|++|+||+| +|++ +++.|+ | +++|++
T Consensus 48 ~~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk----S-nVtL~L 117 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD----SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR----S-NVNLNI 117 (600)
T ss_dssp BCTTSCBCCCCTTCC----CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC----T-TEEEEE
T ss_pred CCcEEeeecCCCCcc----CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEEc----C-ceEEee
Confidence 356899999999998 9999999997 478788999999999 9999 788887 7 999999
Q ss_pred cCEEEeeccccccCCC-------cceEEEeceeceEEec-eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEec
Q 045402 94 DGTLVAPADYRVLGQA-------DNWLSFEGVSGVSIIG-GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKG 165 (396)
Q Consensus 94 ~G~l~~~~~~~~~~~~-------~~~i~~~~~~nv~I~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~ 165 (396)
+|+|+++.++.+|+.. .++|.+.+.+||+|+| |+|||+|..||+... ....+|+ +.+.+|+ |+|
T Consensus 118 dGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~----~~~~RP~-l~f~~c~---I~G 189 (600)
T 2x6w_A 118 EGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ----LRNGVAF-GRSYNCS---VTG 189 (600)
T ss_dssp CSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC----CEEEEEC-CSEEEEE---EES
T ss_pred ecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc----cCCCCCE-EEEeeeE---EeC
Confidence 9999999999888641 2347788899999999 999999999996221 1113577 7888888 999
Q ss_pred eEEecC-CcceEEE---eceecEEEEeEE----EEcCCCCCCCCceeeecceeEEEEccEEecCCceEEe-cCCCe-eEE
Q 045402 166 LLSLNS-QMYHIVI---NRCQDVLVEGAK----IIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISI-GRGTN-NLW 235 (396)
Q Consensus 166 v~i~~~-~~~~i~~---~~~~nv~I~~~~----i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~-~~~s~-ni~ 235 (396)
++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |+++. ++.
T Consensus 190 ITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~ 259 (600)
T 2x6w_A 190 ITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIA 259 (600)
T ss_dssp CEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHE
T ss_pred eEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeE
Confidence 999999 9999999 999999999999 776 6899999 99999999999999999 99764 467
Q ss_pred EEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCCccEEEEeec
Q 045402 236 IERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQNPIIIDQNY 314 (396)
Q Consensus 236 i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~ 314 (396)
++ .|..+| |++|||+ ..+.++||+|+| +||++.+ ++|.|+||+|+||+|+++..++.+.+..
T Consensus 260 ~e--~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G-~GG~V~NItfeNI~m~nV~~~I~i~q~~ 322 (600)
T 2x6w_A 260 CS--VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAG-AGSYAYNMQVENNIAVIYGQFVILGSDV 322 (600)
T ss_dssp EE--EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTT-TCSEEEEEEEESCEEEESSEEEEEEECB
T ss_pred EE--EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecC-CCceEEEEEEEEEEEEccceEEEeCCCC
Confidence 77 566776 8999996 346789999999 4555545 6799999999999999999888887641
Q ss_pred CCCCCCCCCCCcceEEEeEEEEeEEEecCCC------ceEEEecCC-------CCceecEEEEeEEEEeCC
Q 045402 315 CPHNLNCPGQVSGVKISDIIYWNIRGTSSTP------IAIKFNCSA-------KYPCEGIRLYKVNLSYLK 372 (396)
Q Consensus 315 ~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~~------~~~~i~~~~-------~~~i~~i~~~ni~i~~~~ 372 (396)
...+.+.|+||+|+||+++.... .+..+.+.| ..+|++|+|+|+++..++
T Consensus 323 --------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 --------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp --------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred --------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 12345699999999999997542 236676655 368999999999997755
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=1.3e-40 Score=336.76 Aligned_cols=304 Identities=11% Similarity=0.063 Sum_probs=236.4
Q ss_pred eEEeeccccCCCCcccHHHHHHHHHHHhhc-------------------------CCCcEEEEcCcEEEe---ccccccC
Q 045402 31 YNVLRFGAKGNGVIDSTEAFAKAWAAACAS-------------------------NESTIIYVPKGRYLL---GSVAFKG 82 (396)
Q Consensus 31 ~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~-------------------------~~g~~v~~p~G~Y~~---~~i~l~~ 82 (396)
++...|||++||.+|.+.+|. ++.++|.. .++++|+||+|+|++ +++.|+
T Consensus 143 ~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~- 220 (549)
T 1x0c_A 143 FDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLS- 220 (549)
T ss_dssp EGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEEC-
T ss_pred ECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEec-
Confidence 444568999999999998877 55444433 468899999999996 578998
Q ss_pred cccCccEE-EEEc-C-EEEeeccccccCCCcceEEEeceeceEEec-eeEeCCCCccccccccc-CCCCCCCceeEEE--
Q 045402 83 ECQSSDIT-FQID-G-TLVAPADYRVLGQADNWLSFEGVSGVSIIG-GALDAKGTSLWACKAAA-GTTCPNGATTLSI-- 155 (396)
Q Consensus 83 ~~~s~~v~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~nv~I~G-G~idg~g~~~~~~~~~~-~~~~~~~~~~i~~-- 155 (396)
| +++ |+++ | .|++ +++...+++||+|+| |+|||+|..||...... ......+|+++.|
T Consensus 221 ---s-~~~~L~l~~GA~L~g-----------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~ 285 (549)
T 1x0c_A 221 ---S-SVTWVYFAPGAYVKG-----------AVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWR 285 (549)
T ss_dssp ---T-TCCEEEECTTEEEES-----------CEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEE
T ss_pred ---C-CCCeEecCCCCEEEE-----------EEEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEee
Confidence 7 999 9997 5 4543 223333789999999 99999999999532110 0011235777777
Q ss_pred ----EeecceEEeceEEecCCcceEEEe-ce-ec--EEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEe
Q 045402 156 ----TNSNNVSIKGLLSLNSQMYHIVIN-RC-QD--VLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISI 227 (396)
Q Consensus 156 ----~~~~nv~i~~v~i~~~~~~~i~~~-~~-~n--v~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~ 227 (396)
.+|+|++|+|+++++++.|++++. .| ++ |+|+++++.++. .+++|||++. +||+|+||+|.++||||++
T Consensus 286 ~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaI 362 (549)
T 1x0c_A 286 GTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKM 362 (549)
T ss_dssp EECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEEC
T ss_pred ccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEE
Confidence 999999999999999999999966 56 69 999999998753 3589999998 9999999999999999999
Q ss_pred cCCCeeEEEEeeeecC--Cce-EEEEeccccCCCCCEEEEEEEeeEEecCCe------EEEEEee--c--C------CCC
Q 045402 228 GRGTNNLWIERVTCGP--GHG-ISIGSLGKDMDEEGVQNVTVWKTVFTGTQN------GLRIKSW--A--R------PSN 288 (396)
Q Consensus 228 ~~~s~ni~i~n~~~~~--~~g-i~igs~~~~~~~~~i~ni~i~n~~~~~~~~------gi~i~~~--~--~------~~~ 288 (396)
++ +||+|+||+|+. +++ +++||. .+.++||+|+||+|.++.. +..|++. + + ...
T Consensus 363 ks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~ 435 (549)
T 1x0c_A 363 YY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHS 435 (549)
T ss_dssp CS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCC
T ss_pred CC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCC
Confidence 98 999999999975 456 999883 4789999999999998753 4447761 1 1 126
Q ss_pred ceEEeEEEEeEEEecCC-ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC-----CceEEEecCCC------C
Q 045402 289 GFVKGVRFIDAVMQNVQ-NPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST-----PIAIKFNCSAK------Y 356 (396)
Q Consensus 289 g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~-----~~~~~i~~~~~------~ 356 (396)
|.|+||+|+||+|+++. +++.+...+. .++.+++||+|+||+++... ..+..+.+.+. .
T Consensus 436 G~i~nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~ 506 (549)
T 1x0c_A 436 TGNSNMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQI 506 (549)
T ss_dssp CBEEEEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBC
T ss_pred ceEccEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccce
Confidence 78999999999999987 6665544321 13457999999999987654 33455665433 6
Q ss_pred ceecEEEEeEEEEe
Q 045402 357 PCEGIRLYKVNLSY 370 (396)
Q Consensus 357 ~i~~i~~~ni~i~~ 370 (396)
+|+||+|+||++..
T Consensus 507 ~v~nI~f~NV~i~G 520 (549)
T 1x0c_A 507 TVTDFSIEGFTVGN 520 (549)
T ss_dssp CEEEEEEEEEEETT
T ss_pred eeeeEEEEeEEEeC
Confidence 89999999999863
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=6.6e-39 Score=321.17 Aligned_cols=270 Identities=19% Similarity=0.198 Sum_probs=208.2
Q ss_pred CCeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEe-ccccccCcccCccEEEEEcC----EEEeec
Q 045402 27 TSSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLL-GSVAFKGECQSSDITFQIDG----TLVAPA 101 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~-~~i~l~~~~~s~~v~l~~~G----~l~~~~ 101 (396)
+++.++|+||||++||++|||+|||+||++ |++|+||+|+|++ ++|.|+ + +++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~------Gg~V~iP~GtYlis~~l~l~----s-nv~L~g~g~~~t~L~~~~ 87 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRFMD 87 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT------SSCEEECSEEEEESSCEEEC----S-SEEEEESCTTTEEEEECT
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc------CCEEEECCccEEEeCceEEC----C-CcEEEEeeCCCCEEEeCC
Confidence 456899999999999999999999999973 3899999999999 889998 7 99999986 677765
Q ss_pred cccccCCC-cceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEec
Q 045402 102 DYRVLGQA-DNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINR 180 (396)
Q Consensus 102 ~~~~~~~~-~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~ 180 (396)
+...|... .+++.+.+.+||+|+|++|||+|+.||.... .....+|.+|.|.+|+|++|+++++++++.+++.+..
T Consensus 88 ~~p~~~~li~~lI~a~~~~NItItG~TIDGNG~~~g~~~~---~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~ 164 (609)
T 3gq8_A 88 SVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS---GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITC 164 (609)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC---CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEEC
T ss_pred CCCCCCceeeeeeeecccccEEEEeeEEECCccccCcccc---cCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeC
Confidence 54433211 1234567899999999999999984443211 1234689999999999999999999999987665443
Q ss_pred eecEEEEeEEEEcCCCCCCCCceeeec------ceeEEEEccEEec-CCceEEecCCCeeEEEEeeeecC------CceE
Q 045402 181 CQDVLVEGAKIIAAGDSPNTDGIHIQQ------SRNVKIRSSSIKT-GDDCISIGRGTNNLWIERVTCGP------GHGI 247 (396)
Q Consensus 181 ~~nv~I~~~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i~~-~dD~i~~~~~s~ni~i~n~~~~~------~~gi 247 (396)
+.+ + ||+++++ |+||+|+||++++ +||||++++ ++||+|+||+|++ ++|+
T Consensus 165 ~~~---------------N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~GI 227 (609)
T 3gq8_A 165 GGL---------------D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGF 227 (609)
T ss_dssp SSS---------------S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCSE
T ss_pred CCC---------------C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcccE
Confidence 322 2 5555555 9999999999955 999999988 9999999999953 3689
Q ss_pred EEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeE-EEecCC-ccEEEEeecCCCCCCCCCCC
Q 045402 248 SIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDA-VMQNVQ-NPIIIDQNYCPHNLNCPGQV 325 (396)
Q Consensus 248 ~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni-~~~~~~-~~i~i~~~~~~~~~~~~~~~ 325 (396)
+||+ ..+||+|+||++.++.+|++||++. ..+.++||.|+|. .++++. +.+....++... .+
T Consensus 228 sIGs--------gs~NVtV~Nc~i~nt~~GIrIKt~~--~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~------dp 291 (609)
T 3gq8_A 228 EIDD--------GSRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAAT------AP 291 (609)
T ss_dssp EECT--------TCEEEEEESEEEESSSEEEEEEECT--TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTT------SC
T ss_pred EccC--------CcccEEEEeeEEECCCCEEEEEecC--CCCccccEEEECCEeecCceEecceEEccccCC------CC
Confidence 9964 2399999999999999999999874 4678999999994 555544 455544433221 11
Q ss_pred cceEEEeEEEEeEEEecC
Q 045402 326 SGVKISDIIYWNIRGTSS 343 (396)
Q Consensus 326 ~~~~i~ni~~~ni~~~~~ 343 (396)
.....+||+++|+....+
T Consensus 292 ~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 292 QSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp CCSSCEEEEEEEEEEESC
T ss_pred CcceecceEeecceEEee
Confidence 223568888888887654
No 14
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=1.1e-38 Score=323.98 Aligned_cols=270 Identities=19% Similarity=0.213 Sum_probs=206.4
Q ss_pred CCeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEe-ccccccCcccCccEEEEEcC----EEEeec
Q 045402 27 TSSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLL-GSVAFKGECQSSDITFQIDG----TLVAPA 101 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~-~~i~l~~~~~s~~v~l~~~G----~l~~~~ 101 (396)
+++.++|+||||++||++|||+|||+||++ |++|+||+|+|++ ++|.|+ + +++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------Gg~V~IPaGtYlisg~I~L~----s-nv~L~Geg~~~t~Lk~~~ 87 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRFMD 87 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT------TSCEEECSEEEEESSCEEEC----S-SCEEEEEEEEEEEEEECT
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc------CCEEEECCccEEEEeEEEEC----C-CcEEEEecCCCCEEEeCC
Confidence 456899999999999999999999999973 3899999999999 889998 6 89999986 567665
Q ss_pred cccccCCC-cceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEec
Q 045402 102 DYRVLGQA-DNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINR 180 (396)
Q Consensus 102 ~~~~~~~~-~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~ 180 (396)
+...|... .+|+.+.+++||+|+|++|||+|+.+|.... .....+|.+|.|.+|+|++|+++++++++.+++.+.
T Consensus 88 d~p~~~~li~~lI~a~gveNItItG~TIDGNG~~~g~~~~---~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~- 163 (772)
T 3gqn_A 88 SVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS---GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDIT- 163 (772)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC---CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEE-
T ss_pred CCCCCCceeeeeeeccCceeEEEEeeEEeCCccccCcccc---cCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEe-
Confidence 54433211 1334567899999999999999984443211 123468999999999999999999999998655443
Q ss_pred eecEEEEeEEEEcCCCCCCCCceeeec------ceeEEEEccEEec-CCceEEecCCCeeEEEEeeeecC------CceE
Q 045402 181 CQDVLVEGAKIIAAGDSPNTDGIHIQQ------SRNVKIRSSSIKT-GDDCISIGRGTNNLWIERVTCGP------GHGI 247 (396)
Q Consensus 181 ~~nv~I~~~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i~~-~dD~i~~~~~s~ni~i~n~~~~~------~~gi 247 (396)
++.+ + ||+++++ |+||+|+||.+++ +||||++++ ++||+|+||+|.+ ++|+
T Consensus 164 ------------np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~GI 227 (772)
T 3gqn_A 164 ------------CGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGF 227 (772)
T ss_dssp ------------CSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCSE
T ss_pred ------------CCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcccE
Confidence 3322 2 5555555 9999999999965 999999988 9999999999953 3689
Q ss_pred EEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEe-EEEecCC-ccEEEEeecCCCCCCCCCCC
Q 045402 248 SIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFID-AVMQNVQ-NPIIIDQNYCPHNLNCPGQV 325 (396)
Q Consensus 248 ~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~n-i~~~~~~-~~i~i~~~~~~~~~~~~~~~ 325 (396)
+||+ ..+||+|+||++.++.+|++||++. +++.++||.|.| +.++++. +.+....++.. ..+
T Consensus 228 sIGs--------gs~NVtV~Nc~~~nT~nGIRIKt~~--~gg~v~NV~I~gnis~~dvrsynir~iG~h~a------~dp 291 (772)
T 3gqn_A 228 EIDD--------GSRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAP 291 (772)
T ss_dssp EECT--------TCEEEEEEEEEEESSSEEEEECCCT--TSCCCEEEEEEEEEEESCSEEEEECCTTSCSS------SSC
T ss_pred EecC--------CcccEEEEceEEECCCcEEEEEEeC--CCCccccEEEECCEEeccCeEecceEEccccC------CCC
Confidence 9974 2399999999999999999999774 567899999985 7776654 33433222221 111
Q ss_pred cceEEEeEEEEeEEEecC
Q 045402 326 SGVKISDIIYWNIRGTSS 343 (396)
Q Consensus 326 ~~~~i~ni~~~ni~~~~~ 343 (396)
...+..||.++|+....+
T Consensus 292 ~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 292 QSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp CCSSCEEEEEEEEEEESC
T ss_pred CCccCccEEeecceEEcc
Confidence 223568888888876654
No 15
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=4.5e-38 Score=317.89 Aligned_cols=267 Identities=14% Similarity=0.119 Sum_probs=213.7
Q ss_pred CCCcEEEEcCcEEEe-------------ccccccCcccCccEE-EEEc-C-EEEeeccccccCCCcceEEEeceeceEEe
Q 045402 61 NESTIIYVPKGRYLL-------------GSVAFKGECQSSDIT-FQID-G-TLVAPADYRVLGQADNWLSFEGVSGVSII 124 (396)
Q Consensus 61 ~~g~~v~~p~G~Y~~-------------~~i~l~~~~~s~~v~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~nv~I~ 124 (396)
.++++||||+|+|++ +++.|+ | +++ |+++ | +|++ ++.+.+++||+|+
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lk----S-nvt~L~L~~GA~l~g------------~i~~~~~~nv~It 291 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLN----S-NTYWVYLAPGAYVKG------------AIEYFTKQNFYAT 291 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECC----T-TCCEEEECTTEEEES------------CEEECCSSCEEEE
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEec----C-CCceEEecCCcEEEc------------cEEEeCceeEEEE
Confidence 478899999999999 457887 7 998 9997 6 4443 4678889999999
Q ss_pred c-eeEeCCCCcccccccccCCCCCCCceeEEEE------eecceEEeceEEecCCcceEEEeceecE--EEEeEEEEcCC
Q 045402 125 G-GALDAKGTSLWACKAAAGTTCPNGATTLSIT------NSNNVSIKGLLSLNSQMYHIVINRCQDV--LVEGAKIIAAG 195 (396)
Q Consensus 125 G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~------~~~nv~i~~v~i~~~~~~~i~~~~~~nv--~I~~~~i~~~~ 195 (396)
| |+|||+|..||......-.....+|.++.+. +|+|++|+|++++|+++|++++..|++| +|+++++.++.
T Consensus 292 G~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 292 GHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp SSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred eCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 9 9999999999964221111223467788877 9999999999999999999999999999 99999998743
Q ss_pred CCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCC--ce-EEEEeccccCCCCCEEEEEEEeeEEe
Q 045402 196 DSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPG--HG-ISIGSLGKDMDEEGVQNVTVWKTVFT 272 (396)
Q Consensus 196 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~--~g-i~igs~~~~~~~~~i~ni~i~n~~~~ 272 (396)
..++|||++. +||+|+||+|.++||||++++ +||+|+||+|+.+ ++ +++||. .+.++||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEE
Confidence 2369999998 999999999999999999998 9999999998764 56 999883 578999999999998
Q ss_pred cCCe--------EEEEEeec--------CCCCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEE
Q 045402 273 GTQN--------GLRIKSWA--------RPSNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYW 336 (396)
Q Consensus 273 ~~~~--------gi~i~~~~--------~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ 336 (396)
++.. +..+.+.. ..+.+ | ||+|+||+++++..++ +.. . +...|+||+|+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i--~----------p~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI--T----------PLQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE--C----------CSEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE--C----------CCCCEEEEEEE
Confidence 8643 33332210 00234 8 9999999999998875 332 1 13479999999
Q ss_pred eEEEec------CCCceEEEecCCCCceecEEEEeEEEEe
Q 045402 337 NIRGTS------STPIAIKFNCSAKYPCEGIRLYKVNLSY 370 (396)
Q Consensus 337 ni~~~~------~~~~~~~i~~~~~~~i~~i~~~ni~i~~ 370 (396)
||++++ ....+..+.+.+ .+|++|+|+||++..
T Consensus 507 NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g 545 (574)
T 1ogo_X 507 NVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGG 545 (574)
T ss_dssp EEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETT
T ss_pred eEEEeCccccccccccceeEecCC-CccceEEEEeEEEeC
Confidence 999876 323355666766 899999999999953
No 16
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=2.5e-37 Score=305.88 Aligned_cols=299 Identities=14% Similarity=0.163 Sum_probs=223.6
Q ss_pred CCCCCeeeE-EeeccccCCCCcccHHHHHHHHHHHhhcC-CCcEEEEcCcEEEeccccccCcccCccEEEEEc--CEEEe
Q 045402 24 SAATSSVYN-VLRFGAKGNGVIDSTEAFAKAWAAACASN-ESTIIYVPKGRYLLGSVAFKGECQSSDITFQID--GTLVA 99 (396)
Q Consensus 24 ~~~~~~~~~-v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~-~g~~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~--G~l~~ 99 (396)
...++..++ |++|||++||++|||+|||+||++ |++. ++++|+||+|+|++++|.|+ | +++|+++ ++|++
T Consensus 15 p~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aida-c~~~~ggg~V~vP~GtYl~g~I~lk----s-~v~L~l~~GatL~~ 88 (464)
T 1h80_A 15 PTQQDVNYDLVDDFGANGNDTSDDSNALQRAINA-ISRKPNGGTLLIPNGTYHFLGIQMK----S-NVHIRVESDVIIKP 88 (464)
T ss_dssp CSCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHH-HHTSTTCEEEEECSSEEEECSEECC----T-TEEEEECTTCEEEE
T ss_pred CCCCcceeeehhccCcCCCCCchhHHHHHHHHHH-HhhccCCcEEEECCCeEEEeeEecc----C-ceEEEEcCCcEEEe
Confidence 444567888 999999999999999999999975 5665 78999999999999999998 7 9999998 48888
Q ss_pred ecc--ccccCCCcceEEE---eceeceEEec-e---eEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEec
Q 045402 100 PAD--YRVLGQADNWLSF---EGVSGVSIIG-G---ALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLN 170 (396)
Q Consensus 100 ~~~--~~~~~~~~~~i~~---~~~~nv~I~G-G---~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~ 170 (396)
+.+ ...|+ ++.+ .+.+|++|+| | +|||+|.. ..+|.++.|.+|+|++|+|+++++
T Consensus 89 s~~td~~~y~----~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~------------~~rp~~i~~~~~~Nv~I~gIti~n 152 (464)
T 1h80_A 89 TWNGDGKNHR----LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR------------DKNLAVFKLGDVRNYKISNFTIDD 152 (464)
T ss_dssp CCCTTCSCEE----EEEESSSSCEEEEEEEECTTCEEEECTTCS------------CCBEEEEEECSEEEEEEEEEEEEC
T ss_pred ccCCCcccCC----ceEeecccCccceEEECcCcceEEeCCCCC------------CCCceEEEEEeeccEEEeeeEEec
Confidence 763 44432 3433 6789999999 8 88988752 236889999999999999999999
Q ss_pred CCcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEE--ecCCCeeEEEEeeeecCCceEE
Q 045402 171 SQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCIS--IGRGTNNLWIERVTCGPGHGIS 248 (396)
Q Consensus 171 ~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~--~~~~s~ni~i~n~~~~~~~gi~ 248 (396)
.|.++ .|.+|.+ . ++||+++ .|+||+|+||++.++||++. ...+++||+|+||+|.+++|++
T Consensus 153 --~w~ih--~s~~V~i-----~------NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIr 216 (464)
T 1h80_A 153 --NKTIF--ASILVDV-----T------ERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALR 216 (464)
T ss_dssp --CSCBS--CSEEECE-----E------EETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEE
T ss_pred --cceEe--eceeeee-----e------cCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEE
Confidence 45432 3333322 2 5799998 78999999999999998774 2334899999999999977888
Q ss_pred EEecc----ccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCC
Q 045402 249 IGSLG----KDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQ 324 (396)
Q Consensus 249 igs~~----~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~ 324 (396)
|.+.+ .. ..+.++||+|+||+|.+...++.|+++ .+.++||+|+||+++++.+++.|.+.|++.+..
T Consensus 217 Iktg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~----~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd~---- 287 (464)
T 1h80_A 217 METDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPH----FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFSP---- 287 (464)
T ss_dssp EECCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECT----TCBCCCEEEEEEEEESSSCSEEECCCCCEECC-----
T ss_pred EEeCCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCC----CceEeEEEEEEEEEEccceeEEEecCcccccCc----
Confidence 86530 22 246799999999999999999999843 357899999999999999999999988864331
Q ss_pred CcceEEEeEEEEeEE------Eec---------CCCceEEEecC-------------CCCceecEEEEeEEEEe
Q 045402 325 VSGVKISDIIYWNIR------GTS---------STPIAIKFNCS-------------AKYPCEGIRLYKVNLSY 370 (396)
Q Consensus 325 ~~~~~i~ni~~~ni~------~~~---------~~~~~~~i~~~-------------~~~~i~~i~~~ni~i~~ 370 (396)
.+....+.+|+|.. +.. ....|+.+.|. +....+++.++||++.+
T Consensus 288 -~~~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 288 -TDEVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp ---------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred -cccccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEecc
Confidence 11245666676554 111 01235556554 55567899999999977
No 17
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=3.6e-29 Score=244.94 Aligned_cols=303 Identities=14% Similarity=0.150 Sum_probs=183.5
Q ss_pred eeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEec--------cccccCcccCccEEEEEcC----EE
Q 045402 30 VYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLLG--------SVAFKGECQSSDITFQIDG----TL 97 (396)
Q Consensus 30 ~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~--------~i~l~~~~~s~~v~l~~~G----~l 97 (396)
.++|+||||++||++|||+|||+||++||+ .+|++|+||+|+|++. ++.++ | +++|+++| +|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~-~gg~~v~~p~G~y~~~~~~~~~~g~l~~~----~-~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA-AGGGTVYLPAGEYRVSAAGEPGDGCLMLK----D-GVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH-TTSEEEEECSEEEEECCCSSGGGCSEECC----T-TEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh-cCCCEEEECCeEEEEcccccCCcccEEec----C-CeEEEEcCCCCcEE
Confidence 589999999999999999999999998754 5789999999999984 67877 7 99999986 44
Q ss_pred EeeccccccCCC------cceEEEeceeceEEec------eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEec
Q 045402 98 VAPADYRVLGQA------DNWLSFEGVSGVSIIG------GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKG 165 (396)
Q Consensus 98 ~~~~~~~~~~~~------~~~i~~~~~~nv~I~G------G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~ 165 (396)
++..+...+... +.-....+.+|++|.| |+++| ||.....+ .+..|++++|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~-----------~~~~~~nv~I~~ 140 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG-----------GDGADRDVTIER 140 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSCTT-----------SSCCEEEEEEEE
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccCcc-----------ccccccceEEEe
Confidence 555443322100 1111234578888888 45665 77643211 124699999999
Q ss_pred eEEecCCcceEEEecee-cEEEEeEEEEcCCCCCCCCceeeecceeEEEEccE-EecCCceEEecCCCeeEEEEeeeecC
Q 045402 166 LLSLNSQMYHIVINRCQ-DVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSS-IKTGDDCISIGRGTNNLWIERVTCGP 243 (396)
Q Consensus 166 v~i~~~~~~~i~~~~~~-nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~-i~~~dD~i~~~~~s~ni~i~n~~~~~ 243 (396)
+++.+++.|++++..|. +++++|+.+... ..|||.++.|++++|++|. +...+|||.+..++++++|+||++..
T Consensus 141 ~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~----~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~ 216 (377)
T 2pyg_A 141 VEVREMSGYGFDPHEQTINLTIRDSVAHDN----GLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG 216 (377)
T ss_dssp EEEECCSSCSEEECSSEEEEEEESCEEESC----SSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES
T ss_pred EEEEecccceEEeecccCCeEEEeEEeecC----CCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC
Confidence 99999999999998765 788888888652 4566666666666666663 33456666665556666666666654
Q ss_pred C-ceEEEEeccccCCCCC-----------------------EEEEEEEeeEEecC-CeEEEEEeecCCCCceEEeEEEEe
Q 045402 244 G-HGISIGSLGKDMDEEG-----------------------VQNVTVWKTVFTGT-QNGLRIKSWARPSNGFVKGVRFID 298 (396)
Q Consensus 244 ~-~gi~igs~~~~~~~~~-----------------------i~ni~i~n~~~~~~-~~gi~i~~~~~~~~g~v~nI~~~n 298 (396)
. .|+.+...+.+ .... +++++|+|+++.++ ..|++++. +++++|+|
T Consensus 217 ~~~g~~~~~~g~~-~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g--------~~~~~i~~ 287 (377)
T 2pyg_A 217 NGSSGLVVQRGLE-DLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNGSSGVRVYG--------AQDVQILD 287 (377)
T ss_dssp CSSCSEEEECCSS-CCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEE--------EEEEEEES
T ss_pred ccCceEEEecccc-CCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCCCceEEEec--------CCCcEEEC
Confidence 3 23222111110 0122 34555555555554 44555541 45566666
Q ss_pred EEEecCCc----cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCCCceEEEecCCCCceecEEEEeEEEEe
Q 045402 299 AVMQNVQN----PIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNCSAKYPCEGIRLYKVNLSY 370 (396)
Q Consensus 299 i~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~~~~~~i~~i~~~ni~i~~ 370 (396)
.++.+... +..+.+.|......+ .....-+++++++..++.....+.-+.... ..+++++|++..+..
T Consensus 288 N~i~~n~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~-~~~~~~~i~~n~i~~ 359 (377)
T 2pyg_A 288 NQIHDNAQAAAVPEVLLQSFDDTAGAS---GTYYTTLNTRIEGNTISGSANSTYGIQERN-DGTDYSSLIDNDIAG 359 (377)
T ss_dssp CEEESCCSSSSCCSEEEECEEETTSSS---CEEECCBCCEEESCEEECCSSCCEEEEECS-SSCBCCEEESCEEES
T ss_pred cEEECCcccccccceEEEEecCCCccc---eeeeeccCeEEECCEEECcCCCccceEEcc-CCCccEEEECcEEeC
Confidence 66655432 111111121100000 000112566777777766655433333222 345667777766654
No 18
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.96 E-value=7.5e-30 Score=241.94 Aligned_cols=207 Identities=17% Similarity=0.209 Sum_probs=160.1
Q ss_pred CeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCc----EEEec-cccccCcccCccEEEEEcC--EEEee
Q 045402 28 SSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKG----RYLLG-SVAFKGECQSSDITFQIDG--TLVAP 100 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G----~Y~~~-~i~l~~~~~s~~v~l~~~G--~l~~~ 100 (396)
+..++|+||||+|||++|||+|||+||+++|+..+|++||||+| +|+++ ++.|+ | +++|.+++ +|.++
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~Lk----S-nV~L~Ge~~AtIl~s 123 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLIP----G-GVNIRGVGKASQLRA 123 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEEC----T-TEEEECCSTTSEEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEec----C-CeEEEEecCceEeec
Confidence 45899999999999999999999999999877668899999999 99885 58887 7 99999985 55432
Q ss_pred ccc-------cccCCCcceEEEeceeceEEec-eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEE--ec
Q 045402 101 ADY-------RVLGQADNWLSFEGVSGVSIIG-GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLS--LN 170 (396)
Q Consensus 101 ~~~-------~~~~~~~~~i~~~~~~nv~I~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i--~~ 170 (396)
... ..| .+++.+.+.+|++|+| |+|||++..|+.. . ...|+ .....++++.+++++. ..
T Consensus 124 ~~~I~GtIia~~y---~s~I~~~~VeNIaITG~GTIDG~g~n~t~e-~-----~~~Rq--~~~~~fdnV~Vn~Vt~~v~~ 192 (514)
T 2vbk_A 124 KSGLTGSVLRLSY---DSDTIGRYLRNIRVTGNNTCNGIDTNITAE-D-----SVIRQ--VYGWVFDNVMVNEVETAYLM 192 (514)
T ss_dssp CTTCCSEEEEECC---CSCCSCEEEESCEEECCSSSEEEEESCCTT-C-----SSCCC--EESEEEESCEEEEEEEEEEE
T ss_pred cccccccEEeccC---CccccccCceEEEEECCCeEeCCCCCcccc-c-----eeeec--cceEEeeeEEEEeEEEeEec
Confidence 211 011 2346667789999999 9999977544221 1 01111 2222367999999965 46
Q ss_pred CCcceEEEeceecEEEE-eEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecCC-----------CeeEEEEe
Q 045402 171 SQMYHIVINRCQDVLVE-GAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRG-----------TNNLWIER 238 (396)
Q Consensus 171 ~~~~~i~~~~~~nv~I~-~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~-----------s~ni~i~n 238 (396)
++.|.+++..|++++++ ++++. .+|+||.|.+|+|..|||||+++++ ++++.
T Consensus 193 Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~--- 256 (514)
T 2vbk_A 193 QGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR--- 256 (514)
T ss_dssp ESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---
T ss_pred cCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---
Confidence 78999999999999987 55553 2799999999999999999999984 55665
Q ss_pred eeecCCce-EEEEeccccCCCCCEEE-EEEEeeEEecCC
Q 045402 239 VTCGPGHG-ISIGSLGKDMDEEGVQN-VTVWKTVFTGTQ 275 (396)
Q Consensus 239 ~~~~~~~g-i~igs~~~~~~~~~i~n-i~i~n~~~~~~~ 275 (396)
|| +.+||+.. .++++| |++++|.|.++.
T Consensus 257 ------hgav~igSE~m---~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 ------SEAIILDSETM---CIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ------CEEEEEESSEE---EESCSEEEEESCCEEEEEE
T ss_pred ------cccEEECchhh---cccccccEEEEeeeccCCc
Confidence 65 99998621 467899 999999999874
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.94 E-value=9.1e-25 Score=216.29 Aligned_cols=228 Identities=14% Similarity=0.145 Sum_probs=178.4
Q ss_pred ceEEEeceeceEEecee-EeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecC--CcceEEEeceecEEEE
Q 045402 111 NWLSFEGVSGVSIIGGA-LDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNS--QMYHIVINRCQDVLVE 187 (396)
Q Consensus 111 ~~i~~~~~~nv~I~GG~-idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~--~~~~i~~~~~~nv~I~ 187 (396)
.+|.+.+++|++|+|-+ ++.. .+.+.+.+|+|++|+++++.++ ..++|++..|+||+|+
T Consensus 191 ~~i~~~~~~nv~i~giti~nsp------------------~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~ 252 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINSP------------------MWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIE 252 (448)
T ss_dssp CSEEEESCEEEEEESCEEESCS------------------SCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEE
T ss_pred eEEEEEcccceEEEeeEEEeCC------------------CceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEE
Confidence 47899999999999944 4332 2358899999999999999974 4579999999999999
Q ss_pred eEEEEcCCC------CCCCCceeee-cceeEEEEccEEe--cCCceEEecCC----CeeEEEEeeeecCC-ceEEEEecc
Q 045402 188 GAKIIAAGD------SPNTDGIHIQ-QSRNVKIRSSSIK--TGDDCISIGRG----TNNLWIERVTCGPG-HGISIGSLG 253 (396)
Q Consensus 188 ~~~i~~~~~------~~~~DGi~~~-~s~nv~I~n~~i~--~~dD~i~~~~~----s~ni~i~n~~~~~~-~gi~igs~~ 253 (396)
|++|.+.+| ..+.||+++. .|+||+|+||.++ .+++||++++. .+||+|+||++.++ +|+.|++..
T Consensus 253 n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~ 332 (448)
T 3jur_A 253 KCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNS 332 (448)
T ss_dssp SCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCT
T ss_pred eeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEc
Confidence 999998543 1123344433 2899999999994 45669999874 48999999999876 699999864
Q ss_pred ccCCCCCEEEEEEEeeEEecCCeEE-EEEeecC----CCCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcce
Q 045402 254 KDMDEEGVQNVTVWKTVFTGTQNGL-RIKSWAR----PSNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGV 328 (396)
Q Consensus 254 ~~~~~~~i~ni~i~n~~~~~~~~gi-~i~~~~~----~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 328 (396)
.+ .+.++||+|+|++|.+...++ .|...+. ...+.++||+|+||+.++...++.|... +..
T Consensus 333 g~--gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~~~ 398 (448)
T 3jur_A 333 RR--GGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------END 398 (448)
T ss_dssp TT--CSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------TTB
T ss_pred CC--CceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------CCC
Confidence 32 367999999999999988887 8876543 2356899999999999987778887531 234
Q ss_pred EEEeEEEEeEEEecCCCceEEEec----CCCCceecEEEEeEEEEeC
Q 045402 329 KISDIIYWNIRGTSSTPIAIKFNC----SAKYPCEGIRLYKVNLSYL 371 (396)
Q Consensus 329 ~i~ni~~~ni~~~~~~~~~~~i~~----~~~~~i~~i~~~ni~i~~~ 371 (396)
+++||+|+||+++..+. +..+.. .....+++|+|+||+|..+
T Consensus 399 p~~~I~~~nv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 399 YVKDILISDTIIEGAKI-SVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp CEEEEEEEEEEEESCSE-EEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEeeEEEEEEEEEcccc-ceeEeccccccccceecccEEEEEEEcCE
Confidence 89999999999997653 344432 3345689999999999753
No 20
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.91 E-value=7.7e-22 Score=203.00 Aligned_cols=248 Identities=13% Similarity=0.094 Sum_probs=195.4
Q ss_pred ceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEec--C-CcceEEEeceecEEEE
Q 045402 111 NWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLN--S-QMYHIVINRCQDVLVE 187 (396)
Q Consensus 111 ~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~--~-~~~~i~~~~~~nv~I~ 187 (396)
.+|.+.+++||+|+|-++.... .+.+.+.+|+|++|+++++.. + ..++|++..|+||+|+
T Consensus 332 ~~i~~~~~~nv~I~giti~ns~-----------------~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~ 394 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNPA-----------------FHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVF 394 (608)
T ss_dssp CSEEEESEEEEEEESCEEECCS-----------------SCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEE
T ss_pred eEEEEEeeeeEEEeCcEEecCC-----------------CCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEE
Confidence 4789999999999994443221 235899999999999999865 2 3579999999999999
Q ss_pred eEEEEcCCC------CCCCCceeeecceeEEEEccEEecCCceEEecCC----CeeEEEEeeeecCC-ceEEEEeccccC
Q 045402 188 GAKIIAAGD------SPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRG----TNNLWIERVTCGPG-HGISIGSLGKDM 256 (396)
Q Consensus 188 ~~~i~~~~~------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~----s~ni~i~n~~~~~~-~gi~igs~~~~~ 256 (396)
|++|.+.+| +.+.||++...|+||+|+||.+..++++++++++ .+||+|+||+|.++ +|+.|++....
T Consensus 395 n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~- 473 (608)
T 2uvf_A 395 NNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTI- 473 (608)
T ss_dssp SCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTT-
T ss_pred eeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCC-
Confidence 999998665 2355667666799999999999999988888773 58999999999986 59999986432
Q ss_pred CCCCEEEEEEEeeEEecC-CeEEEEEeecCC-----------CCceEEeEEEEeEEEecCC---ccEEEEeecCCCCCCC
Q 045402 257 DEEGVQNVTVWKTVFTGT-QNGLRIKSWARP-----------SNGFVKGVRFIDAVMQNVQ---NPIIIDQNYCPHNLNC 321 (396)
Q Consensus 257 ~~~~i~ni~i~n~~~~~~-~~gi~i~~~~~~-----------~~g~v~nI~~~ni~~~~~~---~~i~i~~~~~~~~~~~ 321 (396)
.+.++||+|+|++|.+. ..+|.|...+.. ..+.+++|+|+||++++.. .++.|... +.
T Consensus 474 -gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~~----- 546 (608)
T 2uvf_A 474 -GGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-TA----- 546 (608)
T ss_dssp -CCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-GG-----
T ss_pred -CceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-cC-----
Confidence 36699999999999998 589999876542 2367999999999999876 46666642 21
Q ss_pred CCCCcceEEEeEEEEeEEEecCCCceEEEecCCCCceecEEEEeEEEEeCCcccceeeecccccccceecCCC
Q 045402 322 PGQVSGVKISDIIYWNIRGTSSTPIAIKFNCSAKYPCEGIRLYKVNLSYLKLVAQSSCNNVIGKALGIVQPNT 394 (396)
Q Consensus 322 ~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~~~~~~i~~i~~~ni~i~~~~~~~~~~c~~v~~~~~~~~~~~~ 394 (396)
...+++||+|+||+++... +..+. .+++++|+||++...++...+.|.+|.+..+..+.|.|
T Consensus 547 ----~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~p 608 (608)
T 2uvf_A 547 ----NKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVAP 608 (608)
T ss_dssp ----GTBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC--
T ss_pred ----CCCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeCC
Confidence 2457999999999999865 44444 47899999999986654456999999999985455543
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.90 E-value=2.4e-22 Score=204.61 Aligned_cols=265 Identities=17% Similarity=0.184 Sum_probs=187.2
Q ss_pred CCeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCC---------cEEEEcCcEEEec-cccccCcccCccEEEEEcC-
Q 045402 27 TSSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNES---------TIIYVPKGRYLLG-SVAFKGECQSSDITFQIDG- 95 (396)
Q Consensus 27 ~~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g---------~~v~~p~G~Y~~~-~i~l~~~~~s~~v~l~~~G- 95 (396)
....++|+||||++||++|||+|||+||+++ ++.++ .+||||+|+|++. +|.++ + ++.|.+++
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a-~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~----~-~t~L~G~~~ 119 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAG-GRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL----Y-QTQLIGDAK 119 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTT-SCSCTTCCCCSSSCEEEEECSSEEEESSCEECC----T-TEEEEECSS
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHh-hhcccccccccccceEEEECCceEEEcccEEcc----C-CeEEEecCC
Confidence 3457799999999999999999999999864 43333 5999999999875 68888 7 99999985
Q ss_pred ---EEEeeccccccCCCcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCC
Q 045402 96 ---TLVAPADYRVLGQADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQ 172 (396)
Q Consensus 96 ---~l~~~~~~~~~~~~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~ 172 (396)
+|+...... . ..+ |.+...+++|..||... ...+..++|++|+ ++..++.
T Consensus 120 ~~pvIka~~~F~---G-~~l----------i~~d~y~~~G~~w~~~~------------~~F~r~irNlviD-~t~~~~~ 172 (758)
T 3eqn_A 120 NLPTLLAAPNFS---G-IAL----------IDADPYLAGGAQYYVNQ------------NNFFRSVRNFVID-LRQVSGS 172 (758)
T ss_dssp SCCEEEECTTCC---S-SCS----------EESSCBCGGGCBSSCGG------------GCCCEEEEEEEEE-CTTCSSC
T ss_pred CCCeEecCCCCC---C-cce----------eeccccCCCCccccccc------------cceeeeecceEEe-ccccCCC
Confidence 666643321 1 111 23323345566666422 2234556677776 5545566
Q ss_pred cceEEEeceecEEEEeEEEEcCCCCC-CCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCc-eEEEE
Q 045402 173 MYHIVINRCQDVLVEGAKIIAAGDSP-NTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGH-GISIG 250 (396)
Q Consensus 173 ~~~i~~~~~~nv~I~~~~i~~~~~~~-~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~-gi~ig 250 (396)
..+|++..|++..|+||.|..+.... ..+||+++.++...|+|++|..|+=|+.++. +..+++|.+|.++. +|.+.
T Consensus 173 ~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF~~~~taI~~~ 250 (758)
T 3eqn_A 173 ATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTFNNANTAINAI 250 (758)
T ss_dssp EEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEEESCSEEEEEE
T ss_pred ceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEEeChHHHHhhh
Confidence 78999999999999999999976543 4889999988999999999999998988865 67778888777764 66553
Q ss_pred eccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCC--CCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcce
Q 045402 251 SLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARP--SNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGV 328 (396)
Q Consensus 251 s~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~--~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 328 (396)
.. + ..++.+++|.++..||.+...... ..-.+--|.+.|.+++++..++... +.... ......
T Consensus 251 w~-w--------gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t~--~~~~~----~~~~sl 315 (758)
T 3eqn_A 251 WN-W--------GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWS--GASSG----HLQGSL 315 (758)
T ss_dssp EB-S--------CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEES--SCCCS----SCSSEE
T ss_pred cC-c--------eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEec--cCCCC----CCcceE
Confidence 21 1 356777777777788888642110 1224678999999999987555443 22211 112357
Q ss_pred EEEeEEEEeEEEe
Q 045402 329 KISDIIYWNIRGT 341 (396)
Q Consensus 329 ~i~ni~~~ni~~~ 341 (396)
.|+||.++|+...
T Consensus 316 vleNv~~~nv~~~ 328 (758)
T 3eqn_A 316 VLNNIQLTNVPVA 328 (758)
T ss_dssp EEEEEEEEEEEEE
T ss_pred EEEeEEeeCCCeE
Confidence 8999999987543
No 22
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.87 E-value=4.4e-20 Score=177.23 Aligned_cols=217 Identities=14% Similarity=0.192 Sum_probs=170.1
Q ss_pred cEEEEEc--CEEEeeccccccCC--------CcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEe
Q 045402 88 DITFQID--GTLVAPADYRVLGQ--------ADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITN 157 (396)
Q Consensus 88 ~v~l~~~--G~l~~~~~~~~~~~--------~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~ 157 (396)
+++|.+. |+|.+... ..|.. ...++.+.+++|++|+|-++.... .+.+.+.+
T Consensus 69 nv~I~G~~gG~IdG~G~-~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp-----------------~~~i~i~~ 130 (339)
T 2iq7_A 69 NININGASGHSIDCQGS-RWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP-----------------VQAFSINS 130 (339)
T ss_dssp SCEEEECTTCEEECCGG-GTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS-----------------SCCEEEES
T ss_pred cEEEEcCCCCEEECCcc-cccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC-----------------cceEEEec
Confidence 8999997 68876532 22321 134788888999999994443221 23589999
Q ss_pred ecceEEeceEEecCC--------cceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecC
Q 045402 158 SNNVSIKGLLSLNSQ--------MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGR 229 (396)
Q Consensus 158 ~~nv~i~~v~i~~~~--------~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~ 229 (396)
|+|++|+++++..++ .++|++..|+||+|+|++|.+ ..|+|.+.+++||+|+||.+..++ ||++++
T Consensus 131 ~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh-GisiGS 204 (339)
T 2iq7_A 131 ATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDCLAINSGTNITFTGGTCSGGH-GLSIGS 204 (339)
T ss_dssp CEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-CEEEEE
T ss_pred cCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCCEEEEcCCccEEEEeEEEECCc-eEEECc
Confidence 999999999999753 468999999999999999997 458999999999999999999976 699966
Q ss_pred -------CCeeEEEEeeeecCC-ceEEEEeccccCCCCCEEEEEEEeeEEecCCe-EEEEEeecCC--------CCceEE
Q 045402 230 -------GTNNLWIERVTCGPG-HGISIGSLGKDMDEEGVQNVTVWKTVFTGTQN-GLRIKSWARP--------SNGFVK 292 (396)
Q Consensus 230 -------~s~ni~i~n~~~~~~-~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~-gi~i~~~~~~--------~~g~v~ 292 (396)
+.+||+|+||++.+. +|+.|++... ..+.++||+|+|++|.+... ++.|...+.+ ....|+
T Consensus 205 lg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g--~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~ 282 (339)
T 2iq7_A 205 VGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG--ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTNGVPIT 282 (339)
T ss_dssp ESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT--CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEE
T ss_pred CCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC--CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCCCCceEE
Confidence 269999999999876 5899988532 23679999999999999765 9988764321 235799
Q ss_pred eEEEEeEEEecCC--ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecC
Q 045402 293 GVRFIDAVMQNVQ--NPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSS 343 (396)
Q Consensus 293 nI~~~ni~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~ 343 (396)
||+|+||+.+... .++.|. |+ ..+++||+|+||+++..
T Consensus 283 ni~~~ni~gt~~~~~~~~~i~---c~----------~~~c~ni~~~nv~i~~~ 322 (339)
T 2iq7_A 283 GLTLSKITGSVASSGTNVYIL---CA----------SGACSNWKWSGVSVTGG 322 (339)
T ss_dssp EEEEEEEEEEECTTSEEEEEE---CC----------TTCEEEEEEEEEEEESS
T ss_pred EEEEEeEEEEeCCCCEEEEEE---eC----------CCcEecEEEEeEEEEcC
Confidence 9999999999865 455553 22 13789999999999864
No 23
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.87 E-value=1.2e-19 Score=174.07 Aligned_cols=202 Identities=21% Similarity=0.282 Sum_probs=163.2
Q ss_pred eEEEEeecceEEece---EEecCC--cc-------------eEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEE
Q 045402 152 TLSITNSNNVSIKGL---LSLNSQ--MY-------------HIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKI 213 (396)
Q Consensus 152 ~i~~~~~~nv~i~~v---~i~~~~--~~-------------~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I 213 (396)
++.+. .+|++|+|. +|.... .| .+.+..|+|++|+++++.+++ .++|++..|++|+|
T Consensus 66 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVS-GSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEE-EESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEE-cCcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 45664 499999997 775432 23 489999999999999999863 46899999999999
Q ss_pred EccEEecC---------CceEEecCCCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEee
Q 045402 214 RSSSIKTG---------DDCISIGRGTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSW 283 (396)
Q Consensus 214 ~n~~i~~~---------dD~i~~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~ 283 (396)
+++++.+. .|||.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|.+.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcC
Confidence 99999862 57899988 999999999998775 6999662 8999999999975 79999886
Q ss_pred cCCCCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCCCceEEEec-------CC--
Q 045402 284 ARPSNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNC-------SA-- 354 (396)
Q Consensus 284 ~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~-------~~-- 354 (396)
.....+.++||+|+|+++.+..+++.|+.+.. +.+.++||+|+||++......|+.+.. .|
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 43245889999999999999999999997532 235899999999999976555777653 12
Q ss_pred CCceecEEEEeEEEEeCC--cccceee
Q 045402 355 KYPCEGIRLYKVNLSYLK--LVAQSSC 379 (396)
Q Consensus 355 ~~~i~~i~~~ni~i~~~~--~~~~~~c 379 (396)
..+++||+|+||+.+... ....+.|
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 358999999999998765 3344555
No 24
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.86 E-value=1.1e-19 Score=177.03 Aligned_cols=218 Identities=14% Similarity=0.153 Sum_probs=170.1
Q ss_pred cEEEEEcCEEEeeccc-------cccC------------CCcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCC
Q 045402 88 DITFQIDGTLVAPADY-------RVLG------------QADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPN 148 (396)
Q Consensus 88 ~v~l~~~G~l~~~~~~-------~~~~------------~~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~ 148 (396)
|++|.+.|+|.+.... ..|. ....++.+.+++|++|+|-++....
T Consensus 110 ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp---------------- 173 (376)
T 1bhe_A 110 NSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP---------------- 173 (376)
T ss_dssp SCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS----------------
T ss_pred eEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC----------------
Confidence 8999999999875431 2232 1235788999999999995543321
Q ss_pred CceeEEEEeecceEEeceEEecC----CcceEEEeceecEEEEeEEEEcCCCCCCCCceeee------cceeEEEEccEE
Q 045402 149 GATTLSITNSNNVSIKGLLSLNS----QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQ------QSRNVKIRSSSI 218 (396)
Q Consensus 149 ~~~~i~~~~~~nv~i~~v~i~~~----~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~------~s~nv~I~n~~i 218 (396)
.+.+.+..|+|++|+++++..+ ..++|++..|+||+|+|++|.+. .|+|.+. .|+||+|+||.+
T Consensus 174 -~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-----DDcIaiks~~~~~~s~nI~I~n~~~ 247 (376)
T 1bhe_A 174 -NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-----DDNVAIKAYKGRAETRNISILHNDF 247 (376)
T ss_dssp -SCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-----SCSEEEEECTTSCCEEEEEEEEEEE
T ss_pred -cEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-----CCeEEEcccCCCCCceEEEEEeeEE
Confidence 1357889999999999999874 35799999999999999999984 4789887 599999999999
Q ss_pred ecCCceEEecC---CCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCC----CCce
Q 045402 219 KTGDDCISIGR---GTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARP----SNGF 290 (396)
Q Consensus 219 ~~~dD~i~~~~---~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~----~~g~ 290 (396)
..+. ||++++ +.+||+|+||++.++. |+.|++... ..+.++||+|+|++|.+...+|.|...+.+ ....
T Consensus 248 ~~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~ 324 (376)
T 1bhe_A 248 GTGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKS--AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPD 324 (376)
T ss_dssp CSSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTT--TCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCE
T ss_pred Eccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecC--CCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcE
Confidence 9764 698865 5799999999999864 899987522 246699999999999999999999865432 2457
Q ss_pred EEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecC
Q 045402 291 VKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSS 343 (396)
Q Consensus 291 v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~ 343 (396)
++||+|+||+.+... ++.+. +. +..+++||+|+||+++..
T Consensus 325 i~ni~~~ni~gt~~~-~~~l~---g~---------~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 325 WSDITFKDVTSETKG-VVVLN---GE---------NAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp EEEEEEEEEEECSCC-EEEEE---CT---------TCSSCEEEEEEEEECCTT
T ss_pred EEEEEEEEEEEEecc-eEEEE---eC---------CCCCeeeEEEEeEEEecC
Confidence 999999999999754 45444 22 123568999999998764
No 25
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.86 E-value=1.2e-19 Score=175.40 Aligned_cols=202 Identities=17% Similarity=0.204 Sum_probs=161.0
Q ss_pred eEEEEeecceEEec---eEEecCC--cc------------eEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEE
Q 045402 152 TLSITNSNNVSIKG---LLSLNSQ--MY------------HIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIR 214 (396)
Q Consensus 152 ~i~~~~~~nv~i~~---v~i~~~~--~~------------~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~ 214 (396)
++.+ +.+|++|.| -+|.... .| .+.+..|+|++|+++++.+++ ..++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 4566 559999999 5665432 33 489999999999999999963 2469999 9999999
Q ss_pred ccEEecC---------CceEEecCCCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeec
Q 045402 215 SSSIKTG---------DDCISIGRGTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWA 284 (396)
Q Consensus 215 n~~i~~~---------dD~i~~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~ 284 (396)
|+++.+. .|||.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 9999872 57899987 999999999999876 6999762 8999999999985 799999863
Q ss_pred CCCCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCCCceEEEec---------CC-
Q 045402 285 RPSNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNC---------SA- 354 (396)
Q Consensus 285 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~---------~~- 354 (396)
....+.|+||+|+|+++.+..++++|+.+.. +.+.++||+|+||++......|+.+.. .|
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 3245899999999999999999999997532 245899999999999876444676642 12
Q ss_pred -CCceecEEEEeEEEEeCC--cccceeee
Q 045402 355 -KYPCEGIRLYKVNLSYLK--LVAQSSCN 380 (396)
Q Consensus 355 -~~~i~~i~~~ni~i~~~~--~~~~~~c~ 380 (396)
..+++||+|+||+.+..+ ....+.|.
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~ 330 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCG 330 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeC
Confidence 247999999999998765 23445543
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.86 E-value=2.2e-19 Score=172.07 Aligned_cols=216 Identities=17% Similarity=0.240 Sum_probs=168.7
Q ss_pred cEEEEEc--CEEEeeccccccCC--------CcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEe
Q 045402 88 DITFQID--GTLVAPADYRVLGQ--------ADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITN 157 (396)
Q Consensus 88 ~v~l~~~--G~l~~~~~~~~~~~--------~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~ 157 (396)
+++|.+. |+|.+... ..|.. ...++.+.+++|++|+|-++.... .+.+.+.
T Consensus 69 nv~I~G~~gG~IdG~G~-~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp-----------------~~~i~i~- 129 (336)
T 1nhc_A 69 DLTVTMADGAVIDGDGS-RWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP-----------------VQAISVQ- 129 (336)
T ss_dssp SCEEEECTTCEEECCGG-GTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS-----------------SCCEEEE-
T ss_pred CEEEEcCCCeEEECCcc-ccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC-----------------ccEEEEE-
Confidence 8999997 68876532 22321 134688888999999995543321 1258889
Q ss_pred ecceEEeceEEecCC--------cceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecC
Q 045402 158 SNNVSIKGLLSLNSQ--------MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGR 229 (396)
Q Consensus 158 ~~nv~i~~v~i~~~~--------~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~ 229 (396)
|+|++|+++++..++ .++|++..|+||+|+|++|.+ ..|+|.+.+++||+|+||++..++ ||++++
T Consensus 130 ~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh-GisiGS 203 (336)
T 1nhc_A 130 ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDDCIAINSGESISFTGGTCSGGH-GLSIGS 203 (336)
T ss_dssp EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSEEEEESSEEEEEEESCEEESSS-EEEEEE
T ss_pred eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCCEEEEeCCeEEEEEeEEEECCc-CceEcc
Confidence 999999999999752 468999999999999999998 458999998999999999999875 699966
Q ss_pred -------CCeeEEEEeeeecCC-ceEEEEeccccCCCCCEEEEEEEeeEEecCCe-EEEEEeecCC--------CCceEE
Q 045402 230 -------GTNNLWIERVTCGPG-HGISIGSLGKDMDEEGVQNVTVWKTVFTGTQN-GLRIKSWARP--------SNGFVK 292 (396)
Q Consensus 230 -------~s~ni~i~n~~~~~~-~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~-gi~i~~~~~~--------~~g~v~ 292 (396)
..+||+|+||++.+. .|+.|++... ..+.++||+|+|++|.+... ++.|...+.+ ....++
T Consensus 204 ~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g--~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~ 281 (336)
T 1nhc_A 204 VGGRDDNTVKNVTISDSTVSNSANGVRIKTIYK--ETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPSTGIPIT 281 (336)
T ss_dssp ESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT--CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEE
T ss_pred CccccCCCEEEEEEEeeEEECCCcEEEEEEECC--CCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCCCCceEE
Confidence 268999999999876 4899987522 24669999999999999765 9988754321 235799
Q ss_pred eEEEEeEEEecCC--ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecC
Q 045402 293 GVRFIDAVMQNVQ--NPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSS 343 (396)
Q Consensus 293 nI~~~ni~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~ 343 (396)
||+|+||+.+... .++.+. |+ ..+++||+|+||+++..
T Consensus 282 ~i~~~ni~gt~~~~~~~v~i~---c~----------~~~c~ni~~~nv~i~~~ 321 (336)
T 1nhc_A 282 DVTVDGVTGTLEDDATQVYIL---CG----------DGSCSDWTWSGVDLSGG 321 (336)
T ss_dssp EEEEEEEEEEECTTCEEEEEE---CC----------TTCEEEEEEEEEEEESS
T ss_pred EEEEEeEEEEeCCCCEEEEEE---cC----------CCcEecEEEEeEEEEcC
Confidence 9999999998765 455554 22 23789999999999864
No 27
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.86 E-value=2.1e-19 Score=172.96 Aligned_cols=218 Identities=15% Similarity=0.160 Sum_probs=168.3
Q ss_pred cEEEEE--cCEEEeeccccccC---------CCcceEEE-e-ceeceEEeceeEeCCCCcccccccccCCCCCCCceeEE
Q 045402 88 DITFQI--DGTLVAPADYRVLG---------QADNWLSF-E-GVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLS 154 (396)
Q Consensus 88 ~v~l~~--~G~l~~~~~~~~~~---------~~~~~i~~-~-~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~ 154 (396)
+++|.+ .|+|.+... ..|. ....++.+ . .++|++|+|-++.... .+.+.
T Consensus 70 ni~I~G~~~G~IdG~G~-~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp-----------------~~~i~ 131 (349)
T 1hg8_A 70 NITITGASGHVIDGNGQ-AYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP-----------------VHCFD 131 (349)
T ss_dssp SCEEEECTTCEEECCGG-GTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS-----------------SEEEE
T ss_pred cEEEEecCCCEEcCCcc-hhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC-----------------CceEE
Confidence 899999 478876432 2232 11236777 6 6779999995443321 24689
Q ss_pred EEeecceEEeceEEecCC----------------cceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEE
Q 045402 155 ITNSNNVSIKGLLSLNSQ----------------MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSI 218 (396)
Q Consensus 155 ~~~~~nv~i~~v~i~~~~----------------~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i 218 (396)
+.+|+|++|+++++.+++ .++|++..|+||+|+|++|.+ ..|+|.+.+++||+|+||.+
T Consensus 132 i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~ 206 (349)
T 1hg8_A 132 ITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVSNMYC 206 (349)
T ss_dssp EESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEEEEEE
T ss_pred EeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEEeEEE
Confidence 999999999999998742 468999999999999999997 45899999999999999999
Q ss_pred ecCCceEEecC-------CCeeEEEEeeeecCC-ceEEEEeccccCCCCCEEEEEEEeeEEecCC-eEEEEEeecCC---
Q 045402 219 KTGDDCISIGR-------GTNNLWIERVTCGPG-HGISIGSLGKDMDEEGVQNVTVWKTVFTGTQ-NGLRIKSWARP--- 286 (396)
Q Consensus 219 ~~~dD~i~~~~-------~s~ni~i~n~~~~~~-~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~-~gi~i~~~~~~--- 286 (396)
..++ ||++++ +.+||+|+||++.+. +|+.|++... ..+.++||+|+|++|.+.. .++.|...+.+
T Consensus 207 ~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g--~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~ 283 (349)
T 1hg8_A 207 SGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG--ATGTINNVTYQNIALTNISTYGVDVQQDYLNGGP 283 (349)
T ss_dssp ESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT--CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSB
T ss_pred eCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC--CCccccceEEEEEEEEccccccEEEEeeccCCCC
Confidence 9875 699965 268999999999875 4899987532 2366999999999999975 69998875421
Q ss_pred -----CCceEEeEEEEeEEEecCC--ccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC
Q 045402 287 -----SNGFVKGVRFIDAVMQNVQ--NPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST 344 (396)
Q Consensus 287 -----~~g~v~nI~~~ni~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~ 344 (396)
....|+||+|+||+.+... .++.+. |. ..+++||+|+||+++..+
T Consensus 284 ~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~---c~----------~~~c~ni~~~nv~i~~~~ 335 (349)
T 1hg8_A 284 TGKPTNGVKISNIKFIKVTGTVASSAQDWFIL---CG----------DGSCSGFTFSGNAITGGG 335 (349)
T ss_dssp CSCCCSSEEEEEEEEEEEEEEECTTSEEEEEE---CC----------SSCEEEEEEESCEEECCS
T ss_pred CCcccCCceEEEEEEEeEEEEeCCCCEEEEEE---eC----------CCcCcCEEEEeEEEEcCC
Confidence 1257999999999998755 355553 22 137899999999998643
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.82 E-value=1.9e-18 Score=170.30 Aligned_cols=196 Identities=12% Similarity=0.112 Sum_probs=157.0
Q ss_pred cceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEec---CCcceEEEeceecEEE
Q 045402 110 DNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLN---SQMYHIVINRCQDVLV 186 (396)
Q Consensus 110 ~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~---~~~~~i~~~~~~nv~I 186 (396)
..++.+..++|++|+|-++.... .+.+.+..|+|++|+|++|.. +..++|++.. +||+|
T Consensus 127 p~~i~~~~~~nv~I~~iti~nsp-----------------~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I 188 (422)
T 1rmg_A 127 ARILRLTDVTHFSVHDIILVDAP-----------------AFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWV 188 (422)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCS-----------------SCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEE
T ss_pred ceEEEEcccceEEEECeEEECCC-----------------ceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEE
Confidence 45788888999999995543221 135899999999999999987 2357999999 99999
Q ss_pred EeEEEEcCCCCCCCCceeeec-ceeEEEEccEEecCCceEEecC-----CCeeEEEEeeeecCC-ceEEEEeccccCCCC
Q 045402 187 EGAKIIAAGDSPNTDGIHIQQ-SRNVKIRSSSIKTGDDCISIGR-----GTNNLWIERVTCGPG-HGISIGSLGKDMDEE 259 (396)
Q Consensus 187 ~~~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~~dD~i~~~~-----~s~ni~i~n~~~~~~-~gi~igs~~~~~~~~ 259 (396)
+|++|.+ ..|+|.+.+ ++||+|+||++..+. ||++++ ..+||+|+||++.+. .|+.|++.+ ..+
T Consensus 189 ~n~~i~~-----gDD~Iai~s~~~nI~I~n~~~~~~~-GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~---g~G 259 (422)
T 1rmg_A 189 HDVEVTN-----KDECVTVKSPANNILVESIYCNWSG-GCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNG---GSG 259 (422)
T ss_dssp EEEEEES-----SSEEEEEEEEEEEEEEEEEEEESSS-EEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBB---CCE
T ss_pred EeeEEeC-----CCCeEEeCCCCcCEEEEeEEEcCCc-ceeecccCCCCcEEEEEEEeEEEeccceEEEEEecC---CCc
Confidence 9999997 458999987 999999999987765 999965 268999999999875 589998743 235
Q ss_pred CEEEEEEEeeEEecCCeEEEEEeecC------CCCceEEeEEEEeEEEecC----CccEEEEeecCCCCCCCCCCCcceE
Q 045402 260 GVQNVTVWKTVFTGTQNGLRIKSWAR------PSNGFVKGVRFIDAVMQNV----QNPIIIDQNYCPHNLNCPGQVSGVK 329 (396)
Q Consensus 260 ~i~ni~i~n~~~~~~~~gi~i~~~~~------~~~g~v~nI~~~ni~~~~~----~~~i~i~~~~~~~~~~~~~~~~~~~ 329 (396)
.++||+|+|++|.+...++.|...+. .....++||+|+||+.+.. ..++.|.. . +..+
T Consensus 260 ~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~---~---------~~~~ 327 (422)
T 1rmg_A 260 TVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEANGATRPPIRVVC---S---------DTAP 327 (422)
T ss_dssp EEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESCTTTSCSEEEEC---B---------TTBC
T ss_pred EEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEEEEeEEEEecccccceeEEEEe---C---------CCCc
Confidence 79999999999999888999886432 1346899999999999864 23566653 1 2347
Q ss_pred EEeEEEEeEEEecCC
Q 045402 330 ISDIIYWNIRGTSST 344 (396)
Q Consensus 330 i~ni~~~ni~~~~~~ 344 (396)
++||+|+||+++...
T Consensus 328 ~~ni~l~nv~i~~~~ 342 (422)
T 1rmg_A 328 CTDLTLEDIAIWTES 342 (422)
T ss_dssp EEEEEEEEEEEEESS
T ss_pred EeeEEEEeEEEEcCC
Confidence 899999999998654
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.81 E-value=5e-18 Score=162.24 Aligned_cols=215 Identities=15% Similarity=0.154 Sum_probs=164.4
Q ss_pred cEEEEEc-CEEEeeccccccCC--------CcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEee
Q 045402 88 DITFQID-GTLVAPADYRVLGQ--------ADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNS 158 (396)
Q Consensus 88 ~v~l~~~-G~l~~~~~~~~~~~--------~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (396)
+++|.+. |+|-+... ..|.. ...++.+.+++ ++|+|-++.... .+.+.+..|
T Consensus 67 ni~I~G~~G~idG~G~-~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp-----------------~~~i~i~~~ 127 (335)
T 1k5c_A 67 GINFVGADHIFDGNGA-LYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP-----------------AQAISVGPT 127 (335)
T ss_dssp EEEEECTTCEEECCGG-GTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS-----------------SCCEEEEEE
T ss_pred CEEEEeCccEEcCChh-HhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC-----------------cceEEEEcc
Confidence 8999994 89976532 22321 13467788888 999995543321 235899999
Q ss_pred cc-eEEeceEEecCC---------cceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEec
Q 045402 159 NN-VSIKGLLSLNSQ---------MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIG 228 (396)
Q Consensus 159 ~n-v~i~~v~i~~~~---------~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~ 228 (396)
+| ++|+++++..+. .+++++ .|+||+|+|++|.+. .|+|.+.+++||+|+||.+..++ ||+++
T Consensus 128 ~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~g-----DDcIaiksg~nI~i~n~~~~~gh-GisIG 200 (335)
T 1k5c_A 128 DAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQ-----DDCIAINDGNNIRFENNQCSGGH-GISIG 200 (335)
T ss_dssp EEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESS-----SCSEEEEEEEEEEEESCEEESSC-CEEEE
T ss_pred CCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcC-----CCEEEeeCCeeEEEEEEEEECCc-cCeEe
Confidence 99 999999998752 368999 999999999999984 57899998899999999999875 69886
Q ss_pred C-----CCeeEEEEeeeecCC-ceEEEEeccccCCC-CCEEEEEEEeeEEecCC-eEEEEEeecC-----C-CCceEEeE
Q 045402 229 R-----GTNNLWIERVTCGPG-HGISIGSLGKDMDE-EGVQNVTVWKTVFTGTQ-NGLRIKSWAR-----P-SNGFVKGV 294 (396)
Q Consensus 229 ~-----~s~ni~i~n~~~~~~-~gi~igs~~~~~~~-~~i~ni~i~n~~~~~~~-~gi~i~~~~~-----~-~~g~v~nI 294 (396)
+ +.+||+|+||++.+. .|+.|++... .. +.++||+|+|++|.+.. .++.|...++ + ....++||
T Consensus 201 S~g~~~~v~nV~v~n~~~~~t~~girIKt~~g--~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~~~~i~nI 278 (335)
T 1k5c_A 201 SIATGKHVSNVVIKGNTVTRSMYGVRIKAQRT--ATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGTGAPFSDV 278 (335)
T ss_dssp EECTTCEEEEEEEESCEEEEEEEEEEEEEETT--CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCSSSCEEEE
T ss_pred eccCCCCEEEEEEEeeEEECCCceEEEEEeCC--CCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCCCceEEEE
Confidence 5 258999999999876 4899987532 23 56999999999999976 6998886432 1 23579999
Q ss_pred EEEeEEEe--cC--CccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC
Q 045402 295 RFIDAVMQ--NV--QNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST 344 (396)
Q Consensus 295 ~~~ni~~~--~~--~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~ 344 (396)
+|+||+++ .. ..++.+. |. . +++||+|+||+++..+
T Consensus 279 ~~~nI~~~Gt~~~~~~~i~i~---c~----------~-~c~ni~~~nv~i~~~~ 318 (335)
T 1k5c_A 279 NFTGGATTIKVNNAATRVTVE---CG----------N-CSGNWNWSQLTVTGGK 318 (335)
T ss_dssp EECSSCEEEEECTTCEEEEEE---CS----------S-EESEEEEEEEEEESSB
T ss_pred EEEEEEEeeEEcCCceEEEEE---CC----------C-cCCCEEEEeEEEEcCC
Confidence 99999944 32 2355554 21 2 7999999999998764
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.79 E-value=8.4e-18 Score=170.06 Aligned_cols=235 Identities=14% Similarity=0.116 Sum_probs=168.0
Q ss_pred CCcE-EEEcCcEEEeccccccCcccCccEEEEEcCEEEeeccc------cccCC---CcceEEEe------ceeceEEec
Q 045402 62 ESTI-IYVPKGRYLLGSVAFKGECQSSDITFQIDGTLVAPADY------RVLGQ---ADNWLSFE------GVSGVSIIG 125 (396)
Q Consensus 62 ~g~~-v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G~l~~~~~~------~~~~~---~~~~i~~~------~~~nv~I~G 125 (396)
.+-+ |++++|.++.+.+.+.+. . |++|.+.|+|.+.... ..|.. ....+.+. +++||.|+|
T Consensus 263 Snvt~L~L~~GA~l~g~i~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 263 SNTYWVYLAPGAYVKGAIEYFTK--Q-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TTCCEEEECTTEEEESCEEECCS--S-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCCceEEecCCcEEEccEEEeCc--e-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 3566 999999999998888764 5 9999999999765311 01111 11223333 899999999
Q ss_pred -eeEeCCCCcccccccccCCCCCCCceeEEEEeecce--EEeceEEecCC---cceEEEeceecEEEEeEEEEcCCCCCC
Q 045402 126 -GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNV--SIKGLLSLNSQ---MYHIVINRCQDVLVEGAKIIAAGDSPN 199 (396)
Q Consensus 126 -G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv--~i~~v~i~~~~---~~~i~~~~~~nv~I~~~~i~~~~~~~~ 199 (396)
..++. .+| .+.+.+|+|+ +|+++++.+++ .++|++. +||+|+||+|.+.
T Consensus 340 iti~NS---p~w---------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g----- 394 (574)
T 1ogo_X 340 PTINAP---PFN---------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN----- 394 (574)
T ss_dssp CEEECC---SSC---------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES-----
T ss_pred eEEECC---CCc---------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC-----
Confidence 55553 223 4778899999 99999988643 4689998 9999999999994
Q ss_pred CCceeeecceeEEEEccEEecCC-ce-EEecC---CCeeEEEEeeeecCCc---------eEEEEeccccCC------CC
Q 045402 200 TDGIHIQQSRNVKIRSSSIKTGD-DC-ISIGR---GTNNLWIERVTCGPGH---------GISIGSLGKDMD------EE 259 (396)
Q Consensus 200 ~DGi~~~~s~nv~I~n~~i~~~d-D~-i~~~~---~s~ni~i~n~~~~~~~---------gi~igs~~~~~~------~~ 259 (396)
.|+|.+.+ +||+|+||.++.+. .+ |.+++ ..+||+|+||++.+.. +..+|+...+.+ ..
T Consensus 395 DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~ 473 (574)
T 1ogo_X 395 DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRK 473 (574)
T ss_dssp SCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEE
T ss_pred CCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCc
Confidence 47898876 99999999999865 35 89875 3699999999996532 444555422110 11
Q ss_pred CEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEec------CCc-cEEEEeecCCCCCCCCCCCcceEEEe
Q 045402 260 GVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQN------VQN-PIIIDQNYCPHNLNCPGQVSGVKISD 332 (396)
Q Consensus 260 ~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~n 332 (396)
.+ ||+|+|++|.+...++ +... +.+.++||+|+||++++ ... +..+... . ..++|
T Consensus 474 gV-NI~f~NI~~~~v~~~i-i~i~---p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~------------~-~~v~n 535 (574)
T 1ogo_X 474 SI-SMTVSNVVCEGLCPSL-FRIT---PLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA------------S-GLTMG 535 (574)
T ss_dssp EE-EEEEEEEEECSSBCEE-EEEC---CSEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC------------T-TCCEE
T ss_pred eE-EEEEEeEEEEceeEee-EEEC---CCCCEEEEEEEeEEEeCccccccccccceeEecC------------C-Cccce
Confidence 28 9999999999987775 4432 45689999999999986 211 1111110 1 35799
Q ss_pred EEEEeEEEecC
Q 045402 333 IIYWNIRGTSS 343 (396)
Q Consensus 333 i~~~ni~~~~~ 343 (396)
|+|+||++.+.
T Consensus 536 I~~~NV~i~g~ 546 (574)
T 1ogo_X 536 LAISAWTIGGQ 546 (574)
T ss_dssp EEEEEEEETTE
T ss_pred EEEEeEEEeCE
Confidence 99999988653
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.79 E-value=6.1e-18 Score=171.14 Aligned_cols=250 Identities=13% Similarity=0.169 Sum_probs=169.7
Q ss_pred CCCcE-EEEcCcEEEeccccccCcccCccEEEEEcCEEEeeccc------cccCC----CcceEEE------eceeceEE
Q 045402 61 NESTI-IYVPKGRYLLGSVAFKGECQSSDITFQIDGTLVAPADY------RVLGQ----ADNWLSF------EGVSGVSI 123 (396)
Q Consensus 61 ~~g~~-v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G~l~~~~~~------~~~~~----~~~~i~~------~~~~nv~I 123 (396)
+.+.+ |++++|.|+.+++.+...+ . |++|.+.|+|.+.... ..|.. ....+.+ .+++||.|
T Consensus 220 ~s~~~~L~l~~GA~L~gs~~~~~~~-~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKGAVEFLSTA-S-EVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp CTTCCEEEECTTEEEESCEEECCCS-S-EEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred cCCCCeEecCCCCEEEEEEEEecCc-e-eEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 44667 9999999998887766221 4 8999999999875421 11211 1122333 78999999
Q ss_pred ec-eeEeCCCCcccccccccCCCCCCCceeEEEE-ee-cc--eEEeceEEecCC---cceEEEeceecEEEEeEEEEcCC
Q 045402 124 IG-GALDAKGTSLWACKAAAGTTCPNGATTLSIT-NS-NN--VSIKGLLSLNSQ---MYHIVINRCQDVLVEGAKIIAAG 195 (396)
Q Consensus 124 ~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~-~~-~n--v~i~~v~i~~~~---~~~i~~~~~~nv~I~~~~i~~~~ 195 (396)
+| ...+.. +| .+.+. .| ++ ++|+++++..+. .+++++. +||+|+|++|.+.
T Consensus 298 ~Giti~Nsp---~w---------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~g- 356 (549)
T 1x0c_A 298 NGVTVSAPP---FN---------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTD- 356 (549)
T ss_dssp ESCEEECCS---SC---------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEES-
T ss_pred ECcEEECCC---ce---------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCC-
Confidence 99 554432 23 35544 45 69 999999997643 4689888 9999999999994
Q ss_pred CCCCCCceeeecceeEEEEccEEecCC-ce-EEecC---CCeeEEEEeeeecCCc-------eEEEEecccc--C-----
Q 045402 196 DSPNTDGIHIQQSRNVKIRSSSIKTGD-DC-ISIGR---GTNNLWIERVTCGPGH-------GISIGSLGKD--M----- 256 (396)
Q Consensus 196 ~~~~~DGi~~~~s~nv~I~n~~i~~~d-D~-i~~~~---~s~ni~i~n~~~~~~~-------gi~igs~~~~--~----- 256 (396)
.|+|.+.+ +||+|+||.+..+. .+ |.+++ ..+||+|+||++.++. |..|++...+ .
T Consensus 357 ----DDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~ 431 (549)
T 1x0c_A 357 ----DDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLS 431 (549)
T ss_dssp ----SCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCC
T ss_pred ----CCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccC
Confidence 47898876 99999999998754 45 88875 3689999999997643 4225441111 1
Q ss_pred -C-CCCEEEEEEEeeEEecCC-eEEEEEeecCCCCceEEeEEEEeEEEecCC-----ccEEEEeecCCCCCCCCCCCcce
Q 045402 257 -D-EEGVQNVTVWKTVFTGTQ-NGLRIKSWARPSNGFVKGVRFIDAVMQNVQ-----NPIIIDQNYCPHNLNCPGQVSGV 328 (396)
Q Consensus 257 -~-~~~i~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~-----~~i~i~~~~~~~~~~~~~~~~~~ 328 (396)
+ .+.++||+|+|++|.+.. .|+.+....+..++.++||+|+||+++... ....+...+..- .|. ...
T Consensus 432 ~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~--~~~---~~~ 506 (549)
T 1x0c_A 432 SNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDL--NNG---KQI 506 (549)
T ss_dssp SCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBT--TTC---CBC
T ss_pred cCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCcc--ccc---cce
Confidence 2 457999999999998865 555432222224567999999999998765 222222211110 011 124
Q ss_pred EEEeEEEEeEEEecC
Q 045402 329 KISDIIYWNIRGTSS 343 (396)
Q Consensus 329 ~i~ni~~~ni~~~~~ 343 (396)
+++||+|+||++.+.
T Consensus 507 ~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 507 TVTDFSIEGFTVGNT 521 (549)
T ss_dssp CEEEEEEEEEEETTE
T ss_pred eeeeEEEEeEEEeCe
Confidence 799999999988754
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.69 E-value=7.2e-16 Score=147.17 Aligned_cols=230 Identities=15% Similarity=0.170 Sum_probs=167.8
Q ss_pred CCeeeEEeec----cccCCCCcccHHHHHHHHHHHhh------cCCCcEEEEcCcEEE-eccccccCcccCccEEEEEcC
Q 045402 27 TSSVYNVLRF----GAKGNGVIDSTEAFAKAWAAACA------SNESTIIYVPKGRYL-LGSVAFKGECQSSDITFQIDG 95 (396)
Q Consensus 27 ~~~~~~v~d~----Ga~~dg~tddt~aiq~Ai~~a~~------~~~g~~v~~p~G~Y~-~~~i~l~~~~~s~~v~l~~~G 95 (396)
....|+|++| +|++|+.+|++++|+++|++..+ +.+|++|++|+|+|+ .+++.+.. + .++|.+++
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdk---p-~LtL~G~~ 86 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDV---S-YLTIAGFG 86 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECC---T-TEEEECSC
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEec---C-cEEEEecC
Confidence 3579999999 89999999999999999987643 467999999999997 48888872 3 69999865
Q ss_pred --E----EEeeccccc----cCCC-----------cceEEEec-----eeceEEeceeEeCCCCcccccccccCCCCCCC
Q 045402 96 --T----LVAPADYRV----LGQA-----------DNWLSFEG-----VSGVSIIGGALDAKGTSLWACKAAAGTTCPNG 149 (396)
Q Consensus 96 --~----l~~~~~~~~----~~~~-----------~~~i~~~~-----~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~ 149 (396)
+ |........ |+.. ++.|.++. .++|++.|.+|+|-...-|- ......
T Consensus 87 ~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~v~I~G~~~~~~G------~s~~~~ 160 (410)
T 2inu_A 87 HGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPGK------NSYHNG 160 (410)
T ss_dssp CCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEESCEEECCCCSSST------TSCCCS
T ss_pred CCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECCEEEECCEeecCC------CCcccC
Confidence 3 331111112 1111 22333332 27777777667665221111 112223
Q ss_pred ceeEEEEe-ecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCCCCCCCceeeec-ceeEEEEccEEecCCce--E
Q 045402 150 ATTLSITN-SNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQ-SRNVKIRSSSIKTGDDC--I 225 (396)
Q Consensus 150 ~~~i~~~~-~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~~dD~--i 225 (396)
..+|.+.. .++++|++..|.+. .++|.+..+++++|++.+|.. ...||++++ ++...|+++.+..++|| |
T Consensus 161 dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~~dG~gI 234 (410)
T 2inu_A 161 KTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAGPDGVTL 234 (410)
T ss_dssp CEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECCTTSEEE
T ss_pred ceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeecCCCCEE
Confidence 55677765 88999999999887 689999999999999999995 457899997 89999999999998887 8
Q ss_pred EecCCCeeEEEEeeee-cCC-ceEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEe
Q 045402 226 SIGRGTNNLWIERVTC-GPG-HGISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKS 282 (396)
Q Consensus 226 ~~~~~s~ni~i~n~~~-~~~-~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~ 282 (396)
.++. +++.+|+++.+ ..+ .|+.+- ...+..|+++.+.+...|+.+..
T Consensus 235 yl~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 235 LAEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp EEES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEEEE
T ss_pred EEEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEEEE
Confidence 8888 88889999876 434 477662 22356789999998888886654
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.54 E-value=9.9e-12 Score=124.99 Aligned_cols=243 Identities=13% Similarity=0.111 Sum_probs=155.4
Q ss_pred cEEEEEcCEEEeeccc--cccC----CCcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecce
Q 045402 88 DITFQIDGTLVAPADY--RVLG----QADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNV 161 (396)
Q Consensus 88 ~v~l~~~G~l~~~~~~--~~~~----~~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv 161 (396)
|++|.+. +|.+.... ..|. ....++.+.+++|+.|++-++...+.
T Consensus 107 NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~---------------------------- 157 (609)
T 3gq8_A 107 NIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTL---------------------------- 157 (609)
T ss_dssp EEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSS----------------------------
T ss_pred cEEEEee-EEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCC----------------------------
Confidence 7777765 66542211 1121 11357889999999999944422111
Q ss_pred EEeceEEecCCc-ceEEEec------eecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecC-----CceEEecC
Q 045402 162 SIKGLLSLNSQM-YHIVINR------CQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTG-----DDCISIGR 229 (396)
Q Consensus 162 ~i~~v~i~~~~~-~~i~~~~------~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~~~~ 229 (396)
+++++.++.. ++++++. |+||+|+||+|++. ..|||.+.+|+||+|+||+++.+ ..||.++.
T Consensus 158 --~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~t----GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGs 231 (609)
T 3gq8_A 158 --HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDD 231 (609)
T ss_dssp --CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECT
T ss_pred --CCeEEeCCCCCccccCCCccccccceeEEEEeeEEEec----CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccC
Confidence 1222222211 4555566 99999999999764 45899999999999999999654 57899998
Q ss_pred CCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeec-----CCCCceEEeEEEEeEEEec
Q 045402 230 GTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWA-----RPSNGFVKGVRFIDAVMQN 303 (396)
Q Consensus 230 ~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~-----~~~~g~v~nI~~~ni~~~~ 303 (396)
+++||+|+||++.++. |+.|++.+ +.+.++||+|.|+...+.-+...+.... .+.....+||.+.|++...
T Consensus 232 gs~NVtV~Nc~i~nt~~GIrIKt~~---~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~ 308 (609)
T 3gq8_A 232 GSRHVVLSNNRSKGCYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIR 308 (609)
T ss_dssp TCEEEEEESEEEESSSEEEEEEECT---TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEES
T ss_pred CcccEEEEeeEEECCCCEEEEEecC---CCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEe
Confidence 8899999999999875 89998763 2456899999998766543433333221 1234468999999999876
Q ss_pred CCc-----------cEEEEe----------ecCCCCCCCCCCCcc----eEEEeEEEEeEEEecCC--CceEEEecCCCC
Q 045402 304 VQN-----------PIIIDQ----------NYCPHNLNCPGQVSG----VKISDIIYWNIRGTSST--PIAIKFNCSAKY 356 (396)
Q Consensus 304 ~~~-----------~i~i~~----------~~~~~~~~~~~~~~~----~~i~ni~~~ni~~~~~~--~~~~~i~~~~~~ 356 (396)
..+ ++.+.. .+.++.-. .+ .+. ..-+|++|++|.+++-+ ...+++.|.+ +
T Consensus 309 p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~-~~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~ 385 (609)
T 3gq8_A 309 PNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNL-LT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-R 385 (609)
T ss_dssp CCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTS-CC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-C
T ss_pred ecccCceeeCCCcceEEEEcCCCeEEcCceEccCCccc-cC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-C
Confidence 431 233221 11111110 11 122 23489999999998743 3466676643 4
Q ss_pred ceecEEEEeEEEEeC
Q 045402 357 PCEGIRLYKVNLSYL 371 (396)
Q Consensus 357 ~i~~i~~~ni~i~~~ 371 (396)
.++.|+++|+.+...
T Consensus 386 ~~~~v~i~n~~i~~s 400 (609)
T 3gq8_A 386 GGDAVNISNVTLNNS 400 (609)
T ss_dssp TTCCEEEEEEEEESC
T ss_pred cCCeEEEeccEEeec
Confidence 667777777777643
No 34
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.53 E-value=1.4e-11 Score=125.95 Aligned_cols=243 Identities=13% Similarity=0.105 Sum_probs=152.3
Q ss_pred cEEEEEcCEEEeeccc--cccC----CCcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecce
Q 045402 88 DITFQIDGTLVAPADY--RVLG----QADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNV 161 (396)
Q Consensus 88 ~v~l~~~G~l~~~~~~--~~~~----~~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv 161 (396)
|++|.+. +|.+.... ..|. ....+|.+.+++|++|++-++.....
T Consensus 107 NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~---------------------------- 157 (772)
T 3gqn_A 107 NIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTL---------------------------- 157 (772)
T ss_dssp EEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSS----------------------------
T ss_pred eEEEEee-EEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCC----------------------------
Confidence 7777765 66542221 0011 11357889999999999944422111
Q ss_pred EEeceEEecCCc-ceEEEec------eecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecC-----CceEEecC
Q 045402 162 SIKGLLSLNSQM-YHIVINR------CQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTG-----DDCISIGR 229 (396)
Q Consensus 162 ~i~~v~i~~~~~-~~i~~~~------~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~~~~ 229 (396)
+++++.++.. ++++++. |+||+|+||+|++. ..|+|.+.+|+||+|+||.+..+ ..||.+++
T Consensus 158 --~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~nt----GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGs 231 (772)
T 3gqn_A 158 --HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDD 231 (772)
T ss_dssp --CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECT
T ss_pred --CCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEec----CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecC
Confidence 1222222211 4555555 99999999999764 45899999999999999999654 57899998
Q ss_pred CCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCe--EEEEEeec---CCCCceEEeEEEEeEEEec
Q 045402 230 GTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQN--GLRIKSWA---RPSNGFVKGVRFIDAVMQN 303 (396)
Q Consensus 230 ~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~--gi~i~~~~---~~~~g~v~nI~~~ni~~~~ 303 (396)
+++||+|+||++.++. |+.|++.+ +.+.++||+|.++......+ .++.-... .+..-...||.+.|++...
T Consensus 232 gs~NVtV~Nc~~~nT~nGIRIKt~~---~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~ 308 (772)
T 3gqn_A 232 GSRHVVLSNNRSKGCYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIR 308 (772)
T ss_dssp TCEEEEEEEEEEESSSEEEEECCCT---TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEES
T ss_pred CcccEEEEceEEECCCcEEEEEEeC---CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEc
Confidence 8899999999998875 89998763 34568999999755554323 33321111 1122357889999988865
Q ss_pred CC-c----------cEEEEe----------ecCCCCCCCCCCCcc----eEEEeEEEEeEEEecCC--CceEEEecCCCC
Q 045402 304 VQ-N----------PIIIDQ----------NYCPHNLNCPGQVSG----VKISDIIYWNIRGTSST--PIAIKFNCSAKY 356 (396)
Q Consensus 304 ~~-~----------~i~i~~----------~~~~~~~~~~~~~~~----~~i~ni~~~ni~~~~~~--~~~~~i~~~~~~ 356 (396)
.. . ++.+.. .+.++.-. .+ .+. ..-+|++|++|.+++-+ ...+.+.|.+ +
T Consensus 309 P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~-~~-~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~ 385 (772)
T 3gqn_A 309 PNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNL-LT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-R 385 (772)
T ss_dssp CCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTS-CC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-T
T ss_pred ccccCceeeCCCcceEEEEcCCCcEecCceeccCcccc-cC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-C
Confidence 43 1 233221 11111100 11 122 23489999999998743 3466676653 5
Q ss_pred ceecEEEEeEEEEeC
Q 045402 357 PCEGIRLYKVNLSYL 371 (396)
Q Consensus 357 ~i~~i~~~ni~i~~~ 371 (396)
.++.|+++|+.+...
T Consensus 386 ~~~~v~i~n~~i~~s 400 (772)
T 3gqn_A 386 GGDAVNISNVTLNNS 400 (772)
T ss_dssp CCEEEEEEEEEEESC
T ss_pred CCCeEEEeccEEeec
Confidence 677888888877654
No 35
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.44 E-value=3.8e-12 Score=125.92 Aligned_cols=159 Identities=16% Similarity=0.133 Sum_probs=120.0
Q ss_pred EeecceEEece----EEecC-----CcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEE
Q 045402 156 TNSNNVSIKGL----LSLNS-----QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCIS 226 (396)
Q Consensus 156 ~~~~nv~i~~v----~i~~~-----~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 226 (396)
.+.+|++|+|- .+... ....+.+..|+|++|+++++.+.+ .+..|.+|.+. ..||+.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 46778888875 44322 123578899999999999999742 13345555443 357787
Q ss_pred ecCCCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEee-----cCCCCceEEeEEEEeEE
Q 045402 227 IGRGTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSW-----ARPSNGFVKGVRFIDAV 300 (396)
Q Consensus 227 ~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~-----~~~~~g~v~nI~~~ni~ 300 (396)
+ .++||+|+||++..++ ++ |+. ....++||+|+||++.+ ..|++|+++ .. ..|.++||+|+|++
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~ 241 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNY-KQGGIRNIFADNIR 241 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHH-TCCEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccC-CCCcEEEEEEEeEE
Confidence 7 4799999999999875 45 321 23578999999999999 799999987 44 56899999999999
Q ss_pred EecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCCCceEEEec
Q 045402 301 MQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNC 352 (396)
Q Consensus 301 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~ 352 (396)
|+++..++.|++. ...++||+|+||+++... .++.+..
T Consensus 242 ~~nv~~~I~I~p~-------------~~~isnItfeNI~~t~~~-~aI~i~q 279 (464)
T 1h80_A 242 CSKGLAAVMFGPH-------------FMKNGDVQVTNVSSVSCG-SAVRSDS 279 (464)
T ss_dssp EESSSEEEEEECT-------------TCBCCCEEEEEEEEESSS-CSEEECC
T ss_pred EECCceeEEEeCC-------------CceEeEEEEEEEEEEccc-eeEEEec
Confidence 9999999999831 125799999999999854 4666653
No 36
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.44 E-value=4.1e-12 Score=127.13 Aligned_cols=227 Identities=10% Similarity=-0.021 Sum_probs=150.8
Q ss_pred cEEEEEcCEEEeeccccccCCC-----cceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEE---Eeec
Q 045402 88 DITFQIDGTLVAPADYRVLGQA-----DNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSI---TNSN 159 (396)
Q Consensus 88 ~v~l~~~G~l~~~~~~~~~~~~-----~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~---~~~~ 159 (396)
|++|.+.|+|-+... ..|... ++.+.+.+++ |+|-++... .. .+.+.+ ..|+
T Consensus 151 NItItG~GtIDGqG~-~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS-DP---------------~w~I~iG~~~~c~ 210 (600)
T 2x6w_A 151 NCHIYGHGVVDFGGY-EFGASSQLRNGVAFGRSYNCS---VTGITFQNG-DV---------------TWAITLGWNGYGS 210 (600)
T ss_dssp EEEEESSCEEECTTC-CCSSTTCCEEEEECCSEEEEE---EESCEEESC-CC---------------SCSEEECBTTBEE
T ss_pred eEEEecceeeeCCcc-ccccccccCCCCCEEEEeeeE---EeCeEEECC-CC---------------ccEEEeCCCCCcc
Confidence 899999999887432 223211 2334444444 777443221 01 134778 8899
Q ss_pred ceEEeceE----EecCC-cceEEEeceecEEEEeEEEEcCCCCCCCCceee-ecce--eEEEEccEEecCCceEEecC--
Q 045402 160 NVSIKGLL----SLNSQ-MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHI-QQSR--NVKIRSSSIKTGDDCISIGR-- 229 (396)
Q Consensus 160 nv~i~~v~----i~~~~-~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~-~~s~--nv~I~n~~i~~~dD~i~~~~-- 229 (396)
|++|+|++ +.+++ .++| |+|+|++|.+. .|+|.+ .+.+ ++.++ .+..+..||++++
T Consensus 211 NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tG-----DDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~ 276 (600)
T 2x6w_A 211 NCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGV-----ESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTV 276 (600)
T ss_dssp EEEEESCEEECCCCCSSCCCEE-------EEEECSSSEEE-----ESCEEECCCTTHHHHEEE--EEECSSSEEEESCEE
T ss_pred cEEEeCeEEcceEecCCCCCEE-------EEEEeeEEecC-----CcEEEEecCCCcCCeEEE--EEcCCCCcEEecccc
Confidence 99999999 66633 4677 99999999984 478999 6432 45666 5566777999987
Q ss_pred --CCeeEEEEeeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeec-CCCCceEEeEEEEeEEEecCCc
Q 045402 230 --GTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWA-RPSNGFVKGVRFIDAVMQNVQN 306 (396)
Q Consensus 230 --~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~-~~~~g~v~nI~~~ni~~~~~~~ 306 (396)
+.+||+|+| .+.... ...+.++||+|+|++|.+...++.+.... ++..+.|+||+|+||+.+....
T Consensus 277 ~ggV~NV~V~N-rIKt~~----------G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~ 345 (600)
T 2x6w_A 277 NGYCRGAYVVM-HAAEAA----------GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGER 345 (600)
T ss_dssp EEESEEEEEEE-CGGGCT----------TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSC
T ss_pred cCcEEEEEEEE-EEEeec----------CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEeccc
Confidence 367888888 443221 12367999999999999988888887642 2346789999999999986432
Q ss_pred -------cEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEEecCC---CceEEEecCCCCceecEEEEeEE
Q 045402 307 -------PIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSST---PIAIKFNCSAKYPCEGIRLYKVN 367 (396)
Q Consensus 307 -------~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~~~~~---~~~~~i~~~~~~~i~~i~~~ni~ 367 (396)
+..|...... | ......+|+||+|+|++..... ..|... -.+.+++|+|.+-.
T Consensus 346 aav~~~~g~~i~g~p~~----~-~~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 346 AAFSAPFGAFIDIGPDN----S-GASNVQDIQRVLVTGNSFYAPANITDSAAIT---LRANLNGCTFIANN 408 (600)
T ss_dssp CTTSSSCEEEEEECCCT----T-CCSSSCCEEEEEEESCEEECCTTCSSEEEEE---ECSCBSCEEEESCE
T ss_pred cccccccceEEEecCcc----c-ccccccceeEEEEeceEEEcCCccCCCccee---eeccccceEEecCc
Confidence 2455442111 1 1224568999999999987633 222222 13467888888866
No 37
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.42 E-value=1.4e-11 Score=120.23 Aligned_cols=248 Identities=18% Similarity=0.147 Sum_probs=164.2
Q ss_pred CCCCeeeEEeecccc-CCCCcccH-HHHHHHHHHHhhcCCCcEEEEcCcEEE--e-----ccccccCcccC----ccEEE
Q 045402 25 AATSSVYNVLRFGAK-GNGVIDST-EAFAKAWAAACASNESTIIYVPKGRYL--L-----GSVAFKGECQS----SDITF 91 (396)
Q Consensus 25 ~~~~~~~~v~d~Ga~-~dg~tddt-~aiq~Ai~~a~~~~~g~~v~~p~G~Y~--~-----~~i~l~~~~~s----~~v~l 91 (396)
.+.++.+.|..-|.. ++|.+-.. -.||+|++.| .+|++|+|.+|+|. + ..+.+.. + ..++|
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a---~pGdtI~l~~GtY~~~~~e~~~~~i~~~~---sGt~~~pIti 84 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV---NPGELILLKPGTYTIPYTQGKGNTITFNK---SGKDGAPIYV 84 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC---CTTCEEEECSEEEECCCBTTBCCCEEECC---CCBTTBCEEE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCccHHHHHhhC---CCCCEEEECCCeEccccccccceeEEecC---CCCCCCCEEE
Confidence 345667888766643 34412222 2799999876 57899999999999 2 3455431 2 02888
Q ss_pred EEcC----EEEeecccc-ccCCCcceEEEeceeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEece
Q 045402 92 QIDG----TLVAPADYR-VLGQADNWLSFEGVSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGL 166 (396)
Q Consensus 92 ~~~G----~l~~~~~~~-~~~~~~~~i~~~~~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v 166 (396)
...+ +|. ...+. .+......|.+ ..++++|+|-+|...+. + .|.+.. ++.+|+++
T Consensus 85 ~~~~g~~~vI~-~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g~----------------~-GI~v~g-s~~~i~n~ 144 (400)
T 1ru4_A 85 AAANCGRAVFD-FSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAGY----------------Q-GAYVIG-SHNTFENT 144 (400)
T ss_dssp EEGGGCCEEEE-CCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCSS----------------C-SEEECS-SSCEEESC
T ss_pred EEecCCCCEEe-CCccCCccccceeEEEE-ECCeEEEEeEEEEeCCC----------------C-cEEEeC-CCcEEEeE
Confidence 8763 444 22111 11100022444 46788888866654432 1 455554 78899999
Q ss_pred EEecCCcceEEEecee-cEEEEeEEEEcCCC----CCCCCceeeec--ceeEEEEccEEec-CCceEEecCCCeeEEEEe
Q 045402 167 LSLNSQMYHIVINRCQ-DVLVEGAKIIAAGD----SPNTDGIHIQQ--SRNVKIRSSSIKT-GDDCISIGRGTNNLWIER 238 (396)
Q Consensus 167 ~i~~~~~~~i~~~~~~-nv~I~~~~i~~~~~----~~~~DGi~~~~--s~nv~I~n~~i~~-~dD~i~~~~~s~ni~i~n 238 (396)
++.+....+|.+.... +.+|+++++....+ ..+.|||.++. .++.+|++|+++. .|||+.+......++|+|
T Consensus 145 ~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~n 224 (400)
T 1ru4_A 145 AFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIEN 224 (400)
T ss_dssp EEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEES
T ss_pred EEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEEe
Confidence 9999887799998654 88999999997543 24679998874 3789999999986 689999976567899999
Q ss_pred eeecC--------------CceEEEEeccccCCCCCEEEEEEEeeEEecC-CeEEEEEeecCCCCceEEeEEEEeEEEec
Q 045402 239 VTCGP--------------GHGISIGSLGKDMDEEGVQNVTVWKTVFTGT-QNGLRIKSWARPSNGFVKGVRFIDAVMQN 303 (396)
Q Consensus 239 ~~~~~--------------~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~-~~gi~i~~~~~~~~g~v~nI~~~ni~~~~ 303 (396)
|..++ +.|+++|.. ....+.+++||...+. .+|+...... ..++++|.++.+
T Consensus 225 n~a~~Ng~~~~~~n~~~gngnGf~lgg~------~~~~~~~v~nn~a~~N~~~G~~~n~~~-------~~~~i~nNt~~~ 291 (400)
T 1ru4_A 225 SWAFRNGINYWNDSAFAGNGNGFKLGGN------QAVGNHRITRSVAFGNVSKGFDQNNNA-------GGVTVINNTSYK 291 (400)
T ss_dssp CEEESTTCCCSCCTTCCCCCCSEECCCT------TCCCCCEEESCEEESCSSEEEECTTCS-------SCCEEESCEEES
T ss_pred EEEECCccccccccccccCCCCEEEecc------CCcCCEEEEeeEEECCcCcCEeecCCC-------CCEEEECeEEEC
Confidence 98742 235777543 2345778999998864 5687664322 137788888877
Q ss_pred CCccEEEE
Q 045402 304 VQNPIIID 311 (396)
Q Consensus 304 ~~~~i~i~ 311 (396)
....+.+.
T Consensus 292 N~~~~~~~ 299 (400)
T 1ru4_A 292 NGINYGFG 299 (400)
T ss_dssp SSEEEEEC
T ss_pred CccceEEe
Confidence 66556554
No 38
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.35 E-value=1.3e-10 Score=113.10 Aligned_cols=199 Identities=11% Similarity=0.116 Sum_probs=112.8
Q ss_pred ceeceEEeceeEe-CCCCcccccccccCCCCCCCceeEEEEeec-ceEEeceEEecCCcceEEEeceecEEEEeEEEEcC
Q 045402 117 GVSGVSIIGGALD-AKGTSLWACKAAAGTTCPNGATTLSITNSN-NVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAA 194 (396)
Q Consensus 117 ~~~nv~I~GG~id-g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~ 194 (396)
++++++|+|-++. ..+ ..+.+..|+ ++++++..+.+...++|.+..|++..|++.++...
T Consensus 132 ~~~nv~I~~~~i~n~~~------------------~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~ 193 (377)
T 2pyg_A 132 ADRDVTIERVEVREMSG------------------YGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYAN 193 (377)
T ss_dssp CEEEEEEEEEEEECCSS------------------CSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESC
T ss_pred cccceEEEeEEEEeccc------------------ceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEcc
Confidence 5789999994443 222 234555443 56677777766667777777777777777765543
Q ss_pred CCCCCCCceeeec-ceeEEEEccEEecCCceEEec-------CCCeeEEEEeeeecC--CceEEEEeccc--------cC
Q 045402 195 GDSPNTDGIHIQQ-SRNVKIRSSSIKTGDDCISIG-------RGTNNLWIERVTCGP--GHGISIGSLGK--------DM 256 (396)
Q Consensus 195 ~~~~~~DGi~~~~-s~nv~I~n~~i~~~dD~i~~~-------~~s~ni~i~n~~~~~--~~gi~igs~~~--------~~ 256 (396)
..|||++.. |++++|+++.+...++|+.+. ..+++++|+++.+++ .+|+.+..... ..
T Consensus 194 ----~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~ 269 (377)
T 2pyg_A 194 ----DRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHG 269 (377)
T ss_dssp ----SSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEES
T ss_pred ----ccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEEC
Confidence 457777665 777777777777766666651 225556666655543 22333211100 00
Q ss_pred C-C-----CCEEEEEEEeeEEecCCe-----EEEEEeecCCCCc---e---EEeEEEEeEEEecCCc-cEEEEeecCCCC
Q 045402 257 D-E-----EGVQNVTVWKTVFTGTQN-----GLRIKSWARPSNG---F---VKGVRFIDAVMQNVQN-PIIIDQNYCPHN 318 (396)
Q Consensus 257 ~-~-----~~i~ni~i~n~~~~~~~~-----gi~i~~~~~~~~g---~---v~nI~~~ni~~~~~~~-~i~i~~~~~~~~ 318 (396)
. . ...++++|+|++|.+... .+.+....+ ..+ . -++++++++++++... +..|... ..
T Consensus 270 ~~~~GI~i~g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~i~~N~i~g~~~~~~~i~~~-~~-- 345 (377)
T 2pyg_A 270 NGSSGVRVYGAQDVQILDNQIHDNAQAAAVPEVLLQSFDD-TAGASGTYYTTLNTRIEGNTISGSANSTYGIQER-ND-- 345 (377)
T ss_dssp CSSCSEEEEEEEEEEEESCEEESCCSSSSCCSEEEECEEE-TTSSSCEEECCBCCEEESCEEECCSSCCEEEEEC-SS--
T ss_pred CCCceEEEecCCCcEEECcEEECCcccccccceEEEEecC-CCccceeeeeccCeEEECCEEECcCCCccceEEc-cC--
Confidence 0 0 125799999999997543 233332211 111 1 3789999999998653 3333321 10
Q ss_pred CCCCCCCcceEEEeEEEEeEEEecCCCceEEEec
Q 045402 319 LNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNC 352 (396)
Q Consensus 319 ~~~~~~~~~~~i~ni~~~ni~~~~~~~~~~~i~~ 352 (396)
..+++++++..+..... ++.+.+
T Consensus 346 ----------~~~~~~i~~n~i~~~~~-~v~~~g 368 (377)
T 2pyg_A 346 ----------GTDYSSLIDNDIAGVQQ-PIQLYG 368 (377)
T ss_dssp ----------SCBCCEEESCEEESSSE-EEECCC
T ss_pred ----------CCccEEEECcEEeCCcc-ceEEEc
Confidence 12456666666655432 555554
No 39
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.33 E-value=1e-10 Score=116.85 Aligned_cols=206 Identities=10% Similarity=0.059 Sum_probs=120.4
Q ss_pred cHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccccccC--cccCccEEEEEc--C--EEEeeccccccCCCcceEEEecee
Q 045402 46 STEAFAKAWAAACASNESTIIYVPKGRYLLGSVAFKG--ECQSSDITFQID--G--TLVAPADYRVLGQADNWLSFEGVS 119 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i~l~~--~~~s~~v~l~~~--G--~l~~~~~~~~~~~~~~~i~~~~~~ 119 (396)
+.+.||+||+.| .+|++|+|++|+|....+.+.+ .-.. .++|..+ + +|.+. ..+.+. .+
T Consensus 30 ~~~~Lq~Ai~~A---~pGDtI~L~~GtY~~~~i~i~~sGt~~~-pItl~~~~~~~~vi~G~----------~~l~i~-g~ 94 (506)
T 1dbg_A 30 SNETLYQVVKEV---KPGGLVQIADGTYKDVQLIVSNSGKSGL-PITIKALNPGKVFFTGD----------AKVELR-GE 94 (506)
T ss_dssp SHHHHHHHHHHC---CTTCEEEECSEEEETCEEEECCCCBTTB-CEEEEESSTTSEEEEES----------CEEEEC-SS
T ss_pred CHHHHHHHHHhC---CCCCEEEECCCEEecceEEEecCCcCCC-CEEEECCCCCccEEeCC----------ceEEEE-cC
Confidence 567899999876 6799999999999854555521 0002 5777775 2 23321 124443 47
Q ss_pred ceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcc-eEEEe--------ceecEEEEeEE
Q 045402 120 GVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMY-HIVIN--------RCQDVLVEGAK 190 (396)
Q Consensus 120 nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~-~i~~~--------~~~nv~I~~~~ 190 (396)
+++|+|-+|.+.+........ ..+..+.+. .++++|+++.|.+...- .+.+. ..++.+|++++
T Consensus 95 ~v~i~GL~i~~~~~~~~~~~~-------~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~ 166 (506)
T 1dbg_A 95 HLILEGIWFKDGNRAIQAWKS-------HGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCS 166 (506)
T ss_dssp SEEEESCEEEEECCCTTTCCT-------TSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCE
T ss_pred CEEEECeEEECCCcceeeeec-------ccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcE
Confidence 788888665543321110000 012233333 58889999999876331 02232 55677899999
Q ss_pred EEcCCCCCCCC----ceeeec-------ceeEEEEccEEec------CCceEEecC---CCeeEEEEeeeecCCc-eEEE
Q 045402 191 IIAAGDSPNTD----GIHIQQ-------SRNVKIRSSSIKT------GDDCISIGR---GTNNLWIERVTCGPGH-GISI 249 (396)
Q Consensus 191 i~~~~~~~~~D----Gi~~~~-------s~nv~I~n~~i~~------~dD~i~~~~---~s~ni~i~n~~~~~~~-gi~i 249 (396)
|.+..+..... ||+++. +.+.+|+|+.|.. +.+++.++. .+++.+|+++.+..++ |..+
T Consensus 167 I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~ai 246 (506)
T 1dbg_A 167 FTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEI 246 (506)
T ss_dssp EECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEE
T ss_pred EECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEE
Confidence 99854333333 777775 3689999999985 334566653 2468888888877544 2222
Q ss_pred EeccccCCCCCEEEEEEEeeEEecCCeEEEEE
Q 045402 250 GSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIK 281 (396)
Q Consensus 250 gs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~ 281 (396)
=+.. ..+.+|+++++.++..+|.+.
T Consensus 247 m~sk-------S~~n~i~~N~~~~~~ggi~l~ 271 (506)
T 1dbg_A 247 ITSK-------SQENVYYGNTYLNCQGTMNFR 271 (506)
T ss_dssp EEEE-------SBSCEEESCEEESCSSEEEEE
T ss_pred EEEe-------cCCEEEECCEEEcccCcEEEe
Confidence 1110 002356666666655555444
No 40
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.27 E-value=3.7e-11 Score=122.79 Aligned_cols=95 Identities=18% Similarity=0.291 Sum_probs=71.7
Q ss_pred CeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEec-cccccCcccCccEEEEEcC--EEEeecc-c
Q 045402 28 SSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLLG-SVAFKGECQSSDITFQIDG--TLVAPAD-Y 103 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~-~i~l~~~~~s~~v~l~~~G--~l~~~~~-~ 103 (396)
...++|+||||+|||++|||+|||+||+++ .++.+||||+|+|++. +|.++ + +++|.+++ +|..... .
T Consensus 398 ~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa---~~g~~v~~P~G~Y~vt~Ti~ip----~-~~~ivG~~~~~I~~~G~~F 469 (758)
T 3eqn_A 398 SDFVSVRSQGAKGDGHTDDTQAIKNVFAKY---AGCKIIFFDAGTYIVTDTIQIP----A-GTQIVGEVWSVIMGTGSKF 469 (758)
T ss_dssp GGEEETTTTTCCCEEEEECHHHHHHHHHHH---TTTSEEECCSEEEEESSCEEEC----T-TCEEECCSSEEEEECSGGG
T ss_pred cceEEeeeccccCCCCchhHHHHHHHHHHh---cCCCEEEECCCEeEECCeEEcC----C-CCEEEecccceEecCCccc
Confidence 458999999999999999999999999855 5688999999999876 58888 6 89999997 6665431 1
Q ss_pred cccCCCcceEEE---eceeceEEeceeEeC
Q 045402 104 RVLGQADNWLSF---EGVSGVSIIGGALDA 130 (396)
Q Consensus 104 ~~~~~~~~~i~~---~~~~nv~I~GG~idg 130 (396)
.+-....+++.+ .+.-.|+|.|-.++-
T Consensus 470 ~d~~~P~pvv~VG~~gd~G~veisdl~~~t 499 (758)
T 3eqn_A 470 TDYNNPQPVIQVGAPGSSGVVEITDMIFTT 499 (758)
T ss_dssp CCTTSCEEEEEESCTTCBSCEEEESCEEEE
T ss_pred cCCCCCeeeEEeCCCCCCCeEEEEeEEEEe
Confidence 222223456666 334578888855553
No 41
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.85 E-value=8.9e-08 Score=91.47 Aligned_cols=76 Identities=25% Similarity=0.326 Sum_probs=54.8
Q ss_pred CCCceeeecceeEEEEccEEecC------------------CceEEecCCCeeEEEEeeeecCCc-eEEEEeccccC-CC
Q 045402 199 NTDGIHIQQSRNVKIRSSSIKTG------------------DDCISIGRGTNNLWIERVTCGPGH-GISIGSLGKDM-DE 258 (396)
Q Consensus 199 ~~DGi~~~~s~nv~I~n~~i~~~------------------dD~i~~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~-~~ 258 (396)
..|+|.+..++||+|++|.|..+ |..+.+..++.+|+|+||+|...+ ++-+|+..... ..
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d 211 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQD 211 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccc
Confidence 46889998889999999999863 445667767899999999998644 56676642111 11
Q ss_pred CCEEEEEEEeeEEecC
Q 045402 259 EGVQNVTVWKTVFTGT 274 (396)
Q Consensus 259 ~~i~ni~i~n~~~~~~ 274 (396)
....+|+|.++.|.+.
T Consensus 212 ~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 212 SGKLRVTFHNNVFDRV 227 (355)
T ss_pred cCcceEEEECcEEeCC
Confidence 1345899999999874
No 42
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.83 E-value=1.4e-07 Score=90.00 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=70.5
Q ss_pred eEEEEeecceEEeceEEecCC-cceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceE-EecC
Q 045402 152 TLSITNSNNVSIKGLLSLNSQ-MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCI-SIGR 229 (396)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~~~~-~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i-~~~~ 229 (396)
.|.+..++||.|++++|.++. .+.-++...+. .+.--+ .....|||.+..+++|+|++|.+..+.|++ .++.
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~---~~~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSES---IGVEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETT---TEEEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccC---cccccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 355667788888888887652 11000000000 000000 123678999998899999999998876665 5755
Q ss_pred CCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEE-ecC
Q 045402 230 GTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVF-TGT 274 (396)
Q Consensus 230 ~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~-~~~ 274 (396)
++.+|+|+||.|...+ ++.+|+..... .....+|++.++.+ .+.
T Consensus 181 ~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 181 GSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp SCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSE
T ss_pred CcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCc
Confidence 6889999999987643 56676542111 11235888888888 553
No 43
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.77 E-value=5.3e-07 Score=85.23 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=44.4
Q ss_pred CCCceeeecceeEEEEccEEecC-CceEEecCCCeeEEEEeeeecCCc-eEEEEeccccC--CCCCEEEEEEEeeEEec
Q 045402 199 NTDGIHIQQSRNVKIRSSSIKTG-DDCISIGRGTNNLWIERVTCGPGH-GISIGSLGKDM--DEEGVQNVTVWKTVFTG 273 (396)
Q Consensus 199 ~~DGi~~~~s~nv~I~n~~i~~~-dD~i~~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~--~~~~i~ni~i~n~~~~~ 273 (396)
..|+|.+..++||+|++|.+..+ |..+.+..++.+|+|+||.|...+ ++-+|+.-... ....-.+|+|.++.+.+
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~ 193 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKN 193 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEES
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecC
Confidence 56777777777777777777764 444666656777777777776543 45555421000 00012366777666665
No 44
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.71 E-value=2.7e-07 Score=88.28 Aligned_cols=67 Identities=10% Similarity=0.141 Sum_probs=43.0
Q ss_pred EEEe-ceecEEEEeEEEEcCC--CCCCCCceeeecceeEEEEccEEec-CCceEEe-cCCCeeEEEEeeeec
Q 045402 176 IVIN-RCQDVLVEGAKIIAAG--DSPNTDGIHIQQSRNVKIRSSSIKT-GDDCISI-GRGTNNLWIERVTCG 242 (396)
Q Consensus 176 i~~~-~~~nv~I~~~~i~~~~--~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~~-~~~s~ni~i~n~~~~ 242 (396)
|.+. .++||.|+|++|+... .....|+|.+..++||+|++|.+.. +|..+.. ..++.+|+|+||.|.
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~ 197 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYID 197 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEE
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEec
Confidence 4444 4566666666666421 1124578888878888888888875 4555544 335778888888885
No 45
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.69 E-value=1.4e-06 Score=81.96 Aligned_cols=139 Identities=12% Similarity=0.194 Sum_probs=87.2
Q ss_pred EEEeceecEEEEeEEEEcCCCCCCCCceeeec-ceeEEEEccEEec----------CCceEEecCCCeeEEEEeeeecCC
Q 045402 176 IVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQ-SRNVKIRSSSIKT----------GDDCISIGRGTNNLWIERVTCGPG 244 (396)
Q Consensus 176 i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~----------~dD~i~~~~~s~ni~i~n~~~~~~ 244 (396)
+.+..++||.|+|++|+... ....|+|.+.. ++||+|++|.+.. .|..+.++.++.+|+|+||.|...
T Consensus 97 l~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp EEEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 33445556666666666532 23578999986 8999999999962 255678888899999999999864
Q ss_pred c-eEEEEeccccCCCCCEEEEEEEeeEEecCC-eEEEEEeecCCCCceEEeEEEEeEEEecCC-ccEEEEeecCCCCCCC
Q 045402 245 H-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQ-NGLRIKSWARPSNGFVKGVRFIDAVMQNVQ-NPIIIDQNYCPHNLNC 321 (396)
Q Consensus 245 ~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~ 321 (396)
+ ++-+|+.-... ..-.+|+|.++.+.+.. +.=+++ .| .+.+-|..+++.. +++....
T Consensus 176 ~k~~LiG~sd~~~--~~~~~vT~~~N~f~~~~~R~Pr~r------~G---~~Hv~NN~~~n~~~~~~~~~~--------- 235 (326)
T 3vmv_A 176 WKTMLVGHTDNAS--LAPDKITYHHNYFNNLNSRVPLIR------YA---DVHMFNNYFKDINDTAINSRV--------- 235 (326)
T ss_dssp EECEEECSSSCGG--GCCEEEEEESCEEEEEEECTTEEE------SC---EEEEESCEEEEESSCSEEEET---------
T ss_pred ceEEEECCCCCCc--ccCccEEEEeeEecCCcCcCCccc------CC---cEEEEccEEECCCceEEeecC---------
Confidence 3 57776541110 11258999999987631 111332 01 2455555555543 4544432
Q ss_pred CCCCcceEEEeEEEEeE
Q 045402 322 PGQVSGVKISDIIYWNI 338 (396)
Q Consensus 322 ~~~~~~~~i~ni~~~ni 338 (396)
...+.+|+-.|++.
T Consensus 236 ---~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 236 ---GARVFVENNYFDNV 249 (326)
T ss_dssp ---TCEEEEESCEEEEE
T ss_pred ---CcEEEEEceEEECC
Confidence 13467888888887
No 46
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.69 E-value=9.2e-07 Score=83.83 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=15.3
Q ss_pred cHHHHHHHHHHHhhcCCCcEEEEcCcEEEe
Q 045402 46 STEAFAKAWAAACASNESTIIYVPKGRYLL 75 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~ 75 (396)
+.+.|++||+.. +..+..+|+| .|++.+
T Consensus 22 t~~~L~~al~~~-~~~~p~iI~~-~G~i~~ 49 (330)
T 2qy1_A 22 TFEAMQSAIDSY-SGSGGLVLNY-TGKFDF 49 (330)
T ss_dssp SHHHHHHHHHHS-CSSSCEEEEE-CCBCCG
T ss_pred CHHHHHHHHhcc-CCCCCEEEEE-ccEEec
Confidence 445788888652 2223344544 566544
No 47
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.68 E-value=8.8e-07 Score=84.75 Aligned_cols=206 Identities=17% Similarity=0.301 Sum_probs=113.7
Q ss_pred cHHHHHHHHHHHhhcCCCc---EEEEcCcEEEeccccccCcccCccEEEEEcC---EEEeeccccccCCCcceEEEecee
Q 045402 46 STEAFAKAWAAACASNEST---IIYVPKGRYLLGSVAFKGECQSSDITFQIDG---TLVAPADYRVLGQADNWLSFEGVS 119 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~~~g~---~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~~ 119 (396)
+-..||+||+++ +.+. +|+|++|+|... +.+. |+ +++|.++| ++.-..+..
T Consensus 43 ~f~TIq~Ai~aa---~~~~~~~~I~I~~G~Y~E~-v~I~---k~-~itl~G~g~~~TiIt~~~~~--------------- 99 (364)
T 3uw0_A 43 EFSSINAALKSA---PKDDTPFIIFLKNGVYTER-LEVA---RS-HVTLKGENRDGTVIGANTAA--------------- 99 (364)
T ss_dssp -CCCHHHHHHHS---CSSSSCEEEEECSEEECCC-EEEC---ST-TEEEEESCTTTEEEEECCCT---------------
T ss_pred CcccHHHHHhhc---ccCCCcEEEEEeCCEEEEE-EEEc---CC-eEEEEecCCCCeEEEccccc---------------
Confidence 456699999876 3343 999999999753 4554 24 79998886 222111100
Q ss_pred ceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCc--------------------ceEEEe
Q 045402 120 GVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQM--------------------YHIVIN 179 (396)
Q Consensus 120 nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~--------------------~~i~~~ 179 (396)
+....+|.. |. ..+...+. ...++++++|++|.|... -++.+.
T Consensus 100 ------~~~~~~g~~-~g---------t~~saTv~-V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~ 162 (364)
T 3uw0_A 100 ------GMLNPQGEK-WG---------TSGSSTVL-VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLA 162 (364)
T ss_dssp ------TSBCTTCSB-CC---------TTTCCSEE-ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEEC
T ss_pred ------ccccccccc-cc---------ccCeeEEE-EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEe
Confidence 011111110 00 00111233 357889999999987631 245554
Q ss_pred -ceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecC-------C-ce-EEE
Q 045402 180 -RCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGP-------G-HG-ISI 249 (396)
Q Consensus 180 -~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~-------~-~g-i~i 249 (396)
.++...+.+|++.. ..|.+..+...+..+++|.|...-|-| ++. ....++||++.. . .| |.-
T Consensus 163 ~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~~c~I~GtvDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~g~ITA 234 (364)
T 3uw0_A 163 ENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFSDCEISGHVDFI-FGS--GITVFDNCNIVARDRSDIEPPYGYITA 234 (364)
T ss_dssp TTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEESCEEEESEEEE-EES--SEEEEESCEEEECCCSSCSSCCEEEEE
T ss_pred cCCCeEEEEeeEEEe-----cccceEeCCCCCEEEEcCEEEcCCCEE-CCc--ceEEEEeeEEEEeccCcccCCccEEEe
Confidence 57888888888887 446676664567888888888655533 222 357788887742 1 13 222
Q ss_pred EeccccCCCCCEEEEEEEeeEEecCCe----EEEEE-eecCCC----Cc-e-----EEeEEEEeEEEecC
Q 045402 250 GSLGKDMDEEGVQNVTVWKTVFTGTQN----GLRIK-SWARPS----NG-F-----VKGVRFIDAVMQNV 304 (396)
Q Consensus 250 gs~~~~~~~~~i~ni~i~n~~~~~~~~----gi~i~-~~~~~~----~g-~-----v~nI~~~ni~~~~~ 304 (396)
-+ . +...-..+.|.||++..... ..++. +| ++. .| + +..+.|.+..|.+.
T Consensus 235 ~~--~--~~~~~~G~vf~~c~i~~~~~~~~~~~yLGRPW-~~~s~~~~g~yadp~a~~rvVf~~s~m~~~ 299 (364)
T 3uw0_A 235 PS--T--LTTSPYGLIFINSRLTKEPGVPANSFALGRPW-HPTTTFADGRYADPAAIGQSVFINTTMDDH 299 (364)
T ss_dssp EC--C--CTTCSCCEEEESCEEEECTTCCSSCEEEECCC-CCEEECSSCEEECTTCCCEEEEESCEECTT
T ss_pred CC--c--CCCCCcEEEEEeeEEecCCCCccccEEecccc-ccccccccccccccCccceEEEEeCCCCce
Confidence 11 1 11222357788888875321 22333 22 211 01 1 24688888888764
No 48
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.65 E-value=4.7e-06 Score=78.42 Aligned_cols=200 Identities=16% Similarity=0.177 Sum_probs=122.7
Q ss_pred cHHHHHHHHHHHhhcCCCc----EEEEcCcEEEeccccccCcccCccEEEEEcCEEEeeccccccCCCcceEEEeceece
Q 045402 46 STEAFAKAWAAACASNEST----IIYVPKGRYLLGSVAFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSGV 121 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~~~g~----~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv 121 (396)
+-..||+||+++ +.+. +|+|++|+|.. .+.++.. |. +++|.++|. +..
T Consensus 18 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~E-~V~I~~~-k~-~Itl~G~g~----------------------~~t 69 (319)
T 1gq8_A 18 DYKTVSEAVAAA---PEDSKTRYVIRIKAGVYRE-NVDVPKK-KK-NIMFLGDGR----------------------TST 69 (319)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEEC-CEEECTT-CC-SEEEEESCT----------------------TTE
T ss_pred CccCHHHHHHhc---cccCCceEEEEEcCCeEee-eeeccCC-Cc-cEEEEEcCC----------------------Ccc
Confidence 445599999876 3454 99999999975 4555421 13 788888751 112
Q ss_pred EEec-eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCC------cceEEEeceecEEEEeEEEEcC
Q 045402 122 SIIG-GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQ------MYHIVINRCQDVLVEGAKIIAA 194 (396)
Q Consensus 122 ~I~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~------~~~i~~~~~~nv~I~~~~i~~~ 194 (396)
.|.| +.. ..| +.. .+...+.+ ..++++++|++|.|.. .-++.+ .++++.+.+|++..
T Consensus 70 iI~~~~~~-~~g---~~t---------~~satv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g- 133 (319)
T 1gq8_A 70 IITASKNV-QDG---STT---------FNSATVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA- 133 (319)
T ss_dssp EEEECCCT-TTT---CCT---------GGGCSEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-
T ss_pred EEEecccc-cCC---CCc---------cceEEEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-
Confidence 2222 000 000 000 01123333 4789999999999853 234655 58889999999997
Q ss_pred CCCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCC------ce-EEEEeccccCCCCCEEEEEEE
Q 045402 195 GDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPG------HG-ISIGSLGKDMDEEGVQNVTVW 267 (396)
Q Consensus 195 ~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~------~g-i~igs~~~~~~~~~i~ni~i~ 267 (396)
..|++..+..+ ..+++|.|...-|-|- +. ....++||.+..- .+ +.- .+.. +......+.|.
T Consensus 134 ----~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G~--~~a~f~~c~i~~~~~~~~~~~~itA--~~r~-~~~~~~G~vf~ 202 (319)
T 1gq8_A 134 ----YQDSLYVHSNR-QFFINCFIAGTVDFIF-GN--AAVVLQDCDIHARRPGSGQKNMVTA--QGRT-DPNQNTGIVIQ 202 (319)
T ss_dssp ----STTCEEECSSE-EEEESCEEEESSSCEE-ES--CEEEEESCEEEECCCSTTCCEEEEE--ECCC-STTCCCEEEEE
T ss_pred ----cceeeeecCcc-EEEEecEEEeeeeEEe-cC--CcEEEEeeEEEEecCCCCCceEEEe--CCCC-CCCCCceEEEE
Confidence 45778887655 4999999998766554 22 3588999988631 23 222 1211 22345678999
Q ss_pred eeEEecCCe--------EEEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 268 KTVFTGTQN--------GLRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 268 n~~~~~~~~--------gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
||++..... ..++.=.++ ....+.|.+..|.+.
T Consensus 203 ~c~i~~~~~~~~~~~~~~~yLGRpW~----~~sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 203 KSRIGATSDLQPVQSSFPTYLGRPWK----EYSRTVVMQSSITNV 243 (319)
T ss_dssp SCEEEECTTTGGGGGGSCEEEECCSS----TTCEEEEESCEECTT
T ss_pred CCEEecCCCccccccceeEEecccCC----CcceEEEEeccCCCc
Confidence 999986431 244441112 234688999999875
No 49
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.65 E-value=3.2e-06 Score=79.51 Aligned_cols=200 Identities=15% Similarity=0.197 Sum_probs=121.4
Q ss_pred cHHHHHHHHHHHhhcCCCc----EEEEcCcEEEeccccccCcccCccEEEEEcCEEEeeccccccCCCcceEEEeceece
Q 045402 46 STEAFAKAWAAACASNEST----IIYVPKGRYLLGSVAFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSGV 121 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~~~g~----~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~nv 121 (396)
|-..||+||+++ +.+. +|+|++|+|.. .+.++.. |. +++|.++|. +..
T Consensus 14 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~E-~V~I~~~-k~-~Itl~G~g~----------------------~~t 65 (317)
T 1xg2_A 14 DYQTLAEAVAAA---PDKSKTRYVIYVKRGTYKE-NVEVASN-KM-NLMIVGDGM----------------------YAT 65 (317)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEEC-CEEECTT-SC-SEEEEESCT----------------------TTE
T ss_pred CcccHHHHHhhc---ccCCCceEEEEEcCCEEee-eeecCCC-CC-cEEEEEcCC----------------------CCc
Confidence 444599999876 3454 99999999974 3555321 13 788888761 112
Q ss_pred EEec-eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCC------cceEEEeceecEEEEeEEEEcC
Q 045402 122 SIIG-GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQ------MYHIVINRCQDVLVEGAKIIAA 194 (396)
Q Consensus 122 ~I~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~------~~~i~~~~~~nv~I~~~~i~~~ 194 (396)
.|.| ... ..| +.. .+...+.+ ..++++++|++|.|.. .-++.+ .++++.++||++..
T Consensus 66 iI~~~~~~-~~g---~~t---------~~satv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g- 129 (317)
T 1xg2_A 66 TITGSLNV-VDG---STT---------FRSATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA- 129 (317)
T ss_dssp EEEECCCT-TTT---CCS---------GGGCSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-
T ss_pred EEEecccc-cCC---Ccc---------cceeEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-
Confidence 2222 000 000 000 01123343 5889999999998863 234555 57889999999997
Q ss_pred CCCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecC-----C-ce-EEEEeccccCCCCCEEEEEEE
Q 045402 195 GDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGP-----G-HG-ISIGSLGKDMDEEGVQNVTVW 267 (396)
Q Consensus 195 ~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~-----~-~g-i~igs~~~~~~~~~i~ni~i~ 267 (396)
..|++..+..++ .+++|.|...-|-|- +. ....++||.+.. + .+ +.- .+. .+......+.|.
T Consensus 130 ----~QDTLy~~~~r~-~~~~c~I~G~vDFIf-G~--~~avf~~c~i~~~~~~~~~~~~itA--~~r-~~~~~~~G~vf~ 198 (317)
T 1xg2_A 130 ----YQDTLYAHSQRQ-FYRDSYVTGTVDFIF-GN--AAVVFQKCQLVARKPGKYQQNMVTA--QGR-TDPNQATGTSIQ 198 (317)
T ss_dssp ----STTCEEECSSEE-EEESCEEEESSSCEE-EC--CEEEEESCEEEECCCSTTCCEEEEE--ECC-CCTTSCCEEEEE
T ss_pred ----cccceeecCccE-EEEeeEEEeceeEEc-CC--ceEEEeeeEEEEeccCCCCccEEEe--cCc-CCCCCCcEEEEE
Confidence 457777776554 889999998666443 32 358899998753 1 23 222 111 122345678899
Q ss_pred eeEEecCCe--------EEEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 268 KTVFTGTQN--------GLRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 268 n~~~~~~~~--------gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
||++..... ..++.=.++ ....+.|.+.+|.+.
T Consensus 199 ~c~i~~~~~~~~~~~~~~~yLGRpW~----~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 199 FCNIIASSDLEPVLKEFPTYLGRPWK----EYSRTVVMESYLGGL 239 (317)
T ss_dssp SCEEEECTTTGGGTTTSCEEEECCSS----TTCEEEEESCEECTT
T ss_pred CCEEecCCCccccccceeEEeecccC----CCceEEEEecccCCc
Confidence 999986431 244441112 234688999999865
No 50
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.62 E-value=1.4e-06 Score=83.39 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=33.7
Q ss_pred ceecEEEEeEEEEcCCC--CCCCCceeeecceeEEEEccEEec-CCceEE-ecCCCeeEEEEeeeec
Q 045402 180 RCQDVLVEGAKIIAAGD--SPNTDGIHIQQSRNVKIRSSSIKT-GDDCIS-IGRGTNNLWIERVTCG 242 (396)
Q Consensus 180 ~~~nv~I~~~~i~~~~~--~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~-~~~~s~ni~i~n~~~~ 242 (396)
.++||.|+|++|+.... ....|+|.+..+++|+|++|.+.. +|..+. ...++.+|+|+||.|.
T Consensus 131 ~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 131 GAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp TCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEE
T ss_pred CCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEec
Confidence 34444444444443211 123466777666777777777765 333332 2334667777777765
No 51
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.60 E-value=8.4e-07 Score=84.80 Aligned_cols=76 Identities=24% Similarity=0.397 Sum_probs=56.0
Q ss_pred CCCceeeec-ceeEEEEccEEecC------------------CceEEecCCCeeEEEEeeeecCCc-eEEEEeccccC-C
Q 045402 199 NTDGIHIQQ-SRNVKIRSSSIKTG------------------DDCISIGRGTNNLWIERVTCGPGH-GISIGSLGKDM-D 257 (396)
Q Consensus 199 ~~DGi~~~~-s~nv~I~n~~i~~~------------------dD~i~~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~-~ 257 (396)
..|+|.+.. ++||+|++|.|..+ |..+.++.++.+|+|+||.|.... ++-+|+...+. .
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~ 221 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQ 221 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHH
T ss_pred CCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCccc
Confidence 468999998 99999999999863 666888878999999999997633 56666531100 0
Q ss_pred CCCEEEEEEEeeEEecC
Q 045402 258 EEGVQNVTVWKTVFTGT 274 (396)
Q Consensus 258 ~~~i~ni~i~n~~~~~~ 274 (396)
...-..|+|.++.+.+.
T Consensus 222 d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 222 DKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp HTTCCEEEEESCEEEEE
T ss_pred ccCcceEEEECeEEcCc
Confidence 01234899999999764
No 52
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.58 E-value=9.2e-07 Score=84.30 Aligned_cols=114 Identities=13% Similarity=0.178 Sum_probs=62.8
Q ss_pred ceEEEeceecEEEEeEEEEcCCCCCCCCce-eeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCC-ceE-EEE
Q 045402 174 YHIVINRCQDVLVEGAKIIAAGDSPNTDGI-HIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPG-HGI-SIG 250 (396)
Q Consensus 174 ~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi-~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~-~gi-~ig 250 (396)
.++.+..++||.|+|++|+......++| | .-.. .+. ...-...+|+|.+.. ++||.|++|++..+ +|+ .+.
T Consensus 106 ~gi~i~~a~NVIIrnl~i~~~~~~~~~~-I~~~~~-~~~---g~~~~~~~DaI~i~~-s~nVwIDHcs~s~~~Dg~id~~ 179 (346)
T 1pxz_A 106 PCLFMRKVSHVILHSLHIHGCNTSVLGD-VLVSES-IGV---EPVHAQDGDAITMRN-VTNAWIDHNSLSDCSDGLIDVT 179 (346)
T ss_dssp CCEEEESCEEEEEESCEEECCCCCCSEE-EEEETT-TEE---EEECCCCCCSEEEES-CEEEEEESCEEECCSSEEEEEE
T ss_pred ceEEEEccCCEEEEeeEEEeeccCCCce-EEeccC-ccc---ccccCCCCCEEEEec-CceEEEEeeEEecCCCCcEeec
Confidence 5677777888888888887632100000 0 0000 000 000113567888875 78888888888765 453 331
Q ss_pred eccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEE
Q 045402 251 SLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVM 301 (396)
Q Consensus 251 s~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~ 301 (396)
...++|+|+||.|.+...++.+............+|+|.+..+
T Consensus 180 --------~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 180 --------LGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQF 222 (346)
T ss_dssp --------SSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEE
T ss_pred --------cCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEE
Confidence 2356888888888876666666432110001123566666666
No 53
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.55 E-value=4.1e-06 Score=79.20 Aligned_cols=152 Identities=11% Similarity=0.117 Sum_probs=108.3
Q ss_pred ceEEec-eeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecC-----------CcceEEEeceecEEEE
Q 045402 120 GVSIIG-GALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNS-----------QMYHIVINRCQDVLVE 187 (396)
Q Consensus 120 nv~I~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~-----------~~~~i~~~~~~nv~I~ 187 (396)
.+.|.. -+|.|++.. .. ....|.+.+++||.|++++|.+. ..++|.+..++||.|+
T Consensus 63 ~l~v~snkTI~G~ga~----~I--------~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWID 130 (340)
T 3zsc_A 63 EIKVLSDKTIVGINDA----KI--------VGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWID 130 (340)
T ss_dssp EEEECSSEEEEEEEEE----EE--------EEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEE
T ss_pred eEEecCCCEEEeccCc----EE--------ecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEE
Confidence 466644 677777653 00 12368888999999999999974 3568999999999999
Q ss_pred eEEEEcCCCCCCCCc-eeee-cceeEEEEccEEecCCceEEecCCC----------eeEEEEeeeecCCce--EEEEecc
Q 045402 188 GAKIIAAGDSPNTDG-IHIQ-QSRNVKIRSSSIKTGDDCISIGRGT----------NNLWIERVTCGPGHG--ISIGSLG 253 (396)
Q Consensus 188 ~~~i~~~~~~~~~DG-i~~~-~s~nv~I~n~~i~~~dD~i~~~~~s----------~ni~i~n~~~~~~~g--i~igs~~ 253 (396)
+|++... .|| +++. .+.+|+|++|.|...+-+.-+++.. .+|++.++.+.+... -++..
T Consensus 131 Hcs~s~~-----~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~-- 203 (340)
T 3zsc_A 131 HITFVNG-----NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF-- 203 (340)
T ss_dssp SCEEESC-----SSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEES--
T ss_pred eeeeccC-----CccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccC--
Confidence 9999974 455 6776 5899999999999876665555421 379999999865321 22211
Q ss_pred ccCCCCCEEEEEEEeeEEec----------C-CeEEEEEeecCCCCceEEeEEEEeEEEecCCc
Q 045402 254 KDMDEEGVQNVTVWKTVFTG----------T-QNGLRIKSWARPSNGFVKGVRFIDAVMQNVQN 306 (396)
Q Consensus 254 ~~~~~~~i~ni~i~n~~~~~----------~-~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~ 306 (396)
+ .+++-|+.+++ . .+++.. ..+ ..|.+|+..++++..
T Consensus 204 -----G---~~Hv~NN~~~n~~~~~~~~~~~~~yai~~--~~~------a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 204 -----G---MAHVFNNFYSMGLRTGVSGNVFPIYGVAS--AMG------AKVHVEGNYFMGYGA 251 (340)
T ss_dssp -----S---EEEEESCEEECCCCCSCSSCCSCCEEEEE--ETT------CEEEEESCEEECSCH
T ss_pred -----C---eEEEEccEEECCccccccccceeeeeEec--CCC------CEEEEECcEEECCCc
Confidence 1 57899999998 2 224333 222 368899999988876
No 54
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.50 E-value=6e-07 Score=85.67 Aligned_cols=95 Identities=19% Similarity=0.224 Sum_probs=51.3
Q ss_pred eEEEeceecEEEEeEEEEcCCC-CCCCCceeeecceeEEEEccEEecC--------------CceEEecCCCeeEEEEee
Q 045402 175 HIVINRCQDVLVEGAKIIAAGD-SPNTDGIHIQQSRNVKIRSSSIKTG--------------DDCISIGRGTNNLWIERV 239 (396)
Q Consensus 175 ~i~~~~~~nv~I~~~~i~~~~~-~~~~DGi~~~~s~nv~I~n~~i~~~--------------dD~i~~~~~s~ni~i~n~ 239 (396)
+|.+..++||.|+|++|+..+. ....|+|.+..++||+|++|.|..+ |..+.++.++.+|+|+||
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 3444445555555555553211 1245667776667777777777532 334555555677777777
Q ss_pred eecCCc-eEEEEeccccCCCCCEEEEEEEeeEEec
Q 045402 240 TCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTG 273 (396)
Q Consensus 240 ~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~ 273 (396)
.|.+.+ +.-+|+... ... .+|+|.++.+.+
T Consensus 184 ~f~~h~k~~LiG~sd~---~~g-~~vT~hhN~f~~ 214 (353)
T 1air_A 184 YIHGVKKVGLDGSSSS---DTG-RNITYHHNYYND 214 (353)
T ss_dssp EEEEEEECCEESSSTT---CCC-CEEEEESCEEEE
T ss_pred EEcCCCceeEECCCcC---CCC-ceEEEEceEEcC
Confidence 776433 233444311 111 467777776655
No 55
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.46 E-value=3.7e-06 Score=79.67 Aligned_cols=143 Identities=14% Similarity=0.166 Sum_probs=90.5
Q ss_pred ceEEEe-ceecEEEEeEEEEcCCCCCCCCceeee-----cceeEEEEccEEecC------------CceEEecCCCeeEE
Q 045402 174 YHIVIN-RCQDVLVEGAKIIAAGDSPNTDGIHIQ-----QSRNVKIRSSSIKTG------------DDCISIGRGTNNLW 235 (396)
Q Consensus 174 ~~i~~~-~~~nv~I~~~~i~~~~~~~~~DGi~~~-----~s~nv~I~n~~i~~~------------dD~i~~~~~s~ni~ 235 (396)
.++.+. .++||.|+|++|+........|+|.+. .++||+|++|.+..+ |..+.++.++.+|+
T Consensus 86 ~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VT 165 (330)
T 2qy1_A 86 FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVT 165 (330)
T ss_dssp SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEE
T ss_pred eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEE
Confidence 467777 788888888888864322357899998 589999999999632 45577777789999
Q ss_pred EEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecCC-eEEEEEeecCCCCceEEeEEEEeEEEecC-CccEEEEe
Q 045402 236 IERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGTQ-NGLRIKSWARPSNGFVKGVRFIDAVMQNV-QNPIIIDQ 312 (396)
Q Consensus 236 i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~~-~gi~i~~~~~~~~g~v~nI~~~ni~~~~~-~~~i~i~~ 312 (396)
|+||.|...+ ++-+|+..... .....+|+|.++.+.+.. +.=+++ .| .+.+-|..+++. .+++....
T Consensus 166 ISnn~f~~h~k~~L~G~sd~~~-~~~~~~vT~h~N~f~~~~~R~Pr~r------~G---~~hv~NN~~~n~~~~~i~~~~ 235 (330)
T 2qy1_A 166 VSYNYVYNYQKVALNGYSDSDT-KNSAARTTYHHNRFENVESRVPLQR------FG---LSHIYNNYFNNVTTSGINVRM 235 (330)
T ss_dssp EESCEEEEEEECCEESSSTTCG-GGGGCEEEEESCEEEEEEECTTEEE------SS---EEEEESCEEEEECSCSEEEET
T ss_pred EEcceeccCCeEEEECCCCccc-cCCCceEEEECcEEcCCCCCCCcee------cc---eEEEEeeEEEcccceEeccCC
Confidence 9999997543 45566531111 111258999999987642 111232 11 244555555543 24444322
Q ss_pred ecCCCCCCCCCCCcceEEEeEEEEeE
Q 045402 313 NYCPHNLNCPGQVSGVKISDIIYWNI 338 (396)
Q Consensus 313 ~~~~~~~~~~~~~~~~~i~ni~~~ni 338 (396)
...+.+|+-.|++.
T Consensus 236 ------------~~~i~~e~N~F~~~ 249 (330)
T 2qy1_A 236 ------------GGIAKIESNYFENI 249 (330)
T ss_dssp ------------TCEEEEESCEEEEE
T ss_pred ------------CcEEEEEccEEECC
Confidence 12456777778776
No 56
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.42 E-value=8.6e-05 Score=67.41 Aligned_cols=183 Identities=15% Similarity=0.215 Sum_probs=121.4
Q ss_pred CeeeEEeeccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCcEEEeccccccCcccCccEEEEEcC--EEEeeccccc
Q 045402 28 SSVYNVLRFGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKGRYLLGSVAFKGECQSSDITFQIDG--TLVAPADYRV 105 (396)
Q Consensus 28 ~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G--~l~~~~~~~~ 105 (396)
++++..++|||.+|-.+||+++|.+.|... ..|++|.|+|....+.+. ..-|++.| +|+--+..
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s~------~~v~i~~gvf~ss~i~~~------~c~l~g~g~g~~~~~~~~-- 127 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNSQ------KAVTISDGVFSSSGINSN------YCNLDGRGSGVLSHRSST-- 127 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTSS------SCEECCSEEEEECCEEES------CCEEECTTTEEEEECSSS--
T ss_pred heeeecccccccCCcccCcHHHHHhhhccc------ccEecccccccccccccc------cccccccCCceeeeecCC--
Confidence 357889999999999999999999999653 569999999988766664 67888874 77643222
Q ss_pred cCCCcceEEEec-----eeceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEec
Q 045402 106 LGQADNWLSFEG-----VSGVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINR 180 (396)
Q Consensus 106 ~~~~~~~i~~~~-----~~nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~ 180 (396)
+..+.|.. .++++|.| +... + ....+.+.|....+|+++++.|.+...-++.+..
T Consensus 128 ----gn~lvfn~p~~g~ls~~ti~~-----nk~~--d---------s~qg~qvs~~gg~dvsv~~i~fsn~~g~gfslia 187 (542)
T 2x3h_A 128 ----GNYLVFNNPRTGRLSNITVES-----NKAT--D---------TTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIA 187 (542)
T ss_dssp ----SCCEEEESCEEEEEEEEEEEC-----CCSS--T---------TCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEE
T ss_pred ----CCEEEEeCCCCcceeeEEEec-----ccCC--c---------cccceEEEecCCCcceEeeeeeeecCCCceeEEE
Confidence 33343332 45666655 2210 0 1123457888999999999999887665554442
Q ss_pred e------ecEEEEeEEEEcCCCCCC-CCcee-eecceeEEEEccEEecC--CceEEecCCCeeEEEEeeeecCC
Q 045402 181 C------QDVLVEGAKIIAAGDSPN-TDGIH-IQQSRNVKIRSSSIKTG--DDCISIGRGTNNLWIERVTCGPG 244 (396)
Q Consensus 181 ~------~nv~I~~~~i~~~~~~~~-~DGi~-~~~s~nv~I~n~~i~~~--dD~i~~~~~s~ni~i~n~~~~~~ 244 (396)
- +...|++++=.-...+.| .-|.- ++++.|-.|++...++. -.++.++...+.-.++|..-..|
T Consensus 188 yp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~c 261 (542)
T 2x3h_A 188 YPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADC 261 (542)
T ss_dssp ECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESC
T ss_pred cCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccc
Confidence 2 456777777664444322 33444 45889999999999984 46788887544444455443333
No 57
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.40 E-value=1.2e-06 Score=85.17 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=72.1
Q ss_pred ceEEEeceecEEEEeEEEEcCCC---------------CCCCCceeeecceeEEEEccEEecC-----------------
Q 045402 174 YHIVINRCQDVLVEGAKIIAAGD---------------SPNTDGIHIQQSRNVKIRSSSIKTG----------------- 221 (396)
Q Consensus 174 ~~i~~~~~~nv~I~~~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~----------------- 221 (396)
.++.+..++||.|+|++|+...+ ....|+|.+..++||+|++|.|..+
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceee
Confidence 35666677888888888876422 1356899999999999999999864
Q ss_pred -CceEEecCCCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecC
Q 045402 222 -DDCISIGRGTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGT 274 (396)
Q Consensus 222 -dD~i~~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~ 274 (396)
|..+.++.++.+|+|+||.|.+.+ ++-+|+...+........|+|.++.|.+.
T Consensus 228 ~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 228 HDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 556778777899999999998643 56676642111111234799999999764
No 58
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.31 E-value=2.3e-06 Score=82.79 Aligned_cols=100 Identities=16% Similarity=0.247 Sum_probs=72.6
Q ss_pred ceEEEeceecEEEEeEEEEcCCC---------------CCCCCceeeecceeEEEEccEEecC-----------------
Q 045402 174 YHIVINRCQDVLVEGAKIIAAGD---------------SPNTDGIHIQQSRNVKIRSSSIKTG----------------- 221 (396)
Q Consensus 174 ~~i~~~~~~nv~I~~~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~----------------- 221 (396)
.++.+.. +||.|+|++|+...+ ....|+|.+..++||+|++|.|..+
T Consensus 143 ~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 143 GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 3566666 888888888886422 1356999999999999999999864
Q ss_pred -CceEEecCCCeeEEEEeeeecCCc-eEEEEeccccCCCCCEEEEEEEeeEEecC
Q 045402 222 -DDCISIGRGTNNLWIERVTCGPGH-GISIGSLGKDMDEEGVQNVTVWKTVFTGT 274 (396)
Q Consensus 222 -dD~i~~~~~s~ni~i~n~~~~~~~-gi~igs~~~~~~~~~i~ni~i~n~~~~~~ 274 (396)
|..+.++.++.+|+|+||.|.+.+ ++-+|+.-.+.......+|+|.++.+.+.
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 556788877999999999998643 56666642111111235899999999764
No 59
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.25 E-value=5.1e-05 Score=72.12 Aligned_cols=84 Identities=5% Similarity=0.007 Sum_probs=54.2
Q ss_pred cceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCe---------E
Q 045402 207 QSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQN---------G 277 (396)
Q Consensus 207 ~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~---------g 277 (396)
.+.++.++||.|...-|.+..+. ....++||++.+.-.+-+|.. ...|+||++..... |
T Consensus 138 ~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~G~vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~~~g 205 (342)
T 2nsp_A 138 SGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRISGTVDFIFGDG----------TALFNNCDLVSRYRADVKSGNVSG 205 (342)
T ss_dssp TCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEEESEEEEEESS----------EEEEESCEEEECCCTTSCTTSCCE
T ss_pred ccCcEEEEeeEEecccceEEECC--CCEEEEcCEEEeceEEEeCCc----------eEEEecCEEEEecCcccccccCce
Confidence 35778888888888777777765 367888888877667777653 46788888874321 2
Q ss_pred EEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 278 LRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 278 i~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
.|..... ....-..+.|.|+++...
T Consensus 206 -~ItA~~~-~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 206 -YLTAPST-NINQKYGLVITNSRVIRE 230 (342)
T ss_dssp -EEEEECC-BTTCSCCEEEESCEEEES
T ss_pred -EEEccCC-CCCCCCEEEEEcCEEecC
Confidence 3322211 112223378888888754
No 60
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.23 E-value=2.2e-05 Score=74.88 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=96.1
Q ss_pred eEEEEeecceEEeceEEecCC-----cceEEEeceecEEEEeEEEEcCCCC--------CCCCc-eeee-cceeEEEEcc
Q 045402 152 TLSITNSNNVSIKGLLSLNSQ-----MYHIVINRCQDVLVEGAKIIAAGDS--------PNTDG-IHIQ-QSRNVKIRSS 216 (396)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~~~~-----~~~i~~~~~~nv~I~~~~i~~~~~~--------~~~DG-i~~~-~s~nv~I~n~ 216 (396)
.|.+.+++||.|++++|...+ .++|.+..++||.|++|.+....+. ...|| +++. .+.+|+|++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 577889999999999998654 3689999999999999999853210 11254 4554 6899999999
Q ss_pred EEecCCceEEecCC----CeeEEEEeeeecCCc--eEEEEeccccCCCCCEEEEEEEeeEEecC-CeEEEEEeecCCCCc
Q 045402 217 SIKTGDDCISIGRG----TNNLWIERVTCGPGH--GISIGSLGKDMDEEGVQNVTVWKTVFTGT-QNGLRIKSWARPSNG 289 (396)
Q Consensus 217 ~i~~~dD~i~~~~~----s~ni~i~n~~~~~~~--gi~igs~~~~~~~~~i~ni~i~n~~~~~~-~~gi~i~~~~~~~~g 289 (396)
.|...+-+.-+++. ..+|++.++.+.+.. .-++.. -.+++.|+++++. .+++.... +
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~~~--~---- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRG----------GLVHAYNNLYTNITGSGLNVRQ--N---- 247 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEES----------SEEEEESCEEEEESSCSEEEET--T----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCcC----------ceEEEEccEEECCCCceeccCC--C----
Confidence 99976544334431 147999999885421 122211 1678899999873 35655432 1
Q ss_pred eEEeEEEEeEEEecCCccEE
Q 045402 290 FVKGVRFIDAVMQNVQNPII 309 (396)
Q Consensus 290 ~v~nI~~~ni~~~~~~~~i~ 309 (396)
..|.+++..++....|+.
T Consensus 248 --~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 248 --GQALIENNWFEKAINPVT 265 (353)
T ss_dssp --CEEEEESCEEEEEESSEE
T ss_pred --cEEEEEceEEECCCCceE
Confidence 147888888887776653
No 61
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.20 E-value=2.1e-05 Score=75.23 Aligned_cols=129 Identities=9% Similarity=0.178 Sum_probs=97.4
Q ss_pred cceEEeceEEecC-----C------cceEEEec-eecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEE
Q 045402 159 NNVSIKGLLSLNS-----Q------MYHIVINR-CQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCIS 226 (396)
Q Consensus 159 ~nv~i~~v~i~~~-----~------~~~i~~~~-~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 226 (396)
++|+|++++|.+. . .-+|.+.. ++++.|++++|.. +.-||.++.+++++|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 6777777777665 3 23788885 8999999999998 4569999999999999999998889999
Q ss_pred ecCCCeeEEEEeeeecCC-ce--EEEEeccccCCCCCEEEEEEEeeEE-ecCCeEEEEEeecCCCCceEEeEEEEeEEEe
Q 045402 227 IGRGTNNLWIERVTCGPG-HG--ISIGSLGKDMDEEGVQNVTVWKTVF-TGTQNGLRIKSWARPSNGFVKGVRFIDAVMQ 302 (396)
Q Consensus 227 ~~~~s~ni~i~n~~~~~~-~g--i~igs~~~~~~~~~i~ni~i~n~~~-~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~ 302 (396)
++..++...|+|+.+... .| +.+ ....+.+|+++.+ .+.++|+++..... -.|++.+++
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl---------~ns~~~~I~~N~i~~~~R~gIh~m~s~~--------~~i~~N~f~ 273 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLA---------ENHEGLLVTGNNLFPRGRSLIEFTGCNR--------CSVTSNRLQ 273 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEE---------ESEESCEEESCEECSCSSEEEEEESCBS--------CEEESCEEE
T ss_pred eccccccceEecceeeecCCCCEEEE---------EeCCCCEEECCCcccCcceEEEEEccCC--------CEEECCEEe
Confidence 998788999999998764 35 555 2456778999977 55889999874322 445555555
Q ss_pred cCCccEE
Q 045402 303 NVQNPII 309 (396)
Q Consensus 303 ~~~~~i~ 309 (396)
+..+++.
T Consensus 274 ~~~~Gi~ 280 (410)
T 2inu_A 274 GFYPGML 280 (410)
T ss_dssp ESSSCSE
T ss_pred cceeEEE
Confidence 4444433
No 62
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.18 E-value=5.3e-05 Score=72.38 Aligned_cols=157 Identities=15% Similarity=0.160 Sum_probs=98.8
Q ss_pred ceEEec-eeEeCCCCcccccccccCCCCCCCceeEEEE-eecceEEeceEEecC------CcceEEEeceecEEEEeEEE
Q 045402 120 GVSIIG-GALDAKGTSLWACKAAAGTTCPNGATTLSIT-NSNNVSIKGLLSLNS------QMYHIVINRCQDVLVEGAKI 191 (396)
Q Consensus 120 nv~I~G-G~idg~g~~~~~~~~~~~~~~~~~~~~i~~~-~~~nv~i~~v~i~~~------~~~~i~~~~~~nv~I~~~~i 191 (396)
.+.|.. -+|.|.|.. ... ....|.+. .++||.|++++|.+. ..++|.+..+++|.|++|++
T Consensus 103 ~l~v~snkTI~G~G~~---~~i--------~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~ 171 (359)
T 1idk_A 103 GITVTSNKSLIGEGSS---GAI--------KGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTT 171 (359)
T ss_dssp CEEECSSEEEEECTTT---CEE--------ESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEE
T ss_pred eEEeCCCceEEEecCC---eEE--------ecceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEe
Confidence 355544 677777641 010 12247777 899999999999973 23689999999999999999
Q ss_pred EcCCCCCCCCcee---eecceeEEEEccEEecCCc-----------eEEecCCCeeEEEEeeeecCCce--EEEEecccc
Q 045402 192 IAAGDSPNTDGIH---IQQSRNVKIRSSSIKTGDD-----------CISIGRGTNNLWIERVTCGPGHG--ISIGSLGKD 255 (396)
Q Consensus 192 ~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~dD-----------~i~~~~~s~ni~i~n~~~~~~~g--i~igs~~~~ 255 (396)
.... |+.. ...+.+|+|++|.|...++ ...+...+.++++.++.+.+..+ -++.
T Consensus 172 s~~~-----d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r----- 241 (359)
T 1idk_A 172 ARIG-----RQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ----- 241 (359)
T ss_dssp EEES-----SCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC-----
T ss_pred ecCC-----CCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc-----
Confidence 9643 3333 4568999999999985431 23333325678888887754221 1110
Q ss_pred CCCCCEEEEEEEeeEEecC-CeEEEEEeecCCCCceEEeEEEEeEEEecCCccEE
Q 045402 256 MDEEGVQNVTVWKTVFTGT-QNGLRIKSWARPSNGFVKGVRFIDAVMQNVQNPII 309 (396)
Q Consensus 256 ~~~~~i~ni~i~n~~~~~~-~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~ 309 (396)
.-+.+++.|+++++. .+++.+.. + ..|.+++..+++...|+.
T Consensus 242 ----~g~~~hv~NN~~~n~~~~~i~~~~--~------~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 242 ----DNTLLHAVNNYWYDISGHAFEIGE--G------GYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp ----TTCEEEEESCEEEEEEEEEEEECT--T------CEEEEESCEEEEEEEEEE
T ss_pred ----CCceEEEECCEEecccceEEeccC--C------cEEEEEccEEECCCCcee
Confidence 012577788877763 34444321 1 247777777776655543
No 63
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.14 E-value=6e-05 Score=72.95 Aligned_cols=134 Identities=13% Similarity=0.164 Sum_probs=89.4
Q ss_pred eEEEEeecceEEeceEEecC-------------------CcceEEEeceecEEEEeEEEEcCCCC------------CCC
Q 045402 152 TLSITNSNNVSIKGLLSLNS-------------------QMYHIVINRCQDVLVEGAKIIAAGDS------------PNT 200 (396)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~~~-------------------~~~~i~~~~~~nv~I~~~~i~~~~~~------------~~~ 200 (396)
.|.+.. +||.|++++|.+. ..++|.+..++||.|++|++....+. ...
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 466777 8999999999753 23579999999999999999964210 013
Q ss_pred Cc-eeee-cceeEEEEccEEecCCceEEecCC--------CeeEEEEeeeecCCc--eEEEEeccccCCCCCEEEEEEEe
Q 045402 201 DG-IHIQ-QSRNVKIRSSSIKTGDDCISIGRG--------TNNLWIERVTCGPGH--GISIGSLGKDMDEEGVQNVTVWK 268 (396)
Q Consensus 201 DG-i~~~-~s~nv~I~n~~i~~~dD~i~~~~~--------s~ni~i~n~~~~~~~--gi~igs~~~~~~~~~i~ni~i~n 268 (396)
|| +++. .+.+|||++|.|...+-+.-+++. -.+|++.+|.+.+.. .-++. . -.+++-|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R--------~--G~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR--------F--GQVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES--------S--CEEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc--------c--ceEEEEc
Confidence 55 3555 689999999999987655555542 127999999985422 12221 0 1488999
Q ss_pred eEEecCC--------eEEEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 269 TVFTGTQ--------NGLRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 269 ~~~~~~~--------~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
+++++.. +++.. ..+ ..|.+++..++..
T Consensus 293 N~~~n~~~~~~~~~~ya~g~--~~~------~~i~~e~N~F~~~ 328 (399)
T 2o04_A 293 NYYEGSTSSSSYPFSYAWGI--GKS------SKIYAQNNVIDVP 328 (399)
T ss_dssp CEEECCTTCSSSCCCCSEEE--CTT------CEEEEESCEEECT
T ss_pred ceEECCCCCCccceeeEecc--CCC------cEEEEEceEEECC
Confidence 9997642 23322 111 2477888888765
No 64
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.12 E-value=8.6e-05 Score=70.96 Aligned_cols=135 Identities=14% Similarity=0.100 Sum_probs=87.7
Q ss_pred eEEEE-eecceEEeceEEecCC------cceEEEeceecEEEEeEEEEcCCCCCCCCcee---eecceeEEEEccEEecC
Q 045402 152 TLSIT-NSNNVSIKGLLSLNSQ------MYHIVINRCQDVLVEGAKIIAAGDSPNTDGIH---IQQSRNVKIRSSSIKTG 221 (396)
Q Consensus 152 ~i~~~-~~~nv~i~~v~i~~~~------~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~ 221 (396)
.|.+. .++||.|++++|.+.. .++|.+..+++|.|++|++.... |+.. ...+.+|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~-----d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIG-----RQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEES-----SCSEEECSSCCEEEEEESCEEECB
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccC-----cCceeecccccccEEEECcEecCC
Confidence 47787 8999999999999742 36899999999999999999643 3332 34689999999999853
Q ss_pred C-----------ceEEecCCCeeEEEEeeeecCCce--EEEEeccccCCCCCEEEEEEEeeEEecC-CeEEEEEeecCCC
Q 045402 222 D-----------DCISIGRGTNNLWIERVTCGPGHG--ISIGSLGKDMDEEGVQNVTVWKTVFTGT-QNGLRIKSWARPS 287 (396)
Q Consensus 222 d-----------D~i~~~~~s~ni~i~n~~~~~~~g--i~igs~~~~~~~~~i~ni~i~n~~~~~~-~~gi~i~~~~~~~ 287 (396)
. .+.-+...+.++++.++.+.+..+ -++. .-..+++.|+++++. .+++....
T Consensus 200 ~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~~----- 265 (359)
T 1qcx_A 200 SDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIGT----- 265 (359)
T ss_dssp CSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEECT-----
T ss_pred ccccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecCC-----
Confidence 2 133332225677888777654211 1110 013577778877763 23333221
Q ss_pred CceEEeEEEEeEEEecCCccE
Q 045402 288 NGFVKGVRFIDAVMQNVQNPI 308 (396)
Q Consensus 288 ~g~v~nI~~~ni~~~~~~~~i 308 (396)
-..|.+++..++....|+
T Consensus 266 ---~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 266 ---GGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp ---TEEEEEESCEEEEEEEEE
T ss_pred ---CceEEEEeeEEECCCccc
Confidence 134777777777665443
No 65
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.10 E-value=0.00022 Score=67.01 Aligned_cols=134 Identities=12% Similarity=0.190 Sum_probs=93.9
Q ss_pred EEEEeecceEEeceEEecCC---cceEEEec-eecEEEEeEEEEcCC----CCCCCCc-eeee-cceeEEEEccEEecCC
Q 045402 153 LSITNSNNVSIKGLLSLNSQ---MYHIVINR-CQDVLVEGAKIIAAG----DSPNTDG-IHIQ-QSRNVKIRSSSIKTGD 222 (396)
Q Consensus 153 i~~~~~~nv~i~~v~i~~~~---~~~i~~~~-~~nv~I~~~~i~~~~----~~~~~DG-i~~~-~s~nv~I~n~~i~~~d 222 (396)
|.+.+++||.|++++|.+.. .++|.+.. ++||.|++|++.... +....|| +++. .+.+|||++|.|...+
T Consensus 97 l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~ 176 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHW 176 (326)
T ss_dssp EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEE
T ss_pred EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCc
Confidence 67778999999999999764 56899997 999999999997421 1112354 4554 5899999999999876
Q ss_pred ceEEecCC------CeeEEEEeeeecCCc--eEEEEeccccCCCCCEEEEEEEeeEEecC-CeEEEEEeecCCCCceEEe
Q 045402 223 DCISIGRG------TNNLWIERVTCGPGH--GISIGSLGKDMDEEGVQNVTVWKTVFTGT-QNGLRIKSWARPSNGFVKG 293 (396)
Q Consensus 223 D~i~~~~~------s~ni~i~n~~~~~~~--gi~igs~~~~~~~~~i~ni~i~n~~~~~~-~~gi~i~~~~~~~~g~v~n 293 (396)
-+.-+++. -.+|++.++.+.+.. .-++.. -.+++.|+.+++. .+++.... + ..
T Consensus 177 k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~~~--~------a~ 238 (326)
T 3vmv_A 177 KTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIRY----------ADVHMFNNYFKDINDTAINSRV--G------AR 238 (326)
T ss_dssp ECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEES----------CEEEEESCEEEEESSCSEEEET--T------CE
T ss_pred eEEEECCCCCCcccCccEEEEeeEecCCcCcCCcccC----------CcEEEEccEEECCCceEEeecC--C------cE
Confidence 66666652 137999999885421 112210 1688999999874 46665542 1 34
Q ss_pred EEEEeEEEecC
Q 045402 294 VRFIDAVMQNV 304 (396)
Q Consensus 294 I~~~ni~~~~~ 304 (396)
|.+|+..+++.
T Consensus 239 v~~e~N~F~~~ 249 (326)
T 3vmv_A 239 VFVENNYFDNV 249 (326)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEceEEECC
Confidence 77777777765
No 66
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.97 E-value=6.3e-05 Score=73.15 Aligned_cols=135 Identities=12% Similarity=0.118 Sum_probs=91.5
Q ss_pred eEEEEeecceEEeceEEecC-------------------CcceEEEeceecEEEEeEEEEcCCCC------------CCC
Q 045402 152 TLSITNSNNVSIKGLLSLNS-------------------QMYHIVINRCQDVLVEGAKIIAAGDS------------PNT 200 (396)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~~~-------------------~~~~i~~~~~~nv~I~~~~i~~~~~~------------~~~ 200 (396)
.|.+.+++||.|++++|.+. ..++|.+..++||.|++|++....+. ...
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47777899999999999753 23679999999999999999964210 013
Q ss_pred Cc-eeee-cceeEEEEccEEecCCceEEecCCC--------eeEEEEeeeecCCc--eEEEEeccccCCCCCEEEEEEEe
Q 045402 201 DG-IHIQ-QSRNVKIRSSSIKTGDDCISIGRGT--------NNLWIERVTCGPGH--GISIGSLGKDMDEEGVQNVTVWK 268 (396)
Q Consensus 201 DG-i~~~-~s~nv~I~n~~i~~~dD~i~~~~~s--------~ni~i~n~~~~~~~--gi~igs~~~~~~~~~i~ni~i~n 268 (396)
|| +++. .+.+|||++|.|...+-+.-+++.- -+|++.+|.|.+.. .-++. . -.+++.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R--------~--G~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVR--------F--GQVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEES--------S--CEEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCcccc--------c--ceEEEEc
Confidence 55 4555 6899999999999876555555421 26999999985422 12220 0 1488999
Q ss_pred eEEecCC-------eEEEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 269 TVFTGTQ-------NGLRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 269 ~~~~~~~-------~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
+++++.. +++.... + ..|.+|+..++..
T Consensus 299 N~~~n~~~~~~~~~ya~g~~~--~------~~i~~E~N~F~~~ 333 (416)
T 1vbl_A 299 NYYEFSNLADYDFQYAWGVGV--F------SQIYAQNNYFSFD 333 (416)
T ss_dssp CEEEECTTSSSCCCCSEEEET--T------CEEEEESCEEEES
T ss_pred ceEECCCCCcccceeEeccCC--C------cEEEEECCEEECC
Confidence 9998532 3343321 1 2378888888765
No 67
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.96 E-value=0.00015 Score=69.14 Aligned_cols=137 Identities=18% Similarity=0.209 Sum_probs=90.8
Q ss_pred eEEEEeecceEEeceEEecC---------------CcceEEEeceecEEEEeEEEEcCCCC---------C---CCCc-e
Q 045402 152 TLSITNSNNVSIKGLLSLNS---------------QMYHIVINRCQDVLVEGAKIIAAGDS---------P---NTDG-I 203 (396)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~~~---------------~~~~i~~~~~~nv~I~~~~i~~~~~~---------~---~~DG-i 203 (396)
.|.+.+++||.|++++|.+. ..++|.+..++||.|++|++....+. . ..|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 46677899999999999853 13579999999999999999863210 0 1355 4
Q ss_pred eee-cceeEEEEccEEecCCceEEecCCC---------eeEEEEeeeecCCc--eEEEEeccccCCCCCEEEEEEEeeEE
Q 045402 204 HIQ-QSRNVKIRSSSIKTGDDCISIGRGT---------NNLWIERVTCGPGH--GISIGSLGKDMDEEGVQNVTVWKTVF 271 (396)
Q Consensus 204 ~~~-~s~nv~I~n~~i~~~dD~i~~~~~s---------~ni~i~n~~~~~~~--gi~igs~~~~~~~~~i~ni~i~n~~~ 271 (396)
++. .+.+|||++|.|...+-+.-+++.. .+|++.+|.|.+.. .-++. .-.+++.|+++
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR----------~G~~Hv~NN~~ 246 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR----------FGSIHAYNNVY 246 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCcee----------cceEEEEcceE
Confidence 455 6899999999999877666565421 26999999986532 12221 01378889988
Q ss_pred ecCC-eE-----EEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 272 TGTQ-NG-----LRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 272 ~~~~-~g-----i~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
++.. .+ -.+.. +.-..|.+|+..++..
T Consensus 247 ~~~~~~~~~~~~ya~g~------~~~~~i~~e~N~F~~~ 279 (355)
T 1pcl_A 247 LGDVKHSVYPYLYSFGL------GTSGSILSESNSFTLS 279 (355)
T ss_pred EcccCCCccccceEecC------CCCcEEEEEccEEECC
Confidence 7531 11 12211 1123477888888765
No 68
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.69 E-value=0.00015 Score=70.57 Aligned_cols=109 Identities=9% Similarity=0.036 Sum_probs=83.0
Q ss_pred eEEEEeecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecc-eeEEEEccEEecC---------
Q 045402 152 TLSITNSNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQS-RNVKIRSSSIKTG--------- 221 (396)
Q Consensus 152 ~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s-~nv~I~n~~i~~~--------- 221 (396)
.+.+ ..++++|++++|.+....+|.+.. .+.+|++|+++.. ...||.+... .+.+|++|.++..
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 3555 688999999999988777998887 7789999999974 2349999864 4899999999864
Q ss_pred CceEEecCC-CeeEEEEeeeecCC--ceEEEEeccccCCCCCEEEEEEEeeEEecC
Q 045402 222 DDCISIGRG-TNNLWIERVTCGPG--HGISIGSLGKDMDEEGVQNVTVWKTVFTGT 274 (396)
Q Consensus 222 dD~i~~~~~-s~ni~i~n~~~~~~--~gi~igs~~~~~~~~~i~ni~i~n~~~~~~ 274 (396)
.||++++.. .++.+|++|.++.. .|+.+. .....++|+||..++.
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~--------~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF--------DSPQKVVIENSWAFRN 230 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECT--------TCCSCCEEESCEEEST
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEE--------ecCCCEEEEeEEEECC
Confidence 268888752 37889999998753 477662 1223578999998764
No 69
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.49 E-value=0.00039 Score=66.34 Aligned_cols=112 Identities=21% Similarity=0.285 Sum_probs=77.1
Q ss_pred eEEE---EeecceEEeceEEecC---------------CcceEEEec-eecEEEEeEEEEcCCCC------------CCC
Q 045402 152 TLSI---TNSNNVSIKGLLSLNS---------------QMYHIVINR-CQDVLVEGAKIIAAGDS------------PNT 200 (396)
Q Consensus 152 ~i~~---~~~~nv~i~~v~i~~~---------------~~~~i~~~~-~~nv~I~~~~i~~~~~~------------~~~ 200 (396)
.|.+ .+++||.|++++|.+. ..++|.+.. ++||.|++|++....+. .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 3556 4688999999999853 145899999 99999999999964210 013
Q ss_pred Cc-eeee-cceeEEEEccEEecCCceEEecCC-C--------eeEEEEeeeecCCc--eEEEEeccccCCCCCEEEEEEE
Q 045402 201 DG-IHIQ-QSRNVKIRSSSIKTGDDCISIGRG-T--------NNLWIERVTCGPGH--GISIGSLGKDMDEEGVQNVTVW 267 (396)
Q Consensus 201 DG-i~~~-~s~nv~I~n~~i~~~dD~i~~~~~-s--------~ni~i~n~~~~~~~--gi~igs~~~~~~~~~i~ni~i~ 267 (396)
|| +++. .+.+|||++|.|...+-+.-+++. + -+|++.++.+.+.. .-++ ..-.+++.
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~----------R~G~~Hv~ 253 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV----------RYGSIHSF 253 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE----------SSCEEEEE
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccc----------ccceEEEE
Confidence 55 5565 689999999999986655555542 1 26999999985421 1112 01148899
Q ss_pred eeEEec
Q 045402 268 KTVFTG 273 (396)
Q Consensus 268 n~~~~~ 273 (396)
|+++++
T Consensus 254 NN~~~~ 259 (361)
T 1pe9_A 254 NNVFKG 259 (361)
T ss_dssp SCEEEE
T ss_pred cceEec
Confidence 999964
No 70
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.48 E-value=0.0049 Score=59.45 Aligned_cols=47 Identities=26% Similarity=0.207 Sum_probs=32.7
Q ss_pred cHHHHHHHHHHHhhc--CCCcEEEEcCcEEEeccccccCcccCccEEEEEcC
Q 045402 46 STEAFAKAWAAACAS--NESTIIYVPKGRYLLGSVAFKGECQSSDITFQIDG 95 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~--~~g~~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G 95 (396)
+-..||+||+++... ..--+|+|.+|+|... |.++.. |. +++|+++|
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E~-V~Ip~~-K~-~ItL~G~G 136 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGT-VYVPAA-PG-GITLYGTG 136 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSEEEESC-EEECCC-SS-CEEEEECS
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCCeEeee-EEecCC-CC-cEEEEecc
Confidence 445699999876221 2235899999999864 555422 24 89999987
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=97.05 E-value=0.0018 Score=62.25 Aligned_cols=120 Identities=17% Similarity=0.176 Sum_probs=71.8
Q ss_pred cEEEEEcCEEEeeccccccCCC----cceEEEeceeceEEec-ee-EeCCCCcccccccccCCCCCCCceeEEEEeecce
Q 045402 88 DITFQIDGTLVAPADYRVLGQA----DNWLSFEGVSGVSIIG-GA-LDAKGTSLWACKAAAGTTCPNGATTLSITNSNNV 161 (396)
Q Consensus 88 ~v~l~~~G~l~~~~~~~~~~~~----~~~i~~~~~~nv~I~G-G~-idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv 161 (396)
|++|.+.|+|-+... .|... +. ......++|.+++ .. +..++ +| .+++..|+++
T Consensus 147 NIaITG~GTIDG~g~--n~t~e~~~~Rq-~~~~~fdnV~Vn~Vt~~v~~Sg--~W---------------TIhPi~Cqnv 206 (514)
T 2vbk_A 147 NIRVTGNNTCNGIDT--NITAEDSVIRQ-VYGWVFDNVMVNEVETAYLMQG--LW---------------HSKFIACQAG 206 (514)
T ss_dssp SCEEECCSSSEEEEE--SCCTTCSSCCC-EESEEEESCEEEEEEEEEEEES--EE---------------EEEEESCEEE
T ss_pred EEEEECCCeEeCCCC--Cccccceeeec-cceEEeeeEEEEeEEEeEeccC--cE---------------EEeEeccCce
Confidence 788888777655211 12111 11 1111257888888 32 22222 24 4788999999
Q ss_pred EEe-ceEEecCCcceEEEeceecEEEEeEEEEcCCCCC-CCCceee------ecceeEEEEccEEecCCceEEecCC---
Q 045402 162 SIK-GLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSP-NTDGIHI------QQSRNVKIRSSSIKTGDDCISIGRG--- 230 (396)
Q Consensus 162 ~i~-~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~-~~DGi~~------~~s~nv~I~n~~i~~~dD~i~~~~~--- 230 (396)
+++ ++.+. .+|+||.|++|+|...+|.- -.-|.-. ..|+++. +.+|.++++
T Consensus 207 t~r~gL~f~---------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hgav~igSE~m~ 268 (514)
T 2vbk_A 207 TCRVGLHFL---------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSETMC 268 (514)
T ss_dssp EEEEEEEEE---------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESSEEE
T ss_pred ecccCcccc---------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------cccEEECchhhc
Confidence 988 66664 37999999999999866520 0111111 2345554 556777664
Q ss_pred --Cee-EEEEeeeecCCc
Q 045402 231 --TNN-LWIERVTCGPGH 245 (396)
Q Consensus 231 --s~n-i~i~n~~~~~~~ 245 (396)
.+| +.|++|.+...+
T Consensus 269 ~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 269 IGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ESCSEEEEESCCEEEEEE
T ss_pred ccccccEEEEeeeccCCc
Confidence 578 888888876543
No 72
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.86 E-value=0.039 Score=51.61 Aligned_cols=115 Identities=9% Similarity=0.077 Sum_probs=81.1
Q ss_pred EEEeceecEEEEeEEEEcCCCC--CCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEecc
Q 045402 176 IVINRCQDVLVEGAKIIAAGDS--PNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLG 253 (396)
Q Consensus 176 i~~~~~~nv~I~~~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~ 253 (396)
+.+ .+++++++|++|.+.... .-+-++.+. +.++.++||.|....|.+..+. .++ .++||++.+.-.+-+|..
T Consensus 85 v~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r~-~~~~c~I~G~vDFIfG~~- 159 (317)
T 1xg2_A 85 LAA-VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHS-QRQ-FYRDSYVTGTVDFIFGNA- 159 (317)
T ss_dssp EEE-CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECS-SEE-EEESCEEEESSSCEEECC-
T ss_pred EEE-ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecC-ccE-EEEeeEEEeceeEEcCCc-
Confidence 444 678999999999986432 233466664 6889999999999888998887 444 899999987666767652
Q ss_pred ccCCCCCEEEEEEEeeEEecCC-----eEEEEEeecCCCCceEEeEEEEeEEEecCC
Q 045402 254 KDMDEEGVQNVTVWKTVFTGTQ-----NGLRIKSWARPSNGFVKGVRFIDAVMQNVQ 305 (396)
Q Consensus 254 ~~~~~~~i~ni~i~n~~~~~~~-----~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~ 305 (396)
...|+||++.... .+ .|-.........-....|.|+++....
T Consensus 160 ---------~avf~~c~i~~~~~~~~~~~-~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 160 ---------AVVFQKCQLVARKPGKYQQN-MVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp ---------EEEEESCEEEECCCSTTCCE-EEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred ---------eEEEeeeEEEEeccCCCCcc-EEEecCcCCCCCCcEEEEECCEEecCC
Confidence 4779999998632 23 333332222334556889999997644
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.81 E-value=0.14 Score=43.44 Aligned_cols=127 Identities=15% Similarity=0.169 Sum_probs=60.0
Q ss_pred EEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEec-CCceEEecCCCeeEEEEeeeecCCce--EEEEeccccCCCCC
Q 045402 184 VLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKT-GDDCISIGRGTNNLWIERVTCGPGHG--ISIGSLGKDMDEEG 260 (396)
Q Consensus 184 v~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~~~~~s~ni~i~n~~~~~~~g--i~igs~~~~~~~~~ 260 (396)
.+++|+.|-. +..||||.. -+.+|+|+.+.. +.|++.++. +..++|.+.-..++.. +.. ..
T Consensus 54 aTLkNvIIG~----~~~dGIHC~--G~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~---------Ng 117 (196)
T 3t9g_A 54 ANLKNVIIGA----PGCDGIHCY--GDNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQL---------NA 117 (196)
T ss_dssp CEEEEEEECS----CCTTCEEEC--SSEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEE---------CS
T ss_pred CEEEEEEECC----CCcCcEEEc--CCEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEE---------CC
Confidence 3445555433 134666664 245666666655 566666664 4445555444333222 221 11
Q ss_pred EEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCCccEEEEeecCCCCCCCCCCCcceEEEeEEEEeEEE
Q 045402 261 VQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRG 340 (396)
Q Consensus 261 i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ni~~~ni~~ 340 (396)
--.+.|+|.+..+ .|-..++..+ ...=|+|.++|+++.+.+..+.= .+ + ......+.|+.+.|+.-
T Consensus 118 ~Gtv~I~nF~~~~--~GKl~RSCGn--c~~~r~v~i~~v~~~n~k~~l~r-td--S-------~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 118 PCTFKVKNFTATN--IGKLVRQNGN--TTFKVVIYLEDVTLNNVKSCVAK-SD--S-------PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp SEEEEEEEEEEEE--EEEEEEECTT--CCSCEEEEEEEEEEEEEEEEEEE-CC--C-------TTCEEEEEEEEEEEEEE
T ss_pred CceEEEeeEEEcc--CCEEEEcCCC--CCceeEEEEeCeEEeCCEEEEEE-cC--C-------CCCEEEEecceecCCCc
Confidence 1245555555553 2333333321 12235666666666665433221 10 0 11345667777776653
No 74
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.81 E-value=0.035 Score=52.00 Aligned_cols=115 Identities=7% Similarity=0.067 Sum_probs=81.2
Q ss_pred EEEeceecEEEEeEEEEcCCCC--CCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCCceEEEEecc
Q 045402 176 IVINRCQDVLVEGAKIIAAGDS--PNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPGHGISIGSLG 253 (396)
Q Consensus 176 i~~~~~~nv~I~~~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~~gi~igs~~ 253 (396)
+.+ .+++++++|++|.+.... .-+-++.+. +.++.++||.|....|.+..+. .+ ..++||++.+.-.+-+|..
T Consensus 89 v~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~- 163 (319)
T 1gq8_A 89 VAA-VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGNA- 163 (319)
T ss_dssp EEE-CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEESC-
T ss_pred EEE-ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecCC-
Confidence 444 578999999999986432 233466664 6889999999999888998887 44 4999999987666666652
Q ss_pred ccCCCCCEEEEEEEeeEEecCC-----eEEEEEeecCCCCceEEeEEEEeEEEecCC
Q 045402 254 KDMDEEGVQNVTVWKTVFTGTQ-----NGLRIKSWARPSNGFVKGVRFIDAVMQNVQ 305 (396)
Q Consensus 254 ~~~~~~~i~ni~i~n~~~~~~~-----~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~ 305 (396)
...|+||++.... .+ .|-.........-....|.|+++....
T Consensus 164 ---------~a~f~~c~i~~~~~~~~~~~-~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 164 ---------AVVLQDCDIHARRPGSGQKN-MVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp ---------EEEEESCEEEECCCSTTCCE-EEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred ---------cEEEEeeEEEEecCCCCCce-EEEeCCCCCCCCCceEEEECCEEecCC
Confidence 4779999998632 23 333332222344556899999997654
No 75
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.42 E-value=0.26 Score=41.84 Aligned_cols=132 Identities=13% Similarity=0.088 Sum_probs=95.0
Q ss_pred ecceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEE
Q 045402 158 SNNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIE 237 (396)
Q Consensus 158 ~~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~ 237 (396)
-+..+++|+.|-.....+||... +.+|+|++...- ..|.+.+.++..++|.+.-.++.+|-+--..+...+.|+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~G--~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 124 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCYG--DNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVK 124 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEECS--SEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEECCCCcCcEEEcC--CEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEe
Confidence 46789999999777788999864 788999998874 558899988888999999999987766555556788888
Q ss_pred eeeecCCceEEEEeccccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCC
Q 045402 238 RVTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQ 305 (396)
Q Consensus 238 n~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~ 305 (396)
|.+..+ .|--+-|-|. ...-++|.++|+++.+....+ +++. ..-..+++.|+++.++.
T Consensus 125 nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtd-----S~~~~~~~~n~~~~~~~ 182 (196)
T 3t9g_A 125 NFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSD-----SPVSELWYHNLNVNNCK 182 (196)
T ss_dssp EEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECC-----CTTCEEEEEEEEEEEEE
T ss_pred eEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcC-----CCCCEEEEecceecCCC
Confidence 877643 3433334432 234589999999999864443 3332 12245777777777665
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=96.16 E-value=0.31 Score=41.47 Aligned_cols=106 Identities=11% Similarity=0.055 Sum_probs=56.0
Q ss_pred cceEEeceEEecCCcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEe
Q 045402 159 NNVSIKGLLSLNSQMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIER 238 (396)
Q Consensus 159 ~nv~i~~v~i~~~~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n 238 (396)
+..+|+|+.|-.+...+||... +.+|+|++...- ..|.+.+.++..++|.+.-.++.+|-+--..+...+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 5666777777555556666653 456666666653 3455666555566666666666555444333344556655
Q ss_pred eeecCCceEEEEeccccCCCCCEEEEEEEeeEEecC
Q 045402 239 VTCGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGT 274 (396)
Q Consensus 239 ~~~~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~ 274 (396)
.+.. ..|=-+-|-|.- ..-++|.++|+++.+.
T Consensus 122 F~~~-~~GKl~RScGnc---~~~r~v~i~~v~~~~~ 153 (197)
T 1ee6_A 122 FRAD-DIGKLVRQNGGT---TYKVVMNVENCNISRV 153 (197)
T ss_dssp CEEE-EEEEEEEECTTC---CSCEEEEEESCEEEEE
T ss_pred EEEc-cCCEEEEcCCCC---ccceEEEEeceEEECc
Confidence 4432 122112232211 1235666666666654
No 77
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=96.00 E-value=0.41 Score=44.23 Aligned_cols=89 Identities=10% Similarity=0.090 Sum_probs=40.2
Q ss_pred ceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCcceEEEe-ceecEEEEeEEEEcCCCCC
Q 045402 120 GVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVIN-RCQDVLVEGAKIIAAGDSP 198 (396)
Q Consensus 120 nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~-~~~nv~I~~~~i~~~~~~~ 198 (396)
.-+|.|+++||.+.+|- . .-+++.... ..+|.+.. .-+++++.|-.....+||.. . +.+|+|+....-
T Consensus 124 ~~~i~g~t~Dgg~k~~~-~-~c~~q~E~q-~~vF~le~--GatlkNvIiG~~~~dGIHC~~G--~CtleNVwwedV---- 192 (344)
T 3b4n_A 124 GATFENRTVDCGGVTIG-T-SCPNDSDKQ-KPLIILKN--ATVKNLRISASGGADGIHCDSG--NCTIENVIWEDI---- 192 (344)
T ss_dssp TEEEESSEEECTTCEEC-C-CCCTTCSCC-CCSEEEES--CEEEEEEECTTCCTTCEEEEES--EEEEEEEEESSC----
T ss_pred ceeEecceEcCCCcEEC-C-CCCCccccC-ccEEEEcc--CcEEEEEEecCCCccceEEccC--CeeEEEEeehhc----
Confidence 45677888899887752 1 111121112 23344442 34555555544444444443 2 244444444432
Q ss_pred CCCceeeecceeEEEEccEEec
Q 045402 199 NTDGIHIQQSRNVKIRSSSIKT 220 (396)
Q Consensus 199 ~~DGi~~~~s~nv~I~n~~i~~ 220 (396)
..|.+.+.+ ..++|.+.-.++
T Consensus 193 cEDA~T~kg-~~~~I~GGgA~~ 213 (344)
T 3b4n_A 193 CEDAATNNG-KTMTIVGGIAHN 213 (344)
T ss_dssp SSCSEEECS-SEEEEESCEEEE
T ss_pred ccccceecC-ceEEEECchhcc
Confidence 223444432 334444444443
No 78
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.71 E-value=0.073 Score=53.01 Aligned_cols=141 Identities=6% Similarity=0.054 Sum_probs=96.4
Q ss_pred eecceEEeceEEecC-CcceEEEeceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCC-----ceEEecCC
Q 045402 157 NSNNVSIKGLLSLNS-QMYHIVINRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGD-----DCISIGRG 230 (396)
Q Consensus 157 ~~~nv~i~~v~i~~~-~~~~i~~~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~d-----D~i~~~~~ 230 (396)
...+.+|++-.+.++ ....+....+.+.+|++.++... ..||.+..+++.+|++..|.... .||.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 357888888877765 23456666666789999999973 34798888888899999998753 6788855
Q ss_pred CeeEEEEeeeecCCc--------eEEEEecccc-CCCCCEEEEEEEeeEEecCCe-EEEEE----------eecCCCCce
Q 045402 231 TNNLWIERVTCGPGH--------GISIGSLGKD-MDEEGVQNVTVWKTVFTGTQN-GLRIK----------SWARPSNGF 290 (396)
Q Consensus 231 s~ni~i~n~~~~~~~--------gi~igs~~~~-~~~~~i~ni~i~n~~~~~~~~-gi~i~----------~~~~~~~g~ 290 (396)
. +.+|+|++|.+.. |+.+.. |.+ .....+++++|++++|.++.. ||.+. .........
T Consensus 300 ~-~~~I~nN~f~~~~g~~~~~~~GI~i~~-G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~ 377 (506)
T 1dbg_A 300 S-RHVIACNYFELSETIKSRGNAALYLNP-GAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFET 377 (506)
T ss_dssp B-SCEEESCEEEESSBCGGGTSEEEEECC-BCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBC
T ss_pred C-CCEEECCEEECCcCccccccccEEEec-CCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccC
Confidence 3 4499999987643 555521 110 112457899999999999886 99997 111111133
Q ss_pred EEeEEEEeEEEecCC
Q 045402 291 VKGVRFIDAVMQNVQ 305 (396)
Q Consensus 291 v~nI~~~ni~~~~~~ 305 (396)
=.|++|.|.-+.+..
T Consensus 378 p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 378 PHQLMLKGNLFFKDK 392 (506)
T ss_dssp CCSEEEESCEEECCS
T ss_pred CCcEEEEccEEEcCC
Confidence 457888887776554
No 79
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=95.70 E-value=0.24 Score=42.20 Aligned_cols=110 Identities=12% Similarity=0.180 Sum_probs=73.3
Q ss_pred ecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEec-CCceEEecCCCeeEEEEeeeecCCce--EEEEeccccCCC
Q 045402 182 QDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKT-GDDCISIGRGTNNLWIERVTCGPGHG--ISIGSLGKDMDE 258 (396)
Q Consensus 182 ~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~~~~~s~ni~i~n~~~~~~~g--i~igs~~~~~~~ 258 (396)
...+++|+.|-.+ ..||||..+ +.+|+|+.+.. +.|++.++. +..++|.+.-..+... +..
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~--------- 111 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQI--------- 111 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEE---------
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEe---------
Confidence 3678999999763 679999975 59999999987 899999986 5566666655444333 222
Q ss_pred CCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCCccEEEE
Q 045402 259 EGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQNPIIID 311 (396)
Q Consensus 259 ~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~~i~i~ 311 (396)
..--.+.|+|.+..+ .|=..++..+ . ..-|+|.++|+++.+....+...
T Consensus 112 Ng~Gtv~I~nF~~~~--~GKl~RScGn-c-~~~r~v~i~~v~~~~~k~~i~~~ 160 (197)
T 1ee6_A 112 NAAGTINIRNFRADD--IGKLVRQNGG-T-TYKVVMNVENCNISRVKDAILRT 160 (197)
T ss_dssp CSSEEEEEESCEEEE--EEEEEEECTT-C-CSCEEEEEESCEEEEEEEEEEEC
T ss_pred cCCceEEEeeEEEcc--CCEEEEcCCC-C-ccceEEEEeceEEECceEEEEEe
Confidence 122357788877653 3444444422 1 12378889999888876554443
No 80
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=94.85 E-value=0.33 Score=46.16 Aligned_cols=114 Identities=10% Similarity=0.040 Sum_probs=80.0
Q ss_pred eceecEEEEeEEEEcCCC----------------CCCCCceeee-cceeEEEEccEEecCCceEEecCCCeeEEEEeeee
Q 045402 179 NRCQDVLVEGAKIIAAGD----------------SPNTDGIHIQ-QSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTC 241 (396)
Q Consensus 179 ~~~~nv~I~~~~i~~~~~----------------~~~~DGi~~~-~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~ 241 (396)
..+++++++|++|+|... ..-+-++.+. .+.+..++||.|...-|.+..+. .....+++|++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I 197 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEI 197 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEE
Confidence 356899999999998742 0112355554 47899999999999889998874 46889999999
Q ss_pred cCCceEEEEeccccCCCCCEEEEEEEeeEEecCC------eEEEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 242 GPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQ------NGLRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 242 ~~~~gi~igs~~~~~~~~~i~ni~i~n~~~~~~~------~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
.+.-.+-+|.. ...|+||++.... .+-.|-.... ....-..+.|.|+++...
T Consensus 198 ~GtvDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~g~ITA~~~-~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 198 SGHVDFIFGSG----------ITVFDNCNIVARDRSDIEPPYGYITAPST-LTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp EESEEEEEESS----------EEEEESCEEEECCCSSCSSCCEEEEEECC-CTTCSCCEEEESCEEEEC
T ss_pred EcCCCEECCcc----------eEEEEeeEEEEeccCcccCCccEEEeCCc-CCCCCcEEEEEeeEEecC
Confidence 98778888753 5779999997531 1223433221 222224488999999864
No 81
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=93.12 E-value=1.6 Score=41.08 Aligned_cols=206 Identities=15% Similarity=0.286 Sum_probs=121.6
Q ss_pred cHHHHHHHHHHHhhcCCCc---EEEEcCcEEEeccccccCcccCccEEEEEcC---EEEeeccccccCCCcceEEEecee
Q 045402 46 STEAFAKAWAAACASNEST---IIYVPKGRYLLGSVAFKGECQSSDITFQIDG---TLVAPADYRVLGQADNWLSFEGVS 119 (396)
Q Consensus 46 dt~aiq~Ai~~a~~~~~g~---~v~~p~G~Y~~~~i~l~~~~~s~~v~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~~ 119 (396)
+-..||+||+++ +.+. +|+|++|+|.. .+.++ |+ +++|.++| ++.-..+..
T Consensus 17 ~f~TIq~Ai~aa---p~~~~~~~I~I~~G~Y~E-~V~I~---k~-~Itl~G~g~~~tiI~~~~~~--------------- 73 (342)
T 2nsp_A 17 TFKTIADAIASA---PAGSTPFVILIKNGVYNE-RLTIT---RN-NLHLKGESRNGAVIAAATAA--------------- 73 (342)
T ss_dssp CBSSHHHHHHTS---CSSSSCEEEEECSEEEEC-CEEEC---ST-TEEEEESCTTTEEEEECCCT---------------
T ss_pred CcchHHHHHHhc---ccCCCcEEEEEeCCEEEE-EEEEe---cC-eEEEEecCCCCeEEEecccc---------------
Confidence 445599999876 3344 99999999975 35554 24 79998876 221111100
Q ss_pred ceEEeceeEeCCCCcccccccccCCCCCCCceeEEEEeecceEEeceEEecCCc------------------c--eEEE-
Q 045402 120 GVSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQM------------------Y--HIVI- 178 (396)
Q Consensus 120 nv~I~GG~idg~g~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~------------------~--~i~~- 178 (396)
++....|.. +... ....+.+ .+++++++|++|.|... . ++.+
T Consensus 74 ------~~~~~~g~~-~gT~---------~satv~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~ 136 (342)
T 2nsp_A 74 ------GTLKSDGSK-WGTA---------GSSTITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVT 136 (342)
T ss_dssp ------TCBCTTSCB-CHHH---------HTCSEEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEEC
T ss_pred ------cccccccCc-cccc---------ceeEEEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEe
Confidence 011101100 0000 0112333 48899999999998641 1 3432
Q ss_pred eceecEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEecCCceEEecCCCeeEEEEeeeecCC--------c--eEE
Q 045402 179 NRCQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVTCGPG--------H--GIS 248 (396)
Q Consensus 179 ~~~~nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~~~~~s~ni~i~n~~~~~~--------~--gi~ 248 (396)
..++++.+.+|++.. ..|.+.... .+..+++|.|...=|-| ++. ....++||++..- . |.-
T Consensus 137 v~~d~~~f~~c~f~G-----~QDTLy~~~-gr~~~~~c~I~G~vDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~~~g~I 207 (342)
T 2nsp_A 137 KSGDRAYFKDVSLVG-----YQATLYVSG-GRSFFSDCRISGTVDFI-FGD--GTALFNNCDLVSRYRADVKSGNVSGYL 207 (342)
T ss_dssp TTCBSEEEEEEEEEC-----STTCEEECS-SEEEEESCEEEESEEEE-EES--SEEEEESCEEEECCCTTSCTTSCCEEE
T ss_pred eccCcEEEEeeEEec-----ccceEEECC-CCEEEEcCEEEeceEEE-eCC--ceEEEecCEEEEecCcccccccCceEE
Confidence 478999999999998 457777765 56899999999865533 333 3589999988521 1 321
Q ss_pred EEeccccCCCCCEEEEEEEeeEEecCC-----eEEEEE-eecCCCC----c------eEEeEEEEeEEEecC
Q 045402 249 IGSLGKDMDEEGVQNVTVWKTVFTGTQ-----NGLRIK-SWARPSN----G------FVKGVRFIDAVMQNV 304 (396)
Q Consensus 249 igs~~~~~~~~~i~ni~i~n~~~~~~~-----~gi~i~-~~~~~~~----g------~v~nI~~~ni~~~~~ 304 (396)
. ..+. +...-..+.|.||++.... ...++. .| ++.. + .+..+.|.+..|.+.
T Consensus 208 t-A~~~--~~~~~~G~vf~~c~i~~~~~~~~~~~~yLGRpW-~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~ 275 (342)
T 2nsp_A 208 T-APST--NINQKYGLVITNSRVIRESDSVPAKSYGLGRPW-HPTTTFSDGRYADPNAIGQTVFLNTSMDNH 275 (342)
T ss_dssp E-EECC--BTTCSCCEEEESCEEEESSTTSCTTCEEEECCC-CCEEEETTEEEECTTBCCEEEEESCEECTT
T ss_pred E-ccCC--CCCCCCEEEEEcCEEecCCCCCccccEEEEecc-ccccccccccccCCccceeEEEEccccCcc
Confidence 1 1111 1123345889999998652 134554 23 2111 0 122788999998875
No 82
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=90.85 E-value=1.7 Score=40.08 Aligned_cols=128 Identities=18% Similarity=0.149 Sum_probs=75.0
Q ss_pred cEEEEeEEEEcCCCCCCCCceeeecceeEEEEccEEec-CCceEEecCCCeeEEEEeeeecCC-------ce--EEEEec
Q 045402 183 DVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKT-GDDCISIGRGTNNLWIERVTCGPG-------HG--ISIGSL 252 (396)
Q Consensus 183 nv~I~~~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~~~~~s~ni~i~n~~~~~~-------~g--i~igs~ 252 (396)
..+++|+.|-. +..||||... -+.+|+|+.+.. +.|++.++. ..++|.+.-..+. .. |.. .
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA~~a~~g~~g~~DKV~Q~--N 229 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG--KTMTIVGGIAHNAKDGYGGKPDKVLQH--N 229 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS--SEEEEESCEEEECTTCTTSSCCEEEEE--C
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC--ceEEEECchhccccccccCCCCcEEEe--C
Confidence 46888888854 3679999973 369999999987 899999995 3566665543322 11 221 1
Q ss_pred cccCCCCCEEEEEEEe--eEEecCCeEEEEEeecC-CCCceEEeEEEEeEEEecCC-ccEEEEeecCCCCCCCCCCCcce
Q 045402 253 GKDMDEEGVQNVTVWK--TVFTGTQNGLRIKSWAR-PSNGFVKGVRFIDAVMQNVQ-NPIIIDQNYCPHNLNCPGQVSGV 328 (396)
Q Consensus 253 ~~~~~~~~i~ni~i~n--~~~~~~~~gi~i~~~~~-~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~ 328 (396)
.--.++|.| -+... ..|=..++... ...+.=|+|.++|+++.... .-+-|+.+|.+ ..
T Consensus 230 -------g~gtv~I~~~~F~~~~-~~GKl~RSCGnC~~~~~~R~v~i~nv~~~g~~~~lvGiN~NyGD----------ta 291 (344)
T 3b4n_A 230 -------SKNSTTVVKGNFTLTG-EHGKLWRSCGDCSNNGGPRFLTVTSATVNGTIDSIAGVNRNYGD----------VA 291 (344)
T ss_dssp -------CSSEEEEEETTEEEEE-EEEEEEEECSSCTTCCCCEEEEESSEEEEEEEEEEEEEEGGGTC----------EE
T ss_pred -------CCccEEEecCceEEEc-cCCeEeEccCCcccCCcceEEEEeceEEeCCceEEEEEeCCCCC----------EE
Confidence 111455554 22211 23433444321 12335688999999885543 33456666654 34
Q ss_pred EEEeEEEEe
Q 045402 329 KISDIIYWN 337 (396)
Q Consensus 329 ~i~ni~~~n 337 (396)
.|+|+++++
T Consensus 292 ti~n~~i~~ 300 (344)
T 3b4n_A 292 TISGLKIKN 300 (344)
T ss_dssp EECSEEETT
T ss_pred EEEEEEEec
Confidence 566665554
No 83
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.41 E-value=0.24 Score=47.24 Aligned_cols=39 Identities=31% Similarity=0.340 Sum_probs=27.9
Q ss_pred ccccCCCCcccHHHHHHHHHHHhhcCCCcEEEEcCc-EEEeccc
Q 045402 36 FGAKGNGVIDSTEAFAKAWAAACASNESTIIYVPKG-RYLLGSV 78 (396)
Q Consensus 36 ~Ga~~dg~tddt~aiq~Ai~~a~~~~~g~~v~~p~G-~Y~~~~i 78 (396)
=||+|||++|||+|+..||.++ + ++.++=-.| ||.+..|
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~---~-~~~~IDG~G~T~kVs~l 43 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT---P-VGQKINGNGKTYKVTSL 43 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS---C-TTSCEECTTCEEECSSC
T ss_pred CcccCCCccCcHHHHHHHhccC---C-CCeEEeCCCceEEeeeC
Confidence 4899999999999999999754 3 333334444 6766543
No 84
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=79.98 E-value=14 Score=34.43 Aligned_cols=81 Identities=21% Similarity=0.248 Sum_probs=52.2
Q ss_pred ceeEEEEccEEec-CCceEEecCC-----------------------CeeEEEEeeeecCCceEEEEeccccCCCCCEEE
Q 045402 208 SRNVKIRSSSIKT-GDDCISIGRG-----------------------TNNLWIERVTCGPGHGISIGSLGKDMDEEGVQN 263 (396)
Q Consensus 208 s~nv~I~n~~i~~-~dD~i~~~~~-----------------------s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~n 263 (396)
+-|...++..... -.||+.+++. -.|-+|.|..+.++-|+.+|..|+ ..++.|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 3566777766655 4788888763 247788888877776766665543 346777
Q ss_pred EEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 264 VTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 264 i~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
|+++|| ...|..+.++. -+|.||++.++
T Consensus 346 itv~DC----AGsG~~~~t~~---------~~FtNi~vID~ 373 (559)
T 2vfm_A 346 ITVEDC----AGSGAYLLTHE---------SVFTNIAIIDT 373 (559)
T ss_dssp EEEESC----SSEEEEEEEES---------CEEEEEEEESC
T ss_pred eEehhc----cCcceEEeecc---------ceeeeeEEEec
Confidence 777777 34566665542 35777777654
No 85
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=79.44 E-value=13 Score=34.46 Aligned_cols=82 Identities=21% Similarity=0.287 Sum_probs=53.5
Q ss_pred ceeEEEEccEEec-CCceEEecCC-----------------------CeeEEEEeeeecCCceEEEEeccccCCCCCEEE
Q 045402 208 SRNVKIRSSSIKT-GDDCISIGRG-----------------------TNNLWIERVTCGPGHGISIGSLGKDMDEEGVQN 263 (396)
Q Consensus 208 s~nv~I~n~~i~~-~dD~i~~~~~-----------------------s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~n 263 (396)
+-|...+++.... -.||+.+++. -.|-+|.|..+.++-|+.+|..|+ ...+.|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGS---GGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 3567777776655 4788888763 247788888887776777765543 346777
Q ss_pred EEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCC
Q 045402 264 VTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQ 305 (396)
Q Consensus 264 i~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~ 305 (396)
|+++|| ...|..+.++. -+|.||++.++.
T Consensus 349 itv~DC----AGsG~~~~t~~---------~~FtNi~vID~N 377 (559)
T 2v5i_A 349 VTVQDC----AGAGMLAHTYN---------RVFSNITVIDCN 377 (559)
T ss_dssp EEEESC----SSEEEEEEEES---------CEEEEEEEESCC
T ss_pred eEehhc----cCcceEEeecc---------ceeeeeEEEecc
Confidence 777777 34566665542 357777776543
No 86
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=75.54 E-value=50 Score=31.66 Aligned_cols=18 Identities=17% Similarity=0.239 Sum_probs=12.6
Q ss_pred EEEeecceEEeceEEecC
Q 045402 154 SITNSNNVSIKGLLSLNS 171 (396)
Q Consensus 154 ~~~~~~nv~i~~v~i~~~ 171 (396)
.....+++..+|++|.|.
T Consensus 196 ~~V~g~~F~a~niTf~Nt 213 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENT 213 (422)
T ss_dssp EEECCTTCEEEEEEEEET
T ss_pred EEEECCCEEEEeeEEEeC
Confidence 344567788888888775
No 87
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=75.27 E-value=20 Score=34.68 Aligned_cols=81 Identities=21% Similarity=0.248 Sum_probs=52.7
Q ss_pred ceeEEEEccEEec-CCceEEecCC-----------------------CeeEEEEeeeecCCceEEEEeccccCCCCCEEE
Q 045402 208 SRNVKIRSSSIKT-GDDCISIGRG-----------------------TNNLWIERVTCGPGHGISIGSLGKDMDEEGVQN 263 (396)
Q Consensus 208 s~nv~I~n~~i~~-~dD~i~~~~~-----------------------s~ni~i~n~~~~~~~gi~igs~~~~~~~~~i~n 263 (396)
+-|...+++.... -.||+.+++. -.|-+|.|..+.++-|+.+|..|. ...+.|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg~---g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 4566777766655 4788888763 247788888877776776665543 346777
Q ss_pred EEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecC
Q 045402 264 VTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNV 304 (396)
Q Consensus 264 i~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~ 304 (396)
|+++|| ...|..+.++. -+|.||++.++
T Consensus 453 itv~dc----ag~g~~~~~~~---------~~ftni~vid~ 480 (666)
T 2xc1_A 453 ITVEDC----AGSGAYLLTHE---------SVFTNIAIIDT 480 (666)
T ss_dssp EEEESC----SSEEEEEEEES---------CEEEEEEEESC
T ss_pred eEehhc----cCcceEEeecc---------ceeeeeEEEec
Confidence 777777 34566665542 35677777654
No 88
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=69.59 E-value=18 Score=34.30 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=8.2
Q ss_pred eeEEEEeecceEEec
Q 045402 151 TTLSITNSNNVSIKG 165 (396)
Q Consensus 151 ~~i~~~~~~nv~i~~ 165 (396)
..+.+..|.+|.+++
T Consensus 146 stL~I~~~~gv~v~~ 160 (543)
T 3riq_A 146 ATLRVNSANNIIFTH 160 (543)
T ss_dssp EEEEEESCEEEEEES
T ss_pred eEEEEeccCceEEec
Confidence 345556665555553
No 89
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=57.84 E-value=38 Score=30.89 Aligned_cols=44 Identities=23% Similarity=0.244 Sum_probs=24.2
Q ss_pred EEEEEEEeeEEecCCeEEEEEeecCCCCceEEeEEEEeEEEecCCc-cEEE
Q 045402 261 VQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAVMQNVQN-PIII 310 (396)
Q Consensus 261 i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~nI~~~ni~~~~~~~-~i~i 310 (396)
..+++++.+.-.++.+|-.+.-..+ ++|+++|+.+.+++. ++.+
T Consensus 141 ls~~ti~~nk~~ds~qg~qvs~~gg------~dvsv~~i~fsn~~g~gfsl 185 (542)
T 2x3h_A 141 LSNITVESNKATDTTQGQQVSLAGG------SDVTVSDVNFSNVKGTGFSL 185 (542)
T ss_dssp EEEEEEECCCSSTTCBCCSEEEESC------EEEEEEEEEEEEECSBEEEE
T ss_pred eeeEEEecccCCccccceEEEecCC------CcceEeeeeeeecCCCceeE
Confidence 4555555555555545544432222 567777777777663 3443
No 90
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=49.80 E-value=1.1e+02 Score=28.35 Aligned_cols=69 Identities=13% Similarity=0.030 Sum_probs=40.8
Q ss_pred CeeEEEEeeeecC-C-ceEEEEecc---------------ccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEe
Q 045402 231 TNNLWIERVTCGP-G-HGISIGSLG---------------KDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKG 293 (396)
Q Consensus 231 s~ni~i~n~~~~~-~-~gi~igs~~---------------~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~n 293 (396)
..|..+++...-. - +|+-+|+.. +|+-.+-..|=.|.|..+.++ -|+.+... + .+++|+|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 4689999987543 3 378887641 111112234666778777775 34444332 2 4678888
Q ss_pred EEEEeEEEe
Q 045402 294 VRFIDAVMQ 302 (396)
Q Consensus 294 I~~~ni~~~ 302 (396)
|+++++...
T Consensus 346 itv~DCAGs 354 (559)
T 2vfm_A 346 ITVEDCAGS 354 (559)
T ss_dssp EEEESCSSE
T ss_pred eEehhccCc
Confidence 887776443
No 91
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=38.10 E-value=1.9e+02 Score=28.11 Aligned_cols=69 Identities=13% Similarity=0.030 Sum_probs=40.8
Q ss_pred CeeEEEEeeeecC-C-ceEEEEecc---------------ccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEe
Q 045402 231 TNNLWIERVTCGP-G-HGISIGSLG---------------KDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKG 293 (396)
Q Consensus 231 s~ni~i~n~~~~~-~-~gi~igs~~---------------~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~n 293 (396)
..|..+++...-. - +|+-+|+.. +|.-.+-..|=.|.|..+.++ -|+.+... + .+++|+|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g-~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 4689999987543 3 478887641 111112234666778777775 34444432 2 4678888
Q ss_pred EEEEeEEEe
Q 045402 294 VRFIDAVMQ 302 (396)
Q Consensus 294 I~~~ni~~~ 302 (396)
|+++++...
T Consensus 453 itv~dcag~ 461 (666)
T 2xc1_A 453 ITVEDCAGS 461 (666)
T ss_dssp EEEESCSSE
T ss_pred eEehhccCc
Confidence 888776543
No 92
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.52 E-value=41 Score=28.11 Aligned_cols=11 Identities=0% Similarity=0.271 Sum_probs=5.9
Q ss_pred EEEEeecceEE
Q 045402 153 LSITNSNNVSI 163 (396)
Q Consensus 153 i~~~~~~nv~i 163 (396)
+.+.+|++++|
T Consensus 71 v~i~~C~~~~i 81 (179)
T 2yuh_A 71 VFLEDCSDCVL 81 (179)
T ss_dssp EEEESCBSCEE
T ss_pred EEEEeCCceEE
Confidence 45555555544
No 93
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=26.16 E-value=1.6e+02 Score=27.32 Aligned_cols=69 Identities=19% Similarity=0.108 Sum_probs=41.2
Q ss_pred CeeEEEEeeeecC-C-ceEEEEecc---------------ccCCCCCEEEEEEEeeEEecCCeEEEEEeecCCCCceEEe
Q 045402 231 TNNLWIERVTCGP-G-HGISIGSLG---------------KDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKG 293 (396)
Q Consensus 231 s~ni~i~n~~~~~-~-~gi~igs~~---------------~~~~~~~i~ni~i~n~~~~~~~~gi~i~~~~~~~~g~v~n 293 (396)
..|..+++...-. - +|+-+|+.. +|+-.+-..|=.|.|..+.++ -|+.+... + .+++|+|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-G-SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 4689999987543 3 378877641 111112234666778877775 34444433 2 4688888
Q ss_pred EEEEeEEEe
Q 045402 294 VRFIDAVMQ 302 (396)
Q Consensus 294 I~~~ni~~~ 302 (396)
|+++++...
T Consensus 349 itv~DCAGs 357 (559)
T 2v5i_A 349 VTVQDCAGA 357 (559)
T ss_dssp EEEESCSSE
T ss_pred eEehhccCc
Confidence 888877544
No 94
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=25.07 E-value=46 Score=30.98 Aligned_cols=56 Identities=23% Similarity=0.129 Sum_probs=18.1
Q ss_pred ChhhHHHHHHHHH-HhhhhcCCCCCCCCCeeeEEeeccccCCCCcccHHHHHHHHHH
Q 045402 1 MAKFLISLIFSIF-LFTVSNNLNPSAATSSVYNVLRFGAKGNGVIDSTEAFAKAWAA 56 (396)
Q Consensus 1 m~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~d~Ga~~dg~tddt~aiq~Ai~~ 56 (396)
|++.+..|.+.++ ++.+++|.+......+..-+.-=|+.+.--...-+||++|++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~ 57 (356)
T 1ydy_A 1 MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQ 57 (356)
T ss_dssp ----------------------------CCCEEEETTTTTTTSSTTCHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHhhhhhhhccccCCCceEEEeCCCCCCCCcchHHHHHHHHHc
Confidence 7755444444333 2334445444433334444555566655445556999999963
No 95
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=23.45 E-value=27 Score=30.21 Aligned_cols=11 Identities=27% Similarity=0.247 Sum_probs=4.3
Q ss_pred CCCCCCeeeEE
Q 045402 23 PSAATSSVYNV 33 (396)
Q Consensus 23 ~~~~~~~~~~v 33 (396)
.+.+.++.+.|
T Consensus 23 ~~~~~~~~l~v 33 (259)
T 4dz1_A 23 DSIVEGRTLNV 33 (259)
T ss_dssp --CCTTCEEEE
T ss_pred CccccCCeEEE
Confidence 33344455555
No 96
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=22.58 E-value=1.7e+02 Score=27.24 Aligned_cols=9 Identities=22% Similarity=0.516 Sum_probs=3.7
Q ss_pred EEEEeecce
Q 045402 153 LSITNSNNV 161 (396)
Q Consensus 153 i~~~~~~nv 161 (396)
+.+.+|+|.
T Consensus 83 l~I~~c~nC 91 (352)
T 3bh7_B 83 VTIDDCTNC 91 (352)
T ss_dssp EEEESCBSC
T ss_pred EEEecCCCC
Confidence 344444443
Done!