BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045403
(144 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/122 (78%), Positives = 110/122 (90%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISAFCR G +EAKQLARDFEA YDKYD+V+LN+MLCAYCR G+MESV+ +MRK+DELA
Sbjct: 387 MISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELA 446
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+NTFHILIKYF KEK+Y+LAYRTM DMH KGHQPEEELCSSLI HLGK+RAHS+A
Sbjct: 447 ISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKIRAHSQAF 506
Query: 121 CL 122
+
Sbjct: 507 SV 508
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/122 (77%), Positives = 111/122 (90%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS+FCRGG FEEAK+LA +FEAKYDKYDVV+LN++LCAYCRTG+ ESV+ MRK+DELA
Sbjct: 290 MISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELA 349
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYF KEK+YMLAY+TM DMH+KGHQP EELCSSLI HLGK++AH+EA
Sbjct: 350 ISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLILHLGKIKAHAEAF 409
Query: 121 CL 122
+
Sbjct: 410 SV 411
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/122 (77%), Positives = 110/122 (90%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS+FCRGG FEEAK+LA +FEAKYDKYDV + N++LCAYCR G+MESV+ MRK+DELA
Sbjct: 172 MISSFCRGGLFEEAKELAEEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELA 231
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYF KEK+YMLAY+TM DMH+KGHQP EELCSSL+FHLGK++AHSEA
Sbjct: 232 ISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPAEELCSSLLFHLGKIKAHSEAF 291
Query: 121 CL 122
+
Sbjct: 292 SV 293
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 110/125 (88%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISAFCRGG EEAK LA+DFEA YD+YD+V+LN+MLCAYCR G+MESV+ ++RK+D+LA
Sbjct: 389 MISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLA 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYF KEK+Y+L YRT+ DMH+KGHQPEEELCSSLI LG +RA+SEA
Sbjct: 449 ISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLILSLGNIRAYSEAF 508
Query: 121 CLQHV 125
+ ++
Sbjct: 509 SVYNI 513
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/122 (75%), Positives = 108/122 (88%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA+CRG EEAKQLA++FEAKYDKYDVV+LN+MLCAYCR GDMESV+ MRK+DELA
Sbjct: 398 MISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKMDELA 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP Y TFHILIKYF K+K+Y+LAY+TM DMH+KGHQPEEELCS LIFHLGK +A++EA
Sbjct: 458 ISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHLGKAKAYTEAF 517
Query: 121 CL 122
+
Sbjct: 518 SV 519
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 104/122 (85%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISAFCR F+EAKQLA+DF+ +DKYDVV++NSMLCA+CR G+MESV+ +RK+DELA
Sbjct: 355 IISAFCRAKLFQEAKQLAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELA 414
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTF+ILIKYF ++ MY+LAYRT +DMH KG+QP EELCSSLI+HLG+ A SEA
Sbjct: 415 ISPDYNTFNILIKYFCRKNMYLLAYRTTMDMHSKGYQPAEELCSSLIYHLGQENASSEAF 474
Query: 121 CL 122
L
Sbjct: 475 SL 476
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+ G F +A L +D E++ + V+L ++L Y R G E ++ KL+ L
Sbjct: 250 LLNAYSACGDFTKADALIQDMESEGLAPNKVILTTLLKVYVRGGLFEKSRELLAKLESLG 309
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + +L+ K + A + + D K H + S+I + A A
Sbjct: 310 YAEDEMPYCVLMDGLAKARQTHEA-KIIFDEMMKKHVMSDGYAHSII-----ISAFCRAK 363
Query: 121 CLQHVKDIAKD 131
Q K +AKD
Sbjct: 364 LFQEAKQLAKD 374
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 102/122 (83%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISAFCR F EAKQLA+DFE +KYD+V+LNSMLCA+CR G+ME V+ ++K+DELA
Sbjct: 357 MISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDELA 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P YNTFHILIKYF +EKMY+LAYRTM DMH KGHQP EELCSSLI HLG++ A+SEA
Sbjct: 417 INPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHLGQVNAYSEAF 476
Query: 121 CL 122
+
Sbjct: 477 SV 478
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/122 (66%), Positives = 104/122 (85%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA CR F+EAK+L+RD E Y+K D+V+LN+MLCAYCR G+MESV+ +M+K+DE A
Sbjct: 383 MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EEELCSSLI+HLGK+RA +EA
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAF 502
Query: 121 CL 122
+
Sbjct: 503 SV 504
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 103/122 (84%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA CR FEEAK+L+RD E Y+K D+V+LN+MLCAYCR G+MESV+ +M+K+DE A
Sbjct: 384 MISALCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EEELCSSLI+HLGK+RA SEA
Sbjct: 444 IIPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAPSEAF 503
Query: 121 CL 122
+
Sbjct: 504 SV 505
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 85/100 (85%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA CR F+EAK+L+RD E Y+K D+V+LN+MLCAYCR G+MESV+ +M+K+DE A
Sbjct: 383 MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+SPDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EE
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEE 482
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 88/122 (72%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA RGG EE+KQLA++FE++ YD+V+LN+ L YC T DMESV+ +++K+DEL
Sbjct: 366 MISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDELN 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YF K+Y LAY+T+ DMH KGHQ EELCS ++ LGK SEA
Sbjct: 426 ISPDNITFNTLIRYFCNSKVYHLAYKTVEDMHTKGHQLNEELCSHVMVQLGKGGFPSEAF 485
Query: 121 CL 122
L
Sbjct: 486 SL 487
>gi|57899342|dbj|BAD87953.1| putative PPR protein [Oryza sativa Japonica Group]
Length = 650
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 88/122 (72%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA RGG EE+KQLA++FEAK YD+V+LN+ L AYC T DMESV+ ++RK+DE
Sbjct: 374 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YF K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 434 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 493
Query: 121 CL 122
+
Sbjct: 494 SV 495
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+ +E+A L +D + + V+L ++L Y + G E ++ +L+
Sbjct: 269 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM +KG + + S +I H G R S+
Sbjct: 329 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 388
Query: 119 ALC 121
L
Sbjct: 389 QLA 391
>gi|218188463|gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indica Group]
Length = 647
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 88/122 (72%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA RGG EE+KQLA++FEAK YD+V+LN+ L AYC T DMESV+ ++RK+DE
Sbjct: 371 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YF K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 431 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 490
Query: 121 CL 122
+
Sbjct: 491 SV 492
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+ +E+A L +D + + V+L ++L Y + G E ++ +L+
Sbjct: 266 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM +KG + + S +I H G R S+
Sbjct: 326 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 385
Query: 119 ALC 121
L
Sbjct: 386 QLA 388
>gi|222618680|gb|EEE54812.1| hypothetical protein OsJ_02231 [Oryza sativa Japonica Group]
Length = 637
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 88/122 (72%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA RGG EE+KQLA++FEAK YD+V+LN+ L AYC T DMESV+ ++RK+DE
Sbjct: 361 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 420
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YF K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 421 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 480
Query: 121 CL 122
+
Sbjct: 481 SV 482
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+ +E+A L +D + + V+L ++L Y + G E ++ +L+
Sbjct: 256 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 315
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM +KG + + S +I H G R S+
Sbjct: 316 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 375
Query: 119 ALC 121
L
Sbjct: 376 QLA 378
>gi|357135236|ref|XP_003569217.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Brachypodium distachyon]
Length = 644
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 92/130 (70%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA R G EEAKQLA++FE + YD+V+LN+ L AYC T D ESV+ +++K+DEL
Sbjct: 365 MISALHRAGYREEAKQLAKEFEDQNTTYDLVILNTSLRAYCNTNDTESVMRMLKKMDELN 424
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ TF+ LI+YF K K+Y L Y+T+ DMH KGHQ EELCS ++ LG+ SEAL
Sbjct: 425 ISPDHITFNTLIRYFCKGKVYHLVYKTIEDMHTKGHQLNEELCSEVMLQLGEAGFPSEAL 484
Query: 121 CLQHVKDIAK 130
+ ++ +K
Sbjct: 485 SVYNMMRYSK 494
>gi|297597021|ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group]
gi|255673364|dbj|BAF05257.2| Os01g0559500 [Oryza sativa Japonica Group]
Length = 690
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 88/122 (72%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA RGG EE+KQLA++FEAK YD+V+LN+ L AYC T DMESV+ ++RK+DE
Sbjct: 374 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YF K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 434 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 493
Query: 121 CL 122
+
Sbjct: 494 SV 495
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+ +E+A L +D + + V+L ++L Y + G E ++ +L+
Sbjct: 269 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM +KG + + S +I H G R S+
Sbjct: 329 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 388
Query: 119 AL 120
L
Sbjct: 389 QL 390
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 86/122 (70%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA RGG +E+KQLA++FE++ YD+V+LN+ L YC T DMESV+ +++K+DE
Sbjct: 366 MISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDESN 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YF K+ LAY+T+ DMH KGHQ EELCS ++ LGK SEA
Sbjct: 426 ISPDNITFNTLIRYFCNAKVCHLAYKTVEDMHAKGHQLNEELCSHVMVQLGKAGFPSEAF 485
Query: 121 CL 122
+
Sbjct: 486 SV 487
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFE-AKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+ISA+ + G + +L E + + D++L N++L YC G M+ V V++K+D
Sbjct: 495 LISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKMDAE 554
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAH 116
D TF+ILI YF KE + LA +T+ DM +GH+P E ++L GKM
Sbjct: 555 GCGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGKMEEM 614
Query: 117 SEAL 120
EAL
Sbjct: 615 FEAL 618
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G +EA++L R+ EAK K DVV +++L AYC+ GD S + +++ E
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ +EK A+ +M G QP+E +SLI
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AFCR G + A++L K ++V NS++ C+ G ME V ++ +
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +++ L+ + K A +M +KG P+ +SLI
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLI 304
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G ++A R+ + VV N+++ YC G M+ ++R+++
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ ++ + K A++ M + G P+ SSLI
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C G +EA + RD + V N+++ A+CR G+++ ++ + E
Sbjct: 163 LVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ K A + +M K+G P+ ++L+ K+ EAL
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEAL 282
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ GC EA + + K DVV S++ C+ G++E + ++R++ E
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 61 ISPDYNTFHILIKYFRKEKMY---MLAYRTM 88
+ + TF LI F K+ +LA R M
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E+A+++ + + D V N+++ YC+ G + V ++
Sbjct: 233 VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD TF LI K A + +M ++G Q E ++LI
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI 339
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G +EA++L + EAK K DVV +++L YC+ GD +S + RK+ +
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ +E+ A M + G QP+E ++LI
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLI 477
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S +C+ GC EA + + K DVV S++ A CR G++E + ++ ++ E
Sbjct: 266 LVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERG 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH----LGKM 113
+ + TF LI F + A M +M + QP +C +++ + LG+M
Sbjct: 326 LRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQP-SVVCYNVLINGYCKLGRM 381
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AFCR G + A++L + +V N+++ C+ G ME + ++
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +++ L+ + K A +M +KG P+ +SLI
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLI 302
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A CR G E A L + + + +++ +CR G ++ + M+++ E
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P +++LI + K A + +M KG +P+ S+++
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL 407
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEA-KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++ A C G EEA + D +VV N+++ A+CR G++++ ++ + E
Sbjct: 160 LVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG 219
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P TF+ ++ K A + +M ++G P+ ++L+ K EA
Sbjct: 220 GVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279
Query: 120 LCL 122
L +
Sbjct: 280 LAV 282
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E+A+++ + + D V N+++ YC+ G + + V ++ +
Sbjct: 231 VVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF LI + A + M ++G + E ++LI
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALI 337
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G +A+QL D E++ D V NS+L A+ R G++E V + ++ ++
Sbjct: 367 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIG 426
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK +EA
Sbjct: 427 FGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEA 485
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M RG + + + + E K D+ + NS+L Y D I V +++ E
Sbjct: 924 MARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDG 983
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T++ LI + ++ + M +M G +P+ + SL+ GK + +A
Sbjct: 984 LEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQA 1042
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G + A++L R+ EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ +EK A +M + G QP+E ++LI
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S +C+ GC E+ + + + DVV S++ A C+ G++E + ++ ++ E
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKM 113
+ + TF LI F K+ A + +M K G QP ++LI LG+M
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G ++A + + VV N+++ YC+ G M+ ++R+++
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD T+ +I + K A++ M KKG P+ SSLI L
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++AFCR G + A+++ E K ++V NSM+ C+ G ME V ++
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD +++ L+ + K + +M ++G P+ +SLI K +A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 120 LCL 122
+ L
Sbjct: 313 VAL 315
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ C+ G E A+++ + + DVV N++L YC+ G + + V ++ +
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF LI K A + M ++G + E ++LI
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVIHVMRKLD 57
++ A C G EEA + D + V N+++ A+CR G++ E V+ +MR +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 215
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
E P+ TF+ ++ K A + +M ++G P+
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G + A++L R+ EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ +EK A +M + G QP+E ++LI
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S +C+ GC E+ + + + DVV S++ A C+ G++E + ++ ++ E
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKMRAHS 117
+ + TF LI F K+ A + +M K G QP ++LI LG+M
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 118 EALCLQHVKDIAKD 131
E + K + D
Sbjct: 384 ELIREMEAKRVKPD 397
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G ++A + + VV N+++ YC+ G M+ ++R+++
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD T+ +I + K A++ M KKG P+ SSLI L
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++AFCR G + A+++ E K ++V NSM+ C+ G ME V ++
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD +++ L+ + K + +M ++G P+ +SLI K +A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 120 LCL 122
+ L
Sbjct: 313 VAL 315
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ C+ G E A+++ + + DVV N++L YC+ G + + V ++ +
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF LI K A + M ++G + E ++LI
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVIHVMRKLD 57
++ A C G EEA + D + V N+++ A+CR G++ E V+ +MR +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 215
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
E P+ TF+ ++ K A + +M ++G P+
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G + A++L R+ EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ +EK A +M + G QP+E ++LI
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 333
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S +C+ GC E+ + + + DVV S++ A C+ G++E + ++ ++ E
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKMRAHS 117
+ + TF LI F K+ A + +M K G QP ++LI LG+M
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241
Query: 118 EALCLQHVKDIAKD 131
E + K + D
Sbjct: 242 ELIREMEAKRVKPD 255
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G ++A + + VV N+++ YC+ G M+ ++R+++
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD T+ +I + K A++ M KKG P+ SSLI L
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++AFCR G + A+++ E K ++V NSM+ C+ G ME V ++
Sbjct: 51 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 110
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD +++ L+ + K + +M ++G P+ +SLI K +A
Sbjct: 111 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 170
Query: 120 LCL 122
+ L
Sbjct: 171 VAL 173
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ C+ G E A+++ + + DVV N++L YC+ G + + V ++ +
Sbjct: 87 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF LI K A + M ++G + E ++LI
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 193
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVIHVMRKLD 57
++ A C G EEA + D + V N+++ A+CR G++ E V+ +MR +
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 73
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
E P+ TF+ ++ K A + +M ++G P+
Sbjct: 74 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 115
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G +EA++L + EAK K DVV ++++ AYC+ D S + +++ E
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ +EK A+ +M K G QP+E +SLI
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ GC EA + + K DVV S++ C+ G++E + ++R++ E
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG 320
Query: 61 ISPDYNTFHILIKYFRKEKMY---MLAYRTM 88
+ + TF LI F K+ +LA R M
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G ++A R K VV N+++ YC G M+ ++ +++
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I + K A+ M +KG P+ SSLI
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AF R G + A++L K ++V NSM+ C+ G ME V ++
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +++ L+ + K A +M +KG P+ +SLI
Sbjct: 251 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 297
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ C+ G E+A+++ + + D V N+++ YC+ G + V ++ +
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD TF LI K A + M ++G Q E ++LI
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALI 332
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G +EA + RD +VV N+++ A+ R G+++ ++ + +
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ K A + +M ++G P+ ++L+ K EAL
Sbjct: 216 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEAL 275
Query: 121 CL 122
+
Sbjct: 276 SV 277
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G +EA++L + EAK K DVV ++++ AYC+ D S + +++ E
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ EK A+ +M K G QP+E +SLI
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AF R G + A++L K ++V NSM+ C+ G ME V ++
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +++ L+ + K A +M +KG P+ +SLI
Sbjct: 291 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 337
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ GC EA + + K DVV S++ C+ G++E + ++R++ E
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG 360
Query: 61 ISPDYNTFHILIKYFRKEKMY---MLAYRTM 88
+ + TF LI F K+ +LA R M
Sbjct: 361 LQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G ++A R + K VV N+++ YC G M+ ++ +++
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I + K A+ M +KG P+ SSLI
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ C+ G E+A+++ + + D V N+++ YC+ G + V ++ +
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD TF LI K A + M ++G Q E ++LI
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALI 372
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C G +EA + RD +VV N+++ A+ R G+++ ++ + E
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG 255
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ K A + +M ++G P+ ++L+ K EAL
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315
Query: 121 CL 122
+
Sbjct: 316 SV 317
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A L R + + + V +++ +C+ G ++ + +R + +
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P ++ LI + A + +M KG +P+ S++I
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G EA +L +D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 367 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 426
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 427 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 485
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +G + + + + E K D+ + NS+L Y GD + V + + E
Sbjct: 925 MIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAG 984
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T++ LI + +++ M +M + G +P+ + SLI GK++ +A
Sbjct: 985 LKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQA 1043
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA R EEA ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 332 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 391
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM K G +E +++I GK H A
Sbjct: 392 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451
Query: 121 CL 122
L
Sbjct: 452 QL 453
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D++ N+++ A R ++E + V + PD T++ +I + + M A R
Sbjct: 325 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 384
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRCAMPF 137
D+ KG P+ +SL++ A + + VK+I +D M F
Sbjct: 385 KDLESKGFLPDAVTYNSLLY------AFAREGNVDKVKEICEDMVKMGF 427
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMES--VIHVMRKLDE 58
M+ + R G F + ++L ++ + D+V N+++ A ++G M + I ++ ++
Sbjct: 260 MMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRR 319
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD T++ LI +E A + DM QP+ +++I G+ E
Sbjct: 320 SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSRE 379
Query: 119 A 119
A
Sbjct: 380 A 380
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G EA +L +D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 310 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 369
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 370 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 428
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA R EEA ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 275 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM K G +E +++I GK H A
Sbjct: 335 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 394
Query: 121 CL 122
L
Sbjct: 395 QL 396
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D++ N+++ A R ++E + V + PD T++ +I + + M A R
Sbjct: 268 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 327
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRCAMPF 137
D+ KG P+ +SL++ A + + VK+I +D M F
Sbjct: 328 KDLESKGFLPDAVTYNSLLY------AFAREGNVDKVKEICEDMVKMGF 370
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMES--VIHVMRKLDE 58
M+ + R G F + ++L ++ + D+V N+++ A ++G M + I ++ ++
Sbjct: 203 MMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRR 262
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD T++ LI +E A + DM QP+ +++I G+ E
Sbjct: 263 SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSRE 322
Query: 119 A 119
A
Sbjct: 323 A 323
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G EA +L +D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 335 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 394
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 395 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 453
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +G + + + + E K D+ + NS+L Y GD + V + + E
Sbjct: 893 MIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAG 952
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T++ LI + +++ M +M + G +P+ + SLI GK++ +A
Sbjct: 953 LKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQA 1011
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA R EEA ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM K G +E +++I GK H A
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419
Query: 121 CL 122
L
Sbjct: 420 QL 421
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D++ N+++ A R ++E + V + PD T++ +I + + M A R
Sbjct: 293 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 352
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRCAMPF 137
D+ KG P+ +SL++ A + + VK+I +D M F
Sbjct: 353 KDLESKGFLPDAVTYNSLLY------AFAREGNVDKVKEICEDMVKMGF 395
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMES--VIHVMRKLDE 58
M+ + R G F + ++L ++ + D+V N+++ A ++G M + I ++ ++
Sbjct: 228 MMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRR 287
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD T++ LI +E A + DM QP+ +++I G+ E
Sbjct: 288 SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSRE 347
Query: 119 A 119
A
Sbjct: 348 A 348
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+ R FE+++ + R+ AK K D++ N+++ AYCR G M+ + ++ + ++PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M++ A + M K G +P + +SLI K+ EA
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEA 800
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+ RG +EEA ++ + +A D V N++L Y ++ + V+++++
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+P T++ LI + ++ + A M KKG +P+
Sbjct: 357 FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
EA ++ ++ EA +V NS++ AY R G ++ + + ++ + I PD T+ L+
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
F K A + +M G QP
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPN 430
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + +TG + + V ++
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 61 ISPDYNTFHILIK 73
P+ TF+ LIK
Sbjct: 427 CQPNICTFNALIK 439
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G A L D D+ S++ AY G + V +KL+E
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLI 107
P T+++++ + K M +VD M G P+ ++LI
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLI 298
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+CR G +EA ++ + + DV+ N+ + +Y I V++ + +
Sbjct: 717 VIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNG 776
Query: 61 ISPDYNTFHILIKYF 75
P+ NT++ LI +F
Sbjct: 777 CKPNQNTYNSLIDWF 791
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS C F + + + + E K D+V+LN++L Y TG+ + I V + E
Sbjct: 893 MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 952
Query: 61 ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + FR E+ + L Y +M K+G P+ E L+ GK +
Sbjct: 953 LEPDEDTYNTLIVMYSRNFRPEEGFTLLY----EMGKRGLTPKLESYKILLAASGKAKLW 1008
Query: 117 SEA 119
+A
Sbjct: 1009 EQA 1011
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S R G +EA+ + ++ K + D V NS+L A+ + GD+E V V +L +
Sbjct: 334 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K LA +M G P+ + L+ LGKM SEA
Sbjct: 394 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 452
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKE---KMYML 83
K +V ++++CAY ++G + ++ E + PD + +++ F + + M+
Sbjct: 465 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 524
Query: 84 AYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
YR M+ K G++P++ L L+ L K H E
Sbjct: 525 LYRAMI---KDGYKPDDGLYQVLLAALAKGNEHDE 556
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA +G ++A + + A + D+ N+M+ + R G + + ++L E
Sbjct: 299 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE R ++ K G + + +++I GKM AL
Sbjct: 359 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 418
Query: 121 CL 122
L
Sbjct: 419 GL 420
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS C F + + + + E K D+V+LN++L Y TG+ + I V + E
Sbjct: 733 MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 792
Query: 61 ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + FR E+ + L Y +M K+G P+ E L+ GK +
Sbjct: 793 LEPDEDTYNTLIVMYSRNFRPEEGFTLLY----EMGKRGLTPKLESYKILLAASGKAKLW 848
Query: 117 SEA 119
+A
Sbjct: 849 EQA 851
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S R G +EA+ + ++ K + D V NS+L A+ + GD+E V V +L +
Sbjct: 174 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAG 233
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K LA +M G P+ + L+ LGKM SEA
Sbjct: 234 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 292
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKE---KMYML 83
K +V ++++CAY ++G + ++ E + PD + +++ F + + M+
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 364
Query: 84 AYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
YR M+ K G++P++ L L+ L K H E
Sbjct: 365 LYRAMI---KDGYKPDDGLYQVLLAALAKGNEHDE 396
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EEA QL D + K D+ N+ L AYC G +E ++H++ ++
Sbjct: 503 MIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG 562
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I + K K A + ++++ K G +P + ++LI G+ + S+A+
Sbjct: 563 LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAI 622
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A CR G + A + + E + VV N ++ A CR+G +E + ++ E
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P TF ILI + + + + +M G P E + + LI
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLI 328
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+ R FE ++++ R+ AK + D++ N+++ AYCR G M V+ ++ E +PD
Sbjct: 394 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 453
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M++ A + M K G +P + +S++ K+ EA
Sbjct: 454 IITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEA 508
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/122 (18%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S F + G + A Q+ + + K ++ N+++ + G ++ V +
Sbjct: 110 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 169
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F + M +M + G PE + ++LI + + +A+
Sbjct: 170 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 229
Query: 121 CL 122
+
Sbjct: 230 AV 231
>gi|392578037|gb|EIW71165.1| hypothetical protein TREMEDRAFT_28279 [Tremella mesenterica DSM
1558]
Length = 713
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 20 DFEAKYD---KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFR 76
D AK+D K D++ +N++L + R D++S+ H+ EL++ PD T+ L++
Sbjct: 444 DQAAKHDSAIKCDIITINTVLRHHARMADIDSMTHLFDLASELSLKPDIVTYTTLMQGLL 503
Query: 77 KEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ LA + MH +G +P E +CS LI L K
Sbjct: 504 RAGRVDLASAALTAMHNQGVEPNERMCSLLIADLSK 539
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+ R FE ++++ R+ AK + D++ N+++ AYCR G M V+ ++ E +PD
Sbjct: 666 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 725
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M++ A + M K G +P + +S++ K+ EA
Sbjct: 726 IITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEA 780
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+EA ++ ++ E +V NS++ AY R G +E + + ++ E I PD T+ L
Sbjct: 323 KEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTL 382
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ F K A + +M +G +P
Sbjct: 383 LSGFEKAGKDKAAVQIFEEMRNEGCKPN 410
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ R G E+A +L K K DV ++L + + G ++ + + ++
Sbjct: 347 LISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEG 406
Query: 61 ISPDYNTFHILIK 73
P+ TF+ LIK
Sbjct: 407 CKPNICTFNALIK 419
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +GG A L + DV SM+ A+ G + V +K++E+
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLI 107
P T+++++ + K M +VD M G P+ ++LI
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLI 278
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/122 (18%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S F + G + A Q+ + + K ++ N+++ + G ++ V +
Sbjct: 382 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F + M +M + G PE + ++LI + + +A+
Sbjct: 442 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 501
Query: 121 CL 122
+
Sbjct: 502 AV 503
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR G E+A ++ E + D+ N++ C CR ME ++ + E
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+Y ++ LI KE + A R DM KG +P
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRP 426
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G EA++L RD E K + VV N M+ Y + G + +++++
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+ +A R +M +G +P ++L+ L K EA
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518
Query: 121 CL 122
L
Sbjct: 519 QL 520
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G +EA++LA++ E K D+V N ++ A C+ G+ + ++ ++ E+
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504
Query: 61 ISPDYNTFHILIK-YFRK-EKMYMLAYRTMVDMHKKGHQ 97
++P + T++ LI YFR+ L RT+ M KKG +
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTL--MEKKGRR 541
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G F++A + D +A V+ N+++ YC+ G M +++++
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ILI F +++ A + +M ++G QP +SLI L EAL
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 121 CLQ 123
LQ
Sbjct: 355 GLQ 357
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR AK++ + + + + +VV NS++ C G ++ + + K+ +
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI F K+KM A + D+ K+G P ++LI GK +A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 121 CLQ 123
L+
Sbjct: 425 LLR 427
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ +EA+++ D + +V+ N+++ AY + G M+ + + +
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ P+ +T++ LI F +E A + +M G
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A C+ G F++ K + E D+V N+++ AYCR G +E +M + +
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P T++ +I K+ Y A +++M G P+ ++L+ + SEA
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C G EA +L K K +V N+++ YCR+GD + ++
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD+ +++ LI F +E A+ + M K+G P+
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD 537
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+CR G EEA ++ K K + N+++ C+ G ++ ++ +
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ L+ + + A +M ++G P+ SSLI + R +AL
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Query: 121 CLQHVKDIAK 130
+ +D+ K
Sbjct: 279 V--YFRDMKK 286
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A L + K D+V N+++ +C+ G+ME + +
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ T+ ILI + A+R M +KG +P C+++I
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G +A + AK D + N+++ + R +M+ + K+++
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+++++ F ++ A + M +KG P+ ++LI
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G +A+QL D E++ D V NS L A+ R G++E V + ++ ++
Sbjct: 369 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 429 FGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEA 487
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M CRG + + + + E K D+ + NS+L Y D + +++ E
Sbjct: 926 MAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDG 985
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T++ILI + ++ M +M G +P+ + SL+ GK + +A
Sbjct: 986 LEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQA 1044
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A L + E K K D++ N+++ +C G + ++R + +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ TF +LI F KE A + + +M ++G P +SLI K EA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +++ +L RD + +VV + ++ ++ + G + +++++ +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+P+ T++ LI F KE A + + M KG P+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +F + G EA QL ++ + + + NS++ +C+ +E I ++ +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 61 ISPDYNTFHILIKYF 75
PD TF+ILI +
Sbjct: 399 CDPDIMTFNILINGY 413
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 36/162 (22%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G E AK+L ++ ++ + D+V +L C G++E + + K+++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 61 ISPDYNTFHILIKY------------------FRKEKMYMLAYRTMVD------------ 90
+ D + I+I + K+ AY M+
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 91 -----MHKKGHQPEEELCSSLI-FHLGKMRAHSEALCLQHVK 126
M ++GH P+E + LI HLG A + A ++ +K
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+G C ++A L + DVV N+++ A+C+ GD S + ++ +
Sbjct: 296 LLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I PD TF I IK F + + +A + + M + G P+ +++I HL GK+
Sbjct: 356 IPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAH 415
Query: 118 EALCLQHVKDIAKD 131
C + I+ D
Sbjct: 416 SIFCDMVEQGISPD 429
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G A +L + K DVV + A+ G ++ ++ E+
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD + +I + K +A+ DM ++G P+ ++LI K SEA+
Sbjct: 391 LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450
Query: 121 CLQHVKDIAKDRCAMP 136
H+ + ++R + P
Sbjct: 451 ---HLYEEMQNRGSYP 463
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A + D + DV+ N+++ +C+ + +H+ ++
Sbjct: 401 IIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRG 460
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ ++I +EK +A M KG + + +LI
Sbjct: 461 SYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I AF G F AK+L D + +++ C++G +E + + E I
Sbjct: 367 IKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGI 426
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
SPD +F+ LI F K A +M +G P+E
Sbjct: 427 SPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDE 465
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ C+ F +L D E D+ N L G ++ + V K+ +
Sbjct: 86 ITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGR 145
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD T+ I+I K K + A + DM KG P+ + C +++ L
Sbjct: 146 KPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGL 194
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 1 MISAFCRGGCFEEAKQLARD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++ C G + A +L D ++ K ++ N+++ +CR G ++ + +
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+++ + YF E M A + + M + G +P+ + L+ + K +A
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309
Query: 120 LCLQHVKDIAKDRC 133
L K K C
Sbjct: 310 YLLMTNKMWPKGLC 323
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A++L +D + + D+ + N M+ Y + G + V + + E+ SPD TF+ LI
Sbjct: 804 DAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLI 863
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDR 132
+ + +M A + +M K G+ P ++LI G+++A+ +A + K IA+
Sbjct: 864 MLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELV--FKSIAETG 921
Query: 133 C 133
C
Sbjct: 922 C 922
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G E A + R + + D V NS+L A+ R G +E V + + +
Sbjct: 237 MISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR 296
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S D T++ +I + K M+ A V M ++G P+ + LI LGK +EA
Sbjct: 297 CSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAA 356
Query: 121 CL 122
+
Sbjct: 357 AM 358
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA+ G FE A + + A + + N +L A+ R G + + ++L E+
Sbjct: 687 LLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMG 746
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ TF ++ F + A M + G P ++ +L+ + +A
Sbjct: 747 ISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAE 806
Query: 121 CLQHVKDIAK 130
L VKDI K
Sbjct: 807 EL--VKDIKK 814
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYM-LAYRTM 88
V + NS++ Y R GD SV ++ ++ + PD TF+I+IK + M LA +
Sbjct: 125 VQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLL 184
Query: 89 VDMHKKGHQPEEELCSSLI 107
D++ G +P+ ++LI
Sbjct: 185 QDVYAAGLRPDTITYNTLI 203
Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 48/119 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R +EA+ L R+ + ++ +++ AY R E V + + E
Sbjct: 862 LIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG 921
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD ++++I +RK + + M G +P L+ GK A +A
Sbjct: 922 CKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKA 980
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G +A+QL ++ E+K D V NS+L A+ R G+++ V + ++ ++
Sbjct: 323 MISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMG 382
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ + LA + DM G P+ + LI LGK EA
Sbjct: 383 FIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEA 441
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+G + + + + E + D+ + NSML Y D + + +++ E
Sbjct: 881 MIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDG 940
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+ PD +T++ LI + ++ M +M + G +P+ + SLI GK +
Sbjct: 941 LQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQ 994
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA R EEA ++ D EA Y + D+ N+M+ Y R G + ++L+
Sbjct: 288 LISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKG 347
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E +M + G +E +++I GK H AL
Sbjct: 348 YFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLAL 407
Query: 121 CL 122
L
Sbjct: 408 QL 409
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+ ++ ++ +Y +G + V+ L E+ +S + +I + K K Y + + +V
Sbjct: 1050 IATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLV 1109
Query: 90 DMHKKGHQPEEELCSSLIFHLG-KMRAHSEALCLQHVKDIAKD 131
+M K+G +P+ + + I H L LQ ++D D
Sbjct: 1110 EMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQDSGFD 1152
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ G E AK++ R + DV LNSML A C+ G+ E I + + L
Sbjct: 253 LVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLG 312
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ I+I KE A+R + + GH+P L + +I L + +A
Sbjct: 313 VSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAF 372
Query: 121 C 121
C
Sbjct: 373 C 373
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G +E +L + K + DVV+ N+++ ++C GDME +M ++++
Sbjct: 330 LIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKR 389
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSS 105
I PD T++ LI+ F A + +M K+G QP+ LC +
Sbjct: 390 IPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCKN 434
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G + A Q D + V N ++ A G V+ ++
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+SPD T++ILI + KE A +M +KG + +SLI+ +
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSR 336
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA C+ G F+EAK+ + K D V+ ++ + YC+ G I V+R +++
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P T+++LI+ F ++ + M +M +KG P +SLI
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLI 626
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G +A+++ + DVV S+L AYC G++ + ++ ++ +
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ T+++L++ + A R + M +KG+ + C+ +I
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIII 463
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL- 59
+++ FC+ G EEA++L + +VV NS + A C+ G + + + + E
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDW 272
Query: 60 ---AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
PD TF +++ F + ++ R +VD+ + G
Sbjct: 273 QHGLPRPDQVTFDVMLSGF-CDAGFVDEARVLVDIMRCG 310
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA++L ++ + + + D + N+++ Y + GD+ + ++ +
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P T++ LI+ K + LA + +M KG P++ SLI +GK+ SEA
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G + A L ++ + + D V N+++ CR G +E +++++
Sbjct: 487 LIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ +++ LI + K A+ +M G P ++LI + L
Sbjct: 547 IRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI----------QGL 596
Query: 121 CLQHVKDIAKD 131
C D+A++
Sbjct: 597 CKNQQGDLAEE 607
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+GG EEA + + V N+++ YC GD+ ++ A
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I P +T+++LI E A + DM G P+
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ G ++AK E K +VV N+++ YC G +E V+ +
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI K A + M + G P ++LI
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 52/95 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+++ N+++ +C G+++ +++++D+ I PD T++ L++ +E A +
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQ 123
+M ++G +P+ ++LI K ++A ++
Sbjct: 540 KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIR 574
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+ R FE+++ + R+ AK K D++ N+++ AYCR G M+ + ++ + ++PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M++ A + M K +P + +SLI K+ EA
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEA 800
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+ RG +EEA ++ + +A D V N++L Y ++ + V+++++
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+P T++ LI + ++ + A M KKG +P+
Sbjct: 357 FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
EA ++ ++ EA +V NS++ AY R G ++ + + ++ + I PD T+ L+
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
F K A + +M G QP
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPN 430
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + +TG + + V ++
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 61 ISPDYNTFHILIK 73
P+ TF+ LIK
Sbjct: 427 CQPNICTFNALIK 439
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G A L D D+ S++ AY G + V +KL+E
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLI 107
P T+++++ + K M +VD M G P+ ++LI
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLI 298
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEA +L +FEA D V +++ AYC++G+M+ +++++
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P TF++L+ F M + + M KG P +SL+
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G EA +L + K + D V ++ YC+ G M+ V + +
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI KE A + +M K G QP +S++ L K EA+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 121 CL 122
L
Sbjct: 512 KL 513
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A +L + + ++ NS++ C++G++E + ++ + +
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++ D T+ L+ + K A + +M KG QP
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA L E K DV+ ++++ YCR G+++ V ++ +
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P+ + +I + A +M ++G P+ + ++LI G +RA S
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 118 EALCLQHVKDIAKD 131
+ H +DI D
Sbjct: 372 KFFYEMHSRDITPD 385
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ ++L AK + NS++ YC ++++ + + +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ L+K K + A+ +M KG S LI K + EA
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G A + + ++ DV+ +++ +C+ GDM + ++
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ PD TF LI + K A+R M + G P ++LI L G + + +
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 118 EAL 120
E L
Sbjct: 477 ELL 479
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E+A+++ + F D V+ N+ + YCR GDM I + +++
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ P+ TF+ LI F K A + M +KG P E ++LI GK+
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+ + DV+ NS++ Y G++ + + + L
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLG 626
Query: 61 ISPDYNTFHILIKYFRKEKMYMLA--YRTMVDMH 92
I P T+H LI KE + ++ Y M+ M+
Sbjct: 627 IKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMN 660
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY-------DVVLLNSMLCAYCRTGDMESVIHVM 53
+I CR ++ RD E +D+ +V N+++ YC+ G++++ +
Sbjct: 217 LIGGLCR-------EKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMR 269
Query: 54 RKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++ E +++P+ TF+ L+ K + A + +M G P+
Sbjct: 270 ERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPD 315
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 49/106 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++ +CR G +A E+ + + + NS++ +C +M+ ++K+ E +
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P T++ LI + K + ++ + M + G +P SLI
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLI 498
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI K LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 CLQHVKDIAKDRC 133
L +KD+ C
Sbjct: 447 DL--LKDMESTGC 457
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ G + + + + A+ K DVV N+++ A CR + + + ++ ++
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++PD TF L++ F +E A R M + G
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A L +D E+ + N+++ C+ +E V ++D
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI K+K A+ + M +G QP +S++ H K
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCK 543
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 35/155 (22%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ R G EE L A+ K DVV+ +S++ AY R GD+ I V ++ +
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375
Query: 61 ISPDYNTFHILIKYF-RKEKMY-----------------MLAYRTMVD------------ 90
ISP+ T+ ILI R ++ +L Y +++D
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435
Query: 91 -----MHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M +KGH P+ +CS LI L + EAL
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F R GC E +L R+ + D+V N+M+C YC I + L
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF ILI + K+ A M ++G +P S LI
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702
>gi|121489753|emb|CAK18848.1| salt-inducible protein precursor [Phillyrea latifolia]
Length = 163
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ C + A+ L D + + YDVV N++ YCRTG E H++ + +
Sbjct: 44 VVNGLCKEECVDVARSLV-DAMKRTNMYDVVTFNTLFNGYCRTGKFEEASHLLVNMRKEG 102
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + T +ILI + + +++ A + M + P+ C++L+ + K + E +
Sbjct: 103 ILANTVTCNILISFLCRFRLFQQAKEVVKTMVAQDLNPDFVTCTTLLANFSKKSSSEEVM 162
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI K LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 CLQHVKDIAKDRC 133
L +KD+ C
Sbjct: 447 DL--LKDMESTGC 457
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ G + + + + A+ K DVV N+++ A CR + + + ++ ++
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRG 211
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++PD TF L++ F +E A R M + G
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A L +D E+ + N+++ C+ +E V ++D
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI K+K A+ + M +G QP +S++ H K
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI K +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 CL 122
L
Sbjct: 622 SL 623
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI K LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 CLQHVKDIAKDRC 133
L +KD+ C
Sbjct: 447 DL--LKDMESTGC 457
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ G + + + + A+ K DVV N+++ A CR + + + ++ ++
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++PD TF L++ F +E A R M + G
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A L +D E+ + N+++ C+ +E V ++D
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI K+K A+ + M +G QP +S++ H K
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI K +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 CL 122
L
Sbjct: 622 SL 623
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G F++A + D +A V+ N+++ YC+ G M +++++
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ILI F +++ A + +M ++G QP +SLI L EAL
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 121 CLQ 123
LQ
Sbjct: 355 GLQ 357
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR AK++ + + + + +VV NS++ C G ++ + + K+ +
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI F K+KM A + D+ K+G P ++LI GK +A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 121 CLQ 123
L+
Sbjct: 425 LLR 427
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G +EA++LA++ E K D+V N ++ A C+ G+ + R LDE+
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV---RLLDEMT 501
Query: 61 I------SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ + T+++LIK F + A R + +M +KG P
Sbjct: 502 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 545
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ +EA+++ D + +V+ N+++ AY + G M+ + + +
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ P+ +T++ LI F +E A + +M G
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G F+EA+++ K K DVV N+M+ +CR+G ++ + M +++E
Sbjct: 491 LIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I + K++ A + DM K +P +SLI
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLI 597
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C G EE ++L D K ++V N+++ YC+ GD+E+ V ++L
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P TF +I F K+ ++ + R + ++ ++G
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERG 305
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FCR G +EA ++ D ++++ Y + DM + I + R +++
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNK 585
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ T+ LI F + + LA T +M + P ++LI K
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAK 637
>gi|357147690|ref|XP_003574443.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Brachypodium distachyon]
Length = 859
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI CR +EEA++L D + + VV N+++ +Y R+GD+ + ++ +++E
Sbjct: 223 MIFGCCRSCKWEEARRLLDDMRKEGIEPGVVTWNTLISSYARSGDLNVAVELLEQMEESG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE-------ELCSSL-IFHLGK 112
+ PD T+ L+ F + A + + M G +P C+SL + + G
Sbjct: 283 VEPDVVTWTSLVSGFVHSDRGVEALQCFIRMRLAGVEPNGMTIACAISACASLKLLNQGS 342
Query: 113 MRAHSEALCLQHVKDI 128
M H A+ + VK++
Sbjct: 343 M-LHCHAIKVGSVKNV 357
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G E A +L + E+ K D N ++ G + + + R++ +
Sbjct: 429 MISGYIRNGDDERAFELFQTMESYGVKRDTASWNILIAGSVHNGYFDRALRIFRQMQAVL 488
Query: 61 ISPDYNTFHILIKYF 75
I PDY T +I F
Sbjct: 489 IKPDYITVLSIIPAF 503
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A++L +D + + D+ + N M+ Y + G V + + E+ SPD TF+ LI
Sbjct: 793 DAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLI 852
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDR 132
+ + +M A + +M K G+ P ++LI G+++A+ +A + K IA+
Sbjct: 853 MLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELV--FKSIAETG 910
Query: 133 C 133
C
Sbjct: 911 C 911
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G E A + R + + D V NS+L A+ R G +E V + + +
Sbjct: 226 MISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR 285
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S D T++ +I + K M+ A V M ++G P+ + LI LGK +EA
Sbjct: 286 CSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAA 345
Query: 121 CL 122
+
Sbjct: 346 AM 347
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA+ G FE A + + A + + N +L A+ R G + + ++L E+
Sbjct: 676 LLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMG 735
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ TF ++ F + A M + G P ++ +L+ + +A
Sbjct: 736 ITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAE 795
Query: 121 CLQHVKDIAK 130
L VKDI K
Sbjct: 796 EL--VKDIKK 803
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYM-LAYRTM 88
V + NS++ Y R GD SV ++ ++ + PD TF+I+IK + M LA +
Sbjct: 114 VQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLL 173
Query: 89 VDMHKKGHQPEEELCSSLI 107
D++ G +P+ ++LI
Sbjct: 174 QDVYAAGLRPDTITYNTLI 192
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 48/119 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R +EA+ L R+ + ++ +++ AY R E V + + E
Sbjct: 851 LIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG 910
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD ++++I +RK + + M G +P L+ GK A +A
Sbjct: 911 CKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKA 969
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI K LA R +M G P+E ++LI +L + +AL
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 354
Query: 121 CLQHVKDIAKDRC 133
L +KD+ C
Sbjct: 355 DL--LKDMESTGC 365
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ G + + + + A+ K DVV N+++ A CR + + + ++ ++
Sbjct: 60 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++PD TF L++ F +E A R M + G
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A L +D E+ + N+++ C+ +E V ++D
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI K+K A+ + M +G QP +S++ H K
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 451
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI K +A + + M KG +P + + ++ L + +AL
Sbjct: 470 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 529
Query: 121 CL 122
L
Sbjct: 530 SL 531
>gi|384493379|gb|EIE83870.1| hypothetical protein RO3G_08575 [Rhizopus delemar RA 99-880]
Length = 493
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+YD+ N++L AY R D +V +RK++E +SP ++++++++ F +K L R
Sbjct: 35 RYDLNTYNALLAAYARAKDQTNVTETLRKMEEEGVSPTTDSYNLIMEAFGNDKNIALQNR 94
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAK 130
+M +KG EL S +HL + + ++ L L+ ++D+ K
Sbjct: 95 LKEEMQQKG----IELNSVTYYHLLRGQQNNIELALETLEDMKK 134
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G E++++ R+ + ++DVV SM+ Y + G + V+ + +++ ++ I PD +
Sbjct: 211 GSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVY 270
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDI 128
+ +I K ++ A+ M M +KG P +SLI L + R EA + D
Sbjct: 271 NAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEA---KGAFDD 327
Query: 129 AKDRCAMPFMRKFFIF 144
RC P +R + F
Sbjct: 328 MLKRCISPTIRTYHAF 343
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A +G EA L + E K ++V NS++ CR +E + +
Sbjct: 273 VIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRC 332
Query: 61 ISPDYNTFHILIKYFRK-EKMYMLAYRTMVDMHKKGHQP 98
ISP T+H ++ R E+++ L + M K G QP
Sbjct: 333 ISPTIRTYHAFLRILRTGEEVFAL----LEKMRKMGCQP 367
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FCR ++A + D E D VL NS+L C+ ++E + V + ++ L
Sbjct: 885 MIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILK 944
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P T+ ILIK + K++ A + +M K G +P
Sbjct: 945 IKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRP 982
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVIHVMRKL 56
M+ + + FEEA+Q+ + F D+ D++ + M+ YCR + ++V+ +
Sbjct: 333 MLDSLLKAELFEEAEQIYNKVFTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNVLSIM 392
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
E I PD ++ +I K A+ +M +G P +SLI
Sbjct: 393 KERGIKPDEVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLI 443
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 58/107 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR EA +L K K D+V++N+++ +C TG+M+ +++++D +
Sbjct: 439 LIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMN 498
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T++ L++ E + A M +M ++G +P+ ++LI
Sbjct: 499 IDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G FEEA++L + + + K D + N+++ Y + GD + V ++ L
Sbjct: 509 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLG 568
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+P T++ L+K K + LA + +M +G P + S+I + K
Sbjct: 569 FNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F +G ++A L E K + DVV N +L +CR G M+ ++RK+ E
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
I PD +T+ LI + + A+R +M ++G P+++
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C G EA +L + K K +V N+++ YCR+GD+ + K+
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ LI F K + A+ + M KG QP+
Sbjct: 566 VGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPD 604
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A C+ ++ K D E K D+V N+++ AYCR G + VM +
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T++ +I K+ Y+ A +M G P+ ++L+
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL 297
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A L K K D+V N ++ +C+T +ME + ++
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ ++ IL+ + A+R +M +KG +P C+++I
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVI 542
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +CR G EA ++ + DVV N++L C+ + + ++ E
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD+ TF LI KE A M +K +P+
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPD 464
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA ++ + E + DV+ + + A+CR D +V V+ +++
Sbjct: 340 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF I++ K K A + M K+G P+ SSLIF LGK A
Sbjct: 400 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK------AG 453
Query: 121 CLQHVKDIAKD 131
L VK+I +D
Sbjct: 454 RLTDVKEIVED 464
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G + K++ D E + DV+ N+++ C E+ + ++ K++E++
Sbjct: 445 LIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVS 504
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAY 85
PD T+H L+K F RK++M +L +
Sbjct: 505 CKPDLKTYHPLLKMFCRKKRMKVLKF 530
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + E+A + R+ + +++ N ++ YC+ ++ +M ++++
Sbjct: 306 LMDALVKEASVEDAHNVFRELKCSI-PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSG 364
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ I+ +EK + + +V M KG +P + ++ LGK + +EAL
Sbjct: 365 LEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEAL 424
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I R G +EA R+ E D +N ++ A + +E +V R+L + +
Sbjct: 271 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL-KCS 329
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I + +F++LI + K K A++ M ++ K G +P+
Sbjct: 330 IPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPD 368
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 58/110 (52%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
FE ++++ ++ AK K D++ N+++ AYCR G M+ H+ ++ E + PD T++
Sbjct: 505 FERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNT 564
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + + M+ A + M K G +P + +S+I K+ +A+
Sbjct: 565 FVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAI 614
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ R G EEA +L + K DV +ML + RTG ES + V ++
Sbjct: 180 LISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 61 ISPDYNTFHILIK 73
P+ TF+ LIK
Sbjct: 240 CKPNICTFNALIK 252
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G F+E K++ F + D Y N+++ AY R G + + + +++ + I+PD +T+
Sbjct: 300 GVFKEMKRVG--FVPERDTY-----NTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTY 352
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF------HLGKMRAHSEALC 121
+ ++ + ++ + + + +M +P E SL+ +G+M A +E +C
Sbjct: 353 NAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEIC 411
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
+EA ++ R+ E +V NS++ AY R G +E + + ++ E I D T+
Sbjct: 155 IKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTA 214
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++ F + A R +M G +P
Sbjct: 215 MLSGFVRTGKDESAMRVFEEMRTAGCKPN 243
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYN 66
RG +EEA + D ++ D V N++L Y ++ ++ I V+R+++ SP
Sbjct: 116 RGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIV 175
Query: 67 TFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
T++ LI + ++ + A M ++G
Sbjct: 176 TYNSLISAYARDGLLEEAMELKNQMVERG 204
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA ++ + E + DV+ + + A+CR D +V V+ +++
Sbjct: 317 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 376
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF I++ K K A + M K+G P+ SSLIF LGK A
Sbjct: 377 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK------AG 430
Query: 121 CLQHVKDIAKD 131
L VK+I +D
Sbjct: 431 RLTDVKEIVED 441
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G + K++ D E + DV+ N+++ C E+ + ++ K++E++
Sbjct: 422 LIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVS 481
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAY 85
PD T+H L+K F RK++M +L +
Sbjct: 482 CKPDLKTYHPLLKMFCRKKRMKVLKF 507
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + E+A + R+ + +++ N ++ YC+ ++ +M ++++
Sbjct: 283 LMDALVKEASVEDAHNVFRELKCSI-PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSG 341
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ I+ +EK + + +V M KG +P + ++ LGK + +EAL
Sbjct: 342 LEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEAL 401
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I R G +EA R+ E D +N ++ A + +E +V R+L + +
Sbjct: 248 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL-KCS 306
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I + +F++LI + K K A++ M ++ K G +P+
Sbjct: 307 IPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPD 345
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA C+ G F+EAK+ + K D V+ ++ + YC+ G I V+R +++
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P T+++LI+ F ++ + M +M +KG P +SLI
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLI 626
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G +A+++ + DVV S+L AYC G++ + ++ ++ +
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+++L++ + A R + M++KG+ + C+ +I + L
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIII----------DGL 466
Query: 121 CLQHVKDIAKD 131
C D+A D
Sbjct: 467 CRNSRLDVAMD 477
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 61/138 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 331 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI + + A R DM + QP S +I L K EA+
Sbjct: 391 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 450
Query: 121 CLQHVKDIAKDRCAMPFM 138
CL + ++ D F+
Sbjct: 451 CLLNELNLRPDIAPQAFI 468
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+G +A+ + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++ LI + +++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G EA++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 120 LCL 122
L
Sbjct: 458 AAL 460
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA R + A ++ D EA + D+ N+M+ Y R G + +L+
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E+ M K G +E +++I GK L
Sbjct: 363 FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD--L 420
Query: 121 CLQHVKDI 128
LQ KD+
Sbjct: 421 ALQLYKDM 428
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+G +A+ + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++ LI + +++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G EA++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 120 LCL 122
L
Sbjct: 458 AAL 460
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA R + A ++ D EA + D+ N+M+ Y R G + +L+
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E+ M K G +E +++I GK L
Sbjct: 363 FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD--L 420
Query: 121 CLQHVKDI 128
LQ KD+
Sbjct: 421 ALQLYKDM 428
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR GC + A L ++ E K K +V NS++ C+ G + +++ +
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ TF++LI F KE A +M KG P +SL+
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLM 317
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 61 ISPDYNTFHILIK 73
P+ T++ LI+
Sbjct: 516 NEPNDCTYNTLIR 528
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C EA L + +VV NS++ C++GD + ++RK+DE
Sbjct: 141 LINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ D T+ +I ++ A +M KG
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 235
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G +A L + K DVV N+++ +C+ G+ME + +
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
I P Y +F ILI F + A+R +M +KG +P C+++I G +RA
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII--KGYLRA 587
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC G EA +L + + K K +V N+++ Y R G++ + +
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T++ LI F KE+ + A+ + +M ++G P
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLP 642
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++F + F+ A L + E + ++V N++L + R G M+ V+ K+ +
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
I+PD +T+ LI Y K+ M A+R +M ++G P+++
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKE-AFRVHDEMLQRGFVPDDKF 716
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A C+ G + + E K D+V N+++ AYCR G + ++ +
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P T++ LI KE Y A R + +M G P
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G + A ++ DF + +V LN M+ A C+ G +++V + +++E
Sbjct: 195 LLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKG 254
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D T++ L+ + + + A+ + M KG +P ++LI L K ++ A
Sbjct: 255 VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERA 313
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 159 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 218
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI + + A R DM + QP S +I L K EA+
Sbjct: 219 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 278
Query: 121 CLQHVKDIAKDRCAMPFMRKFFI 143
L + ++ D F+ I
Sbjct: 279 GLLNELNLRPDIAPQAFIYNPVI 301
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++FCR G +A Q RD + D+V NS++ C+ G + +++ L
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE-- 118
I PD T++ LI + E ++ A + + G P E S LI + K + SE
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQF 707
Query: 119 -----------ALCLQHVKDIAKDRCAMPFMRKFFIF 144
A ++HV I C FM + F F
Sbjct: 708 TILMGNWGFWLAAIIRHVSSIG---CIAIFMWQIFGF 741
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R ++A +L + + D + N ++ A C+TG E + ++ ++
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P N+ +ILI F + A + + DM ++G P+ +SLI L KM EAL
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 121 CL 122
L
Sbjct: 638 NL 639
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G FEEA ++ AK + V N ++ A C+ G ++ + + ++
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472
Query: 61 ISPDYNTFHILI 72
PD TF+ LI
Sbjct: 473 CKPDIYTFNSLI 484
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G ++A Q+ + +K K D+ NS++ C+ ME + + R +
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + ++ A + + +M +G + + LI L K A + L
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCL 567
Query: 121 CL 122
L
Sbjct: 568 GL 569
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E+ L + + N ++ ++CRTG + + +R + +
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T++ LI K + A + KG P+ ++LI
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G A + + K + +V+ ++ +C+ G E V+ +
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ LI K+ A + +M KG +P+ +SLI+ L K EAL
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497
Query: 121 CL 122
L
Sbjct: 498 GL 499
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G +EA+ + +K + VL N+++ Y +G E ++ K +A
Sbjct: 311 LMHGLCRMGKVDEARAML----SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366
Query: 61 -ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD TF+I+I K+ + A + +M KKG +P
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEP 405
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G FE+A ++ + + + V N+++ A C+ ++E+ + R L
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI+ K +A +M KG +P+E S LI L R EAL
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423
Query: 121 CLQHVKDIAKDRCA 134
L +K++ CA
Sbjct: 424 ML--LKEMESSGCA 435
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G EEA + + + D V NS++ +CR G++ + ++ + E
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Query: 61 ISPDYNTFHILI 72
PD T++ LI
Sbjct: 294 FDPDVYTYNSLI 305
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ EEA QL + K D NS+L +CR GD+E +++ +
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538
Query: 61 ISPDYNTFHILI 72
PD T+ LI
Sbjct: 539 CEPDIFTYGTLI 550
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA C+ E A LAR +K DV N+++ C + + + + + ++
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ ILI E+ A + +M G + ++LI L K R +A
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+G +A+ + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESG 957
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++ LI + +++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G EA++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEA 457
Query: 120 LCL 122
L
Sbjct: 458 AAL 460
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA R E A ++ D EA + D+ N+M+ Y R G + +L+
Sbjct: 303 LLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F +E+ M K G +E +++I GK L
Sbjct: 363 FSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD--L 420
Query: 121 CLQHVKDI 128
LQ KD+
Sbjct: 421 ALQLYKDM 428
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GGC +EAK + D +K + D + + +YC D++S + V+ K+
Sbjct: 257 LLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYN 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ T++ +IK K + AY + +M +G +P+
Sbjct: 317 ILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPD 355
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI K LA R +M G P+E ++LI +L + +AL
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450
Query: 121 CL 122
L
Sbjct: 451 DL 452
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 45/94 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 182 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALR 241
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P + + LI K+ +AL
Sbjct: 242 VKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A L ++ E+ V N+++ C+ +E V ++D
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI K+K A + + M +G QP +S++ H K
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCK 547
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A QL ++ + + + NS+L YC+ GD++ +++ +
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG 565
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
D T+ LI K +A + + M KG
Sbjct: 566 FEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
++SAF R G F +A + R + +V N +L Y + + V+ ++ + E
Sbjct: 178 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH 237
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD T++ LI R+ +Y A + +M G +P++ +SL+ GK R H EA
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 120 L 120
+
Sbjct: 298 I 298
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + R G E+ + + + ++ + D N+++ AY R G M+ + ++
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++I +K + M+ A + M +G +P E +S++
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIV 740
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 35 SMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
S++ +Y R G + + + +++ E I PD +T++ ++ + + A + +M ++
Sbjct: 458 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 517
Query: 95 GHQPEEELCSSLIF------HLGKMRAHSE 118
+P+E SSL+ L KM+A S+
Sbjct: 518 DCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS++ + G E+A L ++ E K K DVV +++ R G +++ I ++
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 61 ISPDYNTFHILIK 73
P+ T++ LIK
Sbjct: 379 CKPNLCTYNALIK 391
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +E ++ + + + DVV+ +++ + CR G ++ VM + E
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI KE A +M +KG QP+ ++LI L + EA+
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289
Query: 121 CL 122
L
Sbjct: 290 AL 291
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C + A +L + + +VV+ + +L YC+TG ESV V ++
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI + A R M M ++G +P + LI + K + EAL
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254
Query: 121 CLQ 123
L+
Sbjct: 255 DLR 257
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL--DE 58
+I++ C+ G EA L ++ K + DVV N+++ +M+ + ++ ++ E
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRA 115
+ PD TF+ +I K A + M + G + C+ + F+L G +R
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR-----CNLVAFNLLIGGLLRV 354
Query: 116 H 116
H
Sbjct: 355 H 355
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++SA+ +EAK+ ++ K D+V N+M+ A CRTG M+ ++ + +L++
Sbjct: 166 LLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTGSMDDILSIFEELEKN 225
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +F+ L++ F + ++++ R M K P +S + L + + ++A
Sbjct: 226 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYNSRVRGLTRNKKFTDA 285
Query: 120 LCLQHV 125
+ L +V
Sbjct: 286 IDLINV 291
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR EEA ++ + D V N+++ +CR GD+E + +KL+E
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
S +TF+ LI F + +A + +M KGH+ +
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++I+I K A M D KG+ P+ ++LI
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA +L +D K D V S++ C GD+E + + +
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K + + + A + M +M ++G P+ + + +I L KM S+A
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 416
Query: 121 CL 122
+
Sbjct: 417 VV 418
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C G EA +L A Y DVV N+++ C+ + +H +R++
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD T++ +I + K M A + D KG P++ SLI L
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGL 336
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E + ++ K + + N ++ +CR+ ME V+ K+ +
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-GKMRAH 116
+ PD +F+ LI F + AY + +KG+ + ++LI GK+ H
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 588
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ + A QL D + NS+L C+ G + V +++
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 496
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
P+ T++ILI+ F + A + +V M ++G P+ ++LI+
Sbjct: 497 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +A + D K DV N+++ YC+ ++S + ++ ++ E
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD T++ ++ K T +M KG P
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR EEA ++ + D V N+++ +CR GD+E + +KL+E
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
S +TF+ LI F + +A + +M KGH+ +
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++I+I K A M D KG+ P+ ++LI
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA +L +D K D V S++ C GD+E + + +
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K + + + A + M +M ++G P+ + + +I L KM S+A
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 415
Query: 121 CL 122
+
Sbjct: 416 VV 417
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E + ++ K + + N ++ +CR+ ME V+ K+ +
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-GKMRAH 116
+ PD +F+ LI F + AY + +KG+ + ++LI GK+ H
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 587
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C G EA +L A Y DVV N+++ C+ + +H +R++
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD T++ +I + K M A + D KG P++ SLI L
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGL 335
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ + A QL D + NS+L C+ G + V +++
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 495
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
P+ T++ILI+ F + A + +V M ++G P+ ++LI+
Sbjct: 496 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +A + D K DV N+++ YC+ ++S + ++ ++ E
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD T++ ++ K T +M KG P
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 62/119 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + R F++++++ R+ K K D + N+++ AYCR G M+ + ++ + A
Sbjct: 655 LMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSA 714
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++ I + + M+ A + M K+G +P++ +S++ K+ EA
Sbjct: 715 LVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEA 773
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ +GG EEA L K K DV ++L + + G + I V ++ +
Sbjct: 340 LISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVG 399
Query: 61 ISPDYNTFHILIK 73
P+ TF+ LIK
Sbjct: 400 CKPNICTFNALIK 412
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G F+E K+ F A+ D + N+++ AY R G + + V + + E + PD +T+
Sbjct: 460 GIFKEMKRAG--FVAERDTF-----NTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTY 512
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ ++ + ++ + + + +M +P E SSL+
Sbjct: 513 NAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLL 551
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG----DMESVIHVMRKL 56
+I+A+ G + +A L + ++ N +L Y + G ++ +++ MR
Sbjct: 199 LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMR-- 256
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
++PD T++ LI R+ +Y A M +G P++ ++L+ GK R
Sbjct: 257 -SRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRP 315
Query: 117 SEAL 120
EA+
Sbjct: 316 QEAM 319
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 37 LCAYCRTGDM-ESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
L + CR G + E +H+ +++ +PD T++ L+ F K + A + + +M G
Sbjct: 270 LISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANG 329
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALCLQ 123
P +SLI K EAL L+
Sbjct: 330 FSPTSVTYNSLISAYAKGGLLEEALDLK 357
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+EA ++ ++ EA V NS++ AY + G +E + + ++ I PD T+ L
Sbjct: 316 QEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTL 375
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ F K A + ++M G +P
Sbjct: 376 LSGFEKAGKDDFAIQVFLEMRAVGCKP 402
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS RG +EEA L + + + D V N++L + ++ + + V+++++
Sbjct: 270 LISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANG 329
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SP T++ LI + K + A M KG +P+
Sbjct: 330 FSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPD 368
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR EEA ++ + D V N+++ +CR GD+E + +KL+E
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
S +TF+ LI F + +A + +M KGH+ +
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 608
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++I+I K A M D KG+ P+ ++LI
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA +L +D K D V S++ C GD+E + + +
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ L+K + + + A + M +M ++G P+ + + +I L KM S+A
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 417
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C G EA +L A Y DVV N+++ C+ + +H +R++
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD T++ +I + K M A + D KG P++ SLI L
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGL 338
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ + A QL D + NS+L C+ G + V +++
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
P+ T++ILI+ F + A + +V M ++G P+ ++LI+
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E + ++ K + + N ++ +CR+ ME V+ K+ +
Sbjct: 474 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-GKMRAH 116
+ PD +F+ LI F + AY + +KG+ + ++LI GK+ H
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 590
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +A + D K DV N+++ YC+ ++S + ++ ++ E
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T++ ++ K T +M KG P + LI
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EA+ LA + K +DV+ NS++ Y G+++ + + + +
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632
Query: 61 ISPDYNTFHILIKYFRKEKMYMLA--YRTMVDMH 92
I P NT+H LI KE + ++ Y+ M+ M+
Sbjct: 633 IKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMN 666
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 59/112 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G E+A+++ + F V N+++ YC+ GD+ + K++ +
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P++ T++ L+K F + K A + + M +KG P E ++LI G+
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGR 474
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G +A EA + + V NS++ +C +ME ++K+ E
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T++ LI + + ++ ++ + +M KKG +P
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKP 495
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EEA + + + + ++ NS+L CR ME V+ +++
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
PD T+ L K + + +KG Q + CS L+ L G M
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377
Query: 118 EAL 120
E L
Sbjct: 378 EVL 380
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A++L + + + + N+++ YC+ G +E ++ ++
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P TF+ L+ + +M A R + +M G P+
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G ++A L EA+ + D + N ++ + + G M V +++ +
Sbjct: 677 LIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRG 736
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-GKMRAHSEA 119
+ P T+ ILI K K + AY +M + G P +C +LI L + R+H
Sbjct: 737 LIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDAD 796
Query: 120 LCLQHVKDIAKDRC 133
+ + KD C
Sbjct: 797 VICSEMNMKGKDDC 810
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
++SAF R G F +A + R + +V N +L Y + + V+ ++ + E
Sbjct: 178 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH 237
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD T++ LI R+ +Y A + +M G +P++ +SL+ GK R H EA
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 120 L 120
+
Sbjct: 298 I 298
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + R G E+ + + + ++ + D N+++ AY R G M+ + ++
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++I +K + M+ A + M +G +P E +S++
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIV 740
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 35 SMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
S++ +Y R G + + + +++ E I PD +T++ ++ + + A + +M ++
Sbjct: 458 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 517
Query: 95 GHQPEEELCSSLIF------HLGKMRAHSE 118
+P+E SSL+ L KM+A S+
Sbjct: 518 DCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS++ + G E+A L ++ E K K DVV +++ R G +++ I ++
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 61 ISPDYNTFHILIK 73
P+ T++ LIK
Sbjct: 379 CKPNLCTYNALIK 391
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A CRGG + A+ + D DVV N++L A+CR +++ I V+ ++ E +
Sbjct: 19 LAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRMREAGV 78
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
PD T++ LI + + + A +M + G P+
Sbjct: 79 RPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDS 117
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 59/107 (55%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR EA +L K K D+V++N+++ +C G+M+ +++++D ++
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T++ L++ E + A M +M ++G +P+ ++LI
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G FEEA++L + + + K D + N+++ Y + GD + V ++ L
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
+P T++ L+K K + LA + +M +G P + S+I + + A
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R +EA+++ E K DVV N+M+ YC+ G M + M + ++
Sbjct: 545 LIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVG 604
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI + K+ A + DM K+ QP SSLI K+ A
Sbjct: 605 RIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAE 664
Query: 121 CL 122
CL
Sbjct: 665 CL 666
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ A+ L + + D + +++ + R ++ + +++
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ +IK + + M A M M K G P+E ++LI K S AL
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629
Query: 121 CLQHVKDIAKDRC 133
L + D+ K RC
Sbjct: 630 SL--LCDMMKRRC 640
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +A + + A D + ++++ C+ G ++ ++R+
Sbjct: 370 VIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWE 429
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++ LI F ++A +V+M ++GH P+ +LI L SEAL
Sbjct: 430 LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL 489
Query: 121 CLQ 123
++
Sbjct: 490 LVR 492
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
M+ C G E+ +L EA++ + V N ++ YCR GD+ I ++ +++
Sbjct: 265 MVRGLCLEGLVEKGLKL---IEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEME 321
Query: 58 ELAISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ P T+ L+ + RK + +A + +M ++ P ++ +S+I L K R+
Sbjct: 322 AKGLLPTVVTYGTLMSWLGRKGDLEKIA-SLLSEMRERRLPPNVQIYNSVIDALCKCRSA 380
Query: 117 SEAL 120
S+AL
Sbjct: 381 SQAL 384
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K+KM A + +M ++ P++ + ++LI
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLI 546
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +EA++L + A K D + +++ C+ GDMES + + R++ E
Sbjct: 394 LINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I D F LI +E A R + DM G +P++
Sbjct: 454 IELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G A+ + + + + VV N+++ C++GD+E + ++
Sbjct: 254 LMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEG 313
Query: 61 ISPDYNTFHILIKYFRKE 78
+ PD TF LI KE
Sbjct: 314 VCPDVFTFSALINGLCKE 331
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G E A QL +F + + +V+ + ++ +C G E ++ ++++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ILI RK+ + M KG +P +++ L + + EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G FEEA +L E + + D + N ++ + G +E I ++ ++
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T+ ++ +K + A M M G +P
Sbjct: 303 CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++ C+ GC EA +L ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHSE 118
PD T++I+I F + + A M K G P++ ++LI F K+ E
Sbjct: 519 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVE 578
Query: 119 ALCLQHVKDIAKD 131
L + +D++ D
Sbjct: 579 LLHMMVQRDVSLD 591
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC GG +EEAK+L + + + +VV N ++ C+ G + ++ + +
Sbjct: 283 LIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG 342
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI+ F A V M KG +P+ + LI K EA+
Sbjct: 343 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 402
Query: 121 CL 122
L
Sbjct: 403 KL 404
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A +L + + DVV N M+ +CR G + + +K+++
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 61 ISPDYNTFHILIKYFRKEK 79
+PD T+ LI+ F + K
Sbjct: 553 CTPDKITYATLIRGFFESK 571
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++ C+ GC EA +L ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 451 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 510
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHSE 118
PD T++I+I F + + A M K G P++ ++LI F K+ E
Sbjct: 511 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVE 570
Query: 119 ALCLQHVKDIAKD 131
L + +D++ D
Sbjct: 571 LLHMMVQRDVSLD 583
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A +L + + DVV N M+ +CR G + + +K+++
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544
Query: 61 ISPDYNTFHILIKYFRKEK 79
+PD T+ LI+ F + K
Sbjct: 545 CTPDKITYATLIRGFFESK 563
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G + A + RD + D+V NS++ C+TG + +++ KL
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I PD T++ LI + KE M+ A+ + G P E
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 329
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G +EA +L D + D + N ++ A CR G++E + + +
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI + A + DM +G P+ +SLI L K EAL
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279
Query: 121 CL 122
L
Sbjct: 280 NL 281
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 20 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 79
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI K++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 80 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 139
Query: 121 CL 122
L
Sbjct: 140 GL 141
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A CR G E+ L D +K + + N ++ CRTG+++ + +R +
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T++ LI K A + +G P+ ++LI
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 50/120 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EEA+ + + K + V N ++ A C+ ++ +++ +
Sbjct: 55 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 114
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI K + A DM +G ++LI + A EAL
Sbjct: 115 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 174
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G E A QL +F + + +V+ + ++ +C G E ++ ++++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ILI RK+ + M KG +P +++ L + + EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G FEEA +L E + + D + N ++ + G +E I ++ ++
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKG 302
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T+ ++ +K + A M M G +P
Sbjct: 303 CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
>gi|125541439|gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indica Group]
Length = 502
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLAVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
PD T++ LI + + + A +M + G P+
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDS 117
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G +EAK + K K ++V NS++ YC ++ + + ++
Sbjct: 285 LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ I+I F K KM A + +MH K P+ +SLI L K S AL
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYAL 404
Query: 121 CL 122
L
Sbjct: 405 KL 406
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +A + AK VV N+++C C G ++ I ++ K+
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I+P TF IL+ F KE A V M KK +P
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKP 312
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + + +++ NS+L A C+ ++ I ++ KL +
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449
Query: 61 ISPDYNTFHILI 72
I P T++ILI
Sbjct: 450 IQPSVCTYNILI 461
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS FC+ +EA +L + K DVV NS++ C++G + + ++ ++ +
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
P+ T++ L+ K A + + K H + +C+
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKL--KDHNIQPSVCT 456
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
++SAF R G F +A + R + +V N +L Y + + V+ ++ + E
Sbjct: 160 LVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEH 219
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD T++ LI R+ +Y A + +M G +P++ +SL+ GK R H EA
Sbjct: 220 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 279
Query: 120 L 120
+
Sbjct: 280 I 280
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS++ + G E+A L ++ E K K DVV +++ R G +++ I ++
Sbjct: 301 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 360
Query: 61 ISPDYNTFHILIK 73
P+ T++ LIK
Sbjct: 361 CKPNLCTYNALIK 373
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+ R G E+ + + + ++ + D N+++ AY R G M+ + ++ + PD
Sbjct: 620 YSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPD 679
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T++I +K + M+ A + M +G +P E +S++
Sbjct: 680 VVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIV 722
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHV---MRKLD 57
+IS FC+ G +A +A++ A V N+++ YC+ G + + HV ++++
Sbjct: 194 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 253
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ ISPD TF++LI + KE A + +M ++G
Sbjct: 254 QAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQG 291
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ A ++ ++ + +VV NS++ CR G +E I ++ +++EL
Sbjct: 267 LINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELG 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++ +T + ++ F K+ M + A + + ++G +P
Sbjct: 327 LACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKP 364
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ +EA QL D + K D+ N L YC G +E ++H++ ++
Sbjct: 498 MIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEG 557
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I + K K A + ++ K G +P + ++LI G+ S+A+
Sbjct: 558 LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAI 617
Query: 121 CL 122
+
Sbjct: 618 GI 619
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A CR G + A + + + VV N ++ A C++G +E + ++ E
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P TF ILI + + + + +M G P E + + +I
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMI 323
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI CR G EA +L + +K K VV N + A C+ G+ME H + LDE+
Sbjct: 322 MIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEME---HAEKILDEML 378
Query: 61 ISPDY---NTFHILIKY-FRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
++ + F+ ++ + R L R + +M + +P + L ++ I L K H
Sbjct: 379 LAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKH 438
Query: 117 SEA 119
EA
Sbjct: 439 EEA 441
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 46/106 (43%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+C G EE L +++ K D+V +++ YC+ DM + +L + + P+
Sbjct: 537 YCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPN 596
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
++ LI + + A + M G QP +SL++ +
Sbjct: 597 AVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWM 642
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +++ V+ ++ E +
Sbjct: 17 LAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMREAGV 76
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SPD T++ LI + + M A +M + G P+
Sbjct: 77 SPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPD 114
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S FCR G A ++ ++ E + K V ++ + R+ +ME+ I + ++EL
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +LI F + A R M +K +P E + +++I LG + S
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMI--LGYCKEGSSYR 496
Query: 121 CLQHVKDIAKDRCA 134
L+ +D+ + A
Sbjct: 497 ALRLFRDMEEKELA 510
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 50/104 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G EA +L + K + + V+ N+M+ YC+ G + + R ++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE 508
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
++P+ ++ LI+ KE+ A + M G P + +C+
Sbjct: 509 LAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICN 552
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +A L RD +++ +V N ++ +CR GD ++++++E
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T+ ILI F + A + M + G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLI 450
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR EA ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T+++L+ F ++ A + + +M ++G +P + + LI
Sbjct: 369 LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
>gi|115449175|ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|113537898|dbj|BAF10281.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|215704904|dbj|BAG94932.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 473
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 30 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 89
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
PD T++ LI + + + A +M + G P+
Sbjct: 90 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDS 128
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR G EA+++ K VV +++ AYC G+M+ + H + +++ A
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P + T+ +LIK R+ KM+ + + + M+ KG P+ +++I
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHE-SLQLLEYMYAKGLLPDSVTYNTII 663
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EEA +L ++ ++ K +V+ N +L C+ G +E + + +++ L
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD+ + ILI KE AY+ M K P +++ L K SEA
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEA 500
>gi|296088922|emb|CBI38482.3| unnamed protein product [Vitis vinifera]
Length = 368
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G + A + RD + D+V NS++ C+TG + +++ KL
Sbjct: 251 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 310
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I PD T++ LI + KE M+ A+ + G P E
Sbjct: 311 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 350
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR G EA+++ K VV +++ AYC G+M+ + H + +++ A
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P + T+ +LIK R+ KM+ + + + M+ KG P+ +++I
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHE-SLQLLEYMYAKGLLPDSVTYNTII 663
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EEA +L ++ ++ K +V+ N +L C+ G +E + + +++ L
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD+ + ILI KE AY+ M K P +++ L K SEA
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEA 500
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AFC+ G +E K + + K + V NS++ YC ++ + + +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I F K K + A +MH+K P+ SSLI L K S AL
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 121 CLQHVKDIAKDRCAMPFMRKF 141
+ D DR P +R +
Sbjct: 421 ---QLVDQMHDRGVPPTIRTY 438
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA L + +K DVV ++++ +C G + I + K+
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQP 98
I PD TF+IL+ F K+ M +T+ D M K+G +P
Sbjct: 291 IKPDVYTFNILVNAFCKDGK-MKEGKTVFDMMMKQGIKP 328
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC G +A L + K DV N ++ A+C+ G M+ V + +
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ T++ L+ + K A M + G P+ + S +I K++ EA+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 121 CL---QHVKDIAKD 131
L H K+I D
Sbjct: 386 NLFKEMHRKNIIPD 399
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A+++ K +V M+ +C G + ++ K+++
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
PD T+ I+I K+ +A + + +M +G +P +
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ FC+ F+EA L ++ K DVV +S++ ++G + + ++ ++ +
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T++ ++ K A + + KG QP S LI
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+A C+ E K D E K DVV N+++ AYCR G +E +M +
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P T++ +I K Y+ A + +M K G P+
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+CR G EEA +L K K V N+++ C+TG V+ ++ ++
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ + M A R +M +G P+ S+LI L K +AL
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C GC EA +L + K + ++ N+++ YCR G+ + +
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA ++ + + DVV N++L C+ + + ++ E
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494
Query: 61 ISPDYNTFHILIKYFRKE------------------KMYMLAYRTMVDMHKKGHQPEE-- 100
+ PD+ TF LI + K+ K ++ Y T++D KG + E+
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554
Query: 101 ELCSSLI 107
EL + +I
Sbjct: 555 ELWNDMI 561
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + GC ++A + RD + D V+ ++ +CR G M + V ++ E
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
D T++ ++ KEKM A +M ++G P+ ++LI
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G +A + + K D + N+++ + + +M+ ++ K++
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+++++ F ++ A M+ M ++G P+ +SLI
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + + A L E DV+ N +L + R G M+ +M K+ E
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
++PD +T+ LI + A+R +M ++G P+++
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI + ++ + A+
Sbjct: 251 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 310
Query: 87 TMVDMHKKGHQP 98
M M KG +P
Sbjct: 311 LMDSMSGKGLKP 322
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + + G +A L + K DVV N+++ +C+ +ME V + +
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ ++ ILI + A+R +M +KG + C++++
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 611
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+A C+ E K D E K DVV N+++ AYCR G +E +M +
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P T++ +I K Y+ A + +M K G P+
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+CR G EEA +L K K V N+++ C+TG V+ ++ ++
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ + M A R +M +G P+ S+LI L K +AL
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C GC EA +L + K + ++ N+++ YCR G+ + +
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA ++ + + DVV N++L C+ + + ++ E
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
Query: 61 ISPDYNTFHILIKYFRKE------------------KMYMLAYRTMVDMHKKGHQPEE-- 100
+ PD+ TF LI + K+ K ++ Y T++D KG + E+
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658
Query: 101 ELCSSLI 107
EL + +I
Sbjct: 659 ELWNDMI 665
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + GC ++A + RD + D V+ ++ +CR G M + V ++ E
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
D T++ ++ KEKM A +M ++G P+ ++LI
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G +A + + K D + N+++ + + +M+ ++ K++
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+++++ F ++ A M+ M ++G P+ +SLI
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + + A L E DV+ N +L + R G M+ +M K+ E
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
++PD +T+ LI + A+R +M ++G P+++
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 850
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI + ++ + A+
Sbjct: 355 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 414
Query: 87 TMVDMHKKGHQP 98
M M KG +P
Sbjct: 415 LMDSMSGKGLKP 426
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + + G +A L + K DVV N+++ +C+ +ME V + +
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ ++ ILI + A+R +M +KG + C++++
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 715
>gi|47497141|dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
gi|47497588|dbj|BAD19658.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 462
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
PD T++ LI + + + A +M + G P+
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDS 117
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ EEA + D + N+++ +CR GD++ + +KLDE
Sbjct: 435 LIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKG 494
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
S +TF+ILI + + +A + +M KG++P+
Sbjct: 495 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ CR G + + VM ++ E
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++I+I K A M D KG+ P+
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C GG EEA L +A Y DVV N+++ C+ ++ +R++
Sbjct: 157 IRGLCEGGRLEEAVALVESMDA-YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHSE 118
PD T++ +I + K M A + D KG P+ SLI L G + E
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALE 275
Query: 119 ALCLQHVKDIAKD 131
KD+ D
Sbjct: 276 LFNEAQAKDLKPD 288
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA +L +D K D V S++ C GD+E + + +
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD ++ L+K ++ + + A + M +M + G P+ + +I L KM S+A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDA 343
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +A + D K DV N+M+ YC+ ++S + ++ ++
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD T++ ++ K T +M KG +P + LI + K+ EA
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 448
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 49/125 (39%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G + A L + + K N ++ AY +M+ + ++
Sbjct: 470 LIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 529
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ K AY + +M KG P ++ L SEA+
Sbjct: 530 YKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAV 589
Query: 121 CLQHV 125
+ H+
Sbjct: 590 AIIHI 594
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 18 ARDFEAKYDKYDVV----------LLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNT 67
ARDF+ + +DV+ N+++C R G +E + ++ ++ + + P T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439
Query: 68 FHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++I I YF K A T M KG P C++ ++ L +M EA
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G E AK+L +A K D V+ ++L + GD+++ +++
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF IL+ K + + A+ T M K+G P ++LI L + +AL
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 121 CL 122
L
Sbjct: 423 KL 424
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G EEA +L + K + + N ++ Y + GD E+ + +++
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ IL+ A ++ G P+ + +I LGK + EAL
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 121 CL 122
L
Sbjct: 1019 AL 1020
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS CR + + + + + E + D+ +LN++L Y G+ + + V + E
Sbjct: 735 MISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAG 794
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ +T++ LI + + + + +M KKG P+ E SL+ GK + +A
Sbjct: 795 LEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQA 853
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S R G ++A+++ R+ K K D V NS+L A+ + GD ++V V +L
Sbjct: 176 MVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAG 235
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K LA +M G P+ + LI LGKM S+A
Sbjct: 236 FKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDA 294
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA +G ++A + + A + D+ N+M+ + R G + + R+L E
Sbjct: 141 LISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKG 200
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE R ++ + G + + +++I GKM AL
Sbjct: 201 FKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLAL 260
Query: 121 CL 122
L
Sbjct: 261 GL 262
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+A+C+GG +EA L +VV N+++ C++G +E + ++ E +
Sbjct: 248 INAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKV 307
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P T+ IL+ K + + A +V+M+ KG P E + ++LI
Sbjct: 308 NPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALI 353
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 40/79 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G ++ + + ++ + + + + M+ YC+ G+ + ++ ++
Sbjct: 703 LIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG 762
Query: 61 ISPDYNTFHILIKYFRKEK 79
ISPD T+ +L K + KE
Sbjct: 763 ISPDTVTYTVLQKGYCKEN 781
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EEAK + + + +V +++ YC+ G M+ + +++++
Sbjct: 668 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 727
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ T+ I+I + K A + + +M G P+
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPD 766
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G EA L K + ++V N+++ YCR+GDM + K+
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I PD +++ LI + KE A+ + +M K+G Q
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQ 674
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+CR G EEA QL F ++ + ++ N++L C+ G + V+ ++ +L
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P+ T++ L+ + + A +M ++G P+ SSLI L +
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A C+ FE D E K D+V N+++ AYCR G +E ++
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++ K Y A +++M + G P ++L+ + + EA
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA- 381
Query: 121 CLQHVKDIAKDRCAMPFMRKF 141
Q + D R +P + F
Sbjct: 382 --QEIFDEMSRRGVLPDLVSF 400
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + E+A L + E + +++++ N +L +C G M+ V+RK+ E+
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I+PD T+ LI + A+R +M ++G P++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G +A ++ + A+ DVV N+ L C+ + ++ E
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD+ TF LI+ + K+ A M + +P++ ++LI
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G ++A L K D V N+++ +C+ G+M + +
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD+ ++ ++ F + A M +KG +P C++LI
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S FCR G A ++ ++ E + K V ++ + R+ +ME I + ++EL
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +LI F + A R M +K +P E + +++I LG + S
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI--LGYCKEGSSYR 496
Query: 121 CLQHVKDIAKDRCA 134
L+ +K++ + A
Sbjct: 497 ALKLLKEMEEKELA 510
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +A L RD +++ +V N ++ +CR GD ++++++E
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T+ ILI F + A + + M + G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 51/104 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G EA +L + K + + V+ N+M+ YC+ G + ++++++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
++P+ ++ +I+ KE+ A R + M G P + S
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR EA ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T++IL+ F ++ A + + +M ++G +P + + LI
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G EEA + ++ + D+V NS++ CR G +E + + RKL
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 61 ISPDYNTFHILIKYFRK 77
I PD TF+ L+ + K
Sbjct: 665 IPPDTVTFNTLMSWLCK 681
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISAFC+ EA ++ R+ K K DV NS++ C +++ + ++R +
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + T++ LI F + A + + +M +G +E +SLI
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF R G +EA++L + + D + NS++ CR G+++ + K+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P + +ILI + M A +M +G P+ +SLI
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DEL 59
+++ C+ G + AK D + K ++V+ N+++ + G ++ V+ +
Sbjct: 328 LMNGLCKIGRVDAAK----DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T++ LI + KE + LA + DM KG +P
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G A ++ D K K +V ++ +C+ G ++ +V+ ++
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ F+ LI F KE A +M +KG +P+ +SLI L ++ AL
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 121 CL 122
L
Sbjct: 515 WL 516
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +A + A DVV N+++ A+CR GD+E + ++R+
Sbjct: 387 VIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRE 446
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ LI F M+A +V+M +GH P+ +LI L EAL
Sbjct: 447 LEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEAL 506
Query: 121 CLQHVKDIAKDRCAMP 136
V++ +R MP
Sbjct: 507 ---MVREKMAERQVMP 519
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
M+ C G EE ++L EA++ + V N ++ YCR GD+ + ++ +++
Sbjct: 282 MVRGLCLEGRVEEGRRL---IEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEME 338
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
I P T+ +I + ++ + +M ++G P ++ +++I+ L K R+ S
Sbjct: 339 MKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSAS 398
Query: 118 EALCL 122
+AL +
Sbjct: 399 QALAV 403
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R +A+++ E K D+V N+M+ YC++G M + M + ++
Sbjct: 562 LIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVG 621
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ LI + K+ A R + DM K+ +P +SLI
Sbjct: 622 CIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLI 668
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV L +++ +G ++ + V K+ E
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K++M A +V+M ++ QP++ + ++LI
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLI 563
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+A C+ E K D E K DVV N+++ AYCR G +E +M +
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P T++ +I K Y+ A + +M K G P+
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+CR G EEA +L K K V N+++ C+TG V+ ++ ++
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ + M A R +M +G P+ S+LI L K +AL
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C GC EA +L + K + ++ N+++ YCR G+ + +
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA ++ + + DVV N++L C+ + + ++ E
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 61 ISPDYNTFHILIKYFRKE------------------KMYMLAYRTMVDMHKKGHQPEE-- 100
+ PD+ TF LI + K+ K ++ Y T++D KG + E+
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397
Query: 101 ELCSSLI 107
EL + +I
Sbjct: 398 ELWNDMI 404
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + GC ++A + RD + D V+ ++ +CR G M + V ++ E
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
D T++ ++ KEKM A +M ++G P+ ++LI
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 349
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G +A + + K D + N+++ + + +M+ ++ K++
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+++++ F ++ A M+ M ++G P+ +SLI
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + + A L E DV+ N +L + R G M+ +M K+ E
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
++PD +T+ LI + A+R +M ++G P+++
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 589
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI + ++ + A+
Sbjct: 94 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 153
Query: 87 TMVDMHKKGHQP 98
M M KG +P
Sbjct: 154 LMDSMSGKGLKP 165
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + + G +A L + K DVV N+++ +C+ +ME V + +
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ ++ ILI + A+R +M +KG + C++++
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 454
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C G EA+ L D A+ + +VV+ N+++ YC GD+E + V ++D
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242
Query: 61 ISPDYNTFHILIKYF---RKEKMYMLAYRTMVD 90
SP+ T+ LI F RK M+ + MVD
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ EA+ L K K + ++ S++ C+ G + +M+ L
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD +T+ LI ++K A + DM +KG QP
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A L + E K K D+++ +++ +C G + ++R + +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD F LI F KE A +M ++G P+ +SLI K +A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA- 371
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
H+ D+ + P +R F I
Sbjct: 372 --NHMLDLMVSKGCGPNIRTFNIL 393
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G E AK+L ++ ++ + D+V +L C G+ E + + K+++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++I+I A+ + KG +P+ + + +I L K + SEA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G EA++L ++ + D V S++ +C+ ++ H++ +
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKMRAHS 117
P+ TF+ILI + K + M +G + ++LI LGK+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 118 E 118
E
Sbjct: 443 E 443
>gi|222623826|gb|EEE57958.1| hypothetical protein OsJ_08692 [Oryza sativa Japonica Group]
Length = 180
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T++ LI + + + A +M G +P
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLPFGDRP 115
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEA +L +FEA D V +++ AYC++G+M+ +++++
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P TF++L+ F M + + M KG P +SL+
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G EA +L + K + D V ++ YC+ G M+ V + +
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI KE A + +M K G QP +S++ L K EA+
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 121 CL 122
L
Sbjct: 955 KL 956
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA L E K DV+ ++++ YCR G+++ V ++ +
Sbjct: 695 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P+ + +I + A +M ++G P+ + ++LI G +RA S
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814
Query: 118 EALCLQHVKDIAKD 131
+ H +DI D
Sbjct: 815 KFFYEMHSRDITPD 828
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G A + + ++ DV+ +++ +C+ GDM + ++
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD TF LI + K A+R M + G P ++LI L K
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ ++L AK + NS++ YC ++++ + + +
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ L+K K + A+ +M KG S LI K + EA
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 1128
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A +L + + ++ NS++ C++G++E + ++ + +
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++ D T+ L+ + K A + +M KG QP
Sbjct: 965 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 56/112 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +A+++ + V+ N+++ YC+ GD+E + +++
Sbjct: 334 LLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRL 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I PD+ T++ LI K + A+ +++M K G P E ++LI G+
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 51/100 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +EA++L + A + D + +++ C+ GDMES + + R++ E
Sbjct: 288 LINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEG 347
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I D F +LI ++ A R + DM G +P++
Sbjct: 348 IELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDD 387
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A L + E K K D+++ +++ +C G + ++R + +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD F LI F KE A +M ++G P+ +SLI K +A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA- 371
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
H+ D+ + P +R F I
Sbjct: 372 --NHMLDLMVSKGCGPNIRTFNIL 393
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G E AK+L ++ ++ + D+V +L C G+ E + + K+++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++I+I A+ + KG +P+ + + +I L K + SEA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G EA++L ++ + D V S++ +C+ ++ H++ +
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKMRAHS 117
P+ TF+ILI + K + M +G + ++LI LGK+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 118 E 118
E
Sbjct: 443 E 443
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ R G F+EA + R E D+V N++L +Y + G + ++ ++ +
Sbjct: 337 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 396
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI + K + A D+ K G QP+ L S+L+ K + EAL
Sbjct: 397 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 456
Query: 121 CL 122
L
Sbjct: 457 AL 458
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAK--YDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I A+ R G +A ++ FEA K ++V+ N+++ A + GD + + + R++ E
Sbjct: 162 LICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLE 218
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SPD TF+ LI + + R +M ++G ++ ++LI
Sbjct: 219 QGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLI 267
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G +A L +D + + DVVL ++++ C+ G + + ++ ++ +
Sbjct: 407 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 466
Query: 61 ISPDYNTFHILI-----------KYFRKEKMYMLAYRTMV 89
I P+ T++ L+ K F K + ++L TM+
Sbjct: 467 IRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTML 506
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ R G F+EA + R E D+V N++L +Y + G + ++ ++ +
Sbjct: 336 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 395
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI + K + A D+ K G QP+ L S+L+ K + EAL
Sbjct: 396 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 455
Query: 121 CL 122
L
Sbjct: 456 AL 457
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAK--YDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I A+ R G +A ++ FEA K ++V+ N+++ A + GD + + + R++ E
Sbjct: 161 LICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLE 217
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SPD TF+ LI + + R +M ++G ++ ++LI
Sbjct: 218 QGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLI 266
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G +A L +D + + DVVL ++++ C+ G + + ++ ++ +
Sbjct: 406 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465
Query: 61 ISPDYNTFHILI-----------KYFRKEKMYMLAYRTMV 89
I P+ T++ L+ K F K + ++L TM+
Sbjct: 466 IRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTML 505
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G EA ++ R+ VV N+++ +C TG ME I V+ + E
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SPD ++ ++ F + A R +M +KG +P+ SSLI + R EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G E+A + D + K DVV +++L +CR+ D++ + V R++ E
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ LI+ F +++ A +M + G P+E ++LI
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G F +A + + V+ S++ + C+ G+M + + ++
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ L+ F ++ AYR + +M+ G P ++LI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ ++ +L R K + +++ N ++ CR G M+ V V+ +++
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
S D T++ LIK + KE + A +M + G P +SLI
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S FCR +EA ++ R+ K K D + +S++ +C + + ++ +
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI + E A + +M +KG P+ S LI L K EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G + A L E K +VV N+++ YC+ ++ ++R +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ +++++I R+ +M +++ + +M+++G+ +E ++LI
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSF-VLTEMNRRGYSLDEVTYNTLI 317
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC +EA L + D +++ AYC GD+E + + ++ E
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +LI K+ A R ++ + + P + +LI
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G EEA +L + + + DVV +++ YC G + ++ ++ E
Sbjct: 389 VVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERG 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I PD T++IL+ F + + A + + +G +P + +I L GK++ +
Sbjct: 449 IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK-EA 507
Query: 118 EAL-------CLQHVKDIAKDRCAMPFMRKFF 142
EA CL++ + C F RK +
Sbjct: 508 EAFLNTLEDKCLENYSAMVDGYCKANFTRKAY 539
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ +CR C EA+ + D + + K DV+ +L + +T +++ I++ ++
Sbjct: 603 MINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARG 662
Query: 61 ISPDYNTFHILI-------------KYFRKEKMYMLAYRTMVDMHKKG 95
+ PD T+ L+ ++ + K+++LA V + + G
Sbjct: 663 LQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKLFILAQPRGVRLEEMG 710
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFCR G + A+ + + DV+ M+ YCR + + + E
Sbjct: 568 LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG 627
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD T+ +++ K A +M +G QP+
Sbjct: 628 IKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPD 666
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 15 KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKY 74
+ LA D E + ++ ++ A+CR GDM+ V L E I+PD T+ ++I
Sbjct: 552 RMLALDVEP-----NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMING 606
Query: 75 FRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQ 123
+ + A DM ++G +P+ +I + + HS+ LQ
Sbjct: 607 YCRVNCLREARDIFNDMKERGIKPD------VITYTVVLDGHSKTNNLQ 649
>gi|321258408|ref|XP_003193925.1| hypothetical protein CGB_D8240C [Cryptococcus gattii WM276]
gi|317460395|gb|ADV22138.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 778
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 543 NLITINTVLRHYAREANIEAMSALFSKAGELGLEPDVVTYTTLVQGLLRARRLDLAKGAM 602
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK------MRAHSEALCLQHVKDI 128
M K+G P E +CS LI L K + E L L H K++
Sbjct: 603 DAMQKQGIVPNERMCSMLIADLAKPGTRVGLEHAEEMLKLMHQKNM 648
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ +A + DVV N+M+ +CR GD+ + ++R+
Sbjct: 192 VINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRG 251
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ LI F M+A +V+M +GH P+ +LI L ++AL
Sbjct: 252 LEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL 311
Query: 121 CLQHVKDIAKDRCAMP 136
V++ +R MP
Sbjct: 312 I---VREKMAERQVMP 324
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
M+ C G EE + L EA++ + V N ++ YCR GD+ + ++ +++
Sbjct: 87 MVRGLCLEGRVEEGRGL---IEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEME 143
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
I P T+ +I + ++ + +M +G P ++ +++I L K R+ S
Sbjct: 144 TKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSAS 203
Query: 118 EA 119
+A
Sbjct: 204 QA 205
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + D++ L +++ +G + + V K+ E
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K++M A + +M ++ QP++ + ++LI
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLI 368
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R +A+++ E K D+V N M+ YC+ G M+ + M + +
Sbjct: 367 LIDGFVRSDKLSDARKIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ L+ + K+ + R + DM K+ +P +SLI
Sbjct: 426 CIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLI 472
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+F R G EEA ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 325 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+SPD T+ LI+ F K +A R +M +G P
Sbjct: 385 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSP 422
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + C G EA L K D V+ N++L A + + + K+ +
Sbjct: 255 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 314
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SPD +++ILI F + A + ++ +P+ +SLI LGK
Sbjct: 315 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGK 366
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ N ++ ++ R G +E + + +L+ + PD +F+ LI K A+
Sbjct: 318 DIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRF 377
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK 112
+M ++G P+ S+LI GK
Sbjct: 378 KEMREEGLSPDVVTYSTLIECFGK 401
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G EEA +L + + + DVV +++ YC G + ++ ++ E
Sbjct: 408 VVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERG 467
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I PD T++IL+ F + + A + + +G +P + +I L GK++ +
Sbjct: 468 IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK-EA 526
Query: 118 EAL-------CLQHVKDIAKDRCAMPFMRKFF 142
EA CL++ + C F RK +
Sbjct: 527 EAFLNTLEDKCLENYSAMVDGYCKANFTRKAY 558
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 1 MISAFCRGGCFEEA-----KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK 55
++S+ C G +++A + LA D E + ++ ++ A+CR GDM+ V
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEP-----NQIMYGKLIGAFCRDGDMKRAQLVFDM 633
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
L E I+PD T+ ++I + + A DM ++G +P+
Sbjct: 634 LVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPD 677
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFCR G + A+ + + DV+ M+ YCR + + + E
Sbjct: 614 LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG 673
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +++ K + M R++ KG + E+ S + +M + +
Sbjct: 674 IKPDVITYTVVLDGHSKVNLKMA--RSL--QFSKGSEEEKMDASPFWSEMKEMGIKPDVV 729
Query: 121 C 121
C
Sbjct: 730 C 730
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCRGG E A ++ ++ + + D V ++++C C+ G + +R++
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD T+ +++ F K+ ++ + +M GH P
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G A+ + + + D + +++ +CR GD+E+ + + +++D+
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I D F L+ KE + A R + +M + G +P++
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G +A+++ + + + VV N+++ YC+ G+++ + ++++
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ LI KE A+ +M K+G P + + ++LI
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
>gi|405122752|gb|AFR97518.1| hypothetical protein CNAG_04700 [Cryptococcus neoformans var.
grubii H99]
Length = 760
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 525 NLITINTVLRHYAREANIEAMSALFNKAGELKLQPDVVTYTTLVQGLLRARRLDLAKGAM 584
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK------MRAHSEALCLQHVKDI 128
M K+G P E +CS LI L K + E L L H K++
Sbjct: 585 DAMQKQGIVPNERMCSMLIADLAKPGTRVGLEHAEEMLKLMHQKNM 630
>gi|108711657|gb|ABF99452.1| Calreticulin family protein, expressed [Oryza sativa Japonica
Group]
Length = 1111
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR +EEA+ L + + VV N+++ +Y R GD++ + ++ +++E
Sbjct: 223 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 283 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 342
Query: 114 RAHSEALCLQHVKDI 128
HS A+ + V ++
Sbjct: 343 ELHSHAIKVGSVNNV 357
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + + G +A +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 394 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 454 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 492
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 216 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 275
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P+ +SL+ M EAL
Sbjct: 276 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEAL 307
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G E A +L + E+ K D N ++ G + I + R++ L
Sbjct: 429 MISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALL 488
Query: 61 ISPDYNTFHILIKYF 75
PDY T +I F
Sbjct: 489 RRPDYITILSIIPAF 503
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + G +EA ++ + +V N++L +C +G ME I ++R ++
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SPD ++ +I F + + A++ +M +KG P+ SSLI L + R +EA
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEA 502
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G EEA L R E K DVV ++++ +CR +++ + ++ E
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ +++ A +M K P+E +SLI K +EAL
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538
Query: 121 CL 122
L
Sbjct: 539 NL 540
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G EE + + + K D V N+++ YC+ G+ + + ++
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI K A MH +G +P +SLI
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLI 385
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ +EA +L R + + +++ N ++ CR G +E V+ ++D
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+PD T++ L+ + K + A +M + G P+ +SLI
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLI 350
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G F +A L + DVV S++ C+ G++ + ++
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T+ LI F ++ AYR +M + G P
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP 411
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G E + + E +VV N+++ AYC+ ++ ++R +
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++++I + + +M +KG P+ ++L+ K+ +AL
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328
Query: 121 CL 122
L
Sbjct: 329 VL 330
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + I ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + I ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G F++A L + E K K DVV +S++ C G + ++R++
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD TF LI F KE + A +M +G P+ +SLI
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 386
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G EAK+L + + D + NS++ +C+ E+ +H ++ +L
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK----ENCLHEANQMFDLM 405
Query: 61 IS----PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKM 113
+S PD T+ ILI + K K R ++ KG P ++L+ GK+
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465
Query: 114 RAHSE 118
A E
Sbjct: 466 NAAKE 470
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A L K K DVV N M+ C+ G + + RK+ E
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584
Query: 61 ISPDYNTFHILIK 73
+PD T++ILI+
Sbjct: 585 CTPDDFTYNILIR 597
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ C EA Q+ +K + D+V + ++ +YC+ ++ + + R++
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T++ L+ F + A +M +G P
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +++ ++ R+ + DVV ++++ + + G + + ++
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T++ LI F KE A + M KG +P+ S LI
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 421
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS++ R G ++A L D A K DV+ NS++ + GD++ + +++ E
Sbjct: 469 MISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKG 528
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ F K +A +DM +G P
Sbjct: 529 YGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPN 567
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C G EA L K DV + N + A + + + + K+
Sbjct: 399 MLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANG 458
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD T++I+I + + + A DM+ +P+ +SLI LGK EA
Sbjct: 459 IAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEA 517
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + I ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 35/155 (22%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ R G EE L A+ K DVV+ +S++ AY R GD+ I V ++ +
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375
Query: 61 ISPDYNTFHILIKYFRKEKMYM------------------LAYRTMVD------------ 90
ISP+ T+ ILI + + L Y +++D
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435
Query: 91 -----MHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M +KGH P+ +CS LI L + EAL
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F R GC E +L R+ + D+V N+M+C YC I + L
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF ILI + K+ A M ++G +P S LI
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702
>gi|58260196|ref|XP_567508.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116536|ref|XP_772940.1| hypothetical protein CNBJ2160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255560|gb|EAL18293.1| hypothetical protein CNBJ2160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229558|gb|AAW45991.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 760
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 525 NLITINTVLRHYAREANIEAMSALFSKAGELKLQPDVVTYTTLVQGLLRARRLDLAKGAM 584
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK------MRAHSEALCLQHVKDI 128
M K+G P E +CS LI L K + E L L H K++
Sbjct: 585 DAMQKQGIVPNERMCSMLIADLAKSGTRVGLEHAEEMLKLMHQKNM 630
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA+ L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK K + LA + +M KG P++ SLI +G +
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 56/112 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I R +EA L + DV++ N+M+ +C G++E +++++D +
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 524
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD TF+ L++ +E A + +M ++G +P+ ++LI G+
Sbjct: 525 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 576
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C G E A L ++ + K D V N+++ CR G +E ++ ++
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD+ +++ LI + + A+R +M G P
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EEA L + V N+++ YC GD+E ++ +
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P +T+++L+ E A + +M KKG P+
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 423
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA+ L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK K + LA + +M KG P++ SLI +G +
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I R +EA L + DV++ N+M+ +C G++E +++++D +
Sbjct: 389 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKS 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD TF+ L++ +E A + +M +G +P+ ++LI G+
Sbjct: 449 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGR 500
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C G E A L ++ + K D V N+++ CR G +E ++ ++
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD+ +++ LI + + A+ +M G P
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNP 521
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EEA L + V N+++ YC GD+E ++ +
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P +T+++L+ E A + +M KKG P+
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 347
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G F++A L + E K K DVV +S++ C G + ++R++
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD TF LI F KE + A +M +G P+ +SLI
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G EAK+L + + D + NS++ +C+ E+ +H ++ +L
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK----ENCLHEANQMFDLM 376
Query: 61 IS----PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKM 113
+S PD T+ ILI + K K R ++ KG P ++L+ GK+
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 114 RAHSE 118
A E
Sbjct: 437 NAAKE 441
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A L K K DVV N M+ C+ G + + RK+ E
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 61 ISPDYNTFHILIK 73
+PD T++ILI+
Sbjct: 556 CTPDDFTYNILIR 568
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ C EA Q+ +K + D+V + ++ +YC+ ++ + + R++
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T++ L+ F + A +M +G P
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +++ ++ R+ + DVV ++++ + + G + + ++
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T++ LI F KE A + M KG +P+ S LI
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G +EA L D + V+ N +L YCR GD+E +++ E
Sbjct: 378 LINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD +T+ IL+ RK + + +M KG QP+
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPD 476
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 3/145 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G EA+ + V + AYCR G++ S +K+ E
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI + LAY+ +M ++G P + + LI K EA+
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 121 CL---QHVKDIAKDRCAMPFMRKFF 142
L H I D C + K F
Sbjct: 673 RLYSEMHQHGIHPDHCTHNALFKGF 697
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I R G E A+ + A D++ NS++ YC+ G+++ + + L
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++P T++IL+ + + A R +M ++G QP+
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPD 441
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA+ L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK K + LA + +M KG P++ SLI +G +
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 56/112 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I R +EA L + DV++ N+M+ +C G++E +++++D +
Sbjct: 443 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 502
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD TF+ L++ +E A + +M ++G +P+ ++LI G+
Sbjct: 503 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 554
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C G E A L ++ + K D V N+++ CR G +E ++ ++
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD+ +++ LI + + A+R +M G P
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EEA L + V N+++ YC GD+E ++ +
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P +T+++L+ E A + +M KKG P+
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 401
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EEA +L D + K D+ N++L AYC G ME H++ ++
Sbjct: 508 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 567
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD ++ +I K K A + ++ +G +P + ++LI G+
Sbjct: 568 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGR 619
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A C+ G + ++ + + VV N ++ A C++G +E + ++++
Sbjct: 227 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++P TF ILI + + + + +M + G P E + + LI
Sbjct: 287 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 333
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 40/99 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +EA ++ + K + D + N M+ C+ ME I + +
Sbjct: 473 LIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 532
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD TF+ L+ + + + M +G QP+
Sbjct: 533 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPD 571
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G +A +L + K K V N + A C+ G+ME ++ + +
Sbjct: 332 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 391
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMV-DMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ + + + + ++ +M +G +P + L ++ + L K H EA
Sbjct: 392 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 451
Query: 120 L 120
+
Sbjct: 452 V 452
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G +E +L K + DVV+ N+++ ++C GDME +M ++++
Sbjct: 330 LIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKR 389
Query: 61 ISPDYNTFHILIKYF----RKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLI 107
I PD T++ L++ F R ++ RT++D M K+G QP+ ++LI
Sbjct: 390 IPPDDMTYNTLMRGFCLLGRLDEA-----RTLIDEMTKRGIQPDLVSYNTLI 436
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++ C GG E A ++ + E K D + N+++ +C G ++ ++ ++ +
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD +++ LI + + A R +M KG P ++LI L K+R +A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA 483
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC G +EA+ L + + + D+V N+++ Y GD++ + V ++ +
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+P T++ LI+ K + A M +M KG P++ SLI L
Sbjct: 460 FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + + G ++ + ++ + DV+ NS++ +C++G + + R++ +
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG 233
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ ++ L+ F KE M A + VDM + GH P E +SL+
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLV 280
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G E AK L E K ++V N+++ +C+ +M+ V+ +++++ E
Sbjct: 524 MIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
SPD +T I++ K++ Y
Sbjct: 584 FSPDASTISIVVDLLSKDEKY 604
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +E AK L + + +VV N ++ A C+ G ME H+++ + +
Sbjct: 279 IIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
SPD T++ LI F E A V M KG
Sbjct: 339 ESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G ++ K+L + + + DVV +S++ C TG E + ++ +
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF++LI K A + M ++G P+ ++LI +
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI----------DGF 353
Query: 121 CLQHVKDIAKD 131
CL+ D A+D
Sbjct: 354 CLEGRIDDARD 364
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G ++A+ L E+K + D V N ++ YC++G M + R++
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ L+ +E A+ +M PE + L+ L K SEA+
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468
Query: 121 CLQH 124
L H
Sbjct: 469 ELFH 472
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EEA L + + + D N+++ +C G ++ + ++
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
I D ++++LI + K + A + +M K P ++L +F GK+R
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433
Query: 118 EALCLQHVKDIAKDRC 133
V D+ + C
Sbjct: 434 NLFGEMKVHDLTPESC 449
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 51/114 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G EAK+L R+ K V+ N++L R G + ++ ++
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
++P+ T++IL+ K A + QP ++ + LI L K R
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKAR 497
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ E A++L + + +V+ M+ C++G +E+ + ++E
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ L++ F + + +M +K P+ S ++ L K + E L
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYL 608
Query: 121 CL 122
L
Sbjct: 609 HL 610
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G + A +L + ++ K D+V N++L C E +M K+ +
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ +I + ++ + + A+ M +KG P S++I L K +AL
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246
>gi|218193953|gb|EEC76380.1| hypothetical protein OsI_13992 [Oryza sativa Indica Group]
Length = 822
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR +EEA+ L + + VV N+++ +Y R GD++ + ++ +++E
Sbjct: 186 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 245
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 246 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 305
Query: 114 RAHSEALCLQHVKDI 128
HS A+ + V ++
Sbjct: 306 ELHSHAIKVGSVNNV 320
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + + G +A +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 357 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 417 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 455
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 179 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 238
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P+ +SL+ M EAL
Sbjct: 239 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEAL 270
Score = 35.0 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G E A +L + E+ K D N ++ G + I + R++ L
Sbjct: 392 MISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALL 451
Query: 61 ISPDYNTFHILIKYF 75
PDY T +I F
Sbjct: 452 RRPDYITILSIIPAF 466
>gi|449457967|ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A+C+ G EEA+ + E +++ N+++ Y + +M++ + +
Sbjct: 310 MLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSG 369
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA--HSE 118
+ PD T+ +I+ + + Y +A ++ ++G+ P SS +F L ++A E
Sbjct: 370 VEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPN----SSNLFTLINLQAKHEDE 425
Query: 119 ALCLQHVKDIAKDRC 133
A L+ + D+ K C
Sbjct: 426 AGTLKTLNDMLKIGC 440
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA CR G + A + D + D++ NS+L + C+ G+ + +++ KL E+
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ +++ L + A +++M G P+E +SLI
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLI 468
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G +E ++L D K + + + ++++ A CR G ++ +V++ + E A++PD ++
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
LI +E LA + DM GH P+ +S++ L K EAL
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL 411
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F E+A Q+ E K+ K DV N+++ +C+ ++ V+ ++ +
Sbjct: 118 LIKGFFNMKKIEKAIQVMEILE-KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRG 176
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T++ILI F LA R M + K +P
Sbjct: 177 FEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKP 214
>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
Length = 1487
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L D + K D V ++++ YC+ ME+ + + R++
Sbjct: 1213 LIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNG 1272
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+SP+ T++I+++ + A V + K+G Q E C+ ++ L K EA
Sbjct: 1273 VSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKNNLTGEAL 1332
Query: 120 -----LCLQHVK 126
LCL VK
Sbjct: 1333 QMFQNLCLMDVK 1344
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS C F + + + + E K D+ +LN++L Y G+ + V R + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 61 ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + FR E+ + L + +M K+G P+ + SL+ K
Sbjct: 951 LEPDEDTYNTLIVMYCRSFRPEEGFTL----LNEMGKRGLTPKLQSYKSLLAASAKAELR 1006
Query: 117 SEA 119
+A
Sbjct: 1007 EQA 1009
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S R G EEA++L R+ K D + NS+L A+ + G+++ V H +L +
Sbjct: 334 MVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ T++ +I + K LA +M G P+ + +I LGKM +EA
Sbjct: 394 FKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEA 452
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA + E+A + D A + D+ N+M+ + R G E + R+L E
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
PD T++ L+ F KE T + K G + E +++I GKM
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKM 411
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+A + GC L FE + + DV+ N+++ A ++ ++E + V +
Sbjct: 262 LINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIA 321
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T++ ++ + A R ++ +KG P+ +SL++ K
Sbjct: 322 SECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAK 375
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EEA +L D K K D + NS++ AYC G ME +H++ ++
Sbjct: 518 MIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEG 577
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD ++ +I + K K A + ++ G +P + ++LI G+
Sbjct: 578 VQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGR 629
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G F EA +L + +K K V N + A C+ G+ME ++ ++
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401
Query: 61 ISPDYNTFH-ILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ ++ R + +M K+G +P + L ++ L + R H EA
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461
Query: 120 L 120
+
Sbjct: 462 V 462
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
MI A C+ G ++ ++ D V N ++ A C++G ++ I + +++E
Sbjct: 235 MIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEE 294
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++P TF ILI ++ + + +M G P E +C+ LI
Sbjct: 295 SRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELI 343
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+ C G +E +QLA FE Y N+++ C+ D + + +M ++ E
Sbjct: 221 VISSMCEVGMVKEGRQLAERFEPVVSVY-----NALINGLCKERDYKGGVELMSEMVEKG 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISP+ ++ LI LA+ + M K+G P SSL+
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLV 322
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 5 FCRGGCFEEA---KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
F RG F+ Q+ R F + + VV N+++ +C G+++ + V ++E+
Sbjct: 326 FVRGTTFDALDMWNQMIRGFGLQPN---VVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGC 382
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
SP+ T+ LI F K A M G P + +S++ L + EA
Sbjct: 383 SPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAES 442
Query: 122 LQHVKDIAKDRCA 134
L ++ ++K+ CA
Sbjct: 443 L--IEIMSKENCA 453
>gi|30103011|gb|AAP21424.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|222626012|gb|EEE60144.1| hypothetical protein OsJ_13038 [Oryza sativa Japonica Group]
gi|374087691|gb|AEY82646.1| chloroplast ALBL [Oryza sativa Japonica Group]
Length = 859
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR +EEA+ L + + VV N+++ +Y R GD++ + ++ +++E
Sbjct: 223 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 283 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 342
Query: 114 RAHSEALCLQHVKDI 128
HS A+ + V ++
Sbjct: 343 ELHSHAIKVGSVNNV 357
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + + G +A +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 394 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 454 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 492
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 216 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 275
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P+ +SL+ M EAL
Sbjct: 276 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEAL 307
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G E A +L + E+ K D N ++ G + I + R++ L
Sbjct: 429 MISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALL 488
Query: 61 ISPDYNTFHILIKYF 75
PDY T +I F
Sbjct: 489 RRPDYITILSIIPAF 503
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS C F + + + + E K D+ +LN++L Y G+ + V R + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 61 ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + FR E+ + L + +M K+G P+ + SL+ K
Sbjct: 951 LEPDEDTYNTLIVMYCRSFRPEEGFTL----LNEMGKRGLTPKLQSYKSLLAASAKAELR 1006
Query: 117 SEA 119
+A
Sbjct: 1007 EQA 1009
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S R G EEA++L R+ K D + NS+L A+ + G+++ V H +L +
Sbjct: 334 MVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ T++ +I + K LA +M G P+ + +I LGKM +EA
Sbjct: 394 FKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEA 452
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA + E+A + D A + D+ N+M+ + R G E + R+L E
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
PD T++ L+ F KE T + K G + E +++I GKM
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKM 411
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+A + GC L FE + + DV+ N+++ A ++ ++E + V +
Sbjct: 262 LINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIA 321
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T++ ++ + A R ++ +KG P+ +SL++ K
Sbjct: 322 SECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAK 375
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G F+EA+++ K K DVV N+M+ +CR+G ++ + M +++E
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I + K++ A + M K +P +SLI
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G E ++L K ++V N+++ YC+ GD+E+ V ++L
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P TF +I F KE ++ + R + ++ ++G
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FCR G +EA ++ D ++++ Y + DM + I + R +++
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ T+ LI F + + +A T +M + P ++LI L K
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA C+ G F+EAK+ + K D VL ++ + YC+ G + V+R +++
Sbjct: 525 LVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKG 584
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T+++LI FR++ + + +M KG P +SLI
Sbjct: 585 CKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLI 631
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G + +++ ++ DVV S+L AYC G+ + ++ ++ +
Sbjct: 362 IVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKG 421
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+++L++ K A R + M +KG+ + C+ +I + L
Sbjct: 422 CAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIII----------DGL 471
Query: 121 CLQHVKDIAKD 131
C + D+A D
Sbjct: 472 CRNNKLDMAMD 482
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++V+ N+++ +CR G ++ ++ ++ + ++P+ TF+ I K + AYR
Sbjct: 211 NLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIF 270
Query: 89 VDMHKK 94
DM +K
Sbjct: 271 NDMQEK 276
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLD 57
+++ FCR G +EA++L + +VV N+ + A C+ G D + + M++
Sbjct: 218 VVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKW 277
Query: 58 ELAIS-PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
E + PD TF +++ F + M A R +VD+ + G
Sbjct: 278 ERGLPRPDQVTFDVMLSGFCEAGMVDEA-RVLVDIMRCG 315
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A CR G E A+ + D DVV N++L A+CR +++ V+R++ E +
Sbjct: 17 LAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMREAGV 76
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T++ LI + + M A +M + G P+
Sbjct: 77 WPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPD 114
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I C+ G +EA L R ++ + V NS++ +CR G M+ ++++ ++ E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T+ L+ F K AY + M +KG P+ +SL+ L + S+A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 120 L 120
+
Sbjct: 311 V 311
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR G +EA L DVV +++ +C+ ++ ++ ++
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD TF L+ +E A + +M +K P
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I C+ G +EA L R ++ + V NS++ +CR G M+ ++++ ++ E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T+ L+ F K AY + M +KG P+ +SL+ L + S+A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 120 L 120
+
Sbjct: 311 V 311
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR G +EA L DVV +++ +C+ ++ ++ ++
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD TF L+ +E A + +M +K P
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G EEA + ++ + D+V NS++ CR G +E + + RKL
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658
Query: 61 ISPDYNTFHILIKYFRK 77
I PD T++ L+ + K
Sbjct: 659 IPPDTVTYNTLMSWLCK 675
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +EA L + A K + V N ++ A+C+ + + + R++
Sbjct: 424 LVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483
Query: 61 ISPDYNTFHILI 72
PD TF+ LI
Sbjct: 484 CKPDVYTFNSLI 495
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISAFC+ EA ++ R+ K K DV NS++ C +++ + ++R +
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + T++ LI F + A + + +M +G +E +SLI
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF R G +EA++L + + D + NS++ CR G+++ + K+
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P + +ILI + M A +M +G P+ +SLI
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 635
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G A ++ RD K K +V ++ +C+ G ++ +++ ++
Sbjct: 389 LIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADG 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ F+ LI F KE A +M +KG +P+ +SLI L ++ AL
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508
Query: 121 CL 122
L
Sbjct: 509 WL 510
Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I F G ++AK + D Y DV NS++ Y + G + + V+R +
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ ++ IL+ F K AY + +M G +P
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKP 451
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +EA +L + K + D N + +CR+ E ++ ++E
Sbjct: 369 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+ +F ILI + KE+ + A R M KKG P
Sbjct: 429 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ F EA++L + E K VV N+ + YC+ G ME ++ ++ E
Sbjct: 439 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 498
Query: 61 ISPDYNTFHILI 72
+ PD T+ LI
Sbjct: 499 LMPDTYTYTSLI 510
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 3 SAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
S FCR EEAK+L E + +VV + ++ YC+ + + + +++ +
Sbjct: 406 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 465
Query: 63 PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T++ I+ + K+ AY+ + +M ++G P+ +SLI
Sbjct: 466 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 510
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 58/112 (51%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I +C+ G EEA +L + + + D S++ +G+++ + + ++ +L +
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ + T+ ++I K+ A++ +M+K+G P++ + SSLI L K+
Sbjct: 535 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 586
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G AK L + K K V+ N++L Y D+ V ++ +++
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + T+ +LI+++ + A + +M KKG +P+ + +S+I
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSII 300
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+C G E A+QL D A + D + ++ YC G ++ +M +++
Sbjct: 245 VLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAG 304
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I+ KE + A +M G+ P+ LC+ ++
Sbjct: 305 VKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAGYVPDTPLCAKVV 351
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA+ L + E + ++ NS++ C G+++ V + E
Sbjct: 385 LIYWLCKNGMVQEARGLFDELERGFVP-SLLTYNSLIIGLCENGELQEAGRVWDDMVERR 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+ LIK F K Y +M KG P + L +L+
Sbjct: 444 YEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALV 490
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV ++L AYC GD+E + + PD + +L+ + A R M
Sbjct: 238 DVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIM 297
Query: 89 VDMHKKGHQPEEELCSSLI 107
+M G +P E S +I
Sbjct: 298 DEMEAAGVKPNEVTYSVVI 316
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+ C G +E ++LA FE Y N+++ C+ D + +MR++ E
Sbjct: 222 VISSMCEVGLVKEGRELAERFEPVVSVY-----NALINGLCKEHDYKGAFELMREMVEKG 276
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISP+ ++ LI LA+ + M K+G P SSL+
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 5 FCRGGCFEEA---KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
F RG F+ Q+ R F + + VV N+++ +C G++ + V ++E+
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQPN---VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
SP+ T+ LI F K A M G P + ++++ L + EA
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 122 LQHVKDIAKDRCA 134
L ++ ++K+ CA
Sbjct: 444 L--IEIMSKENCA 454
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA++L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+P T++ L++ K + LA + +M KG P++ +LI + K+ E
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ G ++AK E K ++V N+++ YC +G +E+ ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ LI K+ A + +M +KG +P + ++LI
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C + A +L +D + D V N+++ +CR G +E + ++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ +F+ LI + + A+R +M G P ++L+ + L
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV----------QGL 581
Query: 121 CLQHVKDIAKD 131
C D+A++
Sbjct: 582 CKNQEGDLAEE 592
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EEA ++ + K + V+ N+++ +C G+++ ++ +
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
ISP +T++ LI E+ A + ++ +KG P+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/96 (18%), Positives = 49/96 (51%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+EA L + ++ D ++ N+++ +C +++ +++ +D + + PD TF+ +
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++ +E A +M ++G +P+ ++LI
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G E A + + + + D S++ C+ G +E + ++ +
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P ++ LI F + +A +M KKG P +SLI L + EA
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381
Query: 121 CLQHVKDI 128
C+ +K+I
Sbjct: 382 CM--IKEI 387
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +EA++L + K D + +++ C+ GDM+S + + ++ E
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D F LI ++ A R + DM GH+P++ + +I
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVI 478
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G A+ + + + + VV N+++ YCR+ ++E + ++
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESER 291
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T+ LI KE A +M + G P ++LI G+ + L
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLID--GQCKHGKIDL 349
Query: 121 CLQHVKDIAKDRCAMP 136
L++ +I KDR P
Sbjct: 350 ALRNF-EIMKDRGIRP 364
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+AFC+GG EEA +L E +VV N+++ +G + K+ E +
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
P T+ IL+K K K AY + +M +KG P + ++LI L + + ++A+
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAI- 377
Query: 122 LQHVKDI 128
+KD+
Sbjct: 378 --EIKDL 382
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EE ++L + + + + V+ N ++ AYCR+G + + + +
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG 667
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LIK A + +M +G +P ++LI GK+ +
Sbjct: 668 ISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 727
Query: 121 CL---QHVKDIAKDRCAMPFM 138
CL H K++ ++ M
Sbjct: 728 CLLREMHSKNVHPNKITYTVM 748
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G +A +L F K D N++L C G +E + +++
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D +++ LI K A+ M +M KKG +P+ S LI L M EA+
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +EA +L + K + D N + +CR+ E ++ ++E
Sbjct: 373 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 432
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+ +F ILI + KE+ + A R M KKG P
Sbjct: 433 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ F EA++L + E K VV N+ + YC+ G ME ++ ++ E
Sbjct: 443 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 502
Query: 61 ISPDYNTFHILI 72
+ PD T+ LI
Sbjct: 503 LMPDTYTYTSLI 514
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 3 SAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
S FCR EEAK+L E + +VV + ++ YC+ + + + +++ +
Sbjct: 410 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 469
Query: 63 PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T++ I+ + K+ AY+ + +M ++G P+ +SLI
Sbjct: 470 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 514
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 58/112 (51%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I +C+ G EEA +L + + + D S++ +G+++ + + ++ +L +
Sbjct: 479 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ + T+ ++I K+ A++ +M+K+G P++ + SSLI L K+
Sbjct: 539 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 590
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G AK L + K K V+ N++L Y D+ V ++ +++
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + T+ +LI+++ + A + +M KKG +P+ + +S+I
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSII 304
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ EEA + D V N+++ +CR GD++ + +KLDE
Sbjct: 531 LIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKG 590
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
S +TF+ILI + + +A + +M KG++P+
Sbjct: 591 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ CR G + + VM ++ E
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++I+I K A M D KG+ P+ ++LI
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G +EA +L +D K D V S++ C GD+E + + +
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD ++ L+K ++ + + A + M +M ++G P+ + +I L KM S+A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +A + D K DV N+++ YC+ ++S + ++ ++
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD T++ ++ K T +M KG +P + LI + K+ EA
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 544
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 4/133 (3%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C G EEA L A Y DVV N+++ C+ ++ + ++
Sbjct: 253 IRGLCEDGRLEEAVALVERMGA-YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHSE 118
PD T++ +I + K M A + D KG P+ SLI L G + E
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 119 ALCLQHVKDIAKD 131
KD+ D
Sbjct: 372 LFNEAQAKDLKPD 384
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 49/125 (39%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G + A L + + K N ++ AY +M+ + ++
Sbjct: 566 LIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 625
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ K AY + +M KG P ++ L SEA+
Sbjct: 626 YKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAV 685
Query: 121 CLQHV 125
+ H+
Sbjct: 686 AIIHI 690
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++PD +T+ ILI F K KM A +MH+K P SSLI L K
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG ++A+++ +D K +V N M+ +C+ G +E + ++ K+++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509
Query: 61 ISPDYNTFH-ILIKYFRKEK 79
PD TF I+I F+K++
Sbjct: 510 CIPDAVTFEIIIIALFKKDE 529
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G +A A+ + + V +++ C+ GD + I ++RK+D
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH---LGKMR 114
PD ++ +I K ++ AY +M+ KG + ++LI+ +GK++
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +A L + K DVV N+++ +C G ++ I ++ K+
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131
Query: 61 ISPDYNTFHILIKYFRKE 78
I+P+ T++IL+ KE
Sbjct: 1132 INPNVRTYNILVDALCKE 1149
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ EA L + K DVV ++++ +C G ++ I ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++IL+ KE A + M K +P+ S+L+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G FE A QL + + DVV NS++ CR GD+ + +
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ T+ ILI ++ A+ + +M KKG+ P +S+I
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G ++ +Q + D++ N+++ Y + +M +V +++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++++I F ++ A R M G +P+ SLI
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI 619
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G +EA + ++ + +Y DVV + ++ + R G+M+ +R++ L
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I F + A R +M G P+ ++L+ L
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLL----------NGL 377
Query: 121 CLQH 124
C QH
Sbjct: 378 CKQH 381
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G E+A + K + ++ NS++ YCR+G+++ ++K+ +
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDN 537
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD TF+ LI + KE+ A+ M K+ +P+
Sbjct: 538 VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPD 576
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ F++AK++ R + DV N ++ +CR G+++ + +++
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F + A + +M G P+ + + +I + + SEAL
Sbjct: 293 VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA ++ + DVV N++L C+ + ++ +++E
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD TF LI + ++ + A + + ++ +P+ +SLI
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G + A L + K +V NS+L C+ + V R +D+ +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257
Query: 61 ISPDYNTFHILIKYF 75
++PD +F+ILI F
Sbjct: 258 VAPDVRSFNILIGGF 272
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G + A R+ + D V+ ++ +CR G M + V ++
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
PD T++ L+ K+ + A + + +M ++G P +LC+
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP--DLCT 404
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ +A++L + E + D+ +++ YCR G+ E+ + + L
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ LI ++ A DMH + P S LI
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA ++ + VV N+++ YC G ++ + ++R + E
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERG 447
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I F +E+ A++ +M +KG P+ SSLI + L
Sbjct: 448 LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI----------QGL 497
Query: 121 CLQH 124
CLQ
Sbjct: 498 CLQQ 501
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G +EA + R + DVV ++++ +CR ++ + ++ E
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ LI+ ++ + A+ +M ++G P+E +SLI
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G + L + K +VV +++ C+ G++ + + ++
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T+ LI F ++ + AY+ + +M G P
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSP 415
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G E +L + K D V N+++ +C+ G++ + ++ ++
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP+ T+ LI K A M +G +P E ++LI
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EA L R+ + D V S++ AYC G++ + + ++ +
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ +LI K+ +A R ++ + + P++ ++LI
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLI 599
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I R G E A+ L + +AK + D+V NS++ Y + G + + V ++ +
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ LI F K + A+ + M ++G QP S+LI
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ C EEAK L + K D ++ S++ + G+ + + ++ E+
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + LI F + LA + +M +KG P++ LC L+ ++ +EAL
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726
Query: 121 CL 122
L
Sbjct: 727 AL 728
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 62/124 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C +EA ++ ++ D+V S++ +C+ ++ +H++ ++ ++
Sbjct: 327 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ LI F + + A ++MHK G P + C+ ++ L K + SEAL
Sbjct: 387 FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEAL 446
Query: 121 CLQH 124
L H
Sbjct: 447 SLFH 450
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA++L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+P T++ L++ K + LA + +M KG P++ +LI + K+ E
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ G ++AK E K ++V N+++ YC +G +E+ ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ LI K+ A + +M +KG +P + ++LI
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C + A +L +D + D V N+++ +CR G +E + ++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ +F+ LI + + A+R +M G P ++L+ + L
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV----------QGL 581
Query: 121 CLQHVKDIAKD 131
C D+A++
Sbjct: 582 CKNQEGDLAEE 592
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EEA ++ + K + V+ N+++ +C G+++ ++ +
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
ISP +T++ LI E+ A + ++ +KG P+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/96 (19%), Positives = 50/96 (52%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+EA L + ++ DV++ N+++ +C +++ +++ +D + + PD TF+ +
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++ +E A +M ++G +P+ ++LI
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G E A + + + + D S++ C+ G +E + ++ +
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P ++ LI F + +A +M KKG P +SLI L + EA
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381
Query: 121 CLQHVKDI 128
C+ +K+I
Sbjct: 382 CM--IKEI 387
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G +EEA ++ K DVV NS++ +C+ M+ ++ +
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+P T+ LI F + AYR M DM K G P+ + L+ L GK+
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 118 EALCLQHVKDIAKD 131
E L + KD A D
Sbjct: 358 ELLEVMVEKDCAPD 371
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F R G + ++A + A+ DV+ N++L AYC+ GD++ + R ++
Sbjct: 30 LITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRG--KMW 87
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
SP T+ ILI + + AY+ + +M +K P+ + + LI L KM
Sbjct: 88 CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G + A+ + + + DV+ S++ C+T ++ +M K+ E
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD ++ L+ K+ + + +M + G +P+
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD 231
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G ++A+ L + + ++V N+M+ +C+ G ++ V+ + E++
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ LI + K A+ + G P++ SS++ L EA
Sbjct: 438 CTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEA- 490
Query: 121 CLQHVKDIAKDRCAMP 136
Q V D+ + P
Sbjct: 491 --QEVMDLMTKQGCPP 504
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ + A Q + + D + N ++ +C++G++E I VM+ + E
Sbjct: 582 LIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKG 641
Query: 61 ISPDYNTFHILIKYFRKE 78
+PD T+ L++ E
Sbjct: 642 CNPDAATYFSLMRSLTTE 659
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G EA L K + ++V N+++ YCR+GDM + K+
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I PD +++ LI + KE A+ + +M K+G Q
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQ 674
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+CR G EEA QL F ++ + ++ N++L C+ G + V+ ++ +L
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++P+ T++ L+ + + A +M ++G P+ SSLI
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A C+ FE D E K D+V N+++ AYCR G +E ++
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++ K Y A +++M + G P ++L+ + + EA
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA- 381
Query: 121 CLQHVKDIAKDRCAMPFMRKF 141
Q + D R +P + F
Sbjct: 382 --QEIFDEMSRRGVLPDLVSF 400
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + E+A L + E + +++++ N +L +C G M+ V+RK+ E+
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
I+PD T+ LI + A+R +M ++G P++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G +A ++ + A+ DVV N+ L C+ + ++ E
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD+ TF LI+ + K+ A M + +P++ ++LI
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G ++A L K D V N+++ +C+ G+M + +
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD+ ++ ++ F + A M +KG +P C++LI
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+AFC+GG E+A QL D E +VV N+++ C+ G+++ K+ + +
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ +LI K + + A + + +KG P E + ++LI KM +AL
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 371
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G +A ++ D +K + V LNS++ +C+ G ME ++ ++
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + F +I + + A R + +M + +P + L ++L+ L K HS+A+
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476
Query: 121 CL 122
L
Sbjct: 477 EL 478
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G E+AK L + + +VV +++ YC+ G M+ V++V++++
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ T+ ++I + K A + + +M KG P+
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +A +L K ++V N+++ C+TG+M+ + +++K+ E
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI KE ++ +M K+G +P+ + LI + ++ EA+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 121 CL 122
L
Sbjct: 582 NL 583
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV L ++ + A+C+ G +E I + +++L +SP+ T++ LI K A+R
Sbjct: 245 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 304
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M K G S LI L K+ +EA
Sbjct: 305 EKMVKDGVNATLITYSVLINGLMKLEKFNEA 335
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G +EA L + +++ +V M+ YC+ +E + +L
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + ++ LI+ + + + A++ DM KG P SSLI + + +A
Sbjct: 627 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 686
Query: 121 CL 122
CL
Sbjct: 687 CL 688
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+AFC+GG E+A QL D E +VV N+++ C+ G+++ K+ + +
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ +LI K + + A + + +KG P E + ++LI KM +AL
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G +A ++ D +K + V LNS++ +C+ G ME ++ ++
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + F +I + + A R + +M + +P + L ++L+ L K HS+A+
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543
Query: 121 CL 122
L
Sbjct: 544 EL 545
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G E+AK L + + +VV +++ YC+ G M+ V++V++++
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ T+ ++I + K A + + +M KG P+
Sbjct: 799 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 837
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +A +L K ++V N+++ C+TG+M+ + +++K+ E
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI KE ++ +M K+G +P+ + LI + ++ EA+
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648
Query: 121 CL 122
L
Sbjct: 649 NL 650
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV L ++ + A+C+ G +E I + +++L +SP+ T++ LI K A+R
Sbjct: 312 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 371
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M K G S LI L K+ +EA
Sbjct: 372 EKMVKDGVNATLITYSVLINGLMKLEKFNEA 402
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G +EA L + +++ +V M+ YC+ +E + +L
Sbjct: 634 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 693
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + ++ LI+ + + + A++ DM KG P SSLI + + +A
Sbjct: 694 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753
Query: 121 CL 122
CL
Sbjct: 754 CL 755
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G E+A QL + ++V+ N+++ C+ G++ + +++E
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I + K A++ +M KG P+ + LI GK +AL
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 121 CLQH 124
L H
Sbjct: 787 SLFH 790
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+ + EEA+QL D E + + + S+L +Y + G+ +I + + ++
Sbjct: 841 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+ D + ++ + KE + A + + +G + E+++ +LIFHL K + S L
Sbjct: 901 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960
Query: 121 CL 122
L
Sbjct: 961 EL 962
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G EEA ++ + + K +VV N+M+ + G+M + + ++
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD T+++LI + K A + +M + P S LI L
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G + K + + E K K ++ N+ + C+TG ++ + V + + E
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +L+ F K+K A M G P ++LI K EAL
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR EEAK L D K K + + + Y ++G+++ + +
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + ILIK + A T M +KG P+ S++I L K EA+
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + GCF+EA Q+ + E + +D+V N+M+ AYCR GDME + + + EL
Sbjct: 164 LIDMYSKCGCFKEACQVFKGCE-REGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELN 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
S +NT LI + + + A + V M + G + E S++ +R
Sbjct: 223 DSVSWNT---LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLR 273
>gi|224080297|ref|XP_002306087.1| predicted protein [Populus trichocarpa]
gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + GCF+EA Q+ + E + +D+V N+M+ AYCR GDME + + + EL
Sbjct: 164 LIDMYSKCGCFKEACQVFKGCE-REGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELN 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
S +NT LI + + + A + V M + G + E S++ +R
Sbjct: 223 DSVSWNT---LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLR 273
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHV---MRKLD 57
+IS C+ G +A +A+D A VV N+++ YC+ G + HV ++++
Sbjct: 191 VISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV 250
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
E ISP+ TF++L+ + K+ A R +M ++G S+L++ L
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGL 303
>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++AK+L D +D + S+L CR G ++ H + +L +
Sbjct: 564 IIDGLCESGLIDKAKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSG 623
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SP+ +++I+I K M AY+ + +M K G P+
Sbjct: 624 VSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTPD 662
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + +GG F+EA + +DF+ + DVV S++ + C+ G +ES I ++ + E
Sbjct: 465 MIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKG 524
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ---PEEELCSSLI 107
I P+ TF+ +I R+ L Y +H P E+L S LI
Sbjct: 525 IKPNVVTFNSIIDASRQSP--TLEY----GVHGSSQAVEYPTEQLSSMLI 568
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + + G F+EA ++ E+ K DVV N++L Y R G + V + ++
Sbjct: 395 MVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWN 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I P+ T+ +I + K M+ A D K + + +S+I L K
Sbjct: 455 IYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCK 506
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + E+A L + + + D V N+M+ Y + G + I ++++
Sbjct: 360 MIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCG 419
Query: 61 ISPDYNTFHILIKYFRKEKMY------------------MLAYRTMVDMHKKGHQPEEEL 102
+ D T++ L+ + + MY L Y TM+D++ KG +E +
Sbjct: 420 MKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAM 479
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC G + +A+QL ++ + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ +I F K+ A M KG P ++LI
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+CR G EE K + D E K ++V + ++ CR GD++ + + R +
Sbjct: 238 LINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKG 297
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + LI F ++K + +M+ G +P+ ++LI
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + A Q+ + A+ K + +++ C+ GD+E + ++ +
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T++ LI+ + K + AY ++++ K+ +C +++
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIV 449
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EE K + AK K +V + + YCR G+M++ ++ +
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ LI + K+ A+ M +G P+ + S LI L K EA+
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G +EA + + K ++DV+ N ++ C+ G + I V +L
Sbjct: 366 LVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+ P +TF LI +E A + MH KG +P + S+I K R
Sbjct: 426 LEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKAR 479
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G FE A+++ + K K V N ++ +C G ++ + + ++ +
Sbjct: 331 LVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I D T++ILI+ K A + + G +P + LI + G++ A
Sbjct: 391 IEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAV 450
Query: 118 EALCLQHVKDI 128
E L + H K +
Sbjct: 451 ELLKVMHAKGL 461
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC G + +A+QL ++ + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ +I F K+ A M KG P ++LI
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 57/107 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA+C G E A++L D A + DV + ++ YC+ G+++ +M +++
Sbjct: 234 VLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAAR 293
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I+ KE+ + A M +M G+ P+ L + ++
Sbjct: 294 VQPNEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTALGAKVV 340
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA QL R E K D ++ ++++ C+ G + ++ +L E
Sbjct: 339 VVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWLCKNGMVREARNLFDEL-ERG 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P T++ LI + + A R DM ++G++P +LI L K
Sbjct: 398 FKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAMTYEALIKGLCK 449
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA+C + A++L D A DV + ++ YCRTG ++ +M +++
Sbjct: 246 VLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAG 305
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I+ KE A M +M GH P+ L + ++
Sbjct: 306 VQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDTPLAAKVV 352
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA++L + E Y K ++ NS++ C G+++ V + E
Sbjct: 386 LIYWLCKSGMVREARKLFDELEKGY-KPSLLTYNSLISGLCENGELQEAGKVWDDMVERR 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+ LIK F K +M KG P + L L+
Sbjct: 445 YEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLV 491
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC G + +A+QL ++ + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ +I F K+ A M KG P ++LI
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC G + +A+QL ++ + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ +I F K+ A M KG P ++LI
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC G + +A+QL ++ + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ +I F K+ A M KG P ++LI
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G ++A L + E K K DVV +S++ C G + ++R++
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ TF LI F KE + A +M +G P+ SSLI
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLI 356
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E+A+QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI F +E A R +++ G P ++LI ++ EAL
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 121 CLQHVKDI 128
L+ V ++
Sbjct: 321 RLREVMEV 328
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G ++A +L + + + D V N+++ AYC+ GDM S + V +K+ E
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF LI F K A + +M G P S L+
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA +L R+ + V +++ YCR D+E + + ++
Sbjct: 273 LIYGFCREGRMREALRLFREINGATPNH--VTYTTLIDGYCRVNDLEEALRLREVMEVEG 330
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T++ +++ +E A R + +M ++ +P+ C++LI
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++ + N ++ A C++GD+E ++ +++ I PD T++ LI + K+ M+ A
Sbjct: 196 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 255
Query: 89 VDMHKKGHQPEEELCSSLIFHL---GKMR 114
M + G P+ +SLI+ G+MR
Sbjct: 256 DRMERGGVSPDIVTYNSLIYGFCREGRMR 284
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR EEA +L E + VV NS+L C G ++ ++ ++ E
Sbjct: 306 LIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK 365
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T + LI + K A + M + G +P++ +LI
Sbjct: 366 VEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EEA +L D + K D+ N++L AYC G ME H++ ++
Sbjct: 280 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 339
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD ++ +I K K A + ++ +G +P + ++LI G+
Sbjct: 340 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGR 391
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A C+ G + ++ + + VV N ++ A C++G +E + ++++
Sbjct: 17 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 76
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++P TF ILI + + + + +M + G P E + + LI
Sbjct: 77 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A+ + G EE + + + K+D N M+ Y R G +E V +V+ +L +
Sbjct: 805 MLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRG 864
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LIK + +M A + M +M KG P+ ++LI L + EA+
Sbjct: 865 VVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKGISPDRVTYANLIAALQRNENFLEAV 924
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++ +C+ G EEA+ + + + ++V N+++ Y ++ D++ V L +
Sbjct: 352 LNVYCQQGKMEEAELVLQSMVDEGFTLNIVAYNTLITGYGKSSDVQKANRVFDSLGSAGL 411
Query: 62 SPDYNTFHILIKYFRKEKMY---MLAYRTM 88
+PD T+ +++ F + +Y +L YR +
Sbjct: 412 APDETTYRSMVEGFGRANIYEEAILYYRKL 441
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G + A + RD + D+V NS++ C+TG + +++ KL
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I PD T++ LI + KE M+ A+ + G P E
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI K++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532
Query: 121 CL 122
L
Sbjct: 533 GL 534
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G +EA +L D + D + N ++ A CR G++E + + +
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI + A + DM +G P+ +SLI L K EAL
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 121 CL 122
L
Sbjct: 673 NL 674
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EEA+ + + K + V N ++ A C+ ++ +++ +
Sbjct: 448 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 507
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI K + A DM +G ++LI + A EAL
Sbjct: 508 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 567
Query: 121 CL 122
L
Sbjct: 568 KL 569
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E+A+QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI F +E A R +++ G P ++LI ++ EAL
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 121 CLQHVKDI 128
L+ V ++
Sbjct: 321 RLREVMEV 328
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G ++A +L + + + D V N+++ AYC+ GDM S + V +K+ E
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF LI F K A + +M G P S L+
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA +L R+ + V +++ YCR D+E + + ++
Sbjct: 273 LIYGFCREGRMREALRLFREINGATPNH--VTYTTLIDGYCRVNDLEEALRLREVMEVEG 330
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T++ +++ +E A R + +M ++ +P+ C++LI
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++ + N ++ A C++GD+E ++ +++ I PD T++ LI + K+ M+ A
Sbjct: 196 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 255
Query: 89 VDMHKKGHQPEEELCSSLIFHL---GKMR 114
M + G P+ +SLI+ G+MR
Sbjct: 256 DRMERGGVSPDIVTYNSLIYGFCREGRMR 284
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR EEA +L E + VV NS+L C G ++ ++ ++ E
Sbjct: 306 LIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK 365
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T + LI + K A + M + G +P++ +LI
Sbjct: 366 VEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G E A+ L + + K +VV+ N+M+ YC+ G M+ + ++
Sbjct: 328 LISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKG 387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
D T++IL K Y A R + M +KG P C++ I
Sbjct: 388 FEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFI 434
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ S C+ +EEAK++ K +VV + + YC+ G++ +R +++
Sbjct: 398 LASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T++ LI + K + A+ +M +KG P+ +SLI
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLI 504
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G F +A + DFEA + V +++ C+ G+ + + +K++E
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG 230
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ILI K+K+ A M K P+ +SLI L R EA
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290
Query: 121 CL 122
L
Sbjct: 291 AL 292
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +A +L R ++ Y K D+ + N ++ A C+ G+++ + +L
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ P+ + +I KE + A +M G P+E
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDE 550
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+ L ++ + + D+ + +L +C+ G + + R +
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI K A + ++ +G P ++ +++I +L K EA
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA- 534
Query: 121 CLQHVKDIAKDRC 133
L+ +++ D C
Sbjct: 535 -LEAFRNMEGDGC 546
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 30 VVLLNSMLCAYCRTGDM-ESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++ +L A + G +VI + ++++ +SPD T ILI F + LA+
Sbjct: 94 IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M K G QP+ ++LI L K+ ++A+
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 47/108 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA + +AK D+ NS++ C + ++ ++ L
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
I P+ TF++L+ KE A M + G +P+ SSL++
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMY 348
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +A +L + E D + +++ AYC+TG+M ++R++ +
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P TF++L+ F M R + M +KG P +SL+
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C GG ++ +L ++ + K K ++ NS++ C++G ++ V+R++
Sbjct: 16 VINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQG 75
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD + LI F K AY+ +M K+ P+
Sbjct: 76 IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD 114
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ C+ G + A +L + K + ++ NS++ C++G++ + +M +++
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD TF L+ + K + A+ + +M +G QP
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP 288
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G + A +L + E + D + +++C CR G M V K+
Sbjct: 86 LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
+ PD T+ LI + K A+ M + G P ++L + LG++ +
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205
Query: 118 EAL 120
E L
Sbjct: 206 ELL 208
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ ++L K + NS++ YC +M + + +
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ PD NT++ILIK K + A+ +M +KG
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G ++A+++ R+ + D V+ +++ +C+ G++++ + ++++
Sbjct: 51 IILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR 110
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD+ + +I + M A + M +G +P+E ++LI
Sbjct: 111 IVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLI 157
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 26 DKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAY 85
D DVV ++++ YC G+++ V+ +++++ + P+ T++ +I K A
Sbjct: 6 DAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAE 65
Query: 86 RTMVDMHKKGHQPEEELCSSLI---FHLGKMRA 115
R + +M +G P+ + ++LI LG ++A
Sbjct: 66 RVLREMINQGIVPDTVVYTTLIDGFCKLGNIQA 98
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SAF R G A ++ +K + DV S+L AY R G +E + + ++
Sbjct: 264 LLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSN 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ LI K K + DM G +P+ +SL+ GK +SE L
Sbjct: 324 CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVL 383
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + R G + + + R+ A D+V N+++ +Y + G + S + ++
Sbjct: 579 LMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNG 638
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T++ + + M+ A + MHK G +P+E +L+
Sbjct: 639 IQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLV 685
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA+ R G E+A ++ + N+++ + + + ++ + +
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ F K MY + M K G +P++ + LI G+ + +AL
Sbjct: 359 VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL 418
Query: 121 CL 122
+
Sbjct: 419 SI 420
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + G + E ++ R + + D N ++ AY R G + + + + +
Sbjct: 369 LLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+PD TF+ L+ +E + A + ++++ ++P + +S++
Sbjct: 429 CTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASML 475
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 40/96 (41%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D N+M+ Y + G M+ L + PD T++ L+ + +E MY T+
Sbjct: 537 DTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATL 596
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQH 124
+ G P+ +++IF K S A + H
Sbjct: 597 RECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFH 632
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EA QL + D+V N+++C YC+ G M ++ ++
Sbjct: 325 LMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I PD T +LI+ +RKE + A +V++ + G
Sbjct: 385 ICPDKVTCQVLIEGYRKEARIVSALNLVVELERFG 419
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
FC+ G ++ E + + D+V N+++ YCR G ++ ++ R + + P
Sbjct: 258 VFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLP 317
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHSEAL 120
D ++ L+ KE A++ M +G P+ ++LI GKMR L
Sbjct: 318 DLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLL 377
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C EA ++ ++ D+V+ S++ +C+ ++ +H++ ++ ++
Sbjct: 328 LIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMG 387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI F + + A ++MHK G P + C+ ++ L K SEA+
Sbjct: 388 FVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAV 447
Query: 121 CL 122
L
Sbjct: 448 SL 449
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G +A LA E + DV ++ C+TGD + + +RK++E
Sbjct: 153 LINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERN 212
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ + ++ K+ + A +M+ KG +P
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRP 250
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 53/125 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EA L + K + ++V ++ C G + ++ ++ ++
Sbjct: 223 IMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +IL+ F KE M A + M G P+ +SLI +EA+
Sbjct: 283 MRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAM 342
Query: 121 CLQHV 125
+ H+
Sbjct: 343 RVFHL 347
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+F R G EEA ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 478 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 537
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD T+ LI+ F K +A R +M +G P
Sbjct: 538 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPN 576
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + C G EA L K D V+ N++L A + + + K+ +
Sbjct: 408 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 467
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD +++ILI F + A + ++ +P+ +SLI LGK EA
Sbjct: 468 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 526
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++ LI F KE + A +M +G P +S+I +
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI----------DGF 370
Query: 121 CLQHVKDIAKD 131
C Q D A+D
Sbjct: 371 CKQDRLDAAED 381
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC G + +A+QL ++ + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T++ +I F K+ A M KG P+ ++LI
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ +EA Q+ +K +VV N+++ YC+ G ++ + + ++
Sbjct: 552 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I D + LI FRK A +M G P+
Sbjct: 612 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 11/130 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL- 59
+I FC G A L++ + D+V N++L C G ++ + + + + +
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495
Query: 60 ----------AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+ PD T++ILI E ++ A +M +G P+ SS+I
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 110 LGKMRAHSEA 119
L K EA
Sbjct: 556 LCKQSRLDEA 565
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I C+ G +EA L R ++ + V NS++ +CR G M+ ++++ ++ E
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 189
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T+ L+ F K AY + M +KG P +SL+ L + S+A
Sbjct: 190 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDA 249
Query: 120 L 120
+
Sbjct: 250 V 250
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR G +EA L DVV +++ +C+ ++ ++ ++
Sbjct: 166 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+ TF L+ +E A + +M +K P
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 263
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA + G EE + R+ K D V N+++ +C+ D+ES VM ++ E
Sbjct: 199 LISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKG 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD +F+ +I + KE A + DM ++G P+
Sbjct: 259 CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPD 297
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A +L + K + ++++ A + G E V ++R++ E
Sbjct: 164 LIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENG 223
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ +I KE A+R M +M +KG +P+ +++I L K +A+
Sbjct: 224 CKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAM 283
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
L ++D+ + C + IF
Sbjct: 284 DL--LEDMPRRGCPPDVLSYRIIF 305
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R +A++L ++ E+K D V NS+L A+ R G+ E V + ++ +
Sbjct: 362 MISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRG 421
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ + A + DM G P+ + LI LGK EA
Sbjct: 422 FGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEA 480
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 3/146 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF R G E+ + + + + D + N+++ Y + G + + + R +
Sbjct: 397 LLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSG 456
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHS 117
+PD T+ +LI K A M +M G +P S+LI GK
Sbjct: 457 RNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAE 516
Query: 118 EALCLQHVKDIAKDRCAMPFMRKFFI 143
E I DR A M FF+
Sbjct: 517 ETFNCMRRSGIKPDRLAYSVMLDFFL 542
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K D N+++ YCR E +M K+ L + P +T+ LI F K++MY A
Sbjct: 981 KPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEE 1040
Query: 87 TMVDMHKKGHQ 97
++ G++
Sbjct: 1041 LFEELRSNGYK 1051
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ + NS+L Y D +S+ + +K+ + ++ PD T++ LI + +++ + M
Sbjct: 948 DLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLM 1007
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M G +P+ + SLI K R + +A
Sbjct: 1008 NKMRSLGLEPKLDTYRSLITAFNKQRMYEQA 1038
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF + +E+A++L + + K D + M+ Y +GD +++ + E
Sbjct: 1025 LITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESG 1084
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P +T H+L+ + K A + ++ G
Sbjct: 1085 IEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTG 1119
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR G ++A ++ E + DV N++ C CR ME ++ + E
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ +Y ++ LI KE + A R DM KG +P
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRP 411
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G EA++L RD E K + VV N M+ Y ++G + +++++
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ L+ +A R +M ++G +P ++LI L K EA
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEA 502
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 39/71 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G E A+ L D + + ++ ++ N+M+ YCR G ++ + + ++ +
Sbjct: 279 LINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMG 338
Query: 61 ISPDYNTFHIL 71
I D T++ L
Sbjct: 339 IQLDVYTYNTL 349
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G ++A++L + K + N +L Y R + V V+++++
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 61 ISPDYNTFHILI 72
+ P T+ IL+
Sbjct: 199 VEPTVGTYTILV 210
>gi|224123682|ref|XP_002319140.1| predicted protein [Populus trichocarpa]
gi|222857516|gb|EEE95063.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
++DVV SM+ Y + G + V+ + +++ ++ I PD ++ +I K ++ A+
Sbjct: 7 RFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFN 66
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRCAMPFMRKFFIF 144
M M +KG P +SLI L + R EA + D RC P +R + F
Sbjct: 67 LMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEA---KGAFDDMLKRCISPTIRTYHAF 121
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A +G EA L + E K ++V NS++ CR +E + +
Sbjct: 51 VIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRC 110
Query: 61 ISPDYNTFHILIKYFRK-EKMYMLAYRTMVDMHKKGHQP 98
ISP T+H ++ R E+++ L + M K G QP
Sbjct: 111 ISPTIRTYHAFLRILRTGEEVFAL----LEKMRKMGCQP 145
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ +A +L AK DVV ++++ +C G +E + R++
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PDY TF+IL+ KE A +V M K+G P SSL+
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + AK + + +VV +S++ YC + HV+ + ++
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ +++ +I F K KM A DM KG P++ +SLI
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + ++ N ++ A C+ ++ I +++K+ +
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I PD TF+ILI K A D+ KG+
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYS 485
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 3/137 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G EEA L R+ K D N ++ A C+ G+++ +++ + +
Sbjct: 249 LIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEG 308
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L+ + A + + + G P ++I K++ EAL
Sbjct: 309 VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEAL 368
Query: 121 CL---QHVKDIAKDRCA 134
L K IA D+
Sbjct: 369 SLFNDMQFKGIAPDKVT 385
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ FC+ +EA L D + K D V NS++ C++G + ++ ++ +
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ LI K A + + +G QP+ + LI+ L K+
Sbjct: 414 QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGR----- 468
Query: 121 CLQHVKDIAKD 131
L++ +D+ +D
Sbjct: 469 -LKNAQDVFQD 478
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+F R G EEA ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 542 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 601
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD T+ LI+ F K +A R +M +G P
Sbjct: 602 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPN 640
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + C G EA L K D V+ N++L A + + + K+ +
Sbjct: 472 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 531
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD +++ILI F + A + ++ +P+ +SLI LGK EA
Sbjct: 532 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 590
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G + A + RD + D+V NS++ C+TG + +++ KL
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I PD T++ LI + KE M+ A+ + G P E
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI K++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514
Query: 121 CL 122
L
Sbjct: 515 GL 516
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G +EA +L D + D + N ++ A CR G++E + + +
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI + A + DM +G P+ +SLI L K EAL
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 121 CL 122
L
Sbjct: 655 NL 656
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EEA+ + + K + V N ++ A C+ ++ +++ +
Sbjct: 430 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 489
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI K + A DM +G ++LI + A EAL
Sbjct: 490 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 549
Query: 121 CL 122
L
Sbjct: 550 KL 551
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I CR G +EA +L ++ DV+ N+++C +C+ + + K+ +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
P+ T++ +I F K M A + + D KG P+E SSLI L
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ GC +A + D AK D+ N+++ YC+ +M+ I ++ +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L+ K + T M +KG P + LI K R SEA+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G + A ++ RD K D +S++ C GDM + V + E
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ L+K K+ + + A + M DM + G P+ + ++ L KM
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG------ 440
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
CL I D A + F F
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTF 464
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 53/110 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ ++A ++ + DV+ N++L C+ +++V+ + + E
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+P+ T++ILI+ F K++ A +M +G P+ +LI L
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I C G ++A +L E +Y Y + N M+ A+C ++ + K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD T+ ++I + K LA+ +++ KG P C ++ L SEA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 120 LCL 122
+ +
Sbjct: 692 VVI 694
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FC G EA + + E K + ++ N+++ AYC++ +E + ++
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKG 396
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I P TF+IL+ + ++ + + M +M + G +P + + +I GK + S+
Sbjct: 397 IKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSD 454
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR G ++A ++ E + D+ N++ C CR ++ ++ + E+
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+Y T+ LI K+ + A R +M +KG P
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 455
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G E A+ L D + + + ++ N+M+ YCR G ++ + + ++++
Sbjct: 323 LINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMG 382
Query: 61 ISPDYNTFHIL 71
+ D T++ L
Sbjct: 383 VELDIYTYNTL 393
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
CR +EAK L + V +++ +C+ GDM + R++ E +P
Sbjct: 396 GLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 455
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T++++I + K+ A R +M KKG P+ +SL+
Sbjct: 456 SVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLV 499
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV L +++ AYCR G+M V+ + + P+ T+ +LI F K A +
Sbjct: 281 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLL 340
Query: 89 VDMHKKG 95
DM +G
Sbjct: 341 ADMQGQG 347
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+AFC+GG EEA +L E +VV N+++ G + K+ E +
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T+ IL+K + K AY + +M KKG P + ++LI
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EE ++ + +K + + V+ N ++ AYCR+G + + + +
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LIK A +M +G +P ++LI GK+ +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 121 CL---QHVKDIAKDRCAMPFM 138
CL H K++ ++ M
Sbjct: 736 CLLREMHSKNVHPNKITYTVM 756
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ R F++ + A D K DV L + + A+C+ G +E + + K++E
Sbjct: 232 LLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ TF+ +I Y A+ M ++G +P S L+ L + + +A
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 60/138 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 328 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI + + A R DM + QP S +I L K EA+
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447
Query: 121 CLQHVKDIAKDRCAMPFM 138
L + ++ D F+
Sbjct: 448 GLLNELNLRPDIAPQAFI 465
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G EA++L + +K K D V +++ YC+ G+M+ + ++ E
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L+ K +A + +M +KG QP ++LI L K+ +A+
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517
Query: 121 CLQHVKDIA 129
L D+A
Sbjct: 518 KLMEEMDLA 526
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ ++L + K + NS++ YC +M + I + + +
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD NT++ILIK K + A+ +M +KG +SLI K + EA
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEA 691
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E+A +L + + D + +++ AYC+ G+M ++R + +
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ F M R + M KG P +SL+ MRA
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI 622
Query: 118 EALCLQHVKDIAKD 131
E H + + D
Sbjct: 623 EIYKGMHAQGVVPD 636
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G + A +L + K + +V N+++ C+ G++E + +M ++D
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ ++ + K A+ + M KG QP
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EA+Q+ R + + D V+ +++ + ++G++ + ++
Sbjct: 328 IISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK 387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T+ +I + + A + +M KG +P+E ++LI K EA
Sbjct: 388 IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAF 447
Query: 121 CLQH 124
L +
Sbjct: 448 SLHN 451
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
C+ G +EA L E + + DVV + ++ YC+ + V+ +M +L + P+
Sbjct: 262 LCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPN 321
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
T++ +I + K + A + + M + P+ + ++LI GK
Sbjct: 322 QYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ + +L + + K K + NS++ C+TG + V+R +
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I PD + LI F K + Y+ +M +K P+ +S+I L
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGL 402
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E K+L K + +VV NS++ YC +M+S + + +
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ NT++ILIK K + A +M +KG + S+LI L K + SEA
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 42/75 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E+A ++ + EA + DV +++ C++G+ + ++++++ +
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 61 ISPDYNTFHILIKYF 75
I P T+++L+ F
Sbjct: 563 IKPSIATYNVLMNGF 577
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G F+ A + ++ K K + N ++ +C +G +E ++ + E
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+K + +K MH + P E + LI K R EAL
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC G A++L + + + D V +++ CR G+++ V++++ +
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ D T+ +LI + K + A+R +M + P ++L L G +RA +
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482
Query: 118 EAL 120
E L
Sbjct: 483 ELL 485
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +EA ++ ++ K DVV ++ YC+ G+M V ++
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK-------M 113
++P+ T+ L K+ A + +M KG + +SLI L K M
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAM 517
Query: 114 RAHSEALCLQHVKDI 128
R +E H D+
Sbjct: 518 RIMTEMEAAGHRTDV 532
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
C+ G A +L + K + +V NS++ C+ G++E + +M +++
Sbjct: 471 GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT 530
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
D T+ LI K + A+ + +M KG +P
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKP 565
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I CR G +EA +L ++ DV+ N+++C +C+ + + K+ +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
P+ T++ +I F K M A + + D KG P+E SSLI L
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ GC +A + D AK D+ N+++ YC+ +M+ I ++ +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L+ K + T M +KG P + LI K R SEA+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G + A ++ RD K D +S++ C GDM + V + E
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ L+K K+ + + A + M DM + G P+ + ++ L KM
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG------ 440
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
CL I D A + F F
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTF 464
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 53/110 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ ++A ++ + DV+ N++L C+ +++V+ + + E
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+P+ T++ILI+ F K++ A +M +G P+ +LI L
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I C G ++A +L E +Y Y + N M+ A+C ++ + K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD T+ ++I + K LA+ +++ KG P C ++ L SEA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 120 LCL 122
+ +
Sbjct: 692 VVI 694
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + G E+AK++ ++ + +V NSM+ C G+ ++++++
Sbjct: 367 MITGYVVSGELEKAKEMFKEMTVEGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 426
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ Y RK A + + DM KKGH
Sbjct: 427 CNPNFVVYSTLVSYLRKAGKLSEARKVIRDMVKKGH 462
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS F + G +A + + + + D V N+++ +CRT V ++++++E
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T++ LI Y K A + M M K G P
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AFC FE+A +L + D ++ +++ + + G M V+ +L +L
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I PD ++ LI F + + + + +M + G +P+ ++LI + K
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G E+ K+L + + +VV +N+++ CRTG + S ++ +
Sbjct: 425 LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T+ LI F + A +M K G P+ + +LI
Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I+A+C G EA ++ +D +A + V+ N ++ + C+ ++S + +M +
Sbjct: 635 VINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIW 694
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++P+ T++ + K R EK + M M + P+
Sbjct: 695 GVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPD 734
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR F ++ ++ E K D + N+++ + GD++ VMRK+ +
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624
Query: 61 ISPDYNTFHILIKYF 75
+ P T+ +I +
Sbjct: 625 VVPTVATYGAVINAY 639
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G A + + + K D V +++ A+C + E + + ++ +
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPD ++ LI F + A + ++ K G +P+ ++LI
Sbjct: 520 CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+AFC+GG EEA +L E +VV N+++ G + K+ E +
Sbjct: 256 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 315
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T+ IL+K + K AY + +M KKG P + ++LI
Sbjct: 316 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 361
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EE ++ + +K + + V+ N ++ AYCR+G + + + +
Sbjct: 605 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 664
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LIK A +M +G +P ++LI GK+ +
Sbjct: 665 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 724
Query: 121 CL---QHVKDIAKDRCAMPFM 138
CL H K++ ++ M
Sbjct: 725 CLLREMHSKNVHPNKITYTVM 745
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ R F++ + A D K DV L + + A+C+ G +E + + K++E
Sbjct: 221 LLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 279
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ TF+ +I Y A+ M ++G +P S L+ L + + +A
Sbjct: 280 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 338
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 46/75 (61%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +GG ++EA ++ R+F+ K DVVL ++++ A C+ G +ES + + ++ +
Sbjct: 358 LIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG 417
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ +I F
Sbjct: 418 IRPNVVTYNSIIDAF 432
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G FEEA + ++ E+ K D V N++L Y + G E V V ++
Sbjct: 288 LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER 347
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
I P+ +L Y T++D++ KG +E +
Sbjct: 348 IFPN-----------------LLTYSTLIDVYSKGGLYQEAM 372
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 56/118 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG + A Q+ + K+ +VV ++++ Y + G ++ +++ ++ +
Sbjct: 218 LLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFAS 277
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I D +++ L+ + K + A +M G + + ++L+ GK + E
Sbjct: 278 IGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEE 335
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 46/75 (61%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +GG ++EA ++ R+F+ K DVVL ++++ A C+ G +ES + + ++ +
Sbjct: 472 LIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG 531
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ +I F
Sbjct: 532 IRPNVVTYNSIIDAF 546
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G FEEA + ++ E+ K D V N++L Y + G E V V ++
Sbjct: 402 LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER 461
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
I P+ +L Y T++D++ KG +E +
Sbjct: 462 IFPN-----------------LLTYSTLIDVYSKGGLYQEAM 486
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 4 AFC-RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
A C RGG +E A+ L + + + D+ N++L A C+ G M+ +M ++ I
Sbjct: 299 AVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIM 358
Query: 63 PDYNTFHILIKYFRK 77
P+ T+ +I + K
Sbjct: 359 PNVVTYSTVIDGYAK 373
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 56/118 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG + A Q+ + K+ +VV ++++ Y + G ++ +++ ++ +
Sbjct: 332 LLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFAS 391
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I D +++ L+ + K + A +M G + + ++L+ GK + E
Sbjct: 392 IGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEE 449
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A R G E A L +K K +V NS+L CR+G + V +++D+
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD +F ILI F + A + +M +G +P+
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 234
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G E+A + K +++ NS++ YCR+G++ ++K+
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD T++ LI + KE A++ + M K+ QP+
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G +++A ++ ++ + DV ++ +CR G++E + + +++
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 61 ISPDYNTFHILIKYF-RKEKM-YMLAY 85
I PD +F LI F R+ KM + +AY
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAY 257
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EEA ++ ++ + K D+V + ++ + R G M+ + +R++
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+ PD + ++I F + + A R +M G P+ ++L+ L K R
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 319
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G ++A QL + + D+V N+++ CR GD++ + +
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ T+ ILI ++ A+ + +M KG P +S+I
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ +C+ F++ + + E + DVV N M+ A R GD E+ + ++ +
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 160
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++K + M+ A+ +M G P+ + LI ++ EAL
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G + ++ + D++ N+++ Y + M ++ +++
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+++LI F A M KG +P+ S+I
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G + A R+ D V+ ++ +CR G M + V ++
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
PD T++ L+ KE+ + A + +M ++G P +LC+
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP--DLCT 342
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EA ++ D K+ ++ S+L +CR G + V+ ++ E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD F L+ + AY M DM K+G +P + LI
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EAK++ + + D+V+ ++L Y G M +M + +
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ N + +LI+ R EK A R V+M + G + + ++LI
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVIHVMRKLDEL 59
++S + G +A L D + + +V ++ A CRT M+ + V +++
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T+ LI F K M Y + DM KKG P + ++ K E
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE- 395
Query: 120 LCLQHVKDIAKDRC 133
CL+ ++ + + C
Sbjct: 396 -CLELIEKMKRRGC 408
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A R G E A L +K K +V NS+L CR+G + V +++D+
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD +F ILI F + A + +M +G +P+
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 295
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G E+A + K +++ NS++ YCR+G++ ++K+
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD T++ LI + KE A++ + M K+ QP+
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G +++A ++ ++ + DV ++ +CR G++E + + +++
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 61 ISPDYNTFHILIKYF-RKEKM-YMLAY 85
I PD +F LI F R+ KM + +AY
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAY 318
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EEA ++ ++ + K D+V + ++ + R G M+ + +R++
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+ PD + ++I F + + A R +M G P+ ++L+ L K R
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 380
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G ++A QL + + D+V N+++ CR GD++ + +
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ T+ ILI ++ A+ + +M KG P +S+I
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ +C+ F++ + + E + DVV N M+ A R GD E+ + ++ +
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++K + M+ A+ +M G P+ + LI ++ EAL
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G + ++ + D++ N+++ Y + M ++ +++
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+++LI F A M KG +P+ S+I
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G + A R+ D V+ ++ +CR G M + V ++
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
PD T++ L+ KE+ + A + +M ++G P +LC+
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP--DLCT 403
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + G ++AK++ R+ K +V NSM+ C G+ ++++++
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ Y RK A + + +M KKGH
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + I ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G EAK+L ++ E K VV S++ C++ +++ I ++ ++
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ K A + + M KK H P S+LI L K R EA+
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAV 316
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+AFC+GG EEA +L E +VV N+++ G + K+ E +
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T+ IL+K + K AY + +M KKG P + ++LI
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 385
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EE ++ + +K + + V+ N ++ AYCR+G + + + +
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LIK A +M +G +P ++LI GK+ +
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748
Query: 121 CL---QHVKDIAKDRCAMPFM 138
CL H K++ ++ M
Sbjct: 749 CLLREMHSKNVHPNKITYTVM 769
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ R F++ + A D K DV L + + A+C+ G +E + + K++E
Sbjct: 245 LLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ TF+ +I Y A+ M ++G +P S L+ L + + +A
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 362
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A +L + K + +V + NSM+ C+ G++E I +M++++
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T+ +I + + A++ + +M +G QP
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ C+ G E+A +L ++ E D + +++ AYCR GD++ +++++ +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P TF++L+ F M R + M +KG P+
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ +L K D + N+++ +C M + + +++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD NT++ILIK K + A+ +M +KG+ P ++LI
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F +GG E + L + ++ K D V +++ YC+ G+M + + ++ ++
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ LI K A + +M KKG Q + +S++ + K +A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 121 CLQHVKDIA 129
L ++A
Sbjct: 524 KLMKEMEVA 532
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR G +EA +L + + DVV ++++ YC G+++ + +M +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ T++ +I K A + + +M + P+ + ++LI F LG +R +
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383
Query: 118 EALCLQHVKDIAKD 131
+ K I+ D
Sbjct: 384 KWFDEMLSKKISPD 397
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+CR G ++A +L ++ + + VV N ++ +C G +E ++ + E
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+K + M +G P+ + LI K R EA
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 121 CL 122
L
Sbjct: 664 FL 665
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 50/94 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+V+ S++ +C+ ++ V+H++ ++ ++ PD T+ LI F + + A
Sbjct: 356 DIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELF 415
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
++MHK G P + C+ ++ L K SEA+ L
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSL 449
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD---MESVIHVMRKLD 57
+I+ C+ G +A + D + + +V+ N+++ YC+ G M +++++
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMR 228
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
I P+ TF+ILI F K+K A + +M+++G +P +SLI L +
Sbjct: 229 ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVN 288
Query: 118 EALCLQHVKDIAKDRCAMP 136
EA L +D + C P
Sbjct: 289 EATAL---RDQMVNSCLKP 304
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ E+A L R K DV N ++ CR GD+E+ +++ ++D
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T++ILI + A R + +M +KG +P + +++I
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI 453
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G E A+ L + + K+ K D++ N ++ + C G+M+ + ++ ++
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ P T++ +I + KE A M K G
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G ++A +L + K K + N+M+ YC+ G++ + +++ +++++
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ T+++LIK F K+ A + +M +KG P
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIP 514
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ ++A +L D + +V N ++ AYC+ +ME + R +
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371
Query: 61 ISPDYNTFHILI 72
+ PD +T++ LI
Sbjct: 372 VCPDVSTYNCLI 383
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ A ++ + + K +VV NS++ C G + + ++
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T + L+ F K KM A DM K+G P
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITP 339
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + I ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G ++EA L + E + K DV+ NS++ +C G + ++R +
Sbjct: 262 IIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRN 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYR 86
I+P+ TF LI F KE + +R
Sbjct: 322 ITPNVVTFSALIDCFVKEGKLINEHR 347
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G A L R E K K VV N ++ + C+ G+ + + + +++
Sbjct: 227 ILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D T++ LI F + + + DM + P S+LI
Sbjct: 287 IKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALI 333
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 584 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 643
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + K G P+ L + ++
Sbjct: 644 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 690
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A +L + DVV NS++ C+T +M V+ ++ +
Sbjct: 163 LIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I P+ T++ LI + M+ + R +M G P C+S I L
Sbjct: 223 IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL 272
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLDE 58
I A CR +EAK + K K +++ +++L Y G +M S++++M
Sbjct: 269 IHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMV---S 325
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I P++ F+ILI + + M A DM KG P+ +++I L ++ +
Sbjct: 326 KGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 385
Query: 119 AL-CLQHVKDIA 129
AL H+ DI
Sbjct: 386 ALHKFNHMVDIG 397
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 444 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ + K A DM KG +P L + ++ L + R + A
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A +L + K + +V + NSM+ C+ G++E I +M++++
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T+ +I + + A++ + +M +G QP
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ C+ G E+A +L ++ E D + +++ AYCR GD++ +++++ +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P TF++L+ F M R + M +KG P+
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ +L K D + N+++ +C M + + +++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD NT++ILIK K + A+ +M +KG+ P ++LI K R EA
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEA 697
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F +GG E + L + ++ K D V +++ YC+ G+M + + ++ ++
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ LI K A + +M KKG Q + +S++ + K +A+
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523
Query: 121 CLQHVKDIA 129
L ++A
Sbjct: 524 KLMKEMEVA 532
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR G +EA +L + + DVV ++++ YC G+++ + +M +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ T++ +I K A + + +M + P+ + ++LI F LG +R +
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383
Query: 118 EALCLQHVKDIAKD 131
+ K I+ D
Sbjct: 384 KWFDEMLSKKISPD 397
>gi|224144668|ref|XP_002325369.1| predicted protein [Populus trichocarpa]
gi|222862244|gb|EEE99750.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I G E AK + R + DV NSM+ A C G+++ + + + +L
Sbjct: 222 LIEGLLNAGYLESAKDMVRRMMKEGLVPDVNTFNSMVEAICNAGEVDFCVDMYHSVCKLG 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD N++ ILI K A+R + ++ + GH+P L + +I + + +A
Sbjct: 282 FCPDINSYKILIPAVSKVGRIDEAFRLLHNLIEDGHKPFPSLYAPIIKGMFRRGQFDDAF 341
Query: 121 C 121
C
Sbjct: 342 C 342
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G ++A +L + + + D V N+++ AYC+ GDM S + V +K+ E
Sbjct: 334 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF LI F K A + +M G P S L+
Sbjct: 394 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 440
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E+A+QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 228 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 287
Query: 61 ISPDYNTFHILIKYFRKE 78
+SPD T++ LI F +E
Sbjct: 288 VSPDIVTYNSLIYGFCRE 305
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++ + N ++ A C++GD+E ++ +++ I PD T++ LI + K+ M+ A
Sbjct: 221 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 280
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK-MRAHSEALCLQHVKDI 128
M + G P+ +SLI+ + + EAL L+ V ++
Sbjct: 281 DRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEV 321
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EEA + ++ + DVV + ++ + R G+M+ +R++ E
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + ++I F + + + A R +M G P+ ++L+ L K R S+A
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G E+A Q + + D+V N+++ CR GD+ + +
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ T+ ILI ++ A+ + +M KG P +S+I
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A R G E A L +K K +V NS+L R G + V R +D
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259
Query: 61 ISPDYNTFHILIKYF 75
++PD +F++LI F
Sbjct: 260 VAPDVRSFNMLIGGF 274
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G +++A+++ R +A DV N ++ +CR G++E + +++
Sbjct: 235 VLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR 294
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +F LI F + A + +M + G P+ + + +I
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G + A + K +++ NS++ YCR+G++ + K+
Sbjct: 480 LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ LI + KE A+ + M + QP+
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ +A++L + + + D+ +++ YCR G++E + + +
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ LI ++ A DMH + P S LI
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA ++ + A DVV N++L C+ + ++ ++ E
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 61 ISPDYNTFHILI 72
+ PD TF LI
Sbjct: 400 VPPDLCTFTTLI 411
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G + A + R+ D V+ ++ +CR G M + V ++
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ KE+ A + +M ++G P +LC+ G R +
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP--DLCTFTTLIHGYCRDGNIEK 422
Query: 121 CLQHVKDIAKDR 132
LQ I+ R
Sbjct: 423 ALQFFDTISDQR 434
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 60/122 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S FC+ G A ++ ++ E + K V ++ + R+ +ME I + ++EL
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +T+ +LI F + A R M +K +P E + ++++ K + AL
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498
Query: 121 CL 122
L
Sbjct: 499 RL 500
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC +A L RD +++ +V N ++ +C+ GD V+++++E
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T+ ILI F + A + M + G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G EA +L + K + + V+ N+M+ YC+ G + + R+++E
Sbjct: 449 LIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +I+ KE+ A + M G P + + + + K +HS ++
Sbjct: 509 LPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILN--LISRAKNDSHSRSM 566
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR EA ++ ++ +++ N+++ +C + + + R L
Sbjct: 309 LIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T++IL+ F K+ A + + +M ++G +P + + LI
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EA ++ D K+ ++ S+L +CR G + V+ ++ E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD F L+ + AY M DM K+G +P + LI L
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EAK++ + + D+V+ ++L Y G M +M + +
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKG 95
P+ N + +LI+ R EK A R V+M + G
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVIHVMRKLDEL 59
++S + G +A L D + + +V ++ A CRT M+ + V +++
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
D T+ LI F K M Y + DM KKG P +
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+V+ N ++C++C GD+ H++R++ I PD +F+ LI+ + + + A +
Sbjct: 569 NVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLF 628
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M + G QP+ +LI L K H +A
Sbjct: 629 DSMLRLGIQPDNYTYGALIKSLCKSGRHDKA 659
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+G + A ++ RD + ++V N+++ +CR G+M+ ++ L E
Sbjct: 471 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 530
Query: 61 ISPDYNTFHILI 72
PD TF+ LI
Sbjct: 531 FRPDIFTFNSLI 542
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 40/104 (38%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FC G + L R + + D N+++ Y + + + L
Sbjct: 576 LICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLG 635
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
I PD T+ LIK K + A + M + G P+ CS
Sbjct: 636 IQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCS 679
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHV---MRKLD 57
+IS CR G +A +A+D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
E ISP TF +LI + K A R +M ++G
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K F K+ M A + M ++ +P+ + + LI LGKM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 385
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 47/93 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F R G + A L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
+ P++ T++ +I+ F + AY M K
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +A + + DVV+ N ++ Y R G ME + V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
ISP+ T++ LI F + + A + +M +KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHV---MRKLD 57
+IS CR G +A +A+D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
E ISP TF +LI + K A R +M ++G
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K F K+ M A + M ++ +P+ + + LI LGKM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKM 385
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 47/93 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F R G + A L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
+ P++ T++ +I+ F + AY M K
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +A + + DVV+ ++ Y R G ME + V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
ISP+ T++ LI F + + A + +M +KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+V+ N ++C++C GD+ H++R++ I PD +F+ LI+ + + + A +
Sbjct: 578 NVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLF 637
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M + G QP+ +LI L K H +A
Sbjct: 638 DSMLRLGIQPDNYTYGALIKSLCKSGRHDKA 668
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+G + A ++ RD + ++V N+++ +CR G+M+ ++ L E
Sbjct: 480 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 539
Query: 61 ISPDYNTFHILI 72
PD TF+ LI
Sbjct: 540 FRPDIFTFNSLI 551
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D N ++ CR G ++ + +M++++ L P+ T+ ILI F K A++ +
Sbjct: 263 DRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVL 322
Query: 89 VDMHKKGHQPEEELCSSLI 107
M ++ P E SL+
Sbjct: 323 QTMKERNVVPNEATMRSLV 341
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 40/104 (38%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FC G + L R + + D N+++ Y + + + L
Sbjct: 585 LICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLG 644
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
I PD T+ LIK K + A + M + G P+ CS
Sbjct: 645 IQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCS 688
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 56/110 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA++L ++ +A DV+ S++ +CR+G + ++ ++ ++
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD TF +LI KE + A + M ++G P ++L+ L
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +EA++L ++ +A+ DV+ +++ +C +G E + ++ ++
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T +LI K+ + A + + + ++G P+ C++L+ + L
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV----------KGL 417
Query: 121 CLQH 124
C++H
Sbjct: 418 CMKH 421
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 43/78 (55%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA++L ++ +A +V+ S++ +CR+G +E H+ ++ +
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729
Query: 61 ISPDYNTFHILIKYFRKE 78
+ + T+ ++I F KE
Sbjct: 730 VQLNAVTYSVMIHGFCKE 747
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +EA++L ++ +A+ DV+ S++ +CR+G E + ++ ++
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I D T +LI KE + A + M ++G
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA++L ++ +A DV+ S++ +CR+G + ++ ++ ++
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD TF +LI KE + A + M ++G P ++L+ L SEA
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +EA++L ++ +A+ DV+ S++ +C +G E + ++ ++
Sbjct: 171 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG 230
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I PD T +LI F KE + A + M +G
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRG 265
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 43/78 (55%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA++L ++ +A +V+ S++ +CR+G +E H+ ++ +
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885
Query: 61 ISPDYNTFHILIKYFRKE 78
+ + T+ ++I F KE
Sbjct: 886 VQLNAVTYSVMIHGFCKE 903
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +EA++L + +A+ DV+ +++ +C +G E + ++ ++
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T +LI K+ + A + + + ++G + C++L+ + L
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLV----------KGL 573
Query: 121 CLQH 124
C++H
Sbjct: 574 CMKH 577
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A+ + G EE + + + K+D N M+ Y R G ++ V +V+ +L +
Sbjct: 305 MLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRG 364
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LIK + +M A + M +M KG P+ ++LI L + EA+
Sbjct: 365 VEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVKGISPDRVTYANLIAALQRNENFLEAV 424
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++V NS++ +C T +M ++ + ++ + PD T+ LI F K + A
Sbjct: 305 NIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELF 364
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
MHK G P+ + C+ ++ L K HSEA+ L
Sbjct: 365 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 398
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G +A +L +K K DVV N M+ C+ G ++ ++ K++E
Sbjct: 417 ILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG 476
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+++ ++ + + + ++ M KG + LI
Sbjct: 477 CPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 523
>gi|242077973|ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
gi|241940105|gb|EES13250.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
Length = 871
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ +EEA+ L D + VV N+++ +Y R+G+++ + ++ +++E
Sbjct: 238 MIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWNTLISSYARSGELDVAMEMLEQMEESG 297
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A R + M G +P +S I +R S+ +
Sbjct: 298 VAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVEPNGMTIASAISACASLRLLSQGM 357
Query: 121 CLQ 123
L
Sbjct: 358 ELH 360
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G E A +L + E+ K D N+++ G + + + R++ L
Sbjct: 444 MISGYIRNGDDERAFELFQMMESYGVKRDTASWNALIAGSVHNGHSDRALRIFRQMQSLL 503
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
+ PDY T +I F ++A+ + ++H
Sbjct: 504 VRPDYITILSIIPAFAN----LVAFSKVREIH 531
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +T+ ILI F K KM A +MH+K P SSLI
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG ++A+++ +D K +V N M+ +C+ G +E + ++ K+++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 61 ISPDYNTFH-ILIKYFRKEK 79
P+ TF I+I F+K++
Sbjct: 510 CIPNAFTFETIIIALFKKDE 529
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ EA L + K DVV N+++ +C G ++ I ++ ++
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++IL+ KE A + M K +P+ S+L+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 1 MISAFCRGGCFEEA-----KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK 55
+I C G ++A K LA+ F+ Y +++ C+ GD + I +RK
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA-----TLINGVCKIGDTRAAIKFLRK 189
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH---LGK 112
+D PD ++ +I K ++ AY +M KG + ++LI+ +GK
Sbjct: 190 IDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGK 249
Query: 113 MR 114
++
Sbjct: 250 LK 251
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G L + + DV+ +S++ C+ G ++ I + K+ +
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
I P+ TF IL+ K A D+ KG+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
>gi|297723045|ref|NP_001173886.1| Os04g0349600 [Oryza sativa Japonica Group]
gi|255675357|dbj|BAH92614.1| Os04g0349600, partial [Oryza sativa Japonica Group]
Length = 260
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 96 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 155
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + K G P+ L + ++
Sbjct: 156 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 202
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA +L R+ + D+ +N ++C C+ G M+ I + +
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD T++ LI + K A M+ M G +P+
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPD 742
Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 52/106 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ C G +A + D K + + NS++ +C+ G + + ++R++++ +
Sbjct: 610 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 669
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T +++I K+ LA T +DM + G P+ ++LI
Sbjct: 670 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 715
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G EA ++ + VV N+ + +C ME + V++++ E
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ +I F ++ A++ +M +KG P+ SSLI L +MR +EA
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 309
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G +EA L + +K + +++ N ++ CR G M+ ++ ++
Sbjct: 51 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 110
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ + KE + A +M + G P ++LI + K R + A+
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 170
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +EA ++ + K D V N++L YC+ G+ + + ++
Sbjct: 86 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T+ LI K + A M +G +P E ++LI
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 192
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHV---MRKLD 57
+IS CR G +A +A+D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
E ISP TF +LI + K A R +M ++G
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K F K+ M A + M ++ +P+ + + LI LGKM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 385
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 47/93 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F R G + A L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
+ P++ T++ +I+ F + AY M K
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +A + + DVV+ N ++ Y R G ME + V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
ISP+ T++ LI F + + A + +M +KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +T+ ILI F K KM A +MH+K P SSLI
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG ++A+++ +D K +V N M+ +C+ G +E + ++ K+++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 61 ISPDYNTFH-ILIKYFRKEK 79
P+ TF I+I F+K++
Sbjct: 510 CIPNAFTFETIIIALFKKDE 529
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ EA L + K DVV ++++ +C G ++ I ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++IL+ KE A + M K +P+ S+L+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 1 MISAFCRGGCFEEA-----KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK 55
+I C G ++A K LA+ F+ Y L+N + C+ GD I ++RK
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY-ATLINGV----CKIGDTRGAIKLLRK 189
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
+D P+ + +I K ++ AY +M KG + S+LI+
Sbjct: 190 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G L + + DV+ +S++ C+ G ++ I + K+ +
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
I P+ TF IL+ K A D+ KG+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AFC+ G +E K + + K + V NS++ YC ++ + + +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I F K K + A +MH+K P+ SSLI L K S AL
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 121 CL 122
L
Sbjct: 421 QL 422
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA L + +K DVV ++++ +C G ++ I + K+
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQP 98
I PD TF+IL+ F K+ M +T+ D M K+G +P
Sbjct: 291 IKPDVYTFNILVNAFCKDGK-MKEGKTVFDMMMKQGIKP 328
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A+++ D K DV M+ +C G + ++ K+++
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
PD T+ I+I K+ +A + + +M +G
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ FC+ F+EA L ++ K DVV +S++ ++G + + ++ ++ +
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T++ ++ K A + KG QP+ S LI
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC G ++A L + K DV N ++ A+C+ G M+ V + +
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ T++ L+ + K A M + G P+ + S +I K++ EA+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 121 CL---QHVKDIAKD 131
L H K+I D
Sbjct: 386 NLFKEMHRKNIIPD 399
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G A QL + ++ NS+L A C+T ++ I ++ K +
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
PD +T+ ILIK + A + D+ KG+
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
>gi|356498456|ref|XP_003518068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17525, mitochondrial-like, partial [Glycine
max]
Length = 435
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C GC EA ++ E+ DVV N+++ +C G+++ +H +++++
Sbjct: 105 VLEILCNVGCTIEAAEVLDXIESMGGLLDVVAXNTLIKGFCEAGNVKVGLHFLKQMESKG 164
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ +T+++LI F + KM L DM G
Sbjct: 165 CLPNVDTYNVLISGFCESKMLDLVLDLFNDMKTDG 199
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I A+C G ++A ++ RD K K + V+ NS++ YC+ G + V+ + +
Sbjct: 367 LIHAYCTAGRVDDALRI-RDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDW 425
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAH 116
+ PD ++ L+ F K++ ++ A++ +MH KG ++L +FH+G +
Sbjct: 426 NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485
Query: 117 SEALCLQHVKDIAKD 131
L H + +A +
Sbjct: 486 LHIWNLMHKRGVAPN 500
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A+C+ G +EA ++ E + +VV NS++ Y GD+ V+ + E
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321
Query: 61 ISPDYNTFHILIKYF-------RKEKMY--MLAYRTMVDMHKKG 95
I + T+ +LIK + + EK++ M+ VD H G
Sbjct: 322 IPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYG 365
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ F +A +L + K + VV N++L G +E +H+ + +
Sbjct: 437 LLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ T+ L+ F K + A D KG L +++I KM +A
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQA 555
>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 225
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ G ++A L E D++ N++LC +C++ + V+ ++ K+ +
Sbjct: 127 MIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRD 186
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
+SPD + +I+I RK++ Y
Sbjct: 187 MSPDAISCNIVIDMLRKDEKY 207
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A +L + + DVV N M+ +C+ G ++ + K++E
Sbjct: 92 LIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKMEENG 151
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ F + + + M ++ P+ C+ +I L K + E L
Sbjct: 152 CTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQECL 211
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 51/123 (41%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ C+ GC EA + ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 58 LDGLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGL 117
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
D T++I+I F K A M + G P+ ++L+ + E +
Sbjct: 118 QSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVK 177
Query: 122 LQH 124
L H
Sbjct: 178 LLH 180
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 60/138 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 326 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 385
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI + + A R DM + QP S +I L K EA+
Sbjct: 386 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 445
Query: 121 CLQHVKDIAKDRCAMPFM 138
L + ++ D F+
Sbjct: 446 RLLNELNLRPDIAPQAFI 463
>gi|449449535|ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
gi|449518358|ref|XP_004166209.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ G E AK + R + D+ NS++ C +G+++ I++ ++ +L
Sbjct: 254 LVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLG 313
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT+ ILI K A+R + + GH P L ++ + K +A
Sbjct: 314 LCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKGMCKRGQFDDAF 373
Query: 121 CL 122
C
Sbjct: 374 CF 375
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC E+A +L + D ++ +++ + G ++ V+ K+ E
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD +F++LI F ++ AY + +M G +P+ ++LI H K S A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 1 MISAFCRGGCFEEAK-QLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+IS + G + A L++ EA + D+V N ++ +CR ++ ++++++
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSP-DIVSFNVLINGFCRKNKLDEAYEMLKEMENA 585
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T++ LI +F K + A+R M M K+G P
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVP 624
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I A+C G +EA ++ RD + + V+ N ++ + CR ++ + +M +
Sbjct: 632 LIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVK 691
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ NTF+ + K +++ A+ M M + P+
Sbjct: 692 GVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +EAK + + K VV NS++ Y + + + +L
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ ILI F K KM A + +MH K P SSLI L K S AL
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYAL 302
Query: 121 CL 122
L
Sbjct: 303 KL 304
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + + ++V +S+L A C+ +++ I ++ ++
Sbjct: 288 LIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQG 347
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
I P+ T+ ILIK + A + D+ KGH
Sbjct: 348 IQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A+++ D K +V M+ +C G + + ++ K+++
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+ I+I K+ +A + + +M + L + LI
Sbjct: 418 CIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ +EA +L ++ K +VV +S++ C++G + + ++ ++ +
Sbjct: 253 LINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T+ ++ K A + M +G QP
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQP 350
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYN 66
R FE ++++ ++ AK K D + N+++ AYCR G M+ + ++ E + PD
Sbjct: 501 RSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVI 560
Query: 67 TFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T++ + + + M+ A + M K G +P + +S++
Sbjct: 561 TYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVV 601
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G F+E K+ F + D Y N+++ AY R G + + + +++ E I+PD +T+
Sbjct: 300 GVFKEMKRAG--FVPERDTY-----NTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTY 352
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF------HLGKMRAHSEALC 121
+ ++ + ++ + + +M +P E SL+ +G+M A +E +C
Sbjct: 353 NAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEIC 411
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ R G +EA +L DV ++L + R G ES + V ++
Sbjct: 180 LISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239
Query: 61 ISPDYNTFHILIK 73
P+ TF+ LIK
Sbjct: 240 CKPNICTFNALIK 252
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+EA ++ R+ E +V NS++ AY R G ++ + + ++ E I+ D T+ L
Sbjct: 156 KEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTL 215
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKD 131
+ F + A R +M G +P ++LI G +E + V + K+
Sbjct: 216 LSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAE---MMKVFEEIKN 272
Query: 132 RCAMP 136
C +P
Sbjct: 273 SCCVP 277
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S F R G E A ++ + A K ++ N+++ + G ++ V ++
Sbjct: 215 LLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSC 274
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ L+ F + M +M + G PE + ++LI
Sbjct: 275 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLI 321
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G + A +L + ++ K D+V N++L C E +M K+ +
Sbjct: 344 VISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +TF+ +I ++ ++ + + A+ M +KG P S++I L K +AL
Sbjct: 404 RLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQAL 463
Query: 121 CL 122
L
Sbjct: 464 EL 465
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G E+A+++ A N ++ A C G + + V+ +
Sbjct: 134 LVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRG 193
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+PD T++IL++ K + Y A + M +G +P
Sbjct: 194 CAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEP 231
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 56/136 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA Q + + D + S++ A CR + + ++ +L
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++IL+ K A + +M KGH P+ ++LI L K EA
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 121 CLQHVKDIAKDRCAMP 136
L RC +P
Sbjct: 763 RLHGDMSSRVSRCCVP 778
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G FE+A L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 632
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ K A + + +M G P+ SL++ L + +AL
Sbjct: 633 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 692
Query: 121 CL 122
L
Sbjct: 693 QL 694
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 51/120 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA + D A +VV N ++ C+T ME ++ + +
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ +L+ F K A + M +G P +S+I L K EA
Sbjct: 920 VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAF 979
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA + D A +V+ N+++ C+ ME ++ + +
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ +L+ F K A + M +G P +S+I L K EA
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA- 484
Query: 121 CLQHVKDIAKDRCAMP 136
Q D+A +P
Sbjct: 485 -FQMFDDMALKHGLVP 499
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+ C+ G +EA++L ++ K +++ NS L C+ M +MR L +
Sbjct: 786 LINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845
Query: 59 --LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
L +SPD TF LI K A DM G+ P
Sbjct: 846 GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+ C+ G +EA++L ++ K +++ NS L C+ +MR L +
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351
Query: 59 --LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM--- 113
L +SPD TF LI K A DM G+ P ++L+ L K
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411
Query: 114 -RAHS 117
RAH+
Sbjct: 412 ERAHA 416
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G +EAK + + D N+++ A C +E + + R+L
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI K L R +M G P+E + LI HL M AL
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460
Query: 121 CLQHVKDIAKDRC 133
L +K++ + C
Sbjct: 461 DL--LKEMESNGC 471
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV LN+++ A CR + + + ++ ++ A++PD TF L++ F +E A R
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P + LI KM +AL
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 47/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G A L ++ E+ V N+++ A C+ +E V ++D
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS TF+ LI K K A + M K+G QP +S++ H K
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCK 557
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A +L + + + NS+L YC+ GD++ ++ +
Sbjct: 516 LIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANG 575
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI K +A + + M KG +P + + +I L + +AL
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL 635
Query: 121 CL 122
L
Sbjct: 636 SL 637
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++AFC GG ++A +L R E +VV N+++ C+ G ++ K+++
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T+ +LI K + + A + +M +G+ P + ++LI
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLI 309
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV L ++M+ A+C G ++ I + RK++++ ++P+ T++ +I K A++
Sbjct: 196 DVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFK 255
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
M K+ +P LI L K+ EA C+
Sbjct: 256 EKMEKERVKPSLVTYGVLINGLVKLERFDEANCI 289
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G EEA +L ++ + D + N+++ A C+ G +E + ++
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507
Query: 61 ISPDYNTFHILI 72
I PD T+++L+
Sbjct: 508 IQPDMYTYNMLL 519
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +C+ EE ++L ++ + + V+ +++ AYC G+M + +
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG 612
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I T+ LI + A + + +M K+G P ++LI
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALI 659
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G A Q+ D + + V NS++ YC++ ME H++ ++
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ TF +I + + A +++M + +P + L + L+ L + SEA+
Sbjct: 368 GVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAI 427
Query: 121 CL 122
L
Sbjct: 428 EL 429
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC G A + RD + D+V NS++ C+ G ++ +++ KL
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657
Query: 61 ISPDYNTFHILIKYFRKEKMY----MLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
I PD T++ LI + +E + L YR + + G P + + L+++ GK +++
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGV----ENGFVPNDVTWNILVYNFGK-QSN 712
Query: 117 SEALCLQHVK 126
SE + + +
Sbjct: 713 SEGQTITYAQ 722
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G +EA +L D + D + N ++ A C+TG +E + + ++
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T +ILI F A M DM +G P+ +SLI L K EAL
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647
Query: 121 CL 122
L
Sbjct: 648 NL 649
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA C+ G EA + + +K K D+ NS++ CR +ME + + R +
Sbjct: 458 LISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEG 517
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + TF+ LI F + A + + DM +G +E + LI L K A + L
Sbjct: 518 VIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGL 577
Query: 121 CL 122
L
Sbjct: 578 GL 579
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G F A +L D +AK K ++ ++ +C+ G +E ++R++
Sbjct: 388 LVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + ++ LI K A +M KG +P+ +SLIF L ++ +AL
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDAL 507
Query: 121 CL 122
L
Sbjct: 508 AL 509
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E+ L + K ++ N ++ +C G + + + MR +
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ LI K A + +G QP+ ++LI L + A +A
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682
Query: 121 CL 122
L
Sbjct: 683 FL 684
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY-------DVVLLNSMLCAYCRTGDMESVIHVM 53
+++ F R G EA YDK DV ++++ C+ G S + ++
Sbjct: 352 LVNGFVRNGRLNEATAFV------YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELV 405
Query: 54 RKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+D P+ NT+ ILI F K+ A + +M KG ++LI L K
Sbjct: 406 NDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKH 465
Query: 114 RAHSEAL 120
EAL
Sbjct: 466 GKIHEAL 472
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G EA L + ++ K +V+ NS++ A CR G + ++
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI + K+ AY+ M K+G P +SL+ L
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLL----------NGL 229
Query: 121 CLQHVKDIA 129
CL H D A
Sbjct: 230 CLHHQMDHA 238
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ GC EEA + R ++ K + + + ++ + ES + + ++ +
Sbjct: 330 LLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVG 389
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ P+ T++I+I KE + A R V M + G + +E
Sbjct: 390 LVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDE 429
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 42/94 (44%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K DV+ N+++ YC +G E + + RK+ ++P T+ IL+K + A
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKE 310
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+M G P + + L+ L K EA+
Sbjct: 311 LFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E+A QL R K + +L Y ++ D E V +++ +
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + + I+I+ + + +A+ + ++ K G P+ + SSLI L K+ +A+
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAV 683
Query: 121 CL 122
L
Sbjct: 684 GL 685
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I G EEA++ + + D + ++ YC+TG++E ++R++
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ +T+ L++ + K Y + M G +P+ + +I +L +
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 640
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 MISAFCRGGCFEEA---KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
MIS CR G EEA K+ D+ D + L + LC R + +++ LD
Sbjct: 284 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKAL------LD 337
Query: 58 ELAIS---PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
E++ S P+ + L+ F KE A+ + +M G QP + + +LI L K+
Sbjct: 338 EMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKI 396
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + GG E+A+++ ++ K +V NSM+ +C G + ++++++
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRG 427
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ R + A+ + DM +KGH
Sbjct: 428 CNPNFVVYSTLVNNLRNAGKVLEAHEIVKDMVEKGH 463
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG +EAK + D +K + D + + +YC D++S V+ K+
Sbjct: 257 LLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYN 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T++ +IK K + AY+ + +M +G +P+
Sbjct: 317 LLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPD 355
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+GG E A + K +VV ++M+ Y + G E I + + E
Sbjct: 347 LIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESG 406
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LI + K + A DM + G + + ++LI GK + +A
Sbjct: 407 VRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAA 466
Query: 121 CL 122
CL
Sbjct: 467 CL 468
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 60/120 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ RGG +E+++++ + + + + D+ N+++ A C+ G ME +M +
Sbjct: 312 LIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKN 371
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ +I + K + A DM + G +P+ ++LI K+ +AL
Sbjct: 372 ISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 431
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 52/118 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + + GCFEEA L D + + D V N+++ Y + G + + + ++ +
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ D T++ LI + K+ Y A M +G P S+LI K H +
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQD 499
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G F++A +D E K DVV N+++ AY + G + + K+
Sbjct: 417 LIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEG 476
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ LI + K M+ + + G +P+ L SSLI
Sbjct: 477 LVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLI 523
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Query: 1 MISAFCRGGC-FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I A +GG ++A + + + + + D + NS++ R G E V ++
Sbjct: 276 IIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRR 335
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D TF+ LI K LA M M K P S++I GK+ EA
Sbjct: 336 GIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEA 395
Query: 120 LCLQH 124
+ L H
Sbjct: 396 ISLYH 400
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 43/75 (57%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I ++ + G ++ + +F+ K DVVL +S++ + C+ G +E + +++++ +
Sbjct: 487 LIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 546
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ LI +
Sbjct: 547 IQPNIVTYNSLIDAY 561
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I A+C G ++A ++ RD K K + V+ NS++ YC+ G + V+ + +
Sbjct: 367 LIHAYCTAGRVDDALRI-RDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDW 425
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAH 116
+ PD ++ L+ F K++ ++ A++ +MH KG ++L +FH+G +
Sbjct: 426 NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485
Query: 117 SEALCLQHVKDIAKD 131
L H + +A +
Sbjct: 486 LHIWNLMHKRGVAPN 500
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + G F+ A + +D +K + L N+M+C +C+ + + K+ EL
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ LI + K + A + + G E+ +SLI
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLI 613
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A+C+ G +EA ++ E + +VV NS++ Y GD+ V+ + E
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321
Query: 61 ISPDYNTFHILIKYF 75
I + T+ +LIK +
Sbjct: 322 IPENSRTYTLLIKGY 336
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 40/95 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G + A++L K VV N+++ YC+ G + + K+ E
Sbjct: 822 LINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEG 881
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P T+ LI E + + +M K G
Sbjct: 882 ICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA +L R+ + D+ +N ++C C+ G M+ I + +
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD T++ LI + K A M+ M G +P+
Sbjct: 673 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPD 711
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 52/106 (49%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ C G +A + D K + + NS++ +C+ G + + ++R++++ +
Sbjct: 579 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 638
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T +++I K+ LA T +DM + G P+ ++LI
Sbjct: 639 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 684
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA + G EE + R+ K D V N+++ +C+ D+ES VM ++ E
Sbjct: 332 LISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKG 391
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD +F+ +I + KE A + DM ++G P+
Sbjct: 392 CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPD 430
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A +L + K + ++++ A + G E V ++R++ E
Sbjct: 297 LIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++ +I KE A+R M +M +KG +P+
Sbjct: 357 CKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPD 395
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FCR G + A +L R + + + + N+++ +CR DME V++ + +
Sbjct: 341 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD + +I F K A+ + M ++G +P+ S+LI L K A A
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA 459
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G EA L + + DV L++++ A C+ ++S ++R +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD + ILI K K A + M K P+ +S++ L K R ++A
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530
Query: 121 CL 122
L
Sbjct: 531 LL 532
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL- 59
+I CR G A +L ++ +V+L N ++ C ++S + + ++++E
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++ K A R + DM KG P SSL+ L K EA
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002
Query: 120 LCL 122
L
Sbjct: 1003 TAL 1005
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +EA L + ++V N+++ +C+ G ++ H++ ++ +
Sbjct: 989 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048
Query: 61 ISPDYNTFHILIKYFRK---------------EKMY---MLAYRTMVDMHKKGHQPEE-- 100
P+ T+ +L+ F K EK Y + Y +++DM K + E
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108
Query: 101 ELCSSLI 107
+L SS+I
Sbjct: 1109 QLLSSMI 1115
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ +EA ++ + + +V+ +++ +CR GD++ + ++RK+ E
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ T++ ++ F + A++ + M + G P+ S++I GK+R
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 118 EAL 120
+ L
Sbjct: 426 DLL 428
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + + G ++A +L D +K +VV +S+L C+ G ++ +++++
Sbjct: 954 IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
SP+ T++ +I K AY + +M G QP
Sbjct: 1014 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQP 1051
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA L + + +VV +L A+C+ G E I ++ + E
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK-MRAHSEA 119
P+ T++ L+ F K+ A + + M +KG P +++I L K + H
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 120 LCLQHV 125
L L+ +
Sbjct: 1144 LLLEQM 1149
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 447 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 506
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P +T++++I KE+ Y A + + K G P+ L + ++ L K
Sbjct: 507 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLK 558
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A +L + DVV NS++ C+T +M V+ ++ +
Sbjct: 70 LIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG 129
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ T++ LI + M+ + R +M G P C+S I L + EA
Sbjct: 130 IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEA 188
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLDE 58
I A CR +EAK + K K +++ +++L Y G +M S++++M
Sbjct: 176 IHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMV---S 232
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I P++ F+ILI + + M A DM KG P+ +++I L ++ +
Sbjct: 233 KGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 292
Query: 119 ALC-LQHVKDIA 129
AL H+ DI
Sbjct: 293 ALHKFNHMVDIG 304
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+ R G + A ++ + + DVV +++L AY + G + V + + E
Sbjct: 256 LIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG 315
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD NT++ LI+ F + + + D+ G +P+ + L++ GK H A
Sbjct: 316 TEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAA 374
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
E +L R+ E + DVV N ++ AY R G + + +++ E +PD TF L
Sbjct: 232 EGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTL 291
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
++ + K Y DM ++G +P+ ++LI G+ E++ L
Sbjct: 292 LEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINL 342
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA G EEA + R D + N+++ Y + E V ++R++++
Sbjct: 186 LLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAG 245
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD ++ILI+ + + Y A + M + G P+ S+L+ GK + E
Sbjct: 246 NAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVR 305
Query: 121 CL 122
L
Sbjct: 306 LL 307
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 38/72 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI R G ++A +L D +++V +++ AY R G E+ +H++ ++
Sbjct: 80 MIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREK 139
Query: 61 ISPDYNTFHILI 72
++P+ T++ +I
Sbjct: 140 VTPNLITYNTVI 151
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G FE+A L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++L+ K + +M G PE SL++ L + +AL
Sbjct: 429 VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDAL 488
Query: 121 CL 122
L
Sbjct: 489 QL 490
Score = 41.6 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EE + + + + + S++ A CR + + ++ KL
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++IL+ K A + +M KGHQP+
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 537
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ +EA +L ++ +VV NS++ C++ + ++
Sbjct: 299 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD TF+ILI K + A +M K QP+ +LI L K
Sbjct: 359 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCK 410
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+S FC+ G +EAK + K K +VV +S++ YC ++ + + + +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
+PD +++ILI F K KM A +MH + P +SLI L K S AL
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 122 L 122
L
Sbjct: 346 L 346
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+GG E+A+ + D K +V M+ +C G + ++ K++E
Sbjct: 400 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 459
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ T+ I+I+ + A + +++M +G
Sbjct: 460 CIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRG 494
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + + D++ +S+L A C+ + I ++ KL +
Sbjct: 330 LIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQG 389
Query: 61 ISPDYNTFHILI 72
+ P+ T+ ILI
Sbjct: 390 LQPNMYTYTILI 401
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEA +L +FEA D V +++ AYC++G+M+ ++ ++
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P TF++L+ F M + + M KG P + L+
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G EA +L + + + D++ ++ YC+ G ++ V + +
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI KE A + +M K G QP +S++ L K EA+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 121 CL 122
L
Sbjct: 935 KL 936
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA L E K DV+ ++++ YCR G+++ V ++ K+ +
Sbjct: 675 VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P+ T+ +I + A +M +G P+ + ++L+ G +RA S
Sbjct: 735 LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794
Query: 118 EALCLQHVKDIAKD 131
+ H +DI D
Sbjct: 795 KFFYEMHSRDITPD 808
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A +L + + ++ NS++ C++G++E + ++ + +
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++ D T+ L+ + K A + +M KG QP
Sbjct: 945 LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G A + + ++ DV+ +++ +C+ GDM + ++
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD TF L+ + K A+R M + G P ++LI L K
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G EEAK + D N+++ A C +E + + R+L
Sbjct: 342 VINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE--------ELCSS 105
+SP+ TF+ILI K LA R +M G P+E LCSS
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV N+++ A CR + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLK 254
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P + LI K+ +AL
Sbjct: 255 ARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A +L ++ + + V NS+L YC+ G++ +++ +
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI K + A + + M KG +P + + +I L + +AL
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636
Query: 121 CL 122
L
Sbjct: 637 SL 638
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G E A QL + + + DVV +S++ A C TG++ + R+ E A
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA 170
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD F+IL+ K A + + +M ++G P+ +SLI L K EA
Sbjct: 171 --PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEA 227
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ EA+Q+ + + DVV NS++ C++ ME ++ + +
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T++ LI + K LA++ + M + G P+ +SLI
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ GC A QL DVV NS++ +C+ ++ V+ + +
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ T+++LI A + +M +G P+ +SLI
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLI 355
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G EA +L + + + D++ NS++ +CR +E + + E
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD ++ L K + + A+ + +M G P
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ EEA+QL + + ++V N+++ YC+TG ++ ++ +
Sbjct: 214 LIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSG 273
Query: 61 ISPDYNTFHILIKYF 75
PD TF+ LI F
Sbjct: 274 THPDVVTFNSLISGF 288
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 48/75 (64%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +GG ++EA ++ R+F++ + DVVL ++++ A C+ G + S + ++ ++ +
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 61 ISPDYNTFHILIKYF 75
ISP+ T++ +I F
Sbjct: 580 ISPNVVTYNSIIDAF 594
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G EEA + R+ + K DVV N++L Y + G + V V ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ T+ LI + K +Y A + G + + L S+LI L K
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ RGG +E A+ L + + + DV N++L A C+ G M+ ++ ++
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 61 ISPDYNTFHILIKYFRK------------EKMYM------LAYRTMVDMHKKGHQPEEEL 102
I P+ ++ +I F K E Y+ ++Y T++ ++ K + EE L
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + R+ A+ + + N ++ + R GD+ +M+++++
Sbjct: 685 LLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEG 744
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K + A +TM +M G +P + ++LI +AL
Sbjct: 745 VQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKAL 804
Query: 121 -CLQHVK 126
C + +K
Sbjct: 805 SCFEELK 811
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K DVVL N+++ A+C G+M+ IH+++++ + P TF +I F + A
Sbjct: 536 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALE 595
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P ++L+ L + R +A+
Sbjct: 596 IFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAV 629
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 53/131 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + + D+ S + A C+ GDM M +++
Sbjct: 720 LIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAG 779
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI + + A ++ G +P++ + L+ L +EA
Sbjct: 780 VKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAY 839
Query: 121 CLQHVKDIAKD 131
+ I ++
Sbjct: 840 IYSGILSICRE 850
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G EEAK A + DV NS+ A C +GD+E + ++
Sbjct: 264 LVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ ++I K A+R + GH+P L +++I L K ++A
Sbjct: 324 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 383
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G EEAK A + DV NS+ A C +GD+E + ++
Sbjct: 260 LVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 319
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ ++I K A+R + GH+P L +++I L K ++A
Sbjct: 320 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 379
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR GC + A L ++ E K K VV NS++ C+ G +++ +
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P+ TF++L+ F KE A +M +G P
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 528
Query: 61 ISPDYNTFHILIK 73
+P+ T++ LI+
Sbjct: 529 NAPNDCTYNTLIR 541
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I ++ A
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK 112
+M KG + +SL+ L K
Sbjct: 242 KEMETKGIKSSVVTYNSLVRGLCK 265
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ GC +A L D AK DV N+++ YC+ ME+ I ++ K+
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491
Query: 61 ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
++PD T++ ++ K + E + M + TMV+ KG P + + L L K
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDL-METFETMVE---KGCVPNKITYNILTESLCKAGKV 547
Query: 117 SEALCL 122
+EAL L
Sbjct: 548 NEALDL 553
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 49/121 (40%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I CR G A + + DVV N+++C C+ ++ + KL +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
PD T++ LI + K M A + + KG P+E SLI L + AL
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377
Query: 122 L 122
L
Sbjct: 378 L 378
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G EA ++ + VV N+ + +C ME + V++++ E
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ +I F ++ A++ +M +KG P+ SSLI L +MR +EA
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G +EA L + +K + +++ N ++ CR G M+ ++ ++
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ + KE + A +M + G P ++LI + K R + A+
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +EA ++ + K D V N++L YC+ G+ + + ++
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T+ LI K + A M +G +P E ++LI
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 396
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G EA ++ + K + N ++ +CR G++ ++ +++
Sbjct: 620 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 679
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T LIK KE M + D + E EL L+ + + EA+
Sbjct: 680 FVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLV-EINHKEGNMEAV 738
Query: 121 CLQHVKDIAKD 131
L + D+AKD
Sbjct: 739 -LNVLTDMAKD 748
>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
gi|194696880|gb|ACF82524.1| unknown [Zea mays]
gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 421
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHV---MRKLD 57
+IS FC+ G +A +A++ A V N+++ YC+ G + + HV ++++
Sbjct: 74 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 133
Query: 58 ELAISPDYNTFHILIKYF 75
+ ISPD TF++LI +
Sbjct: 134 QAGISPDVVTFNVLINGY 151
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G +A +L + K + V +++C C+ M + ++ EL
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ T+++LI+ +E A+ + +M KKG P+ LI L SEA
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEA 594
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G EAK+ D K+ + D + ++L +C+ G ++ + +++
Sbjct: 581 LIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRG 640
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D ++ +LI + +L + + +MH KG QP+ + + LI
Sbjct: 641 LQMDLVSYAVLISGALNQNDRIL-FELLREMHGKGMQPDNVIYTILI 686
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 48/115 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C F +AK++ E +V N + C++ + + V R L E
Sbjct: 231 VVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKG 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
+ D T+ L+ + + + + M +M + G+ P E S LI L KM +
Sbjct: 291 LKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGS 345
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+V LN ++CA+C+ G +E I V +K++ + SP +++ LI + + + +
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239
Query: 89 VDMHKKGHQPEEELCSSLI 107
+ M K G +P++ ++LI
Sbjct: 240 ILMEKNGVRPDDVTFNTLI 258
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
AFC+ G E+A ++ + E + N+++ YC G + S + + +++ + P
Sbjct: 190 AFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRP 249
Query: 64 DYNTFHILIKYF 75
D TF+ LI F
Sbjct: 250 DDVTFNTLINGF 261
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 41 CRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M KKG P
Sbjct: 941 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1000
Query: 101 ELCSSLIFHLGKMRAHSEA 119
+SLI HLGK +EA
Sbjct: 1001 YTYNSLILHLGKAGKAAEA 1019
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 38/64 (59%)
Query: 36 MLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + K + AYR + M +G
Sbjct: 201 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 260
Query: 96 HQPE 99
+P+
Sbjct: 261 CKPD 264
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 439 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 498
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
DM + P+ +SLI L K EA
Sbjct: 499 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 529
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ EA +L + F++ L NS++C ++ + ++ EL
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++L+ K + +MH+KG++ +++I L K R +A+
Sbjct: 786 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845
Query: 121 CL 122
L
Sbjct: 846 DL 847
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 47/75 (62%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +GG ++EA ++ R+F+ K DVVL ++++ A C+ G +ES + ++ ++ +
Sbjct: 477 LIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEG 536
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ +I F
Sbjct: 537 IRPNVVTYNSIIDAF 551
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G FE+A + ++ E + DVV N++L Y + + V V ++
Sbjct: 407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGR 466
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+SP+ T+ LI + K +Y A + + G + + L S+LI L K
Sbjct: 467 VSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCK 518
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
+++ RGG +E A++L F A DK D+ N++L A C+ G M+ +M ++
Sbjct: 302 LLAVCSRGGLWEAARRL---FSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMP 358
Query: 58 ELAISPDYNTFHILIKYFRK 77
I P+ T+ +I + K
Sbjct: 359 TKNILPNVVTYSTMIDGYAK 378
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 55/118 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG + A ++ + K +VV ++M+ Y + G ++ +++ ++ L
Sbjct: 337 LLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG 396
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ D +++ L+ + K + A +M G + + ++L+ GK + E
Sbjct: 397 VGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDE 454
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EA QL + DVV N+++C YC+ G M ++ ++
Sbjct: 328 LMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNG 387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I PD T +LI+ +RKE + A +V++ K G
Sbjct: 388 IFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFG 422
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
FC+ G ++ E + + D+V N+++ YC G + ++ R + + PD
Sbjct: 262 FCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPD 321
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++ L+ KE A++ + M +G P+ ++LI
Sbjct: 322 LVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLI 364
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G E+A ++ + A + ++++ N++L C+ G ME + +M+++ E
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ +LI+ + + A+ + +M K+ P
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 423
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MISA C+ G ++AK++ + K ++V N ++ CR ++ I + R + +
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ ILI F EK A +++M G +PE ++LI
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G ++A QL + K D+V N ++ C+ G++E ++ ++
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++P+ T+ ++ + K K A++ + +M +G P+
Sbjct: 701 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E AK L D E + + V +M+ YC++ + + ++ ++
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ PD +++++ + KE+ + A +M +KG
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 1 MISAFCRGGCFEEAKQLARD-FEAKYDK--YDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
+I FC C EE + A D F+ +K V N+++ YC++G ++ H++ ++
Sbjct: 745 VILNFC---CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMI 801
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMR 114
E P++ T+ LI + K M A R ++M ++ P + +SL+ ++G M
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861
Query: 115 AHSEALCLQHVKDIAKDR 132
S K I D+
Sbjct: 862 EVSALFEEMVAKGIEPDK 879
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G E+A ++ + A + ++++ N++L C+ G ME + +M+++ E
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ +LI+ + + A+ + +M K+ P
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 414
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G ++A QL + K D+V N ++ C+ G++E ++ ++
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++P+ T+ ++ + K K A++ + +M +G P+
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E AK L D E + + V +M+ YC++ + + ++ ++
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ PD +++++ + KE+ + A +M +KG
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 1 MISAFCRGGCFEEAKQLARD-FEAKYDK--YDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
+I FC C EE + A D F+ +K V N+++ YC++G ++ H++ ++
Sbjct: 736 VILNFC---CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMI 792
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMR 114
E P++ T+ LI + K M A R ++M ++ P + +SL+ ++G M
Sbjct: 793 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 852
Query: 115 AHSEALCLQHVKDIAKDR 132
S K I D+
Sbjct: 853 EVSALFEEMVAKGIEPDK 870
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 41 CRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M KKG P
Sbjct: 1020 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1079
Query: 101 ELCSSLIFHLGKMRAHSEA 119
+SLI HLGK +EA
Sbjct: 1080 YTYNSLILHLGKAGKAAEA 1098
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 39/64 (60%)
Query: 36 MLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + + + AYR + +M +G
Sbjct: 280 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG 339
Query: 96 HQPE 99
+P+
Sbjct: 340 CKPD 343
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 518 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 577
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
DM + P+ + +SLI L K EA
Sbjct: 578 YDMIENNCVPDVLVVNSLIDTLYKAGRGDEA 608
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ GC +A L D AK DV N+++ YC+ +++ I ++ ++
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ ++ K Y T M +KG P + L K R EAL
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550
Query: 121 CL 122
L
Sbjct: 551 NL 552
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G + A Q+ RD K D S++ C+ GD++ I+V + E
Sbjct: 326 IIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKG 385
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ + L+K ++ + + A + M +M + G P+ + +I L K+ S+A
Sbjct: 386 LKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I FC+ EA +L D + DV+ N+++C C+ + H +RK+
Sbjct: 258 IQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD T++ +I + K M A + + D KG P+E SLI L
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGL 365
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE-L 59
+ +FC+ EEA L + + K DVV +++ +C GD++ + +++DE
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
S T++I+I F + +A + M + G P+
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPD 635
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G + A + + K K ++VL N+++ + G + + +M ++ E
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPD T++++I K A ++D KGH P+ ++LI
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ + A ++ DV+ NS+L C+ G E V+ + + E
Sbjct: 466 LIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKG 525
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T++IL + F K + A + +M KG P+
Sbjct: 526 CVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ EA+ R + + D NS++ YC+ G M++ ++R
Sbjct: 291 LICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKG 350
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +T+ LI ++ A + +KG +P LC++L+ L + + L
Sbjct: 351 FVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQ-----QGL 405
Query: 121 CLQHVK---DIAKDRCA 134
LQ +K +++++ C+
Sbjct: 406 ILQALKLMNEMSENGCS 422
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G +EAK + K DV N+++ Y +++ HV + +
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++PD +T+ ILI F K KM A +MH+K P+ SSL+ L K
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG ++A+++ +D K DV + N M+ +C+ G +E + ++ K++E
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757
Query: 61 ISPDYNTFHILIK-YFRKEK 79
P+ TF I+I F+K++
Sbjct: 758 CIPNAVTFDIIINALFKKDE 777
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 53/125 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +EA A+ + + V +++ CR GD + I +RK+D
Sbjct: 69 LIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRL 128
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ +I K ++ AY +M KG S+LI+ + EAL
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188
Query: 121 CLQHV 125
L +V
Sbjct: 189 GLLNV 193
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G L + + DV+ NS++ C+ G ++ I + K+ +
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF IL+ K A D+ KG+ + + + +I+ K EAL
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747
Query: 121 CL 122
+
Sbjct: 748 TM 749
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ EA L + K DVV ++++ +C G ++ I ++ ++
Sbjct: 453 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT 512
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD T+ IL+ KE A + M K +P+
Sbjct: 513 INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPD 551
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EAK + K +V+ ++++ Y +++ HV + +
Sbjct: 209 LVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 268
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++++I+I F K K A +M P + + ++ KM+ +S A+
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF-NKILDSFAKMKHYSTAV 327
Query: 121 CLQH 124
L H
Sbjct: 328 SLSH 331
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 46/108 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++A A+ + + V +++ C+ GD I ++RK+D
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
P+ + +I K ++ AY +M KG + S+LI+
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L E K + DV NS+ C+ + ++ + E
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ +F LI + KE ++ A R +M +KG+ P + LI K EA
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA- 528
Query: 121 CLQHVKDIAKDRCAMP 136
+KD ++R +P
Sbjct: 529 --HKLKDELENRGLIP 542
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 38/158 (24%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDME------------- 47
+I +C+ G F EAK++ R+ E K + +++ N ++ Y + G+M+
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Query: 48 ---------SVIH----------VMRKLDEL---AISPDYNTFHILIKYFRKEKMYMLAY 85
S+IH ++ DE+ + P+ T+ +I K+ A+
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599
Query: 86 RTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQ 123
+ +M + G P++ + SSL+ G + + E++ +Q
Sbjct: 600 KLYDEMKETGLTPDDTVYSSLV---GSLHSADESISMQ 634
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 3 SAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
S C+ +EAK L + + + +++ YC+ G+ V R+++E
Sbjct: 447 SGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 506
Query: 63 PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+++LI + K A++ ++ +G P+ C+SLI
Sbjct: 507 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 551
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F G EEA++L + K + DV + S++ CR+G+++ + + ++ +
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P +T+ LI K A + +M KG + ++LI + EAL
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL 424
Query: 121 CLQHV 125
LQ V
Sbjct: 425 RLQVV 429
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G +EAK + K DVV NS++ YC ++ + +
Sbjct: 317 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRG 376
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ I+I F K KM A + +MH K P SSLI L K S AL
Sbjct: 377 VTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYAL 436
Query: 121 CLQHVKDIAKDRCAMP 136
+ D DR P
Sbjct: 437 ---ELNDEMHDRGQQP 449
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ +A L + +K DV N+++ +C G ++ I + K+
Sbjct: 247 IIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSEN 306
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD TF+IL+ F KE A + M K+G +P+ +SL+
Sbjct: 307 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353
Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A+ + D K V M+ +C G + + ++ K+ +
Sbjct: 473 LIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNC 532
Query: 61 ISPDYNTFHILIK 73
P+ T+ I+I+
Sbjct: 533 CIPNAVTYEIIIR 545
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G ++A +L D ++ ++ S+L +CR G M +V+ +++E
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMRF-PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + L+ + AY + DM ++G +P + LI L K+ EA+
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L E K + DV NS+ C+ + ++ + E
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ +F LI + KE ++ A R +M +KG+ P + LI K EA
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA- 524
Query: 121 CLQHVKDIAKDRCAMP 136
+KD ++R +P
Sbjct: 525 --HKLKDELENRGLIP 538
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G F EAK++ R+ E K + +++ N ++ Y + G+M+ + +L+
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T LI + +A + +M ++G P +++I L K EA
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595
Query: 121 CL 122
L
Sbjct: 596 KL 597
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 3 SAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
S C+ +EAK L + + + +++ YC+ G+ V R+++E
Sbjct: 443 SGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 502
Query: 63 PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+++LI + K A++ ++ +G P+ C+SLI
Sbjct: 503 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 547
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F G EEA++L + K + DV + S++ CR+G+++ + + ++ +
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P +T+ LI K A + +M KG + ++LI + EAL
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL 420
Query: 121 CLQHV 125
LQ V
Sbjct: 421 RLQVV 425
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +++ ILI F K KM A +MH+K P SSLI
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG ++A++ +D K DV N M+ +C+ G +E + ++ K++E
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG 509
Query: 61 ISPDYNTFHILIK-YFRKEK 79
P+ TF I+I F+K++
Sbjct: 510 CVPNAVTFDIIINALFKKDE 529
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 47/108 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A A+ K+D V +++ C+ GD I ++RK+D
Sbjct: 135 LIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRL 194
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
P+ ++ +I K ++ AY +M KG + ++LI+
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIY 242
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ EA L + AK DVV +++ +C ++ I ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++IL+ KE A + M K +P+ S+L+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEA Q RD +K +VV N +L + C G E ++ ++D
Sbjct: 243 LLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEE 302
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SP T++ILI A++ + +M + QP + +I HL K
Sbjct: 303 RSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCK 354
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G F++A +D E K DVV N+++ AY + G + + K+
Sbjct: 416 LIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEG 475
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ LI + K M+ A V+ + G +P+ L SSLI
Sbjct: 476 LVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLI 522
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + + GCFEEA L D + + D V N+++ Y + G + + + ++ +
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D T++ LI + K+ Y A M +G P S+LI K H +A
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDA 499
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ RG +E+++++ + + + + D+ N+++ A C+ G ME +M +
Sbjct: 311 LIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKN 370
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ +I + K + A DM + G +P+ ++LI K+ +AL
Sbjct: 371 ISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 430
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+GG E A + K +VV ++M+ Y + G E I + + E
Sbjct: 346 LIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESG 405
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +++ LI + K + A DM + G + + ++LI GK + +A
Sbjct: 406 VRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 464
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 44/75 (58%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+ + G ++A + +F+ K DVVL +S++ + C+ G +E + +++++ +
Sbjct: 486 LIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 545
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ LI +
Sbjct: 546 IQPNIVTYNSLIDAY 560
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD--- 57
++S+FC+ +EA++L K DVV NS + A CR G + + R +
Sbjct: 225 LVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284
Query: 58 ELAI-SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
EL + P+ TF++++K F +E M M R++V+ KKG
Sbjct: 285 ELGLPKPNVVTFNLMLKGFCQEGM-MEEARSLVETMKKG 322
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EEAK+ + AK D V ++ + +C+ G + S + V++ ++
Sbjct: 531 LINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG 590
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
S T++ LI + Y M +M ++G P+
Sbjct: 591 CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPD 629
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ FC+ G EEA+ L + + + N+ L R G + V+ ++ E
Sbjct: 299 MLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ +++I++ + M + A R M M G P+ ++L+
Sbjct: 359 IEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL 405
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA +L ++ + + VV+ +S++ YCR G++ ++ ++ +
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P T++I++ K+ A + D+ +G+ P+ ++LI L K EA
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREA 465
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G EEA ++ + DV+ NS++ A C G V+ L ++
Sbjct: 210 LVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG---KVVEAAEILKTMS 266
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SPD TF+ L+ F K M A + +M ++ P+
Sbjct: 267 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G EA ++ + D +V N++L +C+ G + + V+ ++
Sbjct: 245 IIHALCVAGKVVEAAEILKTMSCSPD---LVTFNTLLDGFCKAGMLPRALEVLEEMCREN 301
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ IL+ + +A+ + ++ ++G+ P+ +SL+ L K EA
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAH 361
Query: 121 CLQHVKDIAKDRC 133
L VK+++ C
Sbjct: 362 KL--VKEMSVRGC 372
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+IS C+ G E+A++L + K K D+V N+++ A+ R + K+
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRA 115
I+PD T +IL+ K+ A + M G P+ +S+I L GK+
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257
Query: 116 HSEAL 120
+E L
Sbjct: 258 AAEIL 262
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCRGG + A ++ ++ + + D V ++++C C+ G + +R++
Sbjct: 421 LIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T+ +++ F K+ ++ + +M GH P
Sbjct: 481 MKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPN 519
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 51/100 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G A+ + + + D V +++ +CR GD+++ + + +++D+
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNG 445
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I D F LI KE + A R + +M + G +P++
Sbjct: 446 IELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDD 485
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G +A+++ + + + VV N+++ YC+ G+++ + +++
Sbjct: 246 LMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR 305
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ LI KE A+R +M ++G P + + ++LI
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLI 352
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G ++A++L + A DV S++ +C+ G M V++++ +
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+ LI F + +AYR + +M G QP SLI
Sbjct: 577 CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+G +EA+Q+ E + +V+ +S++ C+TG + V +++
Sbjct: 342 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 401
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ T++ LI F A M +M G P+ ++LI L K EA
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 460
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A+++ + + + +VV NS++ +C T ++S + +M ++
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
PD T++ LI K A R DM K P+ S LI K+
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 489
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ + A+ L D + DVV ++++ YC G ++ ++ ++
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPD T+ L+ F K + A R + M K+G QP ++LI
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA +L D +AK+ DV+ + ++ +C+ ++ + + + A
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 506
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD TF L++ + + A R + +M P+ +SL+ K+ EA
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR + A +L R ++V N++L CR G M+ ++ ++ E
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD ++ L+ K +A + D P+ S+LI L K EA
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEA 320
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A ++ D DVV ++++ C+ G ++ + K+ E +
Sbjct: 272 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENS 331
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
PD TF L+ K A + + M + P SSLI L G++R
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391
Query: 118 E 118
E
Sbjct: 392 E 392
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S CR G +EA +L + + + D ++++ C+TG ++ + V
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + LI K A + M + +P+ ++L+ L K EA
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA- 355
Query: 121 CLQHVKDIAKDRCAMP 136
Q V + +DR P
Sbjct: 356 --QQVLETMEDRNCTP 369
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 50/100 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ A L ++ + +VV ++++ +CR +++ + R++ E
Sbjct: 167 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 226
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
P+ T++ L+ + + AY + +M ++G QP++
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDK 266
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFCR G A +L + + +V+ S++ +C TGD+E ++ +L+
Sbjct: 587 LIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLER-- 644
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD 90
D N K M AYR M+D
Sbjct: 645 ---DENC-----------KADMFAYRVMMD 660
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 18 ARDFEAKYDKYDVV----------LLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNT 67
ARDF+ + +DV+ N+++C R G +E + ++ ++ + + P T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 68 FHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ I YF K A T M KG P C++ ++ L +M EA
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G E AK+L +A K D V+ ++L + GD+++ +++
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF IL+ K + + A+ T M K+G P ++LI L + +AL
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 121 CL 122
L
Sbjct: 423 KL 424
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G EEA +L + K + + N ++ Y + GD E+ + +++
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ IL+ A ++ G P+ + +I LGK + EAL
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 121 CL 122
L
Sbjct: 1019 AL 1020
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ R G ++A L + + + + N +L YC +G + I + RK+
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG 271
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ L+ Y K M A + M KKGH+P+ + +L+
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLL 318
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVM-RKLDEL 59
MI +C+ G E AK++ F+ K +++ N+M+ +C+ GDMES V R +
Sbjct: 200 MIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGE 256
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
P++ T+ LI + K+ A + M +M +G +P E +++I+ L
Sbjct: 257 DCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 307
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C G +EAK L K +V SML C G + + +R + E
Sbjct: 303 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD ++ ++I F K A + +M +G +P
Sbjct: 363 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 400
Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +EA L ++ A+ K V N++ G+++ I +++++ ++
Sbjct: 373 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 432
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLI 107
P++ +++ +I K M +VD M + GH + + S L+
Sbjct: 433 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 480
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 48/75 (64%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +GG ++EA ++ R+F++ + DVVL ++++ A C+ G + S + ++ ++ +
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 61 ISPDYNTFHILIKYF 75
ISP+ T++ +I F
Sbjct: 580 ISPNVVTYNSIIDAF 594
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G EEA + R+ + K DVV N++L Y + G + V V ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREH 509
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ T+ LI + K +Y A + G + + L S+LI L K
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCK 561
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ RGG +E A+ L + + + DV N++L A C+ G M+ ++ ++
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKR 404
Query: 61 ISPDYNTFHILIKYFRK------------EKMYM------LAYRTMVDMHKKGHQPEEEL 102
I P+ ++ +I F K E Y+ ++Y T++ ++ K + EE L
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEAL 464
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR EA +L + + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF LI + K A R M + G QP + ++LI L K R S A+
Sbjct: 454 CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAI 513
Query: 121 CL 122
L
Sbjct: 514 EL 515
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G F +L + VV +++ YC+ G ++ + + R +DE
Sbjct: 429 LLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESG 488
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P+ ++ LI + K + LA +M +K H P
Sbjct: 489 IQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREK-HVP 525
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G +EA ++ R + + + V+ N+++ C++ D I + ++ E
Sbjct: 464 LIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKH 523
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ + TF+ L+K R + M A+ M D+ ++G
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELM-DLMREG 557
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S F R E+A ++ + ++V NS++ Y R GD +++ +
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
ISPD +++ +IK F K+ + A R + +M G QP
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQP 761
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA R G +EA++ D + K NSML + + G +++++++++
Sbjct: 314 VISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNN 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ + + + + M KG P +++I GK +AL
Sbjct: 374 CEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKAL 433
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRK-EKMYMLAYRT 87
DV ++L AY RTG + I + K+ E + P T+++++ + K + + +
Sbjct: 236 DVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILEL 295
Query: 88 MVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ +M KG + +E C+++I G+ EA
Sbjct: 296 LDEMRSKGLEFDEFTCTTVISACGREGILDEA 327
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G +A+++ +D + DVV N+++ +C+ G ++ I ++ ++
Sbjct: 699 LIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANG 758
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF+ + + ++ A + M + G P E +I K + H EA+
Sbjct: 759 VQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAM 818
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 5/142 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ F + G + EA + ++ E + D + N ++ AY R G + V+ +
Sbjct: 349 MLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE-- 118
+ P+ T+ +I + K A M + G P ++++ LGK R+ SE
Sbjct: 409 VMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGK-RSRSEDM 467
Query: 119 --ALCLQHVKDIAKDRCAMPFM 138
LC + DR M
Sbjct: 468 IKILCDMKLNGCPPDRITWNTM 489
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
N+++ AY R G V + ++ +P T++ L+ + + A ++DM K
Sbjct: 522 NTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRK 581
Query: 94 KGHQPEEELCSSLIFH 109
KG +P E SL+ H
Sbjct: 582 KGFKPNET-SYSLLLH 596
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
GC E EA +L + K K + V N M+ YC+ G M+ + + K++E SP
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI + K A+RTM +M +K + + ++++ L + + EA
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 51/102 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G E+A +L + +K D V N+++ + C+ G ++ +++ +++E
Sbjct: 599 LLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD+ T++ +I A M M +KG+ P++ L
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ +C+ G ++A E D V N+++ YC+ G+M M ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T + +++ +EK AY+ + K+G+ +E +LI
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A + D N++L YCR GD+E K+ E +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 61 ISPDYNTFHILIK 73
PD T +IL++
Sbjct: 589 FKPDVFTCNILLR 601
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
GC E EA +L + K K + V N M+ YC+ G M+ + + K++E SP
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI + K A+RTM +M +K + + ++++ L + + EA
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 49/102 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G E+A +L + +K D V N+++ + C+ G ++ +++ +++E
Sbjct: 599 LLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD+ T++ +I A M M +KG P + L
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ +C+ G ++A E D V N+++ YC+ G+M M ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T + +++ +EK AY+ + K+G+ +E +LI
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A + D N++L YCR GD+E K+ E +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T +IL++ E M A + KG + ++LI L K
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 59/124 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C+ G E+A +L + K + + NS++ Y R +E I V+R++
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P +++ +I K + + AY ++ +M ++G +P+ S LI L + AL
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554
Query: 121 CLQH 124
L H
Sbjct: 555 NLWH 558
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ EA+ + + K++ DV++ S++ +CR GD+ V R++
Sbjct: 224 VISILCKKRRAVEAQSFFDNLKHKFEP-DVIVYTSLVHGWCRAGDISEAESVFREMKMAG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI-FHLGKMRAHSEA 119
ISP+ T+ I+I + A+ +M G P ++LI HL RA
Sbjct: 283 ISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHL---RAGRTE 339
Query: 120 LCLQHVKDIAKDRCAMPFMRKFFIF 144
LQ + + RCA + F+
Sbjct: 340 KVLQVYNQMKRLRCAADLITYNFLI 364
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISAFC A Q + + D V+ S++ C G M V+ KL
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAG 528
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
S D + +++LI F K+K Y + +M + G +P+ ++LI +LGK
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G +A + + D N ++ +C+ +E V ++ +++E
Sbjct: 504 LISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETG 563
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T++ LI Y K + A + M M K+G +P
Sbjct: 564 VKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+ V+ N ++ A CR D++ I +M + + P+ T++ ++K R +KM A+ M
Sbjct: 638 NTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELM 697
Query: 89 VDMHKKGHQPE 99
M ++ +P+
Sbjct: 698 DRMVEEACRPD 708
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ E +L + E K D + N+++ +TGD + VM K+ +
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598
Query: 61 ISPDYNTFHILIKYFRKEK 79
+ P T+ +I + +K
Sbjct: 599 LRPSVVTYGAIIHAYCSKK 617
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G EEA ++ AK + V N ++CA C+ G++E + + ++
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
PD TF+ LI K A DM +G
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS CR G +A + +D + D+V NS++ C+ G ++ ++ KL
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I PD T++ LI E M+ A + G P E S LI ++ K
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EEA QL + K K D+ NS++ C+ ME + + +
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ L+ F A++ + +M +G + + LI L K A + L
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGL 572
Query: 121 CL 122
L
Sbjct: 573 GL 574
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + G A +L + AK + +V+ ++ +C+ G +E ++ +
Sbjct: 383 MIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG 442
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ LI K+ A + +M KG +P+ +SLI L K EAL
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEAL 502
Query: 121 CLQH 124
L H
Sbjct: 503 SLYH 506
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G EA L + + DVV+ +++ C+TG + I ++R +++
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD + LI K++ A+ +M KG P C+SL++ L
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYAL 259
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G E+A+ L + +K K +V N M C+ G ++ + ++DE A
Sbjct: 465 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
S D T++ + + F + A + + +M +G
Sbjct: 525 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
+ L+R ++ ++V LN ++ ++C + V+ K+ +L PD +F
Sbjct: 90 YSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTT 149
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAK 130
LIK E A M +G QP+ + ++LI L K S A+ L ++ + K
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRL--LRSMEK 207
Query: 131 DRC 133
C
Sbjct: 208 GNC 210
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 1 MISAFCRGGC-FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++ +C C EAK+ E K DVV SM+ + + G + SV+ + ++E
Sbjct: 246 VLNGWCNIVCSLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEA 305
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ ++ K + A + M +K P+ +SLI L K R EA
Sbjct: 306 GVAPDRKVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEA 365
Query: 120 LCLQHVKDIAKDRCAMPFMRKF 141
+ + D +R P +R F
Sbjct: 366 M---EMFDAMLERGLSPSVRTF 384
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A +G C + AK L R E K D NS++ C+ ++ + + + E
Sbjct: 317 IVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDAMLERG 376
Query: 61 ISPDYNTFHILIKYFRK 77
+SP TFH L+ R
Sbjct: 377 LSPSVRTFHALLNVARN 393
>gi|383157596|gb|AFG61137.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157602|gb|AFG61140.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157606|gb|AFG61142.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157616|gb|AFG61147.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+G +EA L + ++ K D+ N ++ +Y + G ME V K++
Sbjct: 4 VITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKIENDN 63
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I + ++ ILI F ++ A+ ++ K G P ++ S LI
Sbjct: 64 IKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLI 110
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G E A +L R E D N+++ A C+ G + + L+
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI K +A++ + M G P+ SS I HL KM+ E L
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ G ++A L E + K + V NS++ C++G ++ + K+
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG 352
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
+PD T+ I++ K K + +M +K +P + +I L K R +
Sbjct: 353 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 409
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +EA +L + D+ D+ + +++ C+ G E + ++R++ EL
Sbjct: 87 LIEGFCETGRIDEAVELF----GEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELG 142
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + E+ A + +M +KG P C+++I K S+AL
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 202
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 41/73 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C+ G +A ++ + + K +V N+++ +C G + + ++ K+
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Query: 61 ISPDYNTFHILIK 73
++PD T+++LI+
Sbjct: 248 VNPDAVTYNLLIR 260
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 61/112 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + G +++A ++ + + D + NS++ + + G+++ + + +K+ +
Sbjct: 230 VVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEG 289
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ T++ LIK+ KE +M A+ DM ++G P+ ++ ++I LG+
Sbjct: 290 VRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGE 341
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 18/112 (16%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G +EA +L + + + + ++V NS++ +C+ GD H+ + E
Sbjct: 265 IIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQG 324
Query: 61 ISPDYNTFHILI-------------KYF-----RKEKMYMLAYRTMVDMHKK 94
+ PD F +I KYF R K Y Y +VD++ +
Sbjct: 325 LYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQ 376
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ +A+ + G E+ + + EA+ + ++V+LN ++ A+ G I V + E
Sbjct: 405 LANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESG 464
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD T+ L+K F + K + +M G P+
Sbjct: 465 VSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPD 503
>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 458
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G EEAK + K K DVV +S++ YC ++ + + + E
Sbjct: 248 LVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERE 307
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S D +++I+I F K KM A + +M K P+ +LI L K S A+
Sbjct: 308 LSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAM 367
Query: 121 CL 122
L
Sbjct: 368 EL 369
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G E+A+ + + K + V+ ++ A+C+ GD E+++ + R++ E
Sbjct: 192 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 251
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ ++ + + A +V+M G +P+ ++LI
Sbjct: 252 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 298
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFCR G + +L ++ + K K VV N ++ +C+ G M++ ++ + +
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426
Query: 61 ISPDYNTFHILI 72
+SPD T++IL+
Sbjct: 427 VSPDDITYNILL 438
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E +L R+ + + D V N+++ CR D++S ++ ++
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI + KE+ +A +M +G +E ++LI L K ++A
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G A+ + + +++ + VV N+M+ CR GD++ + R++ E
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 181
Query: 61 ISPDYNTFHILIK 73
++PD T+ LI+
Sbjct: 182 VTPDVYTYGALIQ 194
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS CR G + A+ L R DV +++ CR G +E V K+
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK----KGHQPEEELCSSLIFHLGKMR 114
+ P+ F ILI K+ TM+++H+ +G +P+ ++++ L + R
Sbjct: 217 MKPNAVVFTILIDAHCKKG----DAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 270
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ + A ++ ++ A+ D V +++ + G V+ ++ E
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ ++I F ++ R + +M KG +P
Sbjct: 357 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 57/115 (49%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
FC+ G + A + E K + +VV N+M+ A+CR +M+ + ++ E + P+
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T+ ILI F K K A+ + M+ + E + +++I L K+ S+A
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF + G EEA ++ + V+ S++ YC+ ++ + + +++E
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD F +++++F K A + M P L ++I G ++A S
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI--QGCLKAESPEA 433
Query: 121 CLQHVKDIAKDRCAMPFM--RKFFIF 144
L+ D + A FM + F +F
Sbjct: 434 ALEIFNDSFESWIAHGFMCNKIFLLF 459
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ + A ++ + ++ K D+ +++ +C+ DM++ + +L EL
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
+ P+ + ++ LI FR + +D++KK
Sbjct: 691 LMPNVSVYNSLISGFRN----LGKMDAAIDLYKK 720
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+ C+ G +AK++ ++ E +Y NS++ + + GD +S + R++ E
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRY-SMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDM 91
SP+ TF LI F K LA +M
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
>gi|13620171|emb|CAC36392.1| hypothetical protein [Capsella rubella]
Length = 150
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + GG E+A+++ ++ K +V NS++ +C G + ++++++
Sbjct: 41 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSLIRGFCMAGKFKEACSLLKEMESRG 100
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ R + A+ + DM +KGH
Sbjct: 101 CNPNFVVYSTLVNNLRNAGKLLEAHEVVKDMVEKGH 136
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGC-FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++ +C C EAK+ E K DV+ SM+ + + G ++SV+ + +++E
Sbjct: 245 VLNGWCNIVCSVREAKRFWSSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEA 304
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ ++ K + A + M +K P+ +SLI L K R EA
Sbjct: 305 GVAPDRKVYNAIVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEA 364
Query: 120 L 120
+
Sbjct: 365 M 365
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A +G C +EAK L R E K D NS++ C+ + + + + +
Sbjct: 316 IVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEAMEMFDAMLQRK 375
Query: 61 ISPDYNTFHILIKYFRK 77
+SP TFH L+ R
Sbjct: 376 LSPSVRTFHALLNVARN 392
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++AK+L A K D+V +++ + GD+E+V +++
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ IL++ K A+ + M +G P ++LI L +R EAL
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 58/120 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + + G ++A +L + ++ + D++++NS++ + G ++ + +L +L
Sbjct: 513 MMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK 572
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI KE + A M + G P ++L+ L K A AL
Sbjct: 573 LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLAL 632
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 41/166 (24%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG------DMESVIHV-- 52
++S F G E K+ + EA DVV ++ A C++G DM V+ V
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397
Query: 53 -----------------MRKLDE----------LAISPDYNTFHILIKYFRKEKMYMLAY 85
+R+LDE L ++P ++ + I Y+ K A
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457
Query: 86 RTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKD 131
T M K+G P C++ ++ L +M EA KDI D
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREA------KDIFND 497
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
R F +++++ R+ AK K D++ N+++ AYCR M + ++ + I PD
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDV 734
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M+ A + M K G +P + +S++ K+ EA
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + R G +ES +++ ++
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG 414
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ TF+ IK + ++ + +++ G P+ ++L+ G+ SE
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 39/74 (52%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
N+++ AY R G E + V R++ + ++PD +T++ ++ + M+ + + + +M
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 94 KGHQPEEELCSSLI 107
+P E SL+
Sbjct: 553 GRCKPNELTYCSLL 566
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYN 66
RG +EA Q+ + +A +D V N++L Y ++ + + V+ +++ SP
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIV 350
Query: 67 TFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
T++ LI + ++ M A M +KG +P+
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
+ISAF G + EA + + E + K ++ N +L + + G + ++ K+
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 60 AISPDYNTFHILIKYFRKEKMYM------------------LAYRTMVDMHKKGHQPEEE 101
I+PD T++ LI ++ ++ + Y ++D++ K H+P+E
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEA 333
Query: 102 L 102
+
Sbjct: 334 M 334
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+EA ++ + E +V NS++ AY R G ++ + + ++ E PD T+ L
Sbjct: 331 KEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ F + A +M G +P
Sbjct: 391 LSGFERAGKVESAMNIFEEMRNAGCKPN 418
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A CR G +EA D +A+ VV N++L + + G+ + V++++++
Sbjct: 250 VIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDG 309
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + Y A + + M KG P ++++ G + EAL
Sbjct: 310 CQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEAL 369
Query: 121 CL 122
L
Sbjct: 370 AL 371
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ + R G +EEA + +K + N+++ AY G ++ + + ++ +
Sbjct: 320 LAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSG 379
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ NT++ ++ K+ + + + +M + G P ++++ GK
Sbjct: 380 CVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK 431
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S + + G + + ++ + D++ NS++ Y + + ++ +L
Sbjct: 600 MLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQ 659
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +++ +I F K+ + A R + +M G P +L+ + SEA
Sbjct: 660 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEA 718
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR GC + A L ++ E K K VV NS++ C+ G +++ +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P+ TF++L+ F KE A +M +G P
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 61 ISPDYNTFHILIK 73
+P+ T++ LI+
Sbjct: 539 NAPNDCTYNTLIR 551
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I ++ A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK 112
+M KG + +SL+ L K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCK 275
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+IS C+ G FEEA L + E K D N+++ YCR G +E K+ E
Sbjct: 446 IISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEK 505
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T +IL++ +E M + A + KG + +++I L K EA
Sbjct: 506 SFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 565
Query: 120 LCL 122
L
Sbjct: 566 FDL 568
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVIHVMRKLDEL 59
+IS C+ G FEEA L + E K D N++LCA G +E K+ E
Sbjct: 340 IISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEK 399
Query: 60 AISPDYNTFHILIKYFRKEKM 80
+ PD T +IL++ E M
Sbjct: 400 SFKPDLFTCNILLRGLCTEGM 420
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G E+A+ + + K + V+ ++ A+C+ GD E+++ + R++ E
Sbjct: 316 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 375
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ ++ + + A +V+M G +P+ ++LI
Sbjct: 376 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFCR G + +L ++ + K K VV N ++ +C+ G M++ ++ + +
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 61 ISPDYNTFHILI 72
+SPD T++IL+
Sbjct: 551 VSPDDITYNILL 562
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E +L R+ + + D V N+++ CR D++S ++ ++
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI + KE+ +A +M +G +E ++LI L K ++A
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G A+ + + +++ + VV N+M+ CR GD++ + R++ E
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 305
Query: 61 ISPDYNTFHILIK 73
++PD T+ LI+
Sbjct: 306 VTPDVYTYGALIQ 318
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS CR G + A+ L R DV +++ CR G +E V K+
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK----KGHQPEEELCSSLIFHLGKMR 114
+ P+ F ILI K+ TM+++H+ +G +P+ ++++ L + R
Sbjct: 341 MKPNAVVFTILIDAHCKKG----DAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 394
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS+F R G ++A +L + E K DVV NSM+ + GD++ + + + E
Sbjct: 466 MISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKG 525
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ F K +A +M +G P
Sbjct: 526 YDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPN 564
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G ++A +L +D E D V +++ AYC++ +M ++R++ +
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ F M + + M +KG P +SLI MRA +
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623
Query: 118 E 118
E
Sbjct: 624 E 624
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ ++L + K + NS++ YC +M + + R +
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ PD NT++ILIK K + A+ DM KG
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G + +L + + K K + N ++ C+TG + V+R++
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD + LI F K AYR +M K+ P+
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
+ C+ G EA QL E + DV+ ++++ YC+ G+++ V+ ++ ++ + P
Sbjct: 262 SLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKP 321
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ T++ +I K A R + +M +G P+ + ++LI K+ S A
Sbjct: 322 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+++ R+ ++ D V+ +++ +C+ G++ S + ++ +
Sbjct: 329 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 388
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ T+ +I + M A + +M K +P+E ++LI K EA
Sbjct: 389 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 448
Query: 121 CLQH 124
L +
Sbjct: 449 SLHN 452
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ C+ G + A +L + K + ++ NS++ C+ G+++ + +M+ ++
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ L+ + K + + A+ + M + QP
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G FE A+ L + AK +VV N+++ CR M+ ++ +
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREG 173
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P TF++L+ + K A M G+QP ++LI
Sbjct: 174 IRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALI 220
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V ++++ YC+ M+ + + R+++
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + K G Q E + ++ L K + +AL
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDAL 528
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ D + NS++ +C +G + I ++K+
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +PE
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+F R G +EA + + E K D++ NS++ + GD++ +++ E
Sbjct: 483 LISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD T+ L++ F K + +AY +M KG QP
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C G E A+ L + + + DVV ++M+ C+ GD+++ +++ + +
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNF-PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T+ I+I F K A + M G P+ + SLI
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI KE A + M +KG P+ ++LI L + EA+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Query: 121 CL 122
L
Sbjct: 311 WL 312
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C ++A L R + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I P+ + L++ + K + + V+M +KG +P+ + + LI L K+
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A +L + + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD + LI K A+ M M ++G +P
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 42/99 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A Q+ E ++V N ++ R + + +M ++ L
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T+ ILIK F K A + M +G +PE
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C G E A+ L + + + DVV ++M+ C+ GD+++ +++ + +
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNF-PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T+ I+I F K A + M G P+ + SLI
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI KE A + M +KG P+ ++LI L + EA+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Query: 121 CL 122
L
Sbjct: 311 WL 312
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C ++A L R + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I P+ + L++ + K + + V+M +KG +P+ + + LI L K+
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A +L + + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD + LI K A+ M M ++G +P
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 42/99 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A Q+ E ++V N ++ R + + +M ++ L
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T+ ILIK F K A + M +G +PE
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G ++A +L +D E D V +++ AYC++ +M ++R++ +
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ F M + + M +KG P +SLI MRA +
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523
Query: 118 E 118
E
Sbjct: 524 E 524
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ ++L + K + NS++ YC +M + + R +
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ PD NT++ILIK K + A+ DM KG
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+++ R+ ++ D V+ +++ +C+ G++ S + ++ +
Sbjct: 229 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 288
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ T+ +I + M A + +M K +P+E ++LI K EA
Sbjct: 289 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 348
Query: 121 CLQH 124
L +
Sbjct: 349 SLHN 352
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ C+ G + A +L + K + ++ NS++ C+ G+++ + +M+ ++
Sbjct: 369 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ L+ + K + + A+ + M + QP
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR GC + A L ++ E K K VV NS++ C+ G +++ +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P+ TF++L+ F KE A +M +G P
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 61 ISPDYNTFHILIK 73
+P+ T++ LI+
Sbjct: 539 NAPNDCTYNTLIR 551
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G +A L + D+V NS++ CR+GD ++RK++E
Sbjct: 164 LINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ D T+ +I ++ A +M KG + +SL+ L K
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A+++ R K DV+ N ++ Y G ++ + + +
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
I PD +++ILI + ++K A + ++ +KG +P C+ L +F LG+ ++
Sbjct: 349 IEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408
Query: 118 ----EALCLQHVKDI 128
E L H+ D+
Sbjct: 409 NFFDEMLSAGHIPDL 423
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G + A L + + K D+ ++++ A C+ E+V + ++ L
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN 278
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ TF+ +I KE A M M +KG P+
Sbjct: 279 IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPD 317
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR GC + A L ++ E K K VV NS++ C+ G +++ +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P+ TF++L+ F KE A +M +G P
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 61 ISPDYNTFHILIK 73
+P+ T++ LI+
Sbjct: 539 NAPNDCTYNTLIR 551
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I ++ A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK 112
+M KG + +SL+ L K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCK 275
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +A +L + K VV LNS++ YC G + ++R++
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD TF+IL+ KE A + M K+G P+ SSL+
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 323
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + D++ NS++ A C+ ++ I +++K+ +
Sbjct: 377 LIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQG 436
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I D T++ILI K+ A D+ KG+
Sbjct: 437 IQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYN 473
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A C G EEA L K K V+ S++ YC+ GD++S +M K+
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +T++ LI K K A + M K+G +P + LI + + H++A
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADA 530
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G ++ + K +V+ N+++ YC+ GDM++ + V++ +
Sbjct: 272 VVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNR 331
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P TF+ +I F A + M G P +SLI G+ +
Sbjct: 332 VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLIS--GQCSVGERKI 389
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
L+ + D+ ++ +P + + IF
Sbjct: 390 ALR-LLDLMEEYGVLPDRQTYAIF 412
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G + A L ++ DV N+++ C+ ++ I ++ K+ +
Sbjct: 447 LVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG 506
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEE 101
I P TF+ILIK +K + A + M G +P+++
Sbjct: 507 IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQ 547
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC GG +A + V NS++ C G+ + + ++ ++E
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ I I E A+ + KG + + +SL+
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLV 448
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 20/127 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ AK+ + + + K ++V NS++ C G +E I + K+ L
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338
Query: 61 ISPDYNTFHILIKYFRKEKMY------------------MLAYRTMVDMHKKGHQPEE-- 100
+ P+ T++ LI F K+KM ++ + TM+D + K EE
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398
Query: 101 ELCSSLI 107
LCSS++
Sbjct: 399 SLCSSML 405
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVIHVMRKLDE 58
I+ CR G +A+ D +A +VV N+++ YC+ G M M+++
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ TF+ LI F K++ A + +M K+G +P +SLI
Sbjct: 267 NKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ +EA ++ D + +V+ N+M+ AYC+ G ME + + +
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P+ +T++ LI +++ A + +M KG
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR + AK+L + E K K DVV N ++ C+ + ++ ++ L
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P++ T++ L+ + E A M K+ QP
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQP 516
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A+C+ G EE L + +V N ++ CR D+++ ++ +++
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T++ILI K A + + +M G +P ++L+
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G EEA L K ++V N+++ +C+ M+ V + +
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ TF+ +I + KE M + M +G P + LI
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLI 420
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ A++L + K + V N+++ YC G +++ ++V ++++
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T+++LIK + K A + +M +KG P
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EA QL + DVVL N+++ AYC+ G ++ ++ ++ +
Sbjct: 332 LMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIG 391
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I PD T IL++ + +E + A +V++ K G ++ LI L
Sbjct: 392 IHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISL 441
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +A +L R+ Y V + N ++ CR + V+ K+ E +
Sbjct: 60 VVDGLCGAGMANQALELVRELSGVYTP-TVFIYNGIITGLCRASRVMDAYKVLEKMVEES 118
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ + LA +M + G +P +LI HL + EAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ A C+ G + A++ + DVV + ++ + R G ++ + ++ + +
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKM 113
PD T+ LI KE+ + A+R + M G P +S++ L GKM
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKM 385
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ F++A +L EA +VV NS++ C++G M+ V V + +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T+ I++ K M A + + P+ S +I L + EA
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEAC 459
Query: 121 CLQH 124
+ H
Sbjct: 460 GMYH 463
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + GG E+A+++ ++ K +V NSM+ +C G + ++++++
Sbjct: 445 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 504
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ + + A+ + DM +KGH
Sbjct: 505 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 540
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G EA++ D + V ++ AYCR G++ S RK+ E
Sbjct: 553 LIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEG 612
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+++LI + LAYR +M ++G P + + LI
Sbjct: 613 VEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLI 659
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G +EA L D V+ N ++ YCR GD+E + ++ E
Sbjct: 378 LLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ IL+K + +M KG +P+
Sbjct: 438 CLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPD 476
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + G E A+ + A DV+ NS+L YC+ G+ + + + L
Sbjct: 343 MIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAG 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++P T++ILI + + A R +M ++G P+
Sbjct: 403 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 441
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EEA+QL + + + K D + N+++ Y + GDM+ V ++
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T++ LI+ K + A + +M KG P++ S+I
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G + A QL ++ + D + N+++ YCR G +E ++ ++
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR--AHSE 118
I PD+ +++ LI + K A+R +M G P ++LI L K + H+E
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586
Query: 119 ALCLQHV-KDIAKD 131
L + V K I D
Sbjct: 587 ELLKEMVSKGITPD 600
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 48/79 (60%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+++ N+++ +C G+++ +++++D + + PD T++ L++ + +E A + +
Sbjct: 460 DIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLL 519
Query: 89 VDMHKKGHQPEEELCSSLI 107
+M ++G +P+ ++LI
Sbjct: 520 DEMKRRGIKPDHISYNTLI 538
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G ++A + +K +V N + A G M ++++++ E
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T +ILI + + A+ + +M KG QP +SLI+ LGK EA
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446
Query: 121 CL 122
L
Sbjct: 447 AL 448
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ G ++AK+ E K +VV N+++ +C G + + + + +
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ I KE A + M + G P ++LI
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 9 GCFE-----EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
GCFE E +L + E + K + V N M+ + + G M+ V +RK++E P
Sbjct: 346 GCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLP 405
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQ 123
D T++ LI + K A+R M +M +KG + ++ ++++ ALC +
Sbjct: 406 DIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTML----------RALCRE 455
Query: 124 HVKDIAKDRCAMPFMRKFFI 143
D A D R +F+
Sbjct: 456 RKLDEAHDLLCSARRRGYFV 475
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS FC+ G EA +L + E DVV N+++ G E ++ +++
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI-FH--LGKM 113
+ P+ T+++++K+F K+ +T+ M + G P+ ++LI +H +GKM
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E+A Q K K DVV N++LC C+ G +E + +
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKG 612
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
D +++ +I KEK + A+ + +M +K P+
Sbjct: 613 KDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPD 651
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ F + G +E + R E D+V N+++ +C+ G M+ +M ++
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + +++ +E+ A+ + ++G+ +E +LI K S+AL
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497
Query: 121 CL 122
L
Sbjct: 498 RL 499
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 12 EEAKQLARDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
E+A Q R ++ +K ++ NSM+ C+ G I + +L E + PD T+
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
+ +I + +E A++ M +K +P+ C++L+ L K +AL L
Sbjct: 551 NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EA+ L D + K + N ++ CR G ++ +V+ + + +
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++++I F K+ A R +M P+ ++LI
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVM---RKLD 57
+IS C+ G +EA +L + K K D V LN+ML A CR ++ ++ R+
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
Y T ++I YF+ EK A R +M +K P +S+I L +M +
Sbjct: 473 YFVDEVSYGT--LIIGYFKHEKASQ-ALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529
Query: 118 EAL 120
+A+
Sbjct: 530 QAI 532
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EA QL + DVVL N+++ AYC+ G ++ ++ ++ +
Sbjct: 336 LMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIG 395
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I PD T IL++ + +E + A +V++ K G ++ LI L
Sbjct: 396 IHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISL 445
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G E A++L + +++ K D + N+++ Y + GDM+ V ++ +
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+P T++ LI+ K + A + + +M KG P + SLI +G +
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G ++A L K D+++ N+++ +C G+M+ +++++D++
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF+ L++ +E A + +M +G +P+ ++LI
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLI 513
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G + A + ++ + D V N+++ CR G +E+ ++ ++
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA--HSE 118
I PD+ +++ LI + K A+R +M G P ++LI L K H+E
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 119 AL 120
L
Sbjct: 562 QL 563
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ G ++AK+ EA K +VV N+++ YC G +E + +
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ I KE A + M + G +P ++LI
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 35/146 (23%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDME-------------- 47
IS C+ G EEA + + + V N+++ YC G++E
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327
Query: 48 --------SVIH-------------VMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+IH +++++ E + PD T++ILI + + A+
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFT 387
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGK 112
+M KG QP +SLI+ L K
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSK 413
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E
Sbjct: 418 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 477
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T+ L+ F K K A + +M G P + S ++
Sbjct: 478 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 524
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +EA QL R+ D V +++ YCR GD+E + + +++ +
Sbjct: 348 LIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMG 407
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T++ +++ ++ + +M ++ Q + C++LI
Sbjct: 408 MLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLI 454
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +CR G EA + E + K DVV NS++ C+ ++ ++R++
Sbjct: 313 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAG 372
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMR 114
++PD+ T+ L+ + + A + +M G P ++++ L GKM+
Sbjct: 373 VAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMK 429
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E A ++ + + D V +++ +CR G + +R++ E
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ ++I + K+ + ++ + +M GH+P
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +A++L + + K D + +++ YC+ GD+ES + + + ++E
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D F LI F ++ A RT+ +M + G +P++ + +I
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 59/124 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +AK + + + + V N+++ C++ +++ + + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +LI KE +A + +M ++G +P ++LI + R A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348
Query: 121 CLQH 124
H
Sbjct: 349 NTYH 352
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 39/73 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G + +L ++ + K V+ N ++ C+ G M++ ++ + L
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 61 ISPDYNTFHILIK 73
++PD T++IL++
Sbjct: 534 VTPDDITYNILLE 546
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E A ++ + + D V +++ +CR G + +R++ E
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ ++I + K+ + ++ + +M GH+P
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +A++L + K D + +++ YC+ GD+ES + + + ++E
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D F LI F ++ A RT+ +M + G +P++ + +I
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +AK + + + + V N+++ C++ +++ + + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ +LI KE +A + +M ++G +P ++LI
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 39/73 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G + +L ++ + K V+ N ++ C+ G M++ ++ + L
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 61 ISPDYNTFHILIK 73
++PD T++IL++
Sbjct: 534 VTPDDITYNILLE 546
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+ + G E+A L D+V N+++ A R G ++ I L L
Sbjct: 833 LLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLG 892
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T+ +I F K A + D+ G QP+E++ S ++
Sbjct: 893 LRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMM 939
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S + E+AK L + ++ + D V +M+ YC + + V+R++ E
Sbjct: 596 MLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKG 655
Query: 61 ISPDYNTFHILIKYF 75
+PD+ T ILI +
Sbjct: 656 FTPDHITQGILINAY 670
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA C GC +E +L R + + D+V N++L C + V +M ++ +
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATII 290
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A CRGG F A + + AK D N ++ A C G ++ + ++RKL
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD +++ ++K K + MV+M + G P ++LI +L
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYL 258
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 55/125 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +EA L ++ A K + + +L CR ++ + +
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + K+ + A + M G P+ S++I LGK EAL
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513
Query: 121 CLQHV 125
L +V
Sbjct: 514 ELLNV 518
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C +EEA+ L + + D V N ++ +C+ G ++ VI ++ ++ E
Sbjct: 324 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 383
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ +I F KE + A + +M G +P
Sbjct: 384 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EAK + K K DVV NS++ YC + + + +
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I F K KM A + +MH K P +SL+ L K S AL
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCAL 393
Query: 121 CL 122
L
Sbjct: 394 EL 395
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G A +L + + +++ NS+L A C+ ++ I ++ K+ E
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ +LI K A + D+ KG+ P +SLI
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ +A L + +K DVV +S++ +C G ++ + + ++
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
I+P+ TF ILI F KE A + M KK
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKK 297
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A A+ + D V +++ CR G+ ++ + ++R++D
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ + +I K+K+ A+ +M K P+ SSLI
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLI 240
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +GG + EA + R+F+ K DVVL ++++ A C+ G +ES + ++ ++ +
Sbjct: 364 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 423
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ +I F
Sbjct: 424 IRPNVVTYNSIIDAF 438
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G FEEA + R+ E + DVV N++L Y + + V V ++
Sbjct: 294 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARH 353
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+SP+ T+ LI + K +Y A + K G + + L S+LI L K
Sbjct: 354 VSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCK 405
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG + A ++ + AK +VV ++M+ Y + G ++ ++ ++ L
Sbjct: 224 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG 283
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS D +++ L+ + K + A +M G + + ++L+ GK
Sbjct: 284 ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGK 335
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +GG +E A+ L+ + + D+ N++L A C+ G ++ +M ++
Sbjct: 189 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKN 248
Query: 61 ISPDYNTFHILIKYFRK 77
I P+ T+ +I + K
Sbjct: 249 ILPNVVTYSTMIDGYAK 265
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ C E AK+L + + + D+ +++ + G+++ + ++ ++ ELA
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + + L+ F + A + +M +KG PEE LC L+ K EA+
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764
Query: 121 CLQH 124
L++
Sbjct: 765 ELKN 768
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G EE L + + D++ N ++ YC+ M ++
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 389
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ LI F KE M A + VDM + G P E +SLI
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G E +++L DVV NS++ Y + G +E V + ++ ++
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ LI Y + EKM A+ +M G +P S+LI
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPR-AFEYFSEMKNNGLKPNVVTYSTLI 401
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EA +L D K ++V ++L C+ G M V R + +
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF-HLGKMRAHSEA 119
ISP+ + L+ + K + A + + M + +P+ L S+I+ H + +
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554
Query: 120 LCLQHVKD 127
L L+ +K
Sbjct: 555 LILEEMKS 562
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E A + + K D LNS++ A RTG E + ++ +
Sbjct: 160 VIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSG 219
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ + +F+ ++ K LAY+ M +M +G +P ++LI LG+ + SEA
Sbjct: 220 VAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEA 278
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+Y V++ N+++ AY R+ + V+ ++LD+ P+ T+ +I+ K +LA
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMD 70
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ M K G +P+ L + ++ LGK EA
Sbjct: 71 FLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEA 103
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G E A +L R E D N+++ A C+ G + + L+
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI K +A++ + M G P+ SS I HL KM+ E L
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ G ++A L E + K + V NS++ C++G + + K+
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
+PD T+ I++ K K + +M +K +P + +I L K R +
Sbjct: 317 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 373
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 41/73 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C+ G +A ++ + + K +V N+++ +C G + + ++ K+
Sbjct: 152 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 211
Query: 61 ISPDYNTFHILIK 73
++PD T+++LI+
Sbjct: 212 VNPDAVTYNLLIR 224
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E A + + K D LNS++ A RTG E + ++ +
Sbjct: 160 VIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSG 219
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ + +F+ ++ K LAY+ M +M +G +P ++LI LG+ + SEA
Sbjct: 220 VAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEA 278
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+Y V++ N+++ AY R+ + V+ ++LD+ P+ T+ +I+ K +LA
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAME 70
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ M K G +P+ LC+ ++ LGK EA
Sbjct: 71 LLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEA 103
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ AFC+ G ++A ++ R+ + D + N+++ +CR D + + +++++E
Sbjct: 201 LTRAFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDCDGALEFLKEMNERK 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM----RAH 116
++PD T++ILI K A + +M +G P+ +S++ L K RAH
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316
Query: 117 S 117
S
Sbjct: 317 S 317
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ C+ G +EA +L ++ K ++V N+++ C+ E ++ L
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ I++ KE A + + M K+G P
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +EA + DVV N ++ + + V+ ++ +
Sbjct: 579 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 638
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ F KE+ + A + +M K G P+ ++LI L + +A
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 121 CLQH 124
L H
Sbjct: 699 ELMH 702
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ + AK L +F + DVV + + C+ G ++ +++++
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+P+ T++ LI K AY + + G P+
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G +EA +L + E K + +VV +M+ + R G +E+ + ++ ++
Sbjct: 751 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKG 810
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+Y T+ +LI + K +A+ + +M K+ H P
Sbjct: 811 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 847
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G + E+ + D + +S++C+Y + G + + E
Sbjct: 546 LISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETG 605
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T+ LIK + + + A+ +M G QP+ +CSSL+ L K
Sbjct: 606 CFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNK 657
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 512 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 571
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + K GH + L + ++
Sbjct: 572 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ + K A DM KG +P L S ++ L + R + A
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A L + + +++ NS++ C+ +M+ +++K+ +
Sbjct: 54 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T+ ++I K K A R + M + G +P +SLI
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLI 160
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVIHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 195 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 254
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314
Query: 120 L-CLQHVKDIA 129
L H+ DI
Sbjct: 315 LHKFNHMVDIG 325
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA +L + + + D+VL N ++ G +E + KL
Sbjct: 337 LLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANG 396
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++I+IK KE + AY+ M G P+ CS + G ++ +
Sbjct: 397 IRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDS--CSYNVIIQGFLQNQDPST 454
Query: 121 CLQHVKDIAKDR 132
+Q + ++ R
Sbjct: 455 AIQLIDEMVGRR 466
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
CR A + + K D +DV N++ + R G + V VMR+++ + PD
Sbjct: 190 LCRRSHVGAANSVLNSMKGKVD-FDVGTYNAVAGGWSRFGRVSEVERVMREMEADGLRPD 248
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQH 124
TF LI+ +E A + M + QP+ E +++IF+ + E C+++
Sbjct: 249 CRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEE--CIKY 306
Query: 125 VKDIAKDRC 133
+ D C
Sbjct: 307 YNRMLSDNC 315
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G E+A Q Y K DVV N+++ C G +E I + E
Sbjct: 567 IIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI+ K+ A DM +G QP+ + ++ L + EA
Sbjct: 627 KKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQ 686
Query: 121 CLQHVKDIA---KDRCAMPFMR 139
+ H D + +R + P ++
Sbjct: 687 NMLHKLDESGKLSERFSYPLIK 708
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
CF+ +A L + K K +V N ++ CR G +E + ++ + E ++P
Sbjct: 360 ACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAP 419
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI + K + A+ M +M + G + + ++L+++L K + + EA
Sbjct: 420 DVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA + + DV+ N+++ AYC+ ++ +M ++
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ D T + L+ KEK Y A + ++G P+E
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDE 491
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G EEA + +K + +++ NS++ YCR+G+++ ++K+ +
Sbjct: 478 LIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD TF+ LI + KE+ A+ M K+ QP+
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPD 576
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G FE+A QL + + DVV NS++ CR GD+ + +
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ T+ ILI ++ A+ + +M KG+ P +S+I
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G ++ +Q + D++ N+++ Y + +M +V +++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++++I F ++ A R M G +P+ SLI
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G + A L K K +V NS+L C+ + V R +D+ +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD +F+ILI F + A + +M ++G P+ S LI
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ F++AK++ R + DV N ++ +CR G++E + +++ +
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F A + +M G P+ + + +I + + SEAL
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EEA + ++ + + DVV + ++ + G M+ +R++ L
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I F + A R +M G P+ ++L+ L
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL----------NGL 377
Query: 121 CLQH 124
C QH
Sbjct: 378 CKQH 381
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EA ++ + DVV N++L C+ + ++ ++ E
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397
Query: 61 ISPDYNTFHILI 72
++PD TF LI
Sbjct: 398 VTPDLCTFTTLI 409
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F G + A R+ + D V+ ++ +CR G M + V ++ L
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCS 104
PD T++ L+ K+ + A + +M ++G P +LC+
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP--DLCT 404
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R +A+++ E K + D+V N+M+ YC+ G M I M + ++
Sbjct: 490 LIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 549
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM K+ +P SSLI
Sbjct: 550 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 596
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 385 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K+ M A + +M +K QP+E + ++LI
Sbjct: 445 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLI 491
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + + G A + D + K +VV +S++ YC+TGD +S + + A
Sbjct: 560 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 619
Query: 61 ISPDYNTFHILI-KYFRKEKMYM--LAYRTMVDMH 92
+SP+ T+ ILI F+K+K+ L + TM+ H
Sbjct: 620 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 654
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +A + + A D++ N+++ C G + H +R+
Sbjct: 315 VIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 374
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI F M A +++M +GH P+ +LI L SEAL
Sbjct: 375 LNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 434
Query: 121 CLQH 124
++
Sbjct: 435 IVRE 438
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
++ C G EE +L EA++ VV N ++ YCR GDM + ++ +++
Sbjct: 210 LVRGLCLEGRVEEGLKL---IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 266
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
P T+ LI K+ ++M K+G P ++ +S+I L K + +
Sbjct: 267 AKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSAT 326
Query: 118 EALCL 122
+A+ +
Sbjct: 327 QAMVI 331
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+V LN ++CA+C+ G +E I V ++++ + SP +++ LI + + + +
Sbjct: 313 NVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 372
Query: 89 VDMHKKGHQPEEELCSSLI 107
+ M K G +P++ ++LI
Sbjct: 373 ILMEKNGVRPDDVTFNTLI 391
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
AFC+ G E+A ++ + E + N+++ YC G + S + + +++ + P
Sbjct: 323 AFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRP 382
Query: 64 DYNTFHILIKYF 75
D TF+ LI F
Sbjct: 383 DDVTFNTLINGF 394
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
EAK+ E K K DVV SM+ + + G +++V+ + ++ E + PD ++ ++
Sbjct: 267 EAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVV 326
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
K + A + M +KG P+ +SLI L K R EA
Sbjct: 327 YALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEA 373
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A +G C EAK L R E K D NS++ C+ ++ ++ +
Sbjct: 325 VVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 384
Query: 61 ISPDYNTFHILIKYFR 76
+SP TFH L+ R
Sbjct: 385 LSPSVRTFHALLDVAR 400
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS F + G + +L + D + N+++ A + + ++R ++E
Sbjct: 290 MISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKG 349
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD TF+ LI+ K + A + + DM +G P
Sbjct: 350 VAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSP 387
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +EA ++A++ +AK+ VV NS++ + + ++ I V ++
Sbjct: 223 VIEELSKTGRVDEAVEIAKEADAKHCT-SVVTYNSLVLGFLKARRLKRGIKVFTRMARTG 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
SPD T++IL + + ++ AY+ + M++ G P+ +SLI L
Sbjct: 282 PSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGL 331
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 674 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 733
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + K GH + L + ++
Sbjct: 734 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ + K A DM KG +P L S ++ L + R + A
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A L + + +++ NS++ C+ +M+ +++K+ +
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T+ ++I K K A R + M + G +P +SLI
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLI 322
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVIHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 416
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476
Query: 120 L-CLQHVKDIA 129
L H+ DI
Sbjct: 477 LHKFNHMVDIG 487
>gi|125584236|gb|EAZ25167.1| hypothetical protein OsJ_08968 [Oryza sativa Japonica Group]
Length = 566
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E
Sbjct: 297 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T+ L+ F K K A + +M G P + S ++
Sbjct: 357 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 403
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G EEAK A F + DV NS+ A C GD++ + ++
Sbjct: 263 LVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRG 322
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD +T+ +++ K A+R + GH+P L ++++ L K
Sbjct: 323 LCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCK 374
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EA QL + D+V N+++ YC+ G M+ ++ +
Sbjct: 334 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
ISPD T +L++ + KE ++ A +V++ + G +++ S LI L
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVAL 443
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+++CR G ++A L + + D+V +++ C+ G + + ++
Sbjct: 299 LINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI + KE + + DM G P+ C L+ GK AL
Sbjct: 359 LSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSAL 418
Query: 121 CL 122
L
Sbjct: 419 NL 420
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 52/124 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ C+ G + + E + D+V N+++ +YCR G ++ ++ + +
Sbjct: 264 LTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRG 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+ KE A++ M +G P+ ++LI K E+
Sbjct: 324 VVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESR 383
Query: 121 CLQH 124
L H
Sbjct: 384 SLLH 387
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G E+ ++L K K DVV +S + AY + GD+ VI + +++
Sbjct: 348 LIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG 407
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ + ILIK F + + A V + K G +P S+LI K +
Sbjct: 408 ISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGF 467
Query: 121 CLQHVKDIAKDRC 133
L +D+ K RC
Sbjct: 468 YLY--EDMIKKRC 478
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ R G E A L + K DV N+M+C YC ++ + + K+
Sbjct: 628 LINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ TF ILI F +E A M ++G +P S LI
Sbjct: 688 LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLI 734
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +A + + +V LN++L ++CR + + V + L
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547
Query: 61 ISPDYNTFHILIK----YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
I D T+ ILIK + R ++ ML ++ M KK +P+ +LI L K++
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQ----MLKKDFKPDVITYCTLIDGLCKLKKS 603
Query: 117 SEALCL 122
S LC+
Sbjct: 604 SAGLCI 609
>gi|15232242|ref|NP_191563.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|7076757|emb|CAB75919.1| putative protein [Arabidopsis thaliana]
gi|332646484|gb|AEE80005.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
Length = 838
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G ++AK++ R+ K +V NSM+ C G+ ++++++
Sbjct: 730 LIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 789
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ Y RK A + + +M KKGH
Sbjct: 790 CNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH 825
>gi|297790927|ref|XP_002863348.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309183|gb|EFH39607.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE- 58
MI+ +C G +EA +LA++ +K+D + V + +L C++GDME+ + ++ ++++
Sbjct: 206 MINGYCNAGKIDEAWKLAKEM-SKHDCVLNTVTYSRILEGVCKSGDMETALELLAEMEKE 264
Query: 59 ---LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
ISP+ T+ ++I+ F ++K A + M +G P S LI
Sbjct: 265 DGGGLISPNAVTYTLVIQSFCEKKRIREALLVLDRMGDRGCTPNRVTASVLI 316
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 675 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 734
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + K GH + L + ++
Sbjct: 735 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 781
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 535 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ + K A DM KG +P L S ++ L + R + A
Sbjct: 595 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A L + + +++ NS++ C+ +M+ +++K+ +
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T+ ++I K K A R + M + G +P +SLI
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLI 322
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + GG E+A+++ ++ K +V NSM+ +C G + ++++++
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ + + A+ + DM +KGH
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EA+ ++F + + NS++ + + G+++S + V R++ E
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 639
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SP+ T+ LI F K LA +T +M +KG + + S+LI K R A
Sbjct: 640 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 698
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S C+GG +EA L + + +VV N M+ +CR G+M+ V +
Sbjct: 475 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 534
Query: 61 ISPDYNTFHILI 72
+ P+ T+ ILI
Sbjct: 535 LKPNVVTYSILI 546
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ + A + + K + DV ++++ +C+ DMES + +L E+
Sbjct: 650 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 709
Query: 61 ISPDYNTFHILIKYFR---KEKMYMLAYRTMVD 90
+SP+ ++ +I FR + ++ Y+ M++
Sbjct: 710 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 742
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 38/72 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G E A+++ + + K V++ N+++ Y R G+++ + ++ +
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849
Query: 61 ISPDYNTFHILI 72
+ PD T+ ILI
Sbjct: 850 LVPDDVTYDILI 861
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G F +A +L D A+ + DV +++ C+ G+ + +++K++E
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG 233
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ +I RK++ A M KG P+ +SLI L EA
Sbjct: 234 CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEAS 293
Query: 121 CL 122
L
Sbjct: 294 AL 295
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G F +A +L R ++ Y K ++V+ N ++ A C++G++ + +L
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ P+ + +I KE + A +M + G P+E
Sbjct: 514 LQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+ L ++ + ++ + +L +C+ G + R +
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ILI K A + ++ KG QP ++ +++I L K EA
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA- 537
Query: 121 CLQHVKDIAKDRC 133
L+ +++ +D C
Sbjct: 538 -LEAFRNMEEDGC 549
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++EA L + + D+V N ++ C+ G + V++ + E+
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T+ L+ + + A + M KG +P+
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ NS++ C + ++ ++ L I PD TF++L+ KE A +
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331
Query: 89 VDMHKKGHQPEEELCSSLIF 108
M + G +P+ SSL++
Sbjct: 332 KTMTEMGVEPDVVTYSSLMY 351
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 598 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 657
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + K GH + L + ++
Sbjct: 658 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 704
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ + K A DM KG +P L S ++ L + R + A
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A L + + +++ NS++ C+ +M+ +++K+ +
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T+ ++I K K A R + M + G +P +SLI
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLI 246
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVIHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 340
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400
Query: 120 L-CLQHVKDIA 129
L H+ DI
Sbjct: 401 LHKFNHMVDIG 411
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ G EE +++ ++ E + D N+++ YCR G M + R +
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ T++ L+K F A R M K+G P E CS+L+ L K +AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 121 CL 122
L
Sbjct: 485 NL 486
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 52/109 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M A+CR G +A + + E + ++V ++++ YC G E ++ L
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+SP+ T+ +L+K + K+ A R + +M + G +E+ ++ +
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMIN 332
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I G +EA L + +++ NS++ C++G + +++ KL
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
ISP+ T++ LI + KE A++ M ++G+ E
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEE 839
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EA++L + D + ++ YC+ G + + H+M K++ L
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P F+ I K + +M +G P +LI
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVIHVMRKLD 57
+++A C GC +EA L R + D+V N++L C R GD+E ++ M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +EA L + + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + K+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 CLQHV 125
L +V
Sbjct: 517 ELLNV 521
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 654 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 713
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + K GH + L + ++
Sbjct: 714 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 760
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ + K A DM KG +P L S ++ L + R + A
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I K K A R +
Sbjct: 225 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 284
Query: 90 DMHKKGHQPEEELCSSLI 107
M + G +P +SLI
Sbjct: 285 QMVEAGTRPNSITYNSLI 302
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVIHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456
Query: 120 L-CLQHVKDIA 129
L H+ DI
Sbjct: 457 LHKFNHMVDIG 467
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ G EE +++ ++ E + D N+++ YCR G M + R +
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ T++ L+K F A R M K+G P E CS+L+ L K +AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 121 CL 122
L
Sbjct: 485 NL 486
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I G +EA L + +++ NS++ C++G + +++ KL
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
ISP+ T++ LI + KE A++ M ++G QP S LI+ L
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGL 850
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 52/109 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M A+CR G +A + + E + ++V ++++ YC G E ++ L
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+SP+ T+ +L+K + K+ A R + +M + G +E+ ++ +
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMIN 332
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EA++L + D + ++ YC+ G + + H+M K++ L
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P F+ I K + +M +G P +LI
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EA QL + D+V N+++ YC+ G M+ ++ +
Sbjct: 379 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
ISPD T +L++ + KE ++ A +V++ + G +++ S LI L
Sbjct: 439 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVAL 488
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+++CR G ++A L + + D+V +++ C+ G + + ++
Sbjct: 344 LINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRG 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI + KE + + DM G P+ C L+ GK AL
Sbjct: 404 LSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSAL 463
Query: 121 CL 122
L
Sbjct: 464 NL 465
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 52/124 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ C+ G + + E + D+V N+++ +YCR G ++ ++ + +
Sbjct: 309 LTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+ KE A++ M +G P+ ++LI K E+
Sbjct: 369 VVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESR 428
Query: 121 CLQH 124
L H
Sbjct: 429 SLLH 432
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I ++C+ G E+A + E+K +V N ++C +CR M+ + ++ K+ E
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SPD T++ LI + + A R M + G P++ ++ + L +M EA
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A+C G EEA+++ + + D + N ++ AY G ++S V+R++
Sbjct: 612 IKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGC 671
Query: 62 SPDYNTFHILIKYFRKEK 79
P Y T+ IL+K+ EK
Sbjct: 672 EPSYLTYSILMKHLVIEK 689
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA ++ + K VV N+++ +YC+ G ME + V+ ++
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ P+ T++ LI F + K A + M + P+ ++LI L
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGL 440
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
CR G EA Q+ + K+ K + +++ YC+ G +E + +++ P+
Sbjct: 475 LCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPN 534
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
TF+++I RKE A + DM K +P
Sbjct: 535 SITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP 568
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E A L + A+ + + N M+ + G ++ + ++ + +
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P +T++IL++ KE + A + + G+QP
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +E ++ + + + DVV+ ++ + CR G ++ VM K+ E
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI KE A +M +KG + ++LI L + EA+
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308
Query: 121 CL 122
L
Sbjct: 309 GL 310
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C G E+A+ + K K DVV ++M+ CR D +S ++ + +
Sbjct: 436 LLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +LI F A R + M G P+ + SLI G + L
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVL 554
Query: 121 CL---QHVKDIAKD 131
L KDIA D
Sbjct: 555 ELIREMTAKDIALD 568
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C +A L RD +A + DVV +++ C D++ + ++R++ E
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I P+ + L++ + K + + +M +G +P+ + + LI L GK++ +
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238
Query: 118 EAL 120
+ +
Sbjct: 239 QVM 241
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A +L R+ + +VV+ + +L YC+ G E V V ++
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI +E A + M M ++G +P + LI + K + EA+
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273
Query: 121 CLQH 124
L++
Sbjct: 274 SLRN 277
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EA+ ++F + + NS++ + + G+++S + V R++ E
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 599
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SP+ T+ LI F K LA +T +M +KG + + S+LI K R A
Sbjct: 600 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 658
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S C+GG +EA L + + +VV N M+ +CR G+M+ V +
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 494
Query: 61 ISPDYNTFHILI 72
+ P+ T+ ILI
Sbjct: 495 LKPNVVTYSILI 506
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ + A + + K + DV ++++ +C+ DMES + +L E+
Sbjct: 610 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 669
Query: 61 ISPDYNTFHILIKYFR---KEKMYMLAYRTMVD 90
+SP+ ++ +I FR + ++ Y+ M++
Sbjct: 670 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 702
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 38/72 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G E A+++ + + K V++ N+++ Y R G+++ + ++ +
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809
Query: 61 ISPDYNTFHILI 72
+ PD T+ ILI
Sbjct: 810 LVPDDVTYDILI 821
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + +EEA +L ++ + D V N++L Y + G + +V +++EL
Sbjct: 128 LIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELG 187
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T++ LI + K+ + + DM K+G P S+LI K H +A
Sbjct: 188 IEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAF 247
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ + + G + E + + E + D V NS++ Y + G ++ V +++ + +
Sbjct: 163 LLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRG 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P T+ LI + K M+ A+ +D + G +P+ L SS I L K
Sbjct: 223 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAK 274
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 42/90 (46%)
Query: 33 LNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
NS+L A R G +E V ++ L I D T++ I K LA + ++DM
Sbjct: 55 FNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDME 114
Query: 93 KKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
KG +P S+LI K+ + EAL L
Sbjct: 115 AKGVKPNVVTYSTLIDGYSKLEKYEEALKL 144
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +A + DF+ K DVVL +S + + G +E + ++ + E+
Sbjct: 233 LIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMG 292
Query: 61 ISPDYNTFHILIKYFRKEKMYM 82
I P+ T++ +I F K K+ M
Sbjct: 293 IKPNVVTYNAIIDAFGKSKVMM 314
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 54/113 (47%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYN 66
R F +++++ R+ AK K D++ N+++ AYCR M + ++ I PD
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 67 TFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M+ A + M K G +P + +S++ K+ EA
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 53/118 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + R G +ES + + ++
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ TF+ IK + + + +++ G P+ ++L+ G+ SE
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 33 LNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
N+++ AY R G E + V R++ + ++PD +T++ ++ + M+ + + + +M
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 93 KKGHQPEEELCSSLI 107
+P E SL+
Sbjct: 552 DGRCKPNELTYCSLL 566
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ RG +EA Q+ + +A YD V N++L Y ++ + + V+ ++
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SP T++ LI + ++ M A M +KG +P+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVIHVMRKLDEL 59
+ISAF G + EA + + E K ++ N +L + + G + ++ K+
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 60 AISPDYNTFHILIKYFRKEKMYMLA------------------YRTMVDMHKKGHQPEEE 101
I+PD T++ LI ++ ++ A Y ++D++ K H+P+E
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 102 L 102
+
Sbjct: 334 M 334
>gi|452823354|gb|EME30365.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 683
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 2 ISAFCR-GGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+S FC+ EE+ QL + + + D + N +L R D E + ++L
Sbjct: 382 LSVFCKMKTAIEESFQLLKWAKENGIEPDTISYNILLDHAFRLRDWERGEKIFKELQTQG 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL--IFHL 110
+ PD T++ LI+ + Y T +M+K+ P E+ CSSL +FH+
Sbjct: 442 LKPDATTYNYLIRAYSNSNQYAKVVATFKEMNKRNFIPNEQSCSSLVRVFHI 493
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A CRGG F A ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD +++ ++K K + M +M + P ++LI +L
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C G +EA L RD + + DVV N++L C V +M ++ +A
Sbjct: 198 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 304
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ +CR G E A++LA + Y + LCA R D +V+ M +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 155
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P Y H++++ + + A R + D+H +G
Sbjct: 156 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 187
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 3 SAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
SA R G + Q+ + + + D VL N+++ + C+ G+ E I + +
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 63 PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ +T+ ILI+ E A + ++ KG
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C +EE ++L + K D V N ++ +C+ G ++ VI ++ ++ E
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ +I F KE + A + M G +P
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR G ++A ++ E + D+ N++ C CR ++ ++ + E+
Sbjct: 149 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 208
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+Y T+ LI K+ + A R +M +KG P
Sbjct: 209 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 246
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G E A+ L D + + + ++ N+M+ YCR G ++ + + ++++
Sbjct: 114 LINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMG 173
Query: 61 ISPDYNTFHIL 71
+ D T++ L
Sbjct: 174 VELDIYTYNTL 184
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
CR +EAK L + V +++ +C+ GDM + R++ E +P
Sbjct: 187 GLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 246
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T++++I + K+ A R +M KKG P+ +SL+
Sbjct: 247 SVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLV 290
>gi|361067157|gb|AEW07890.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+G +EA L + ++ K D+ N ++ +Y + G ME V K +
Sbjct: 4 VITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTENDN 63
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I + ++ ILI F ++ A+ ++ K G P ++ S LI
Sbjct: 64 IKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLI 110
>gi|255602749|ref|XP_002537912.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223514585|gb|EEF24471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 58/125 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ E+A++L ++ + DV N M+ + GD++S +++ + ++
Sbjct: 57 LMASLCKESSLEQARKLFQELRNSNCELDVFSFNIMIYGTLKAGDIQSAKELLKDMLQMG 116
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ ILI +F K + A M G P + SL+ M E +
Sbjct: 117 VNPNAFTYFILINWFSKLGLLDEAKEAFNRMIGSGFIPSIHVYDSLLKGFSSMGKAEETI 176
Query: 121 CLQHV 125
L +
Sbjct: 177 NLLQL 181
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G + E+ + D + +S++C+Y + G + + E
Sbjct: 548 LISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESG 607
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +I+ + + + A+ +M QP+ +CSSL+ L + H L
Sbjct: 608 CLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVL 667
Query: 121 CLQHVKDIAKDRCAMPFMRKFF 142
L ++ K++C +P +K +
Sbjct: 668 QLM---ELMKEKC-IPLNQKAY 685
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 53/114 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ G +A + + + + DVV ++L AY R+G E +++ + +
Sbjct: 373 LLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNS 432
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
P+ +++ LI + M+ A + +M K G P+ S+L+ G+ R
Sbjct: 433 CRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCR 486
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVIHVMRKLD 57
+++A C GC +EA L R + D+V N++L C R GD+E ++ M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +EA L + + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + K+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 CLQHV 125
L +V
Sbjct: 517 ELLNV 521
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 47/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A C+ G E+ + + K D+V N+++ AY G ME +M +
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SP T++ +I K Y A +M + G P+ SL+ K
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I F + +A L + E K DV NS+L +CR M+ V+RK+ E
Sbjct: 616 LIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIE 675
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
++PD +T+ LI F + A+R +M ++G P+++
Sbjct: 676 RGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A +L + + K K DVV N++L + + GD+++ + +
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P +F IL+ + A+R +M K +P +C+S+I
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMI 582
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G E A ++ ++ +V LN M+ A C+ G ME V + ++ E
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T++ LI + + + A+ M M KG P
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSP 293
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C G EA ++ + +K K V++ NSM+ YCR+G+ + K+
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
PD +++ LI F KE+ A+ + M +K
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEK 639
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 44/90 (48%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
C+ G E + + D ++ D+V +SM+ + R+G+++ + + E + PD
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ ILI+ + ++ M A +M ++G
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQG 430
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+G EA ++ R K DVV +++ +CR E+ I +M ++ EL
Sbjct: 266 LIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELG 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SP L+ RK+ AY +V + + G P + ++LI L K
Sbjct: 326 FSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCK 377
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ ++A +L +V +++ C T M + +L E
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I P T+++LI+ + ++ A+ + DMH+KG P+ LI L
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C EA +L + + K V N ++ YCR G ++ ++ + +
Sbjct: 511 LISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKG 570
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+ PD T+ LI A + D+HK+ + E+C S + H
Sbjct: 571 LVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKL-NEMCYSALLH 618
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G +AK D + K + + +++L YC+ G + + ++ +
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+ D +LI K+ + + DMH +G +P+ + +S+I
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 47/101 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G F EA ++ + D V ++++ YCR+G++ + + + +
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEE 101
+ PD +++LI A+ DM ++G P+ +
Sbjct: 850 LEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +EAK + + K DVV +S++ YC ++ + +
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + +++I+I F K KM A + +MH K P+ SSLI L K S AL
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + + + D++ NS+L A C+ ++ I ++ KL
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I PD NT+ IL+K + A + D+ KG+
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +A L + +K DV N+++ +C G ++ I + K+
Sbjct: 339 IIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKN 398
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD TF IL+ F K+ A + M K+ +P+ SSL+
Sbjct: 399 IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLM 445
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G E+A+++ D K DV M+ +C G + + ++ K++E
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
Query: 61 ISPDYNTFHILI 72
PD T+ I+I
Sbjct: 644 CIPDAKTYEIII 655
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G A +L R+ +V +++ +C+ G+M+ + K+ E +
Sbjct: 162 LIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESS 221
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI----FHLGKMRA 115
+ P+ TF+++I+ + + A++ M +G P+ SLI LG M+A
Sbjct: 222 LVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKA 280
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G A +L R+ +V +++ +C+ G+M+ + K+ + +
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE----ELCSSLIFHLGKMRA 115
+ P+ TF+++I+ + + A++ M +G P+ L S L LG M+A
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKA 564
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G E + + A+ K D++ ++ A + D E + + R++ E
Sbjct: 586 LMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKG 645
Query: 61 ISPDYNTFHI-LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD N FH +I KE+ + A M G P + LI HL K S A
Sbjct: 646 VKPD-NVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSA 704
Query: 120 LCL 122
L
Sbjct: 705 QIL 707
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 42/100 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ F +A+ L + K + ++ CR GD+ S + + R++
Sbjct: 411 LINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNG 470
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+S + TF LI F K+ A R M P E
Sbjct: 471 VSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNE 510
>gi|383157590|gb|AFG61134.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157592|gb|AFG61135.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157594|gb|AFG61136.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157598|gb|AFG61138.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157600|gb|AFG61139.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157604|gb|AFG61141.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157608|gb|AFG61143.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157610|gb|AFG61144.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157612|gb|AFG61145.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157614|gb|AFG61146.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157618|gb|AFG61148.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157620|gb|AFG61149.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+G +EA L + ++ K D+ N ++ +Y + G ME V K +
Sbjct: 4 VITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTENDN 63
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I + ++ ILI F ++ A+ ++ K G P ++ S LI
Sbjct: 64 IKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLI 110
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E + D
Sbjct: 330 LCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 389
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T+ L+ F K K A + +M G P + S ++
Sbjct: 390 QFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 432
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +EA QL R+ D V +++ YCR GD+E + + +++ +
Sbjct: 256 LIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMG 315
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T++ +++ ++ + +M ++ Q + C++LI
Sbjct: 316 MLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLI 362
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +CR G EA + E + K DVV NS++ C+ ++ ++R++
Sbjct: 221 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAG 280
Query: 61 ISPDYNTFHILIKYF 75
++PD+ T+ L+ +
Sbjct: 281 VAPDHVTYTTLVDGY 295
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EEA+Q K K + V+ SM+ A C++G + ++M+K+
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI-FHLGKMRAHS 117
PD + + LI +E + A + DM + G Q + LI HL + R+ S
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDS 442
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G E A + + ++K +V ++C +C++G +E + + ++ E
Sbjct: 220 LIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAG 279
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P+ T+ LI+ E A+R + M G P E C LI L K
Sbjct: 280 LAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+ K ++ A K DVV + +YC+ G ME +M ++ + + P+ T++ L
Sbjct: 441 DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTL 500
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPEEE 101
IK + + A+ ++ +M G +P +E
Sbjct: 501 IKGYANLGLVSQAFSSLKNMIDNGCKPNDE 530
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C G EA L D K +V + N+++ YC TGD+E I + + +
Sbjct: 185 MVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKG 244
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+ LI F K A M + G P ++LI
Sbjct: 245 CLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLI 291
>gi|255570179|ref|XP_002526050.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534631|gb|EEF36327.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 284
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 58/125 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ E+A++L ++ + DV N M+ + GD++S +++ + ++
Sbjct: 87 LMASLCKESSLEQARKLFQELRNSNCELDVFSFNIMIYGTLKAGDIQSAKELLKDMLQMG 146
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ ILI +F K + A M G P + SL+ M E +
Sbjct: 147 VNPNAFTYFILINWFSKLGLLDEAKEAFNRMIGSGFIPSIHVYDSLLKGFSSMGKAEETI 206
Query: 121 CLQHV 125
L +
Sbjct: 207 NLLQL 211
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EAK+L + + K D ++ C+ GD+ES + + +++ +
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D F LI F +E + A RT+ +M + G +P++ + +I
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A ++ ++ + + D V +++ +CR G + +R++ E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T+ ++I F K+ ++ + +M GH P
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ EA+ L + + + VV N+++ YC++G+++ + R + E
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +LI KE A + ++M +G P + ++LI
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ D + NS+L YC +G + I ++K+
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T+ +L+ Y K M A + M K+G +PE
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G A +L E + K +V N ++ CR G +H+++++ +
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD ++++LI +E +AY+ + M+ +P+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++A L + A+ K +V ++ CR G +E V RK+ +
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P T++ LI + K+ + A+ + M K+ +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS+F R G ++A +L + + K DV+ NSM+ + GD++ + + + E
Sbjct: 223 MISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ F K +A +M +G P
Sbjct: 283 YDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPN 321
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV N M+ ++ R G ++ + ++D+ + PD T++ +I K A+
Sbjct: 216 DVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLF 275
Query: 89 VDMHKKGHQPEEELCSSLIFHLGK 112
DM +KG+ P+ S LI GK
Sbjct: 276 KDMQEKGYDPDVFTYSILIECFGK 299
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS++ R G ++A +L EA K DVV NS++ + GD++ + +++ E
Sbjct: 469 MISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKG 528
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ F K +A +M +G P
Sbjct: 529 YDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 567
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 41 CRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M KKG P
Sbjct: 1066 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1125
Query: 101 ELCSSLIFHLGKMRAHSEA 119
+SLI HLGK +EA
Sbjct: 1126 YTYNSLILHLGKAGKAAEA 1144
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 38/64 (59%)
Query: 36 MLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + K + AYR + M +G
Sbjct: 326 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 385
Query: 96 HQPE 99
+P+
Sbjct: 386 CKPD 389
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ EA +L + F++ L NS++C ++ + ++ EL
Sbjct: 851 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++L+ K + +MH+KG++ +++I L K R +A+
Sbjct: 911 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 970
Query: 121 CLQH 124
L +
Sbjct: 971 DLYY 974
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 564 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 623
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
DM + P+ +SLI L K EA
Sbjct: 624 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 654
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ D + NS+L YC +G + I ++K+
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T+ +L+ Y K M A + M K+G +PE
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A + G EEA+ L + +A DVV + ++ + R G E+ + V+ ++
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ K + A R + +M G P+ + LI LGK SEA
Sbjct: 75 CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134
Query: 121 CL 122
L
Sbjct: 135 TL 136
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++ R G +E A ++ + +AK K ++ N+++ + G + + ++ ++ +
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI K A+ +M ++G P+ +SLI+ LGK+ +A+
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169
Query: 121 CL 122
L
Sbjct: 170 EL 171
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + G EA L + + K DVV + ++ + ++ V++K+++
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI K + A R M KG P+ S+LI LGK A E+
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKA-ARVESA 378
Query: 121 CL 122
C+
Sbjct: 379 CV 380
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G EA L + + D NS++ + G + + ++ +++
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K+ + A++ +M ++G +P+ ++L+ LGK +AL
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239
Query: 121 CLQHVKDIAKDRCAMP 136
+ D K+R P
Sbjct: 240 ---ELLDEMKERGVKP 252
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G ++A +L + + + K VV N+++ + + GD+ +++ ++
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T+ LI K A + + M K+G P+ ++LI LGK
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGK 336
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 42/94 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+VV NS+L A + G E + +L +PD ++ LI + + A +
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
+M KG +P ++L+ LGK EAL L
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRL 101
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G +A +L ++K DVV ++++ A + +ES + +++ +
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD T+ +I K A R +M KG P+ ++ + LG+ EA
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEA 448
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G AK++ + + K + + + ++ C+ GD++ + + R + E
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKG 293
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ I+ + K A T +M K G +P+ CS+LI
Sbjct: 294 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G E+A +L + K ++ + N+++ C++GD++ + + E
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I + K + A+ +M KG QP + ++L+
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 49/120 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G EEA + + + K D V + + Y +TG M ++ +
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K M A +H G P+ + CS+ I L K EAL
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EEA L ++ + + D V S++ Y + G V + K+
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++I KE + A++ ++ KG + + LI L K +EA
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I + G +EA ++ + + K DV +S++ +C+ G++E + ++ I
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
+P+ ++ L+ K A + M +KG +P+ S++I K +EA
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 122 LQH 124
L H
Sbjct: 740 LFH 742
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA QL ++ AK D V +++ +C+ G ME + +++ E
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 852
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ D T+ L+ + K + M KG +P+E
Sbjct: 853 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 892
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A CRGG F A ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 200 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 259
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD +++ ++K K + M +M + P ++LI +L
Sbjct: 260 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C G +EA L RD + + DVV N++L C V +M ++ +A
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 294
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 295 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 341
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ +CR G E A++LA + Y + LCA R D +V+ M +
Sbjct: 133 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 192
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P Y H++++ + + A R + D+H +G
Sbjct: 193 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 224
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 3 SAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
SA R G + Q+ + + + D VL N+++ + C+ G+ E I + +
Sbjct: 587 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 646
Query: 63 PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ +T+ ILI+ E A + ++ KG
Sbjct: 647 PNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C +EE ++L + K D V N ++ +C+ G ++ VI ++ ++ E
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ +I F KE + A + M G +P
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC +EA L + +VV+ N+++ + C +++ + V+ ++++
Sbjct: 149 LVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMG 208
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I PD T++ LI + ++ R + DM + G P+ S++I GK
Sbjct: 209 IRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGK 260
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 10/142 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C + A + E + DV+ NS++ +G ++ + +
Sbjct: 184 IIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMG 243
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF +I F KE + A + +M ++ P +SLI L
Sbjct: 244 IHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLI----------NGL 293
Query: 121 CLQHVKDIAKDRCAMPFMRKFF 142
C+ + D AK + FF
Sbjct: 294 CIHGLLDEAKKVLNFMVSKGFF 315
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS++ R G ++A +L EA K DVV NS++ + GD++ + +++ E
Sbjct: 411 MISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKG 470
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ F K +A +M +G P
Sbjct: 471 YDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 509
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVIHVMRKLD 57
+++A C GC +EA L R + D+V N++L C R GD+E ++ M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +EA L + + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + K+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 CLQHV 125
L +V
Sbjct: 517 ELLNV 521
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVIHVMRKLD 57
+++A C GC +EA L R + D+V N++L C R GD+E ++ M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +EA L + + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + K+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 CLQHV 125
L +V
Sbjct: 517 ELLNV 521
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YCR M+ + + +++
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + K G Q E + ++ L K EAL
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+G ++A ++ + + NS+L YC + + I ++K+
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +P+
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G FE+A L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ K A + + +M G P+ SL++ L + +AL
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416
Query: 121 CL 122
L
Sbjct: 417 QL 418
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA Q + + D + S++ A CR + + ++ +L
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++IL+ K A + +M KGHQP+
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+ C+ G +EA++L ++ K +++ NS L C+ +MR L +
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172
Query: 59 --LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM--- 113
L +SPD TF LI K A DM G+ P ++L+ L K
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232
Query: 114 -RAHS 117
RAH+
Sbjct: 233 ERAHA 237
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA + D A +V+ N+++ C+ ME ++ + +
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
++PD T+ +L+ F K A + M +G P + + F++
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A CRGG F A ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFG 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD +++ ++K K + M +M + P ++LI +L
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C G ++A L RD + + DVV N++L C V +M ++ +A
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF+ LI Y + ++ + + M + G P+ + +++I
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATII 304
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ +CR G E A++LA + Y + LCA R D +V+ M +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 155
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P Y H++++ + + A R + D+H +G
Sbjct: 156 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 187
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 3 SAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAIS 62
SA R G + Q+ + + + D VL N+++ + C+ G+ E I + +
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 63 PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ +T+ ILI+ E A + ++ KG
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++SA+ +EA + ++ K D+V N+M+ A CR G M+ ++ + +L++
Sbjct: 163 LLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN 222
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +F+ L++ F + ++++ R M K P +S + L + + ++A
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDA 282
Query: 120 LCL 122
L L
Sbjct: 283 LNL 285
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G +EA + ++ E + DV NS++ R G + V + + +
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SPD TF ILI KE A + + MH KG +P+
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA + + + D + N ++ C G + + ++ +++E
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD TF+++I+ KE A + + +M + P+E + S L+
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+Q+ K + D++ N+++ C G +E + L +
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMR 114
I + +++ILI + K++ A+R +M KG +P ++LI L G++R
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA L + + K ++ + + +L CR G +E ++ +
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI + M A + + M +KG P+ + +I +L K EA+
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516
Query: 121 CL 122
L
Sbjct: 517 QL 518
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G EA + + DVV+ +S++ CR G ++ + ++++
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
IS D T++ LI + ++ + M +G P+ + LI L GK+
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271
Query: 118 EALCLQHVK 126
+ L L H K
Sbjct: 272 QILELMHHK 280
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS++ R G ++A +L EA K DVV NS++ + GD++ + +++ E
Sbjct: 411 MISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKG 470
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ F K +A +M +G P
Sbjct: 471 YDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPN 509
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C GG + A +L K++ ++ NS++ +C++G + + + + +
Sbjct: 190 LVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHG 249
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++IL+ +F M LA ++M M + G +P+
Sbjct: 250 CEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPD 288
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++S FC+ G +A + + F +K+ + D++ N +L +C +E M+K++ +
Sbjct: 225 LMSGFCKSGRISKALAI-KSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERI 283
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ PD +++ L+K K AY+ M M +KG
Sbjct: 284 GMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG 319
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF G AK L + D++ +++ +C+T +E V R + E+
Sbjct: 364 LIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIG 423
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
ISPD +++ LI K A +M +G P+E
Sbjct: 424 ISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDE 463
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ E A+ + RD DVV N+++ C+ + + + ++
Sbjct: 399 VVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRG 458
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD TF ++I ++K LA + M +KG+ ++ L +LI
Sbjct: 459 CYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLI 505
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
FE A L +D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 513
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
LI + K A++ M ++ P E+ +SLI L K R
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 557
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G ++A +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ + +E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423
Query: 121 CLQHV---KDIAKDRCA 134
+ H+ + +A D
Sbjct: 424 QIWHLMMKRGVAPDEVG 440
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++AFC+ G +EA + E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 61 ISPDYNTFHILIKYFRKE 78
+S + T+ +LIK + K+
Sbjct: 258 VSRNVVTYTLLIKGYCKQ 275
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DEL 59
+I+ + G E AK + + K +VV ++ YC+ M+ V+R + +E
Sbjct: 233 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 292
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
A+ PD + +LI + + A R + +M + G + +C+SLI
Sbjct: 293 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 340
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYF 75
DV +++ M+ A+C+ G ++ ++K++ L + P+ T+H LI +
Sbjct: 191 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G +EAK + +A DVV+ N++L + G E + R+++
Sbjct: 201 LLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRG 260
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ ++ L++ A R V+M +KG P+ +L+
Sbjct: 261 CPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLV 307
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
++L +CR G ++ HV+ ++ ++PD F+ L+ F + + A+ +M +
Sbjct: 199 TALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMER 258
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEAL 120
+G P ++L+ LG EA+
Sbjct: 259 RGCPPNAVSYTTLMQGLGARGRVDEAM 285
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + +GG +EA +L + EA ++V N ++ AY R G + + + L
Sbjct: 325 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ PD T+ LI F + + Y A T +M K P + LI G+M
Sbjct: 385 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRM 437
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ A+C+ G EA+ D+ + N+M+ + G +E + ++ ++ + +
Sbjct: 607 VLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQL 666
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T++ L+ + +E MY A M +M + G P ++L++ K
Sbjct: 667 KPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTK 717
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVIHVMRKLDEL 59
+IS R F+E L + + + + V N ML Y + GD + + + +++ +L
Sbjct: 219 LISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL 278
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISPD T++ +I + A R +M + G P ++L+ GK H EA
Sbjct: 279 EISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEA 338
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + R G + +A+++ + +++ N++L +Y + G M+ V +
Sbjct: 676 LMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAAR 735
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ PD TF+ L+ + +Y A + M + G QP +
Sbjct: 736 VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQ 775
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISAF R +E+A + + ++V N ++ Y R ++ ++ V + + E
Sbjct: 395 LISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKN 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+PD T++ L+K F M +M + G+ P
Sbjct: 455 CTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMP 492
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
FE A L +D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
LI + K A++ M ++ P E+ +SLI L K R
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 64/125 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G ++A +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ + +E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 121 CLQHV 125
+ H+
Sbjct: 458 QIWHL 462
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++AFC+ G +EA + E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 61 ISPDYNTFHILIKYFRKE 78
+S + T+ +LIK + K+
Sbjct: 292 VSRNVVTYTLLIKGYCKQ 309
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ + A++L K +VV N+++ YC+ G+M++ + K+ E
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 61 ISPDYNTFHILIK 73
ISP T+ LI
Sbjct: 850 ISPSVVTYSALIN 862
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DEL 59
+I+ + G E AK + + K +VV ++ YC+ M+ V+R + +E
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
A+ PD + +LI + + A R + +M + G + +C+SLI
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYF 75
DV +++ M+ A+C+ G ++ ++K++ L + P+ T+H LI +
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CRG +EA +L + + +VV S+L C+ G ++ + + ++
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG 152
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD +++LI F K+ AYR +M +KG P
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G EA +L + + DVV N+++ C G ++R++
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD +++ILI + K A + ++ K G +P+ S++I
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S F R G F + L +D + ++ N++L +C+ GDM + ++ L
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD +++ L++ + A R + +M + G P+
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPD 296
>gi|147854551|emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]
Length = 381
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C+ G +EA +L K +VV+ +++ +C+ ++ + + RK+
Sbjct: 216 MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLDDAVRIFRKMQNNG 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISP+ ++ +LI+ K +A V+M + GH P LI K + EA
Sbjct: 276 ISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEA 334
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EEA L ++ + K + V N+++ YC+ G+ME I V ++ E
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ TF LI + K A +M KG P+ ++LI
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E+A ++ K + +++ ++++ YC+ G ME+ + + ++
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI K+ A+R +M + G P S LI L K S+A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 121 CL 122
L
Sbjct: 529 KL 530
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ A++ D + ++ + N ++ YC+ G++ + + ++++
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ ILIK A + +M KKG P ++LI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CRG +EA +L + + +VV S+L C+ G ++ + + ++
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG 152
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD +++LI F K+ AYR +M +KG P
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G EA +L + + DVV N+++ C G ++R++
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD +++ILI + K A + ++ K G +P+ S++I
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S F R G F + L +D + ++ N++L +C+ GDM + ++ L
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD +++ LI+ + A R + +M + G P+
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G EA++L R+ D+V N ++ Y ++G ++ I + ++ +
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD ++ +I + A+ DM G P+ + L+ L
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G +EAK + +A DVV+ N++L + G E + R+++
Sbjct: 189 LLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRG 248
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ ++ L++ A R V+M +KG P+ +L+
Sbjct: 249 CPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLV 295
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
++L +CR G ++ HV+ ++ ++PD F+ L+ F + + A+ +M +
Sbjct: 187 TALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMER 246
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEAL 120
+G P ++L+ LG EA+
Sbjct: 247 RGCPPNAVSYTTLMQGLGARGRVDEAM 273
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G +EAK + +A DVV+ N++L + G E + R+++
Sbjct: 201 LLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRG 260
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ ++ L++ A R V+M +KG P+ +L+
Sbjct: 261 CPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLV 307
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
++L +CR G ++ HV+ ++ ++PD F+ L+ F + + A+ +M +
Sbjct: 199 TALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMER 258
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEAL 120
+G P ++L+ LG EA+
Sbjct: 259 RGCPPNAVSYTTLMQGLGARGRVDEAM 285
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G +++A +LA++ DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI KE+ A M +G P+ ++LI L KM AL
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 121 CL 122
L
Sbjct: 612 NL 613
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ +A +L++ + D+V N+++ C+ G M + ++++ KL
Sbjct: 562 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 621
Query: 61 ISPDYNTFHILIKYFRKEKMY----MLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ PD T++ILI + K ++ ML R M + G + ++ F K+ H
Sbjct: 622 VHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNF---KLYLH 678
Query: 117 SEALCLQHVKDIAKDRC 133
++ QH K C
Sbjct: 679 TKGDDFQHSLGCVKPSC 695
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 40/75 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +FC+ G +++ + L + AK + N M+ A C+ G M+ + +++++
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446
Query: 61 ISPDYNTFHILIKYF 75
+PD +++ +I +
Sbjct: 447 CNPDICSYNTIIYHL 461
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A C+ G +EA L ++ ++ D+ N+++ C ME H+ L E
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDM 91
+ + T++ +I ++ + A R +M
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEM 512
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EEA L ++ + K + V N+++ YC+ G+ME I V ++ E
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ TF LI + K A +M KG P+ ++LI
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E+A ++ K + +++ ++++ YC+ G ME+ + + ++
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI K+ A+R +M + G P S LI L K S+A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 121 CL 122
L
Sbjct: 529 KL 530
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ A++ D + ++ + N ++ YC+ G++ + + ++++
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ ILIK A + +M KKG P ++LI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G +++A +LA++ DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI KE+ A M +G P+ ++LI L KM AL
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 121 CL 122
L
Sbjct: 596 NL 597
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ +A +L++ + D+V N+++ C+ G M + ++++ KL
Sbjct: 546 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 605
Query: 61 ISPDYNTFHILIKYFRKEKMY----MLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ PD T++ILI + K ++ ML R M + G + ++ F K+ H
Sbjct: 606 VHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNF---KLYLH 662
Query: 117 SEALCLQHVKDIAKDRC 133
++ QH K C
Sbjct: 663 TKGDDFQHSLGCVKPSC 679
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 40/75 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +FC+ G +++ + L + AK + N M+ A C+ G M+ + +++++
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430
Query: 61 ISPDYNTFHILIKYF 75
+PD +++ +I +
Sbjct: 431 CNPDICSYNTIIYHL 445
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A C+ G +EA L ++ ++ D+ N+++ C ME H+ L E
Sbjct: 406 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDM 91
+ + T++ +I ++ + A R +M
Sbjct: 466 VVANGITYNTIIHALLRDGRWQDAVRLAKEM 496
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR G + A + + D+V N+++ CRTG + + V KLDE+
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ ++++ L A ++ + +G P+E +SLI
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLI 460
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS CR G +EA +L D ++ + +VV N +L C+ I V+ + E
Sbjct: 459 LISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG 518
Query: 61 ISPDYNTFHILIK 73
P+ T+ +LI+
Sbjct: 519 CQPNETTYILLIE 531
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS F + E A ++ +++ DVV N M+ ++C G ++ + + +L +
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P T+ ILI+ + +A + + +M KG +P+
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G +EA +L + + + +V+ N+++ C+TG+ + V +K+++
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++ +I K+++ A + +M +G P
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRT 87
++V LN ++ CR ++ + ++ K+ +L I P +TF+ LI E A
Sbjct: 121 HNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVEL 180
Query: 88 MVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+M ++GH+P +++I L K S A+
Sbjct: 181 FNEMVRRGHEPNVISYNTIINGLCKTGNTSMAV 213
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ +EAK L + K D V ++++ C+ G + +++ +++
Sbjct: 374 LINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T+ IL+ F K A + + M +K +P
Sbjct: 434 LLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVV----LLNSMLCAYCRTGDMESVIHVMRKL 56
++ FC+ G +EA +L + + K + ++V L+ M A G +E + KL
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIA----GKLEVAKELFSKL 499
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
I P T+ ++IK KE + AY M G P CS + G ++
Sbjct: 500 FADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS--CSYNVMIQGFLQNQ 557
Query: 117 SEALCLQHVKDIAKDR 132
+ ++ + ++ R
Sbjct: 558 DSSTAIRLIDEMVGKR 573
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EA+ + K + ++ N+++ YC M V +
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P ++++ILI F K + A + +M+ K P+ S+L+ L + EAL
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423
Query: 121 CLQHVKDIAKDRCA 134
+I K+ C+
Sbjct: 424 ------NIFKEMCS 431
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I GC + AK++ D + K D VL NS+L AYC++G +E+ + + +
Sbjct: 17 IIDTLGSSGCLDLAKKIFSDMDDSVKK-DTVLYNSLLHAYCKSGQVETANELFNSMKQKD 75
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMV-DMHKKGHQPE 99
PD +T++ ++ + K + + ++ +M +G QP+
Sbjct: 76 CRPDLSTYNTIMNMYVKTDVGLTKVLSLFKEMCLQGIQPD 115
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+G F+EA L + +VV+ N+++ C+ D+ + + V +++
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D T++ LI + A R + DM K+ P ++LI
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ E+ +L + + D N+++ YC+ G + V ++ +
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 61 ISPDYNTFHILI 72
+SPD T++IL+
Sbjct: 390 VSPDIVTYNILL 401
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 41/102 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G E+A + D + D++ N ++ CRT ++ + R L
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD + +I ++ + A + M + G P E +
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
>gi|326494062|dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G E+AK L R E++ + DV + ++ Y + G ++ ++R+ ++
Sbjct: 408 VITGLSKEGEMEDAKDLIRVMESRGLRPDVYTYSVIMSGYAKGGMIDEAHSLLREAKKIH 467
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+HILI+ + K + + A + +M + G QP + + LI ++L
Sbjct: 468 PKPSRVTYHILIRGYCKMEEFEKALECLKEMKEDGLQPNMDEYNKLI----------QSL 517
Query: 121 CLQ 123
CL+
Sbjct: 518 CLK 520
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR +AK+L + N ++ + G+ME ++R ++
Sbjct: 373 VIHSLCRMKNVNDAKKLLMRMVNLGPAPGSAVFNFVITGLSKEGEMEDAKDLIRVMESRG 432
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +++ + K M A+ + + K +P LI KM +AL
Sbjct: 433 LRPDVYTYSVIMSGYAKGGMIDEAHSLLREAKKIHPKPSRVTYHILIRGYCKMEEFEKAL 492
Query: 121 -CLQHVKD 127
CL+ +K+
Sbjct: 493 ECLKEMKE 500
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EEA L ++ + K + V N+++ YC+ G+ME I V ++ E
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ TF LI + K A +M KG P+ ++LI
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E+A ++ K + +++ ++++ YC+ G ME+ + + ++
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI K+ A+R +M + G P S LI L K S+A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 121 CL 122
L
Sbjct: 529 KL 530
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ A++ D + ++ + N ++ YC+ G++ + + ++++
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ ILIK A + +M KKG P ++LI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
EAK+ E K K DVV SM+ + + G +++V+ + ++ E + PD ++ ++
Sbjct: 269 EAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNAVV 328
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
K + A + M +KG P+ +SLI L K R EA
Sbjct: 329 YALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEA 375
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A +G C EAK L R E K D NS++ C+ ++ ++ +
Sbjct: 327 VVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 386
Query: 61 ISPDYNTFHILIKYFR 76
+SP TFH L+ R
Sbjct: 387 LSPSVRTFHALLDVAR 402
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS F + G + +L + D + N+++ A + + ++R ++E
Sbjct: 292 MISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKG 351
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD TF+ LI+ K + A + + DM +G P
Sbjct: 352 VAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSP 389
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQ-LARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++ +CR G EAK L + EA ++ D+V+ N++L AY G M +++++
Sbjct: 251 LLYGWCREGKLIEAKHVLVQMREAGFEP-DIVVFNNLLSAYSMAGKMTDAFDLLKEMVRK 309
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ N++ I+I+ F ++ A R V+M + G + + ++LI
Sbjct: 310 GCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALI 357
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G ++A L D ++ + S+L +CR G + HV+ ++ E
Sbjct: 217 LLDALCKNGSVKQAASLFEDMRVRFSP-SLRHFTSLLYGWCREGKLIEAKHVLVQMREAG 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD F+ L+ + A+ + +M +KG +P
Sbjct: 276 FEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPN 314
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 4 AFCRGGCFEEAKQLARDFEAK--YDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
AF +G F + R +A+ +D+ DVV +++LC Y R G +E V+ ++ ++++
Sbjct: 151 AFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEK 210
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLG 111
I P+ +++ ++ F + + A MH G P++ SS++ +G
Sbjct: 211 SGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVG 263
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + E K DVV N++L C +G ++R + + +
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I+PD TF LI F K+ A +M + P +S+I L
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR EEAK+L + + + K D + N+++ Y + GDM+ + V ++ L
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
P T++ LI+ + K A + +M KG P++ S+ ++ + M+ + +
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD---STYLYVIEAMKTNDD 617
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 52/92 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+++ N+++ +C G+++ +++++D + PD TF+ L++ + +E+ A + +
Sbjct: 461 DIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLL 520
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+M ++G +P+ ++LI K +AL
Sbjct: 521 DEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ CR G +++AK E K +VV N+++ YC G E+ + + + +
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ I KE+ A + + + G P ++LI
Sbjct: 283 LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G + A QL ++ + D V N+++ YCR +E ++ ++ E
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA--HSE 118
I PD+ +++ LI + K A +M G P ++LI K+ H+E
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAE 587
Query: 119 AL 120
L
Sbjct: 588 EL 589
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
EEA+ + ++ K + DVV N + YCR G+ + + + ++ E I P T+
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
LI F K A K+G P+ + ++LI
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+G F+EA L + +VV+ N+++ C+ D+ + + V +++
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D T++ LI + A R + DM K+ P ++LI
Sbjct: 740 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + E K DVV N++L C +G ++R + + +
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I+PD TF LI F K+ A +M + P +S+I L
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ E+ +L + + D N+++ YC+ G + V ++ +
Sbjct: 855 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914
Query: 61 ISPDYNTFHILI 72
+SPD T++IL+
Sbjct: 915 VSPDIVTYNILL 926
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 41/102 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G E+A + D + D++ N ++ CRT ++ + R L
Sbjct: 925 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 984
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD + +I ++ + A + M + G P E +
Sbjct: 985 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YCR M+ + + +++
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + K G Q E + ++ L K EAL
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+G ++A ++ + + NS+L YC + + I ++K+
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ L+ Y K A + M K+G +P+
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + +GG +EA +L + EA ++V N ++ AY R G + + + L
Sbjct: 186 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 245
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ PD T+ LI F + + Y A T +M K P + LI G+M
Sbjct: 246 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRM 298
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+ A+C+ C + QLA YD D+ + N+M+ + G +E + ++ ++ +
Sbjct: 468 VLAYCKC-CMDNEAQLA--LNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRK 524
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD T++ L+ + +E MY A M +M + G P ++L++ K
Sbjct: 525 AQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTK 578
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVIHVMRKLDEL 59
+IS R F+E L + + + + V N ML Y + GD + + + +++ +L
Sbjct: 80 LISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL 139
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISPD T++ +I + A R +M + G P ++L+ GK H EA
Sbjct: 140 EISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEA 199
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + R G + +A+++ + +++ N++L +Y + G M+ V +
Sbjct: 537 LMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAAR 596
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ PD TF+ L+ + +Y A + M + G QP +
Sbjct: 597 VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQ 636
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISAF R +E+A + + ++V N ++ Y R ++ ++ V + + E
Sbjct: 256 LISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKN 315
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+PD T++ L+K F M +M + G+ P + + LI G+
Sbjct: 316 CTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGR 367
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
FE A L +D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
LI + K A++ M ++ P E+ +SLI L K R
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 591
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G ++A +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ + +E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 121 CLQHV---KDIAKDRCA 134
+ H+ + +A D
Sbjct: 458 QIWHLMMKRGVAPDEVG 474
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++AFC+ G +EA + E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 61 ISPDYNTFHILIKYFRKE 78
+S + T+ +LIK + K+
Sbjct: 292 VSRNVVTYTLLIKGYCKQ 309
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ + A++L K +VV N+++ YC+ G+M++ + K+ E
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 61 ISPDYNTFHILIK 73
ISP T+ LI
Sbjct: 850 ISPSVVTYSALIN 862
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DEL 59
+I+ + G E AK + + K +VV ++ YC+ M+ V+R + +E
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
A+ PD + +LI + + A R + +M + G + +C+SLI
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYF 75
DV +++ M+ A+C+ G ++ ++K++ L + P+ T+H LI +
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G +EAK + K D+V NS++ YC ++ ++ +
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ +++I+I F K KM A + +MH K P +SLI L K S AL
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405
Query: 121 CLQHVKDIAKDRCAMP 136
+ D+ DR P
Sbjct: 406 ---ELIDLMHDRGQQP 418
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ +A L + ++ ++V ++++ +C G ++ I + K+
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD TF+IL+ F KE A + M K+G +P+ +SL+
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A+ + D K V M+ +C G + + ++ K+ + +
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520
Query: 61 ISPDYNTFHILI 72
PD T+ I+I
Sbjct: 521 CIPDAITYEIII 532
>gi|224061145|ref|XP_002300357.1| predicted protein [Populus trichocarpa]
gi|222847615|gb|EEE85162.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+GG +EA ++ + E++ K DV ++ Y G ME +++ + +
Sbjct: 316 VISGYCKGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKH 375
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
T+H LI+ + K + A + +M K G QP + + LI ++L
Sbjct: 376 SKLSPVTYHALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLI----------QSL 425
Query: 121 CLQ 123
CL+
Sbjct: 426 CLK 428
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR + AKQL + + N+++ YC+ GDM+ I +M+ ++
Sbjct: 281 VIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLMESRG 340
Query: 61 ISPDYNTFHILIKYFR-----KEKMYMLA 84
+ PD T+ ++I + +E Y+L+
Sbjct: 341 LKPDVYTYTVIISGYSNGGQMEEACYILS 369
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + GG EEA + + + K+ K V ++++ YC+ + + ++ ++++
Sbjct: 351 IISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQFDKALELLAEMEKFG 410
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKG 95
+ P+ + ++ LI+ K + A + +M +KG
Sbjct: 411 VQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKG 446
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G FE+A ++ ++ + K DVV N++L Y + G V V +++ +
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDR 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ T+ LI + K +Y A + + G + + L S LI L K
Sbjct: 464 VFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK 515
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 45/75 (60%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +G +EEA ++ R+F+ K DVVL + ++ A C+ G ++S + ++ ++ +
Sbjct: 474 LIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEG 533
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ +I F
Sbjct: 534 IRPNVVTYNSIIDAF 548
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG + A ++ + K +VV ++M Y + G +E +++ ++ L
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D +++ L+ + K + A + +M G + + ++L+ GK +E
Sbjct: 394 IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV- 452
Query: 121 CLQHVKDIAKDR 132
+ K++ KDR
Sbjct: 453 -TRVFKEMKKDR 463
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + + G FE+A ++ ++ + K DVV N++L Y + G V V +++ +
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDR 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ T+ LI + K +Y A + + G + + L S LI L K
Sbjct: 464 VFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK 515
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 45/75 (60%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + +G +EEA ++ R+F+ K DVVL + ++ A C+ G ++S + ++ ++ +
Sbjct: 474 LIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEG 533
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ +I F
Sbjct: 534 IRPNVVTYNSIIDAF 548
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG + A ++ + K +VV ++M Y + G +E +++ ++ L
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D +++ L+ + K + A + +M G + + ++L+ GK +E
Sbjct: 394 IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV- 452
Query: 121 CLQHVKDIAKDR 132
+ K++ KDR
Sbjct: 453 -TRVFKEMKKDR 463
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +EA +L ++ + K +++L ++ G +E + KL
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++++IK KE + AY M G P+ CS + G ++ +
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDS--CSYNVIIQGFLQNQDSST 569
Query: 121 CLQHVKDIAKDR 132
+Q + ++ R
Sbjct: 570 AIQLIDEMVGKR 581
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EA+ ++ K + + N+++ YC M+ I V+ +
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ ++++ILI + K K A R + +M +K P+ S+L+ L ++ EAL
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431
Query: 121 CL 122
L
Sbjct: 432 NL 433
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA + + + DVV N++L +C G + + +++
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD TF+IL+ KE M A M +KG +P
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G +EA L + + +V+ N+++ C+ G+ + V RK+++
Sbjct: 172 LINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T++ +I K+++ A + +M +G P+
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPD 270
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ EAK+L + K D V ++++ C+ G +++ +++
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHS 117
+ PD + IL+ F K A + + +MH++ +P L + LI F GK+
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501
Query: 118 E 118
E
Sbjct: 502 E 502
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRT 87
++V LN ++ CR ++ + VM K+ +L I PD TF+ LI E A
Sbjct: 129 HNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGL 188
Query: 88 MVDMHKKGHQPE 99
+M GH+P
Sbjct: 189 FNEMVWSGHEPN 200
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EAK+L + + K D ++ C+ GD+ES + + +++ +
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D F LI F +E + A RT+ +M + G +P++ + +I
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A ++ ++ + + D V +++ +CR G + +R++ E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T+ ++I F K+ ++ + +M GH P
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ EA+ L + + + VV N+++ YC++G+++ + R + E
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +LI KE A + ++M +G P + ++LI
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++F R G +EA + + E K D++ NS++ + GD++ +++ E
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD T+ L++ F K + +AY +M KG QP
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR G + A ++ E + DV N++ C CR M ++ + E
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+Y T+ LI KE + A R +M KG P
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPS 411
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 41/71 (57%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G E A+ L D + + ++ ++ N+M+ YCR G +++ + V ++++
Sbjct: 278 LINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMG 337
Query: 61 ISPDYNTFHIL 71
I D T++ L
Sbjct: 338 IELDVYTYNTL 348
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + G + + + + +AK DV L +++ AYCR G++ V +
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNG 267
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P+ T+ +LI F K A + DM +G
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRG 302
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I AFC G +EA + + E ++VV+ N ++ AY R G +E +M ++ E I
Sbjct: 181 IKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGI 240
Query: 62 SPDYNTFHILIKYF---RKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T++ LI + + ++ +++A + +M G P+
Sbjct: 241 QPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPD 281
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 52/106 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + G ++EA+ L +F+ + K D+++ N +L +Y R G ++ ++
Sbjct: 393 ILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAG 452
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL 106
PD T+ LI F + + A + +M +G P+ + + L
Sbjct: 453 FLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPDPKTYAKL 498
>gi|413941674|gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 876
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI CR +EEA++L D + + +V N+++ +Y R+G+++ + ++ +++E
Sbjct: 241 MIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESG 300
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A M G +P +S I +R S+ +
Sbjct: 301 VAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGM 360
Query: 121 CLQ 123
L
Sbjct: 361 ELH 363
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++A+ ++ ++L RD + K D+V N+++ A+C G +S + V+R+++E
Sbjct: 132 LLAAYLHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSALSVLREIEEK 191
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE-EELCSSLIFHLGKMRAHSE 118
+SPD TF+ L+ + + + M P CS L+ L +++ E
Sbjct: 192 GLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSYCSKLV-GLAEVKKAGE 250
Query: 119 ALCL 122
A+ L
Sbjct: 251 AVEL 254
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DEL 59
+IS + + G + A+++ + + V+ LN++L AY + + V + R L +L
Sbjct: 97 LISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHSHKYDVVQELFRDLPTQL 156
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+I PD T++ +IK F ++ + A + ++ +KG P+ ++L+ L
Sbjct: 157 SIKPDLVTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPDSITFNTLLDGL 207
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G ++A ++ D K ++ S+L +CR G + V+ ++ E
Sbjct: 211 LLDALCKNGSVKDASKVFEDMREKIPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 269
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD F L+ + AY + DM K+G++P + LI
Sbjct: 270 LEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLI 316
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EAK++ + + D+V+ ++L Y G M ++ + +
Sbjct: 245 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRG 304
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ N + +LI+ R EK A R V+M + G + + ++LI
Sbjct: 305 YEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 352
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVIHVMRKLDEL 59
++S + G +A L D + + + ++ A CRT M+ + V +++
Sbjct: 280 LLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERY 339
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T+ LI F K M Y + DM KKG P + ++ K E
Sbjct: 340 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEE- 398
Query: 120 LCLQHVKDIAKDRC 133
CL+ ++ + + C
Sbjct: 399 -CLELIEKMKQIGC 411
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S+ C+ G ++A +L + + + DVV N M+ + GD++S ++ +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SPD T+ LI F K A M G +P+ +C S++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 48/120 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ G AK L + V N +L + C+ G ++ + ++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +F+I+I K A +V M + G P+ S LI K+ EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G +EA ++ + + D+V+ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ F K A M ++G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 121 CLQHV 125
L ++
Sbjct: 338 QLLNL 342
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G E+A +LA + + + +V ++ A+C+ G M+ + ++++ +
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 61 ISPDYNTFHILIKYF 75
+ D + LI+ F
Sbjct: 243 LEADLVVYTSLIRGF 257
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S+ C+ G ++A +L + + + DVV N M+ + GD++S ++ +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SPD T+ LI F K A M G +P+ +C S++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 48/120 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ G AK L + V N +L + C+ G ++ + ++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +F+I+I K A +V M + G P+ S LI K+ EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G E+A +LA + + + +V ++ A+C+ G M+ + ++++ +
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 61 ISPDYNTFHILIKYF 75
+ D + LI+ F
Sbjct: 243 LEADLVVYTSLIRGF 257
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G +EA ++ + + D+V+ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ F K A M ++G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+AFC+GG +A L E +VV N+++ ++G E + ++ +
Sbjct: 262 INAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKV 321
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
+P T+ +LI K +M+ A +V+M+ G P E + ++LI + EAL
Sbjct: 322 NPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALR 381
Query: 122 LQHVKDIAKDRCAMPFMRKFFI 143
+ +D AM M+ F+
Sbjct: 382 V-------RDEMAMKGMKPNFV 396
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + FEEA ++ + + + V+ N+++ YCR GDM + V ++
Sbjct: 331 LISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P++ TF+ L++ F + A + +V + G ++CS +I L + AL
Sbjct: 391 MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSAL 450
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G EA ++ + K K + V N++L +CR+ ME V+ +
Sbjct: 366 LIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + + +I + ++ A + + + + + L + L+ L K HSEA+
Sbjct: 426 LSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAI 485
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + + + + + + + M+ YC+ G+M+ ++ ++
Sbjct: 717 LIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNG 776
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK--GHQPEEELCSSLIFHLGKMRAHS 117
I+PD T++ L K + KE+ + T+ HK G EEE+ + + H K+ H+
Sbjct: 777 IAPDTVTYNALQKGYCKERELTV---TLQSDHKSNIGLPLEEEITYNTLIH--KLHPHT 830
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA L + +K DVV N+++ +C G M+ + K+
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ TF+IL+ F KE+ A + M K+G +P+ +SL+
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM 324
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ +EAK + + K DV NS++ YC ++ H+ + +
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++ I+I F K K A +MH P+ +SLI L K+ S AL
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407
Query: 121 CL---QHVKDIAKDR 132
L H + + D+
Sbjct: 408 KLVDEMHDRGVPHDK 422
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G A QL R + K + +VV+ N+++ + C+ + + ++
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 61 ISPDYNTFHILIKYF 75
ISPD T++ LI F
Sbjct: 243 ISPDVVTYNALISGF 257
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ +EA L ++ DVV NS++ C+ G + + ++ ++ +
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ D T++ ++ K A + M +G QP+
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G E+A+ + D K DV + +M+ +C G + + ++ K++E
Sbjct: 463 LVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG 522
Query: 61 ISPDYNTFHILI 72
P+ T+ I+I
Sbjct: 523 CIPNAVTYEIII 534
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + + +D + NS+L A C+ ++ I ++ K+ +
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452
Query: 61 ISPDYNTFHILI 72
I PD T+ L+
Sbjct: 453 IQPDICTYTTLV 464
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+C G E A+QL D A + D + ++ YC ++ +M ++
Sbjct: 241 VLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAG 300
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ ++I+ KE+ A +M G+ P+ LC+ ++
Sbjct: 301 VQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDTPLCAKVV 347
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA++L + E + ++ NS++ C G+++ V + E
Sbjct: 381 LIYWLCKKGMVQEARKLFDELERGFLP-SLLTYNSLIIGLCENGELQEAGRVWDDMVERR 439
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LIK F K Y +M +G P + L +L+ L K +H + +
Sbjct: 440 YEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSK-PSHDDTV 498
Query: 121 C 121
C
Sbjct: 499 C 499
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 40/91 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV ++L AYC GD+E + + PD + +LI + + A R M
Sbjct: 234 DVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIM 293
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+M G QP E S +I K R +EA
Sbjct: 294 DEMGAAGVQPNEVTYSVVIEACCKERKSTEA 324
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G EA++ +D + V + AYCR G++ S RK+ E
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+++LI + LAYR +M ++G P + + LI
Sbjct: 619 VEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLI 665
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G +EA L D V+ N ++ YCR GD+E + ++ E
Sbjct: 384 LLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ IL+K +A +M KG QP+
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + G E A+ + A + DV+ NS+L YC+ G ++ + + L
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI + + A R +M ++G P ++C+ I G A S A+
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP--DVCTYTILMKGSHNACSLAM 466
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A+CR G A R + + + + N ++ A CRTG + ++ E +
Sbjct: 595 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGL 654
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T+ +LI KE + A R +MH+ G P+
Sbjct: 655 VPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692
>gi|413941673|gb|AFW74322.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 1028
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI CR +EEA++L D + + +V N+++ +Y R+G+++ + ++ +++E
Sbjct: 241 MIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESG 300
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A M G +P +S I +R S+ +
Sbjct: 301 VAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGM 360
Query: 121 CLQ 123
L
Sbjct: 361 ELH 363
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ + A ++ ++ DV+ N++L C+ G E V+ + + ++E
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+P+ T++I++ K K A + +M KG +P+
Sbjct: 501 CTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ GC +A L D AK D+ N+++ YC+ ++S ++ ++
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ L+ K M +KG P + ++ L K + +EA+
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAV 525
Query: 121 CL 122
L
Sbjct: 526 DL 527
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G ++A ++ +D K K D S++ +C+ GD + + V +
Sbjct: 301 IIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKG 360
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ LIK ++ + + A + M +M + G P + +I L KM S+A
Sbjct: 361 LRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD-EL 59
++ + C+ EA L + ++K K DVV ++ +C+ GD++ + R+++ +
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ T++I++ F ++ +A + M G P+
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDN 611
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EA ++ + K DV ++ CR G ++ + K+ E
Sbjct: 16 IISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERG 75
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
S + ++ LI K++ AY+ + +M KG++P+ ++++ L +M SEA
Sbjct: 76 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEA 134
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD--E 58
++S CR G EAKQ ++ DVV N +L A + G + + + +D +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
++PD T++ LI F + + A + D+ KG+ P+ +S++ L + E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 119 A 119
A
Sbjct: 241 A 241
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR +EA +L +D AK D V NS+L R +M+ + +K+ +
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P+ T+ I++ + +M +K P+ LC+++I L K + +A
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S CR G +L + K DV+L N+++ C+ ++ V+ ++ ++
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++IL+ K + A+ M G P+
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G E A L + + K D + ++M+ C++GDM++V +++ + +
Sbjct: 446 LLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEG 504
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T+ +LI + K A R + M G P+ + SLI
Sbjct: 505 LAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLI 551
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G +++ ++ D + K DV++ ++ C+ G V + +
Sbjct: 199 LLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI KE A +M KG P+ ++LI L + EA+
Sbjct: 259 LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAM 318
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G + KQL +D + D V + ++ Y + GD+E V++++
Sbjct: 480 MIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASG 539
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD F LIK + E + + +M K + ++ S++I
Sbjct: 540 FVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C + A +L + + +VV+ + +L YCR+G + V V +
Sbjct: 164 LIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRG 223
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD F LI KE A + M ++G +P + LI L K + EAL
Sbjct: 224 IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREAL 283
Query: 121 CLQHVKD 127
L+ D
Sbjct: 284 TLRKEMD 290
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S F R +++A+ + + D+V NS++ Y R G+ +++ L++
Sbjct: 644 MLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 703
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD +++ +IK F ++ + A R + +M ++G +P
Sbjct: 704 LKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRP 741
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP--- 63
RG C++ A+++ + E K D+V N+++ +CR G M+ + ++ ++ E I P
Sbjct: 686 RGECWK-AEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIF 744
Query: 64 DYNTF 68
YNTF
Sbjct: 745 TYNTF 749
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 50/118 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G + EA + ++ E D V N ++ AY R G + V+ + +
Sbjct: 329 LLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKG 388
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ P+ T+ +I + K A + M + G P ++++ LGK +E
Sbjct: 389 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNE 446
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA R G EAK + ++ + V N++L + + G + V+++++E
Sbjct: 294 VLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENN 353
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ L+ + + A + M +KG P +++I GK EAL
Sbjct: 354 CPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEAL 413
Query: 121 CL 122
L
Sbjct: 414 KL 415
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA L + +K DVV ++++ +C G + I + K+
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD TF IL+ F KE A + M K+G +P+
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD 300
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + + +D + NS+L A C+ ++ I ++ K+ +
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I PD T+ ILI K A D+ KG+
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +EAK + + K DVV S++ YC + + + +
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + +++I+I F K K A +MH K P+ +SLI L K S AL
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391
Query: 121 CL 122
L
Sbjct: 392 KL 393
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ FC+ +EA L ++ K DVV NS++ C++G + + ++ ++ +
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ D T++ ++ K A + M +G QP+
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G A QL R + K + +VV+ N+++ + C+ + + ++
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226
Query: 61 ISPDYNTFHILIKYF 75
ISPD T+ LI F
Sbjct: 227 ISPDVVTYSALISGF 241
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AFCR G + A + + D+V N++L C+ G + + + KL E+
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SP+ ++++ + + A +++M G P+E +S+I
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMI 476
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++ A G +EE ++L + F K D +VV + ++ CR G +E +++++ + E
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEK 358
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD ++ LI F +E +A + M G P+
Sbjct: 359 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 398
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A ++ R+ E K + DV+ N +L A G E +M K+
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T+ ILI ++ A + M +KG P+
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 363
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A L + E K +++ N ++ +C G + ++R + +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ TF +LI F KE A +M +G P+ +SLI K +A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA- 387
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
+ D+ + P +R F I
Sbjct: 388 --NQMVDLMVSKGCDPNIRTFNIL 409
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G AK+L ++ ++ ++V +L C G+ E + + K+++
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++I+I A+ + KG +P + + +I L K SEA
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A R G +E K+L + E K +V N ++ CR G+++ + + +D+
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T+ ILI F K+K A + +M KG +P ++LI
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G EA ++ + A+ K ++ N+++ C+ GDME ++ ++ +
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I PD T++ +I+ + KE+ + +M K P C +I L
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGL 456
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G F+EA ++ + + K + DV+ NS++ C++ ME + ++ E
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI + K +A R +M G P + +C++LI K + +EA
Sbjct: 547 LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606
Query: 121 CL 122
+
Sbjct: 607 SI 608
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 36 MLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++ CR G +E V + L + P+ + LIK +E + A R + M KKG
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 96 HQPEEELCSSLIFHLGKMRAHSEA 119
QP+ +S+I L K R EA
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEA 535
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G E A++L K ++ V +++ YC++G++ + ++
Sbjct: 697 LINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG 756
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD + LI RKE A ++ +KG L
Sbjct: 757 VPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL 798
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA+Q D + + + + ++L Y G + + ++
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ ++I KE ++ + + DM KKG + +C LI L + SE L
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVL 955
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G +A QL K +++ N+++ C+ G++E + +
Sbjct: 662 IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + T+ +I + K A+R +M KG P+ + S+LI K +AL
Sbjct: 722 LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKAL 781
Query: 121 CL 122
L
Sbjct: 782 SL 783
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 33 LNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
LN+++ +C++G + ++ + + + PD+ T+ ILI Y K A + VDM
Sbjct: 798 LNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQ 857
Query: 93 KKGHQPEEELCSSLI--FHLGKMRAHSEALCLQHV-KDIAKDRCAMPFM 138
K+ P ++L+ +++ R+ AL + + KDI D M
Sbjct: 858 KRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVM 906
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G E+A ++ + K + V+ +++ + + G + + +++ +D+
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD ++ +I K + A +V+M ++G +P +LI
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALI 558
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EA + R + DV ++++ R G ++ + ++ + E
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD T++ +I F K+ A++ M +KG P ++LI L
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 51/120 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G E A +L R E D N+++ A C+ G + + L+
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI K +A++ + M G P+ SS I HL KM+ E L
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 52/116 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ G ++A L E + K + V NS++ C++G + + K+
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+PD T+ I++ K K + +M +K +P + +I L K R +
Sbjct: 495 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 550
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 41/73 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C+ G +A ++ + + K +V N+++ +C G + + ++ K+
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389
Query: 61 ISPDYNTFHILIK 73
++PD T+++LI+
Sbjct: 390 VNPDAVTYNLLIR 402
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +EA +L + D+ D+ + +++ C E + ++R++ EL
Sbjct: 229 LIEGLCEAGRIDEAVELF----GEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 284
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + +E+ A + +M +KG P C+++I K S+AL
Sbjct: 285 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 344
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A + + K D N M+ YC G +E + +++K+
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +LI+Y+ K A M +KG +P +S I+H+ + ++
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKP-----NSTIYHI-LLHGYATKG 354
Query: 121 CLQHVKDIAK--DRCAMPFMRKFF 142
L V+D+ R +PF + F
Sbjct: 355 ALIDVRDLLDLMIRDGIPFEHRAF 378
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A L + + DVV NS++ C+ M+ + +++ + +
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++I+I+ + A R + M G QP+ S LI + K+ +EA
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + G EA L R E D+ N +L + RTG I + +
Sbjct: 520 LMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD T++ L+ F M+ A R M +M KG + + SS++ +G M
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVGNM 632
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+ + G + A + + + + DVV ++++ A CR G M+ + ++ +
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++P +T+H LI+ F + A ++ M KG +P+
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ G ++A+ + K K D+ ML Y G + + + +
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKM 113
I+PD + F++LIK + K M A +M ++G +P+ S++I L GKM
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKM 442
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ ++A+ + R K D NS++ Y TG + + V +K+
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD T + L+ K A M KG + +
Sbjct: 317 ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTD 355
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A+C+ G EEA+ + + + +VV N+++ Y + DM+ + V +L +
Sbjct: 374 LNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGL 433
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+PD T+ +I+ F + Y A + G +P
Sbjct: 434 APDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPN 471
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A+ + G EE + + E ++D N M+ Y R G +E V +V+ +L
Sbjct: 827 MLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVANVLAELKSRG 886
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ LIK + M A + M +M KG + ++LI L + EA+
Sbjct: 887 GEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAALQRNENFLEAV 946
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A+C+ G EEA+ + + + +VV N+++ Y + DM+ + V +L +
Sbjct: 374 LNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGL 433
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+PD T+ +I+ F + Y A + G +P
Sbjct: 434 APDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPN 471
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A+ + G EE + + E ++D N M+ Y R G +E V +V+ +L
Sbjct: 827 MLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVANVLAELKSRG 886
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ LIK + M A + M +M KG + ++LI L + EA+
Sbjct: 887 GEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAALQRNENFLEAV 946
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G +++A +LA++ DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI KE+ A M +G P+ ++LI L KM AL
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 121 CL 122
L
Sbjct: 612 NL 613
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ +A +L++ + D+V N+++ C+ G M + ++++ KL
Sbjct: 562 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 621
Query: 61 ISPDYNTFHILIKYFRKEKMY----MLAYRTM 88
+ PD T++ILI + K ++ ML R M
Sbjct: 622 VHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 40/75 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +FC+ G +++ + L + AK + N M+ A C+ G M+ + +++++
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446
Query: 61 ISPDYNTFHILIKYF 75
+PD +++ +I +
Sbjct: 447 CNPDICSYNTIIYHL 461
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A C+ G +EA L ++ ++ D+ N+++ C ME H+ L E
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDM 91
+ + T++ +I ++ + A R +M
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEM 512
>gi|393245243|gb|EJD52754.1| hypothetical protein AURDEDRAFT_98234 [Auricularia delicata
TFB-10046 SS5]
Length = 432
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
++A L D A D+V +N ++ A + GD+ + + + + ++PD +TF+IL
Sbjct: 245 DDAFNLLYDLHADGRVVDIVAMNCVVEAAAKQGDLGRAVGIYKSAGDWDLAPDTSTFNIL 304
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ R L R + +M ++G +P+ +LI
Sbjct: 305 LDGCRAHGQVELPERILAEMQERGVRPDARTFETLI 340
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A CRG E A+ + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 220 LVTALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRG 279
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + +L+ K A R M G P+ S LI
Sbjct: 280 VEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPDAIAYSVLI 326
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 37/76 (48%)
Query: 32 LLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDM 91
+ N +L C+ ++ + V ++ + PD++T+ L+ + + M +M
Sbjct: 426 MYNMILDCLCQCDSVDDALDVKVEMSSREVRPDFHTYQALVTCLCRLGKSLDGKSVMAEM 485
Query: 92 HKKGHQPEEELCSSLI 107
+ G QP E +C++L+
Sbjct: 486 IESGLQPNEAICTALV 501
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++A + D A + D + +++ C+ G+ ++ I +MR L+E +
Sbjct: 145 LIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERS 204
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++I+I K K+ A +M+ K P ++LI+ M EA+
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAV 264
Query: 121 CLQH---VKDIAKD 131
L + +K+I D
Sbjct: 265 ALLNEMKLKNINPD 278
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G + A QL R+ E + K DVV+ N ++ + C+ + ++ +++
Sbjct: 180 LINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQ 239
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I P+ T+ LI F + A + +M K P+ S LI LGK
Sbjct: 240 IYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGK 291
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA L + AK +VV +++ +C G + + ++ ++
Sbjct: 215 IIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKN 274
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD TF ILI KE A + M K +P+ +SL+
Sbjct: 275 INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLV 321
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A + G + AK + Y K DVV NS++ Y +++ +V + +
Sbjct: 285 LIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSG 344
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P ++ I+I K KM A +M K P +SLI L K
Sbjct: 345 VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCK 396
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +A+ + DV L N M+ Y + GD+E + + ++L + A
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I+P TF+ LI F K + + A R + + G +P ++L+ G +
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLH 521
Query: 118 EALCLQHVKDI 128
E L ++KDI
Sbjct: 522 ELLLEMNLKDI 532
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EEA +L RD + + +V+L + +L + C+ G ++ + ++ +++
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356
Query: 61 ISPDYNTFHILI 72
+ PD T+ ILI
Sbjct: 357 LQPDLVTYSILI 368
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ EA++L + + V +++ AYC G++ + ++ +++
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T+ ++IK K++ + + + DM KG P++ +++I
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTII 578
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A+ G A L F+ D DVV N+++ YC+ G + + + ++
Sbjct: 89 MLTAYSHAGDISTAVAL---FDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 144
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF +L+K + L + K G + + S+L+ GK R+ +AL
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 121 C 121
C
Sbjct: 205 C 205
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLD 57
++ AF + G ++ L +D + DV N ++ AY + G +ME+V+ MR +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
PD TF++LI + K++ + +T + + +P +S+I + GK R
Sbjct: 274 ---CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKAR 327
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A+ G A L F+ D DVV N+++ YC+ G + + + ++
Sbjct: 89 MLTAYSHAGDISTAVAL---FDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 144
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF +L+K + L + K G + + S+L+ GK R+ +AL
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 121 C 121
C
Sbjct: 205 C 205
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C C E AK+L + + + D+ +++ + G+++ + ++ ++ ELA
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + + L+ F + A + +M +KG PEE LC L+ K EA+
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705
Query: 121 CLQH 124
L++
Sbjct: 706 ELKN 709
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G EE L + + D++ N ++ YC+ M ++
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ LI F KE M A + + DM + G P E +SLI
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G E +++L DVV NS++ Y + G +E V + ++ ++
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 295
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ LI Y + EKM A+ +M G +P S+LI
Sbjct: 296 CVPDIITYNGLINCYCKFEKMPR-AFEYFSEMKNNGLKPNVVTYSTLI 342
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EA +L D K ++V ++L C+ G M V R + +
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF-HLGKMRAHSEA 119
ISP+ + L+ + K + A + + M + +P+ L S+I+ H + +
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 495
Query: 120 LCLQHVKDIAKDRCAMPFMRKFFI 143
L L+ +K ++ A P + I
Sbjct: 496 LILEEMK--SRGISANPVISTTII 517
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + R G +A+ L ++ D V NS+L A+ + G+ E V + ++ ++
Sbjct: 377 MISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMG 436
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K + A R DM G P+ + LI LGK EA
Sbjct: 437 FGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEA 495
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA R +EA + E+ + D+ N+M+ Y R G H+ KL
Sbjct: 342 LISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNG 401
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F KE +M K G +E +++I GK H EAL
Sbjct: 402 FSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461
Query: 121 CL 122
L
Sbjct: 462 RL 463
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+AF + +++A++L + + K D + M+ Y +GD + +++ + E
Sbjct: 1040 MIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAG 1099
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P+ T H+L+ + K A R + ++ G
Sbjct: 1100 IEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMG 1134
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 3/146 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + G E+ + ++ + D + N+++ Y + G + + + R +
Sbjct: 412 LLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSG 471
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHS 117
+PD T+ +LI K A + M +M G +P S+LI +G+
Sbjct: 472 RNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAE 531
Query: 118 EALCLQHVKDIAKDRCAMPFMRKFFI 143
E I D A M FF+
Sbjct: 532 ETFNRMRESGIKADHLAYSVMLDFFL 557
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A+ G A L F+ D DVV N+++ YC+ G + + + ++
Sbjct: 131 MLTAYSHAGDISTAVAL---FDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 186
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF +L+K + L + K G + + S+L+ GK R+ +AL
Sbjct: 187 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 246
Query: 121 C 121
C
Sbjct: 247 C 247
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G A +L AK + +VV NS++ +C+ G + V ++ L
Sbjct: 257 LIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLN 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P+ T++ LI + + R +M + G + + ++LI L K
Sbjct: 317 VAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCK 368
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G E+A Q+ + E+ + N+++ YCR G + S + + +
Sbjct: 222 VMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKG 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + TF+ LI F KE A + +M P ++LI
Sbjct: 282 VEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLI 328
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+V N ++ A+C++G +E + V +++ + ISP+ +++ LI + ++ + A +
Sbjct: 215 NVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLK 274
Query: 89 VDMHKKGHQPEEELCSSLIFHL---GKMRAHSEALCLQHVKDIAKD 131
M KG + +SLI GK+ S+ V ++A +
Sbjct: 275 NSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPN 320
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G E ++L + K D++ N+++ C+ G + +++++LD+
Sbjct: 327 LINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKEN 386
Query: 61 ISPDYNTFHILIK----YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ +TF LI ++ + L Y++MV + G P E+ + L+
Sbjct: 387 LVPNASTFSALISGQCIRNNSDRAFQL-YKSMVRI---GCHPNEQTFNMLV 433
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + G EA L R E + D+ N +L + RTG I + +
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD T++ L+ F M+ A R M +M KG + + SS++ +G +
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 1 MISAFCRG-GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++ +C G EA ++ R+ + YDVV S++ Y + G++ V + ++ E+
Sbjct: 274 VLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEV 333
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ +I K + A M M +KG P +SLI L + R EA
Sbjct: 334 GIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEA 393
Query: 120 LCL 122
L
Sbjct: 394 RGL 396
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A+ G A L F+ D DVV N+++ YC+ G + + + ++
Sbjct: 89 MLTAYSHAGDISTAVAL---FDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 144
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF +L+K + L + K G + + S+L+ GK R+ +AL
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 121 C 121
C
Sbjct: 205 C 205
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLD 57
++ AF + G ++ L +D + DV N ++ AY + G +ME+V+ MR +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
PD TF++LI + K++ + +T + + +P +S+I + GK R
Sbjct: 274 ---CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKAR 327
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ F++A+ + + DVV S + AYC+ GD V ++ ++ E
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+P+ T+ I++ K K A M + G P+ + SSLI L K
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + G EA L R E + D+ N +L + RTG I + +
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD T++ L+ F M+ A R M +M KG + + SS++ +G +
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA C+ G A +L + K + V N+++ C G +E + ++ ++
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF LI F + R +V + +GH+ E + SSLI L K ++A+
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL--DE 58
+I+ C+ G F EA + + ++ K DVV +SM+ +C +E + + ++
Sbjct: 456 LINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQG 515
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELC 103
+ PD T++IL+ F +K A + M +G P+ C
Sbjct: 516 PVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITC 560
>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G EEAK A + DV NS+ A C GD+E + ++
Sbjct: 258 LVDGLVRAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRG 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R + GH+P L ++++ L K ++A
Sbjct: 318 MCPDISTYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAF 377
>gi|225428364|ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Vitis vinifera]
Length = 380
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C+ G +EA +L K +VV+ +++ +C+ + + + RK+
Sbjct: 215 MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLNDAVRIFRKMQNNG 274
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISP+ ++ +LI+ K +A V+M + GH P LI K + EA
Sbjct: 275 ISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEA 333
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVM-RKLDEL 59
+++AFC+ +EA +L + K + DVV ++++ C+TG + + ++ K+ E
Sbjct: 84 LLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER 143
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
S + ++ LI K++ AY+ + +M KG+ P+ ++++ L +M SEA
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ E A +L + +K D + N++L CR G + +
Sbjct: 155 LINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 214
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD ++ L+ KE A + D+ KG+ P+ +S++ L + EA
Sbjct: 215 YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G +EA +L +D AK D V NS+L R +M+ + +K+
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+P+ T+ I++ + K A++ + +M K G P+
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD 323
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
++ +FC+ G + +L FE D D + N ++ Y + G ++ + ++
Sbjct: 14 VLKSFCKQGKLRDGYKL---FEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P T++ L+ F KE A M +KG +P+ S++I L K +
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130
Query: 118 EAL 120
EAL
Sbjct: 131 EAL 133
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR EA +L ++ + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P TF L+ + K A R + M + G P + ++LI L K
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +EA ++ R + + V+ N+++ C+ GD++ I + ++ E +
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ + TF+ L+K R + M A+ M M ++ P+
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G F +L + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
I P+ ++ LI + K LA +M +K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + G E+A +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ K + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G +EA L D V+ N+++ YCR GD+ + ++ E
Sbjct: 384 LLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ IL+ RK + +A +M KG QP+
Sbjct: 444 CFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPD 482
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G EA++L + + VV ++ CR G++ S RK+ ++
Sbjct: 559 LIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVG 618
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+++LI LA+R +M ++G P + + LI
Sbjct: 619 IEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLI 665
>gi|395334592|gb|EJF66968.1| hypothetical protein DICSQDRAFT_142537 [Dichomitus squalens
LYAD-421 SS1]
Length = 488
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+AK + E+K K DVV LN+ + Y R GD+++V ++RK + PD TF L+
Sbjct: 232 QAKAILDQMESKGPKPDVVTLNTFIRHYGRKGDLKAVAQILRKFQPAELKPDIYTFSTLL 291
Query: 73 KYFRKEKMYMLAYRTMVDMHKK-GHQPE 99
K + A R ++++ KK G P+
Sbjct: 292 SAMLKIRPD--ADRIVINLMKKYGVSPD 317
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EA L D ++ K V S+L +C+ G + HV+ ++ ++
Sbjct: 233 LLDALCKNGSVKEAASLFEDMRYRW-KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMG 291
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ L+ + + AY + +M +K +P + LI L K EA
Sbjct: 292 IEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEA 350
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G EAK + + + D+V+ N++L Y + G M +++++
Sbjct: 267 LLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKR 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ ++ +LI+ K + A R V+M G Q + S+LI
Sbjct: 327 CEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLI 373
>gi|353235446|emb|CCA67459.1| hypothetical protein PIIN_01289 [Piriformospora indica DSM 11827]
Length = 745
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
I+ + R FEEA + ++ EA K D+V N+ L Y GD +V + ++++ E
Sbjct: 476 INGYLRCQLFEEANTVLQEMEAGTGPKPDIVTYNTFLNRYMHMGDRGAVANTLQRIAEAG 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF IL K++ + + M QP EL S+ +
Sbjct: 536 LDPDLYTFTILFVGASKDRDLEMQTDIIKRMQAMHLQPGVELLSAAV 582
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +A +L R+ Y + + N ++ CR + V+ K+ E +
Sbjct: 60 VVDGLCGAGMANQALELVRELSGVYTP-TLFIYNGIITGLCRASRVMDAYKVLEKMVEES 118
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ + LA +M + G +P +LI HL + EAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ A C+ G + A++ + DVV + ++ + R G ++ + ++ + +
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKM 113
PD T+ LI KE+ + A+R + M G P +S++ L GKM
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKM 385
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ F++A +L EA +VV NS++ C++G M+ V V + +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T+ I++ K M A + + P+ S +I L + EA
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEAC 459
Query: 121 CLQH 124
+ H
Sbjct: 460 GMYH 463
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G EEA ++ ++ + V N+++ + C+ ++ + R L
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ + A +M KG +P+E + LI L R EAL
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 468
Query: 121 CLQHVKDIAKDRCA 134
L +K++ + CA
Sbjct: 469 NL--LKEMELNGCA 480
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ E+A QL + + D NS+L +C+TGD++ +++ +
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+PD T+ LI K +A R + + KG
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C EEA L ++ E +VV+ N+++ +C+ +E + +++
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+S D T++ LI K K A + M M +G +P++ +SL+ H K
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ EEA+++ + E + D V N+++ C++ +E +M ++
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ PD T++ L+ +F K A + M G P+ ++LI L G+++ S
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608
Query: 118 EAL 120
L
Sbjct: 609 RLL 611
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + ++ S + A C+ GDM+ +V++++ ++
Sbjct: 679 LIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 738
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ P+ TF LIK + K + A + +M G +P+E L+ L
Sbjct: 739 LKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSL 788
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + R+ + + + N ++ + R GD+ +M+++ E
Sbjct: 644 LLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDG 703
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +TF I K A + +M G +P + ++LI K+ AL
Sbjct: 704 IPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRAL 763
Query: 121 -CLQHVK 126
C + +K
Sbjct: 764 KCFEEMK 770
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/72 (19%), Positives = 43/72 (59%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + + E A +L ++ + K D + ++ ++++ A+C++G+M+ ++R+++E
Sbjct: 329 LIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 388
Query: 61 ISPDYNTFHILI 72
I + +H ++
Sbjct: 389 IDAPIDVYHSMM 400
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHV---MRKLDELAISPDY 65
G +A +A+D +A V NS++ YC+ G ++ HV ++++ E ISP
Sbjct: 140 GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA 199
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
TF +LI + K A R +M ++G +SLI L
Sbjct: 200 VTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 244
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 205 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K F K+ M A + M ++ +P+ + + LI LGKM
Sbjct: 265 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 320
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +A + + DVV+ N ++ Y R G ME + V + +
Sbjct: 275 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
ISP+ T++ LI F + + A + +M +KG
Sbjct: 335 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 369
>gi|259489858|ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea mays]
gi|223943533|gb|ACN25850.1| unknown [Zea mays]
Length = 322
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G E+AK A + DV NS+ A C GD++ + ++
Sbjct: 121 LVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRG 180
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD +T+ +++ K A+R + GH+P L +++I
Sbjct: 181 LCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAII 227
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A+++ R K DV+ N ++ Y G ++ + + +
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
I P+ +++ILI + ++K A + ++ +KG +P C+ L +F LG+ ++
Sbjct: 349 IEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408
Query: 118 ----EALCLQHVKDI 128
E L H+ D+
Sbjct: 409 NFFDEMLSAGHIPDL 423
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G + A L + + K D+ ++++ A C+ E+V + ++ L
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN 278
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ TF+ +I KE A M M +KG P+
Sbjct: 279 IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPD 317
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ G +EAK L + K VV ++++ YC G++++ + + ++
Sbjct: 226 LINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++I+I K K A + +M K P+ +SLI L K + AL
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345
Query: 121 CLQH 124
L +
Sbjct: 346 NLMN 349
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ +EA L R+ K D V NS++ C++G + S +++M ++
Sbjct: 296 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
D T+ L+ K + A + M ++G QP ++LI L G+++
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 415
Query: 118 E 118
E
Sbjct: 416 E 416
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++SA G F++ + RDF K DVV N ++ YC G+++S + V+ ++++
Sbjct: 131 LLSACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKR 190
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD TF+ L+ F ++ + M K P
Sbjct: 191 GIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPN 230
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
EA +L + E K + DV+ N+++ C ++E V + RKL E PD T+ LI
Sbjct: 249 EAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYMTLI 308
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
Y R++ A +++ KG L ++ L K+ EA
Sbjct: 309 PYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVVDELVKLSRVEEA 355
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ E A ++ + A ++V ++L Y GDMES V+ ++ +
Sbjct: 195 LVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 254
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ + K + A M DM K +P E +I L K + EA
Sbjct: 255 WYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA- 313
Query: 121 CLQHVKDIAKDRCAMP 136
+++ D DR MP
Sbjct: 314 --RNMFDEMLDRSFMP 327
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + G E AK++ + + D + ++ YC+ G VM +++
Sbjct: 230 ILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNE 289
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ ++I+ KEK A +M + P+ LC +I +AL
Sbjct: 290 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVI----------DAL 339
Query: 121 CLQHVKDIA 129
C H D A
Sbjct: 340 CEDHKVDEA 348
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +E +L + + + + D V N+++ AYC+ GDM S V +K+ E
Sbjct: 324 ILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESG 383
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ ++ T+ LI F K + A M G P + S L+
Sbjct: 384 LQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLV 430
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 51/106 (48%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C+ G +EA QL + A D V +++ YCR G++E + + +++ +
Sbjct: 255 IHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGM 314
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T++ +++ ++ +R + +M + Q + C++LI
Sbjct: 315 LPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLI 360
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G EEA +L EA V N++L C G+M+ V ++ ++D
Sbjct: 289 LIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRK 348
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+ D+ T + LI + K A + M + G Q +LI K R
Sbjct: 349 VQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKAR 402
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G E+A +L + K ++ + N+++ C++GD++ + + E
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I + K + A+ +M KG QP + ++L+
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 49/120 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G EEA + + + K D V + + Y +TG M ++ +
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K M A +H G P+ + CS+ I L K EAL
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EEA L ++ + + D V S++ Y + G V + K+
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++I KE + A++ ++ KG + + LI L K +EA
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I + G +EA ++ + + K DV +S++ +C+ G++E + ++ I
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
+P+ ++ L+ K A + M +KG +P+ S++I K +EA
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 122 LQH 124
L H
Sbjct: 651 LFH 653
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ +EA QL ++ AK D V +++ +C+ G ME + +++ E
Sbjct: 704 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 763
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ D T+ L+ + K + M KG +P+E
Sbjct: 764 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 803
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G +EA ++ ++ + + V N+++ C+ +E+ + R L
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI+ +A +M +KG P+E S LI L R EAL
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Query: 121 CLQHVKDIAKDRCA 134
L +K++ CA
Sbjct: 463 ML--LKEMELSGCA 474
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G ++ ++ K + DV NS++ C+ G+++ + ++ +
Sbjct: 308 LVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI KE A + KG P+ +SLI + L
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI----------QGL 417
Query: 121 CLQHVKDIA 129
CL ++IA
Sbjct: 418 CLTSNREIA 426
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ EEA QL + K D +ML +C+ GD++ +++ +
Sbjct: 518 LINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNG 577
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K +A + + + KG + + +I L K + EA+
Sbjct: 578 CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAM 637
Query: 121 CL 122
L
Sbjct: 638 RL 639
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G F+ A + + + K D + + YCR G ++ ++ K+ E
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-----GKMRA 115
+SPD T+ LIK + A+ + MH G +P + SLI HL GK++
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727
Query: 116 HSEALCL 122
+C+
Sbjct: 728 GEPGVCV 734
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G E+A + E++ + + N ++ YC+ ++ + V+ K+ E
Sbjct: 399 LINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERK 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++ LI + + AYR + M+ +G P+ +S+I L K + EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEA 516
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ R G +E KQ+ + ++ N M+ YC+ G++E + + E
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAG 248
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ T+ LI + + K A++ +M KG + E + LI L R EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAM 308
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
L VK KD P +R + +
Sbjct: 309 DL-FVK--MKDDDCYPTVRTYTVL 329
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EA + +K + + N+++ C G ++ + K+ ++
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P +T ILI K+ + AYR M G +P+ ++ I
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C E+A++L K +V+ N+++ YC+ G +E + V+ ++
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
+ P+ T++ LIK + K ++
Sbjct: 424 LRPNTRTYNELIKGYCKRNVH 444
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S R G +EA L R+ D+ N +L +TG + I + K+ E
Sbjct: 517 LMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD +++ ++ + M+ +A + M +M KG + + SS++ +GK+
Sbjct: 577 IMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKV 629
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIK 73
K DVVL+N+++ R G +E + + K+D L +P+ T++ +IK
Sbjct: 332 KPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIK 378
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G EEAK++ + ++ K D V +++ +C G ++ + +++++ E+
Sbjct: 312 LMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMK 371
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
D TF++L+K +E + A R + ++ +G
Sbjct: 372 CKADAVTFNVLLKGLCREGRFDEALRMLENLAYEG 406
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G E+A +L + K ++ + N+++ C++GD++ + + E
Sbjct: 366 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I + K + A+ +M KG QP + ++L+
Sbjct: 426 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 49/120 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G EEA + + + K D V + + Y +TG M ++ +
Sbjct: 226 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K M A +H G P+ + CS+ I L K EAL
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 345
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I + G +EA ++ + + K DV +S++ +C+ G++E + ++ I
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
+P+ ++ L+ K A + M +KG +P+ S++I K +EA
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 122 LQH 124
L H
Sbjct: 452 LFH 454
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I F R +A L + E + DV NS+L +CR M+ V+RK+ E
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
++PD +T+ +I F + A+R +M ++G P+++
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 46/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++A C+ G E+ + K D+V N+++ AY G ME +M +
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SP T++ +I K Y A +M + G P+ SL+ K
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A +L + + K + DVV N++L + + GD+++ + +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P ++ IL+ + A+R +M K +P +C+S+I
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G E A + ++ +V LN M+ A C+ G ME V + ++ E
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T++ LI + + + A+ M M KG P
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C G EA ++ + +K K V++ NSM+ YCR+G+ + K+
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
PD +++ LI F +E+ A+ + M ++
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 46/90 (51%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
C+ G E +++ D ++ D+V +SM+ + R+G+++ + + E + PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ ILI+ + ++ M +A +M ++G
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISAFCR G E A + + + DV N+++ + + ++ + ++ +L
Sbjct: 464 LISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQ 523
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK-KGHQPEEELCSSLIFHLGK 112
I PD TF+ LI K K + A M DM + G P+ ++LI GK
Sbjct: 524 IQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGK 576
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF + E A +L ++ + K + +S++ A+CR G +E + + ++
Sbjct: 429 LIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHER 488
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD F+ LI F K + A+ M K QP+ ++LI GK + AL
Sbjct: 489 IVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRAL 548
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI----KYFRKEKMYMLA 84
D +N+++ A R D+ + V+ K +L + PD TF+ I K EKM+ L
Sbjct: 633 DAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFEL- 691
Query: 85 YRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ +M +G P + ++++ G+
Sbjct: 692 ---LSEMESRGISPSKVTLNTIVGCCGR 716
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ G E+AK L ++ + D++ N+M+ + GD + V + K+ E+
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF LI K A + M G P+ + SL+ L +E +
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 510
Query: 121 CLQH 124
L H
Sbjct: 511 NLLH 514
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC G + K+L + K +VV + ++ CR G + V+ + E
Sbjct: 109 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 168
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T+ LI K+ A + M +KG +P
Sbjct: 169 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 206
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL--DE 58
++S C+ G +A ++ R K K DVV N+++ C G ++ + + + +E
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ P+ TF++LI KE A + M KKG
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 310
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 33 LNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
+N +L CR G + + ++R++ ++SPD +++ LI K K A +++M
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 93 KKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
G P C++L+ L K EA+ L
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 90
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S R G +EA L R+ D+ N +L +TG + I + K+ E
Sbjct: 517 LMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD +++ ++ + M+ +A + M +M KG + + SS++ +GK+
Sbjct: 577 IMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKV 629
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIK 73
K DVVL+N+++ R G +E + + K+D L +P+ T++ +IK
Sbjct: 332 KPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIK 378
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLD 57
++ AF + G ++ L +D + DV N ++ AY + G +ME+V+ MR +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
PD TF++LI + K++ + +T + + +P +S+I + GK R
Sbjct: 274 ---CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKAR 327
>gi|255569680|ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534892|gb|EEF36579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 182
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC G + A L + + K D V N ++ C+ G + + L
Sbjct: 31 LLDGFCNQGHLDMALALFHEMQKNTLKLDCVAYNIIVDGMCKAGKLNDAKELFSTLPIEG 90
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+ PD T++ILIK F E AY+ +M + G P+ CS + G +R
Sbjct: 91 LQPDVRTYNILIKVFCNEGSLEEAYQVFREMEEGGSLPDG--CSYNVIIQGFLR 142
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +AK+L + + DV N ++ +C G +E V R+++E
Sbjct: 66 IVDGMCKAGKLNDAKELFSTLPIEGLQPDVRTYNILIKVFCNEGSLEEAYQVFREMEEGG 125
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
PD +++++I+ F + A + + +M KG
Sbjct: 126 SLPDGCSYNVIIQGFLRHNDLSGATQLIHEMIDKG 160
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 61/112 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + G +++A ++ + + D + NS++ + + G+++ + + +K+ +
Sbjct: 227 VVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ T++ LIK+ KE +M ++ DM ++G P+ ++ ++I +G+
Sbjct: 287 VRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCMGE 338
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 18/112 (16%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G +EA +L + + + + ++V NS++ +C+ GD H+ + E
Sbjct: 262 IIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQG 321
Query: 61 ISPDYNTFHILI-------------KYF-----RKEKMYMLAYRTMVDMHKK 94
+ PD F +I KYF R K Y Y +VD++ +
Sbjct: 322 LYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQ 373
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ +A+ + G E+ + + EA+ + ++V+LN ++ A+ G + V + E
Sbjct: 402 LANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAMSVYHHIKESG 461
Query: 61 ISPDYNTFHILIKYFRKEKMY---MLAYRTM-VDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+SPD T+ L+K F + K + + Y+ M D + + L +L+F K+R
Sbjct: 462 VSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDRCTPDRKARQMLQVALMFEERKLRFS 521
Query: 117 SEALCLQHVKDIAKDRCAMPFMR 139
+ + + + KD C F R
Sbjct: 522 T----MSSLSNENKDPCVCSFGR 540
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
C+ G + A R E K + +VV N+M+ A+CR +M+ + ++ E + P+
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPN 518
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T+ ILI F K + A+ + M + E + +++I L K+ S+A
Sbjct: 519 NFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKA 573
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDV--VLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+ C+ G +AK++ ++ K +Y + NS++ + + GD +S + R++ E
Sbjct: 560 IINGLCKVGQTSKAKEMLQNL-IKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSE 618
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
ISP+ TF LI F K LA + +M K
Sbjct: 619 NGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSK 654
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ + A ++ + ++K K DV +++ +C+ DM++ + +L EL
Sbjct: 631 LINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELG 690
Query: 61 ISPDYNTFHILIKYFRK 77
+ P+ + ++ LI FR
Sbjct: 691 LMPNVSVYNNLISGFRN 707
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 3/145 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A + G EEA ++ + V+ S++ +C ++ + +++E
Sbjct: 316 VIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEG 375
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD F ++I++F K A M G P L +I G ++A S
Sbjct: 376 LAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMI--QGCLKAESPEA 433
Query: 121 CLQHVKDIAKDRCAMPFM-RKFFIF 144
L+ D + A FM K F+
Sbjct: 434 ALEIFNDSFETWIAHGFMCNKIFLL 458
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G E+A L + + D V ++M+ C++GD+++ +++ + +
Sbjct: 438 LLAALCQLGMMEQAMVLFNEMDMNCG-LDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEG 496
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T+ ILI F K A R + M G P+ + SLI
Sbjct: 497 LAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLI 543
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C+ G + AKQL +D + D V + ++ + + GD+E V++++
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531
Query: 61 ISPDYNTFHILIKYFRKE 78
PD F LIK + E
Sbjct: 532 FVPDVAVFDSLIKGYSAE 549
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C + A +L + +V++ + +L YCR+G + V V ++ L
Sbjct: 156 LIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLG 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD F I K+ A + M ++G +P + LI L K + EAL
Sbjct: 216 VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREAL 275
Query: 121 CLQHVKD 127
L++ D
Sbjct: 276 ALRNEMD 282
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ G E+AK L ++ + D++ N+M+ + GD + V + K+ E+
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF LI K A + M G P+ + SL+ L +E +
Sbjct: 597 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 656
Query: 121 CLQH 124
L H
Sbjct: 657 NLLH 660
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC G + K+L + K +VV + ++ CR G + V+ + E
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD T+ LI K+ A + M +KG +P
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+V ++N +L CR G + + ++R++ ++SPD +++ LI K K A +
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
++M G P C++L+ L K EA+ L
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL--DE 58
++S C+ G +A ++ R K K DVV N+++ C G ++ + + + +E
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ P+ TF++LI KE A + M KKG
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 456
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 50/98 (51%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+++ CRGG + A+ + D DVV N++L AYCR +++ + V+ ++ E +
Sbjct: 19 LASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGV 78
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++ LI + + + A +M + G P+
Sbjct: 79 RPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPD 116
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ G + A L E D++ N++LC +C +E VI ++ K+ +
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
+SP+ + I++ K++ Y+ VD+ K
Sbjct: 583 VSPNAASCTIVVDMLCKDE----KYKKFVDLLPK 612
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EAK+L + +A+ DV+ ++++ +C G + H+ ++ +
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF +LI KE A + + M ++G P +SLI
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A +L + + DVV N M+ +C+ G +++ + K++E
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+PD ++ L+ F + + + M +K P C+ ++ L K
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ C+ C EA +L + ++ K ++ + ++ C+ G +E+ + KL + +
Sbjct: 454 LDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGL 513
Query: 62 SPDYNTFHILIKYFRK-----------EKMY-------MLAYRTMVDMHKKGHQPEE 100
PD T++I+I F K EKM ++AY T++ +G++ EE
Sbjct: 514 QPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEE 570
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A++L +K + D + +++ YC+T ++ +++ ++ ++
Sbjct: 348 LIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVG 407
Query: 61 ISPDYNTFHILIK-YFRKEKM 80
SP+ T+ L+K F+K K+
Sbjct: 408 KSPNVTTYGTLLKGLFQKGKV 428
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 35 SMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
+M+ C+ G +E + ++ + +++++PD TF +LI F + A M M+K
Sbjct: 390 AMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT 449
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEAL 120
G P L S+LI++ KM EAL
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEAL 475
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G EEA QL D DVV + ++ + R G + + +M K+ +
Sbjct: 391 MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ + LI + K A M+ GH + C+ L+
Sbjct: 451 LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLV 497
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/123 (17%), Positives = 57/123 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ F+ A ++ R + D N ++ +C +M+ +++++++
Sbjct: 777 LILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFM 836
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ +T++ L + + A+R + + + G P + +LI + ++ A+
Sbjct: 837 VIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAM 896
Query: 121 CLQ 123
LQ
Sbjct: 897 KLQ 899
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV N +L A C G ++ ++RK++E + P T++ L+ ++ K+ Y A + +
Sbjct: 174 DVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLI 233
Query: 89 VDMHKKG 95
M KG
Sbjct: 234 DCMASKG 240
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C G EEA+++AR F A+ V + N+++C CR G + V +M ++
Sbjct: 221 VVAAMCEDGRVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNG 277
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ ++ +I + LA + M ++G +P SSL+
Sbjct: 278 VDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLM 324
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVIHVMRKLD 57
+I+A C+ G +A+ + D + +VV N+++ YC+ G M V++++
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
E +SP+ TF+ILI F K+ + + +M + P +SLI L +
Sbjct: 289 ENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKIN 348
Query: 118 EALCLQ 123
EA+ ++
Sbjct: 349 EAIGMR 354
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G ++ L + E + DV N ++ CR G++E+ + +L
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD TFHIL++ + A + +M K G +P
Sbjct: 467 L-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKP 503
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G E AK+L K D+V + ++ YC G+ +++++ ++
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNK-GLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMG 500
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
+ P + T++I++K + KE A M K+
Sbjct: 501 LKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKE 534
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G +EA + + + + + N ++ AYC+ G ++ + +++
Sbjct: 372 LINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 61 ISPDYNTFHILI 72
I PD T++ LI
Sbjct: 432 IVPDVGTYNCLI 443
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A L R E ++ DVV N++ +CR D + ++R++ E I+P T+++++
Sbjct: 188 KAASLVRALERRFPP-DVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVIL 246
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
K F + A+ + M K+G + E
Sbjct: 247 KGFFRAGQLQHAWNFFLQMKKRGSKDE 273
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 57/126 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G EA + + + +K DV N++L A+C+ ++ + ++ ++D+
Sbjct: 336 VIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKEL 395
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++++L+K + A M K+G P + +I L + +E
Sbjct: 396 CPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDA 455
Query: 121 CLQHVK 126
C V+
Sbjct: 456 CSYFVR 461
>gi|222623443|gb|EEE57575.1| hypothetical protein OsJ_07927 [Oryza sativa Japonica Group]
Length = 520
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A L R E ++ DVV N++ +CR D + V+R + E I+P T++I++
Sbjct: 237 KAASLVRALEQRFTP-DVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIIL 295
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
K F + A+ + M K+G + E
Sbjct: 296 KGFFRAGQLRHAWDFFLQMKKRGSKDE 322
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +FCR G + +A+QL RD + DVV ++++ A + G + + +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T++ +I F K+ A R + M K P+ S+LI
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A+ L + K DV+ + M+ ++CR+G ++R + E
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD TF LI KE A DM ++G P +S+I
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +A +L + + + D + N+++ AYC+ GD++S + K+ E
Sbjct: 340 ILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T+ LI F K A M M G P
Sbjct: 400 LKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPS 438
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C G EAK++ +D A K DVV +M+ A + G + + + R L E
Sbjct: 247 ILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETG 306
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+PD + +I +K A +M +KG P +SL+ HL K+R
Sbjct: 307 RNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIR 360
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+A + G +A +L R DV + N+++ A C + + V +++ E
Sbjct: 282 MINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKG 341
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T++ L+K+ K + + + +M KG CS G + +S
Sbjct: 342 PSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGS-----CSPNDVTFGYLLKYS--- 393
Query: 121 CLQHVKDI-------AKDRCAM 135
Q KD+ AK++C M
Sbjct: 394 --QRSKDVDAVLERMAKNKCEM 413
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ +C+ G +EA L D V+ N+++ YCR G +E + ++ E
Sbjct: 390 MLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG 449
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE-----EELCSSLIF 108
PD T+ IL+ K + +A +M KG QP+ +C+ LI
Sbjct: 450 CFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G EA++L + + VV ++ CR G++ S RK+ ++
Sbjct: 565 LIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVG 624
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+++LI + +LAY +M ++G P + + LI
Sbjct: 625 IEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLI 671
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +C+ G ++A + RD E + + D + +M+ A D S + + +++DE
Sbjct: 245 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 304
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + F ++I KE Y +M +KG +P + + LI K + +A+
Sbjct: 305 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 364
Query: 121 CLQH 124
L H
Sbjct: 365 RLLH 368
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +C+ G ++A + RD E + + D + +M+ A D S + + +++DE
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + F ++I KE Y +M +KG +P + + LI K + +A+
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 121 CLQH 124
L H
Sbjct: 383 RLLH 386
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I G FE AK++ + DV N ++ A C +G+++ + + L +L
Sbjct: 250 LIEGLLNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNSGEVDFCVDMYYSLRKLG 309
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD N++ ILI K A++ + + + GH+P L + +I + + +A
Sbjct: 310 FCPDINSYKILIPAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQFDDAF 369
Query: 121 CL 122
C
Sbjct: 370 CF 371
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA + + + D + N ++ C G + + ++ +++E
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD TF+++I+ KE A + + +M + P+E + S L+
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+Q+ K + D++ N+++ C G +E + L +
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I + +++ILI + K++ A+R +M KG +P ++LI
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G +EA + ++ E + DV NS++ R G + V + + +
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SPD TF ILI KE A + + M KG +P+
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA L + + K ++ + + +L CR G +E ++ +
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI + M A + + M +KG P+ + +I +L K EA+
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455
Query: 121 CL 122
L
Sbjct: 1456 QL 1457
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EA + + DVV+ +S++ CR G ++ + ++++
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
IS D T++ LI + ++ + M +G P+ + LI L K EA
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA- 1209
Query: 121 CLQHVKDIAKDRCAMP 136
Q + ++ + + P
Sbjct: 1210 --QQILELMRHKGKEP 1223
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S F R +++A+ + D+V NS++ Y R G+ +++ L++
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD +++ +IK F + + A R + +M ++G +P
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP--- 63
RG C++ A+++ + E K D+V N+++ +CR G M+ + ++ ++ E I P
Sbjct: 679 RGECWK-AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 64 DYNTF 68
YNTF
Sbjct: 738 TYNTF 742
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA R G EAK+ + ++ + V N++L + + G + V+++++E +
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ L+ + + A + M KKG P +++I GK EAL
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 121 CL 122
L
Sbjct: 407 KL 408
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 50/118 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G + EA + ++ E D V N ++ AY R G + V+ + +
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ P+ T+ +I + K A + M + G P ++++ LGK +E
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + +G F+EA + R+F+ + DVV ++++ C+ G MES I ++ + E
Sbjct: 500 MIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKG 559
Query: 61 ISPDYNTFHILI 72
I P+ TF+ +I
Sbjct: 560 IKPNVVTFNSII 571
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + + E+A L + + + D V N+++ Y + G+++ I ++++
Sbjct: 395 MMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSG 454
Query: 61 ISPDYNTFHILIKYFRKEKMY------------------MLAYRTMVDMHKKGHQPEEEL 102
I+ D T++ L+ + K MY L Y TM+DM+ KG +E +
Sbjct: 455 INRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAM 514
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +A L RD +++ +V N ++ +C+ GD V+++++E
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T+ ILI F + A + M + G P+ S LI
Sbjct: 404 IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 49/102 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G EA +L + AK + + V+ N+M+ YC+ G + + R+++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ P+ ++ +I+ KE+ A + M G P + +
Sbjct: 509 LPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSI 550
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S FC+ G A ++ ++ E + K + ++ + R +ME I + ++EL
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +T+ +LI F + A R M K +P + + ++++ K + AL
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRAL 498
Query: 121 CL 122
L
Sbjct: 499 RL 500
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR EA ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++IL+ F K+ A + + +M ++G +P + + LI +M +A+
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAI 428
Query: 121 CLQ 123
L+
Sbjct: 429 QLR 431
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR EA +L ++ + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P TF L+ + K A R + M + G P + ++LI L K
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +EA ++ R + + V+ N+++ C+ GD++ I + ++ E +
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ + TF+ L+K R + M A+ M M ++ P+
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G F +L + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
I P+ ++ LI + K LA +M +K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + G E+A +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ K + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E+ ++L K + NS++ YC +M + + + + +
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD NT++ILIK K + A+ +M +KG+ +LI K + EA
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEA 681
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 60/129 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+++ + K + D V +++ YC+ G+M+ V ++ +
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L K +A + +M +KG QP ++++ L K+ + +
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507
Query: 121 CLQHVKDIA 129
L D+A
Sbjct: 508 KLMEEMDLA 516
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E+ +L + + D + +++ AYC+ G+M ++R +
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ F M R + M +KG P +SL+ MRA +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 118 EALCLQHVKDIAKDRCAMP 136
E H DR MP
Sbjct: 613 EIYKAMH------DRGVMP 625
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ C+ G + A +L + K + +V N+++ C+ G++E + +M ++D
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ L+ + K A+ + M K QP
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQP 555
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA+QL R D V+ +++ +C+ G++ + + ++
Sbjct: 318 IILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK 377
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ +I K + A +M KG +P+E ++LI
Sbjct: 378 IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424
Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC+ G A +L + K D+V S++ C++G M + ++
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ LI + K A+ M +KG P
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP 450
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A CR G +EA D +A+ VV N++L + + G+ + V+ ++++
Sbjct: 251 VIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNG 310
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + + A R + M KG P ++++ G + EAL
Sbjct: 311 CQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEAL 370
Query: 121 CL 122
L
Sbjct: 371 AL 372
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ + R G FEEA + +K + N+++ AY G ++ + + ++ +
Sbjct: 321 LAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ NT+++++ K+ + + + +M + G P ++++ GK
Sbjct: 381 FVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK 432
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLD 57
++SA+ R G EEA++L E K D ++ NS++ AY +G DME+++ M K
Sbjct: 355 LLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSS 414
Query: 58 ELAISPDYNTFHILIKYF 75
PD T++ LI+ +
Sbjct: 415 SKQTKPDIGTYNTLIQVY 432
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ N ++ AY ++ ++E ++ E P+ TF +LI +R + A
Sbjct: 103 DLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELF 162
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRC 133
V M K+G+ P C++ + L + + A L +D+ K C
Sbjct: 163 VQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEAL--FRDLEKYEC 205
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 1 MISAFCRGGCFEEAKQL---ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
+++AF R G + EA++ ++F+ K D Y N+++ AY + G + + + +
Sbjct: 250 LMNAFARQGLYREAERYFDKLQEFDYKPDHY---AYNALMEAYSQGGSPAGALEIFQTMQ 306
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD + +ILI + + +Y A + M G P
Sbjct: 307 RNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSP 347
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L ++ + D + ++++ + G E + V + E
Sbjct: 227 LIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERG 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++++I F K+K + AYR + +M +KG +P+
Sbjct: 287 YKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPD 325
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G EEA + D + + K D V N ++ +C+ D E+ ++ ++ E
Sbjct: 262 LISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKG 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD +++++++ +E A DM ++G P+
Sbjct: 322 CKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPD 360
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S R G +EA+ + ++ K + D V NS+L A+ + GD+E V V +L +
Sbjct: 107 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAG 166
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K LA +M G P+ + L+ LGKM SEA
Sbjct: 167 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 225
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKE---KMYML 83
K +V ++++CAY ++G + ++ E + PD + +++ F + + M+
Sbjct: 238 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 297
Query: 84 AYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
YR M+ K G++P++ L L+ L K H E
Sbjct: 298 LYRAMI---KDGYKPDDGLYQVLLAALAKGNEHDE 329
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR EA +L ++ + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P TF L+ + K A R + M + G P + ++LI L K
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +EA ++ R + + V+ N+++ C+ GD++ I + ++ E +
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ + TF+ L+K R + M A+ M M ++ P+
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G F +L + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
I P+ ++ LI + K LA +M +K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + G E+A +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ K + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MISAFCRGGCFEE-AKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++S + + G F+E K L+ E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFRKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R +A+++ E K D+V N+M+ YC+ G M I M + ++
Sbjct: 1264 LIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM K+ +P SSLI
Sbjct: 1324 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1370
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 1159 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1218
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K++M A + +M +K QP+E + ++LI
Sbjct: 1219 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1265
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + + G A + D + K +VV +S++ YC+TGD +S + + A
Sbjct: 1334 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 1393
Query: 61 ISPDYNTFHILI-KYFRKEKMYM--LAYRTMVDMH 92
+SP+ T+ ILI F+K+K+ L + TM+ H
Sbjct: 1394 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1428
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C +A + + A D++ N+++ C G + H +R+
Sbjct: 1089 VIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 1148
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI F M+A +V+M +GH P+ +LI L SEAL
Sbjct: 1149 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1208
Query: 121 CLQ 123
++
Sbjct: 1209 IVR 1211
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1072
Query: 90 DMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
+M K+G P ++ +S+I L R+ ++A+ +
Sbjct: 1073 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVI 1105
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C+ G EE ++L D + +++ N+++ YC+ GDME + +L
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T+ +I F K+ + R +++M+ +G ++ +++I
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 316
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + + A+++ R+ K +VV S++ +CR GD+ + + R++
Sbjct: 560 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG 619
Query: 61 ISPDYNTFHILIKYFRKE 78
+ P+ T+ ILI F KE
Sbjct: 620 LVPNVVTYSILIGSFCKE 637
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 42/84 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K D+V N+++ CR G + ++ + + P+ ++ LI + K+ Y A
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400
Query: 87 TMVDMHKKGHQPEEELCSSLIFHL 110
+++M ++GH+P+ +L+ L
Sbjct: 401 WLIEMTERGHKPDLVTYGALVHGL 424
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
++ F R G +EA++L FE +K +V N+M+ YC+ G M+ + + ++
Sbjct: 490 LVDGFIRNGNLDEARKL---FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 546
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ ++PD T+ +I + K+ A + +M K +P +SLI
Sbjct: 547 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLI 596
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E L + E + K DV + +S++ A+C GD+E+ + ++
Sbjct: 191 LIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRK 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SP+ T+ L++ + + A + DM +G +P+
Sbjct: 251 VSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPD 289
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ CR E+A+ L ++ DVV N ++ + GD++S ++ ++ +
Sbjct: 508 LMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF ILI F K M A M GH P + SL+ G + +
Sbjct: 568 LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKII 627
Query: 121 CLQHV---KDIAKD 131
L H KD+ D
Sbjct: 628 SLLHQMADKDVVLD 641
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVV---LLNSMLCAYCRTGDMESVIHVMRKLD 57
++ R G + EA ++ +D A+ + DVV +L LC R GD V+ +M +
Sbjct: 261 LMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKG 320
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
E P T+++++ KE A+ + M KKG +P+ ++L+
Sbjct: 321 E---EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C+ G EE ++L D + +++ N+++ YC+ GDME + +L
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T+ +I F K+ + R +++M+ +G ++ +++I
Sbjct: 251 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 297
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 42/84 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K D+V N+++ CR G + ++ + + P+ ++ LI + K+ Y A
Sbjct: 322 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381
Query: 87 TMVDMHKKGHQPEEELCSSLIFHL 110
+++M ++GH+P+ +L+ L
Sbjct: 382 WLIEMTERGHKPDLVTYGALVHGL 405
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
++ F R G +EA++L FE +K +V N+M+ YC+ G M+ + + ++
Sbjct: 471 LVDGFIRNGNLDEARKL---FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 527
Query: 58 ELAISPDYNTFHILIKYFRKE 78
+ ++PD T+ +I + K+
Sbjct: 528 KRHLAPDEFTYSTVIDGYVKQ 548
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
C+ G +A +L ++ +++ K DVV N+++ A + +E I V R++ E P+
Sbjct: 195 CKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 254
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
T + +IK ++ AYR + +M KKG QP+
Sbjct: 255 ATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPD 288
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A L R E ++ DVV N++ +CR D + V+R + E I+P T++I++
Sbjct: 183 KAASLVRALEQRFTP-DVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIIL 241
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
K F + A+ + M K+G + E
Sbjct: 242 KGFFRAGQLRHAWDFFLQMKKRGSKDE 268
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 86 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 145
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K++M A + +M +K QP+E + ++LI
Sbjct: 146 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 192
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C +A + + A D++ N+++ C G + H +R+
Sbjct: 16 VIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 75
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI F M+A +V+M +GH P+ +LI L SEAL
Sbjct: 76 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 135
Query: 121 CLQH 124
++
Sbjct: 136 IVRE 139
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R +A+++ E K D+V N+M+ YC+ G M I M + ++
Sbjct: 191 LIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 250
Query: 61 ISPDYNTFHILIKYFRKEK 79
PD T+ +I + K++
Sbjct: 251 CIPDEFTYTTVISGYAKQE 269
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++A+CR G ++A A++ + + +VV NS++ Y GD+E + V+R + E
Sbjct: 231 VVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+S + TF LIK + K+ + A + + +K P++ + LI
Sbjct: 291 GVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLI 338
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G EA+Q+ K D N+++ YCR G ++ + + ++ +
Sbjct: 372 LINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKE 431
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++IL+K + + + M K+G E CS+L+ L K+ EA+
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAM 491
Query: 121 CL 122
L
Sbjct: 492 KL 493
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 40/72 (55%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G +A ++ + + + NS++ YC++G + ++ ++++ +
Sbjct: 337 LIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWS 396
Query: 61 ISPDYNTFHILI 72
+ PD++T++ L+
Sbjct: 397 LKPDHHTYNTLV 408
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G E ++ R + +VV S++ +YC+ G ME V + E
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKK 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + +LI + + A R M + G + +C+SLI
Sbjct: 327 LVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLI 373
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+G F+EA L + +VV+ N+++ C+ D+ + + + +++
Sbjct: 691 LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D T++ LI + A R + DM K+ P ++LI
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 797
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I C+ G A +L + E K D+V N++L C +G+ ++R + +
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I+PD TF LI F K+ A M + P +SLI L
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+V +L A + + VI++ K++ L IS D +F ILI F + + LA +
Sbjct: 615 IVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLG 674
Query: 90 DMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
M K G QP SL+ + EA+ L
Sbjct: 675 KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSL 707
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G A QL E K ++ N ++ CR ++R++ +
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++IL+ F KE +A+ M+ G +P+ ++LI L K+ +A
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G + ++ + +V ++ C G +E ++ +
Sbjct: 586 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 645
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP++ T+ +L+K K A++ + M K G QP + S+L+
Sbjct: 646 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 692
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++A ++ + K +V ++ CR G +E V RK+ +
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 365
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P TF+ LI + KE + A++ + M K +P
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 404
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G +EA ++ E K + D+ N++ C+ E + + E
Sbjct: 396 LINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKG 455
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ +F I+I KE + A R DM KKG +P ++LI
Sbjct: 456 VDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLI 502
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 35/147 (23%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G EA+++ +D + K +K +VV N+++ Y + G ++ + +++ +
Sbjct: 466 MIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIG 525
Query: 61 ISPDYNTFHIL-----------------------------------IKYFRKEKMYMLAY 85
++ D T+ L I KE A+
Sbjct: 526 MTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAF 585
Query: 86 RTMVDMHKKGHQPEEELCSSLIFHLGK 112
R +M G P++ + +SL+ +L K
Sbjct: 586 RLYDEMMAAGLTPDDRVYTSLVANLHK 612
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +FCR G + +A+QL RD + DVV ++++ A + G + + +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T++ +I F K+ A R + M K P+ S+LI
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A+ L + K DV+ + M+ ++CR+G ++R + E
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD TF LI KE A DM ++G P +S+I
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/102 (17%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ + ++ + + + V +++ +C+ GD+++ ++ +
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK-KGHQPEEE 101
++P+Y TF ++ +K A+ + D+ K +GH E+E
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHHLEDE 323
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G EEA +L + + K + DVV+ ++++ +C G ++ + ++ E
Sbjct: 51 LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
ISP+ + LI F K+ ++ A + M ++G QP+
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPD 149
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ E+A++L ++ + + D + N M+ + GD+ S ++ + ++
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLG 111
++PD T+ I K A M G P+ + SLI G
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFG 478
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL--DE 58
+I+ C+ GC +A ++ K + +VV N+++ C G ++ + + L D
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLA---YRTMVDMHKKGH 96
+ PD TF+ +I+ KE A Y TM++ G+
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G + EA + + + DV M+ C+ G + + + E
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+++LI KE A++ M +KG + E ++LI L EA+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 121 CL 122
L
Sbjct: 241 KL 242
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I C G +EA +L + Y + DV+ N+++ C+ G ++ + + + E
Sbjct: 226 LIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ T HILI + K + A +HK G P S +I KM
Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ AK L + + N+++ + C+ +E + +++ E
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +F+I+I K A + DM + G P+ SS I L K+ EA
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEA 451
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G +A + D + K DVV +++L +CR+ D++ + V RK+
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ LI+ F +++ A +M + G P+E ++LI
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G EA ++ ++ VV N+++ +C G M I V+ + E
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ ++ F + A R M KG +P+ SSLI + R EA
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEA 504
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ ++ +L R K + +++ N ++ CR G M+ + V+ ++++
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
S D T++ LIK + KE + A +M + G P +SLI + G M +
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365
Query: 118 EALCLQHVKDI 128
E L V+ +
Sbjct: 366 EFLDQMRVRGL 376
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S FCR +EA ++ R AK K D + +S++ +C + + ++ +
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI + E A + +M +KG P+ S LI L K EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREA 574
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G F +A + + V+ S++ + C+ G+M + ++
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ L+ F ++ AYR + +M G P ++LI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G + A + E K +VV N+++ YC+ ++ ++R +
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ +++++I R+ +M +++ + +M+K+G+ +E ++LI
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISF-VLTEMNKRGYSLDEVTYNTLI 317
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A L R E ++ DVV N++ +CR D + ++R++ E ++P T++I++
Sbjct: 181 KAASLVRALERRFPP-DVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIIL 239
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
K F + A+ + M K+G + E
Sbjct: 240 KGFFRAGQIQHAWNFFLQMKKRGAKDE 266
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G +A+ + R+ + + K DVV N+++ Y +T + V ++ ++
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++ILI A + ++ ++G P + +I K EA
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 121 CL 122
L
Sbjct: 569 IL 570
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G F+EA L K DVV +++L YC+ ME I + KL +
Sbjct: 554 VIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAG 613
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-GKMRAHSEA 119
+ PD ++ LI + A + M ++G P E +L+ L GK +SE
Sbjct: 614 LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSET 673
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I FC+ G EEA +L F + + + + +S L C TGDM + +++ EL +
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLRPN---IFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD + +I + A++ + K G+ P + LI + + S+A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G +A+ + R+ + + K DVV N+++ Y +T + V ++ ++
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++ILI A + ++ ++G P + +I K EA
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 121 CL 122
L
Sbjct: 569 IL 570
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G F+EA L K DVV +++L YC+ ME I + KL +
Sbjct: 554 VIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAG 613
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-GKMRAHSEA 119
+ PD ++ LI + A + M ++G P E +L+ L GK +SE
Sbjct: 614 LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSET 673
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I FC+ G EEA +L F + + + + +S L C TGDM + +++ EL +
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLRPN---IFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD + +I + A++ + K G+ P + LI + + S+A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG +EA +L R+ + D + + AYC D+ S V+ ++
Sbjct: 233 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYN 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T++ ++K K + AY+ + +M ++G P+
Sbjct: 293 LVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPD 331
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G EA++L + + DVV NS+L A C+ G+++ + R++ ++PD ++
Sbjct: 206 GDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSY 265
Query: 69 HILIKYF 75
I I+ +
Sbjct: 266 SIFIRAY 272
>gi|147789026|emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
Length = 993
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ GC +AKQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 715 LIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 774
Query: 61 ISPDYNTFHILIKYF 75
I PD T LI +
Sbjct: 775 IKPDEFTVSALINGY 789
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + I +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD ++ ILI F +E A + M K G +P
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPN 227
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EEA L D +A+ K D +++++ YC GDME + + +
Sbjct: 750 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 809
Query: 61 ISPDYNTFHILIKYF-RKEKM--------YMLAYRTMVDM-HKKGHQPEEELCSSLIFHL 110
I PD+ F L++ K +M ML R+++++ ++ + E E S I L
Sbjct: 810 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 869
Query: 111 GKMRAHSEALCL 122
+ + EA+ +
Sbjct: 870 CEQGSIQEAVTV 881
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G ++A L + K ++ NS++ CR G + + L+++
Sbjct: 645 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 704
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI KE + A + M KG P + +SLI K EAL
Sbjct: 705 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEAL 764
Query: 121 CLQHVKDIAKDRCAMP 136
L + D+ K RC P
Sbjct: 765 NL--LIDL-KARCIKP 777
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G E+A + K ++V +++ +C+ G ++ + + ++ L
Sbjct: 199 LIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLG 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D + LI F + + DM K+G P +S+I L K SEA
Sbjct: 259 IEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEA 317
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G +++A LA D D+V N ++ A CR G+++ I ++ ++ E
Sbjct: 489 LIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKG 548
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ ++++LI K + A +M + P+ ++LI L KM AL
Sbjct: 549 IKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAAL 608
Query: 121 CL---QHVKDIAKD 131
L H +D+ D
Sbjct: 609 NLLEKLHNEDVHAD 622
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L R+ E K +V +L ++CR G +++ ++ + +
Sbjct: 349 LIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+S + ++ +I K++ A R M +M +G++P+ +++I+HL EA
Sbjct: 409 LSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEA 467
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 43/80 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ +A +L+++ + D+V N+++ C+ G M + ++++ KL
Sbjct: 559 LISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNED 618
Query: 61 ISPDYNTFHILIKYFRKEKM 80
+ D T++ILI + K ++
Sbjct: 619 VHADIITYNILISWHCKARL 638
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
++SAF R F +A + R A + +V N +L Y + + V+ ++ +
Sbjct: 184 LVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKND 243
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D T++ LI R+ +Y A + +M G +P++ +SL+ GK R H EA
Sbjct: 244 GIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEA 303
Query: 120 L 120
+
Sbjct: 304 I 304
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + R G E+ + + + ++ + D N+M+ AY R G M+ + ++
Sbjct: 640 LMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSG 699
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++I +K + M+ A + M +G +P E +S++
Sbjct: 700 LIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSIL 746
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS RG ++EA ++ + A + D V NS+L Y + + I V+++++
Sbjct: 255 LISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGG 314
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P T++ LI + K+ + A +M KG QP+ ++LI L +
Sbjct: 315 CPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDR 366
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 52/118 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS++ + G +EA +L + E K + DV+ +++ R G +++ I ++
Sbjct: 325 LISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ T++ LIK + D+ G P+ ++L+ G+ SE
Sbjct: 385 CKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSE 442
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G F+E K+ + + D Y S++ +Y R G + + + +++ E I PD +T+
Sbjct: 445 GVFKEMKK--SGYVPERDTY-----VSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTY 497
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF------HLGKMRAHSEALCL 122
+ ++ + + A + +M +P+E SSL+ L KM+A SE +
Sbjct: 498 NAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYA 557
Query: 123 QHVK 126
+ ++
Sbjct: 558 EKIE 561
>gi|225432159|ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MISAFCRGGCFEE-AKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++S + + G F+E K L+ E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFRKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R +A+++ E K D+V N+M+ YC+ G M I M + ++
Sbjct: 1433 LIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1492
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM K+ +P SSLI
Sbjct: 1493 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1539
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K++M A + +M +K QP+E + ++LI
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1434
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +A + + A D++ N+++ C G + H +R+
Sbjct: 1258 VIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 1317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI F M+A +V+M +GH P+ +LI L SEAL
Sbjct: 1318 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1377
Query: 121 CLQ 123
++
Sbjct: 1378 IVR 1380
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1241
Query: 90 DMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
+M K+G P ++ +S+I L K R+ ++A+ +
Sbjct: 1242 EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVI 1274
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + + G A + D + K +VV +S++ YC+TGD + + + A
Sbjct: 1503 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEA 1562
Query: 61 ISPDYNTFHILI-KYFRKEKMYM--LAYRTMVDMH 92
+SP+ T+ ILI F+K+K+ L + TM+ H
Sbjct: 1563 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1597
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + + G ++ + ++ + DV+ N+++ +C+ G + + R++ +
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSG 233
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ L+ F KE M A + VDM + G P E +SL+ K+ S+A
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAF 293
Query: 121 CL 122
L
Sbjct: 294 RL 295
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G E A L + + + D V NSM+ Y + G ++ ++ ++ ++
Sbjct: 139 MIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ LI F K +M + G +P S+L+
Sbjct: 199 CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLV 245
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G A QL E K ++ N ++ CR ++R++ +
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++IL+ F KE +A+ M+ G +P+ ++LI L K+ +A
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 428
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G + ++ + +V ++ C G +E ++ +
Sbjct: 520 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 579
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP++ T+ +L+K K A++ + M K G QP + S+L+
Sbjct: 580 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++A ++ + K +V ++ CR G +E V RK+ +
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P TF+ LI + KE + A++ + M K +P
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 338
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG +EA +L R+ + D + + AYC D+ S V+ ++
Sbjct: 260 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYN 319
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T++ ++K K + AY+ + +M ++G P+
Sbjct: 320 LVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPD 358
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G EA++L + + DVV NS+L A C+ G+++ + R++ ++PD ++
Sbjct: 233 GDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSY 292
Query: 69 HILIKYF 75
I I+ +
Sbjct: 293 SIFIRAY 299
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ GC +A L D K D+ N+++ YCR ++S I ++ ++
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ L+ K M +KG P +++I L + +EA+
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAV 630
Query: 121 CL 122
L
Sbjct: 631 DL 632
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD-EL 59
+I + C EA L + ++K DVV +++ +C+ GD++ + R ++ +
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+S T++I+I F ++ +A R +M K G P+
Sbjct: 676 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDN 716
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G +A ++ +D K K D S++ +C+ GD + + V +
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ LIK ++ + + A + M +M +KG +P+ + +I L KM S+A
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR + A +L ++ DV+ N++L C+T E V+ + + + E
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P+ T++ +I+ K A + +M KG P+ +LI
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C+ G + A +L + + DVV N+++C CR + + K+
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T++ +I + K+ M + A R + D KG +P+E SL+
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I+ FC+ G + A L R E +YD + N ++ A+ +M+ + + ++ +
Sbjct: 651 LITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKN 710
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ +LI F K Y+ +++ +KG P ++ L EA
Sbjct: 711 GCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEA 770
Query: 120 LCLQHV---KDIAKDRCAMPF 137
+ + H+ KDI D F
Sbjct: 771 VGIIHLMVQKDIVPDTVNTIF 791
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 60/122 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G EA+Q+ K D N+++ YCR G ++ + + ++ +
Sbjct: 157 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 216
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++IL+K + + + M K+G +E CS+L+ L K+ +EA+
Sbjct: 217 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 276
Query: 121 CL 122
L
Sbjct: 277 KL 278
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++A+CR G ++A A++ E+ + +VV NS++ Y GD+E + V+R + E
Sbjct: 16 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 75
Query: 60 AISPDYNTFHILIKYFRKEKM 80
+S + T+ LIK + K+ +
Sbjct: 76 GVSRNVVTYTSLIKGYCKKGL 96
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G E ++ R + +VV S++ YC+ G ME HV L E
Sbjct: 52 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 111
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D + + +L+ + + A R +M + G + +C+SLI
Sbjct: 112 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLI 158
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EEA+ + + K D + ++ YCRTG + + V + E+
Sbjct: 87 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 146
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + + LI + K + A + M+ +P+ ++L+
Sbjct: 147 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 193
>gi|302804296|ref|XP_002983900.1| hypothetical protein SELMODRAFT_119493 [Selaginella moellendorffii]
gi|300148252|gb|EFJ14912.1| hypothetical protein SELMODRAFT_119493 [Selaginella moellendorffii]
Length = 315
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A+ + G F EA L + K DVV N M+ Y +TGD S I R +D
Sbjct: 32 MLGAYTKNGHFHEALLLFQKIPTK----DVVSWNLMIVTYSQTGDFASAIRFFRAMDLDG 87
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF +I+ + +L +H + P+ L ++LI
Sbjct: 88 VHPDNVTFLAVIEACGSQADLLLGRA----IHSEVSHPDILLVNALI 130
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G A QL E K ++ N ++ CR ++R++ +
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ PD T++IL+ F KE +A+ M+ G +P+ ++LI L K+
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 465
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G + ++ + +V ++ C G +E ++ +
Sbjct: 563 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 622
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP++ T+ +L+K K A++ + M K G QP + S+L+
Sbjct: 623 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++A ++ + K +V ++ CR G +E V RK+ +
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 342
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P TF+ LI + KE + A++ + M K +P
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 381
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++A+ ++ +L RD + K D+V N+++ A+C G +S + V ++++E
Sbjct: 134 LLAAYLHSRKYDIVGELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSALSVFQEIEEK 193
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE-EELCSSLIFHLGKMRAHSE 118
+SPD TF+ L+ + + + M K P CS L+ L +++ E
Sbjct: 194 GLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMGVKNVAPGVRSYCSKLV-GLAEVKKMGE 252
Query: 119 ALCL 122
A+ L
Sbjct: 253 AVVL 256
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DEL 59
+IS + + G + A+++ + + V+ LN++L AY + + V + R L +L
Sbjct: 99 LISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHSRKYDIVGELFRDLPTQL 158
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAH 116
+I PD T++ +IK F ++ + A ++ +KG P+ ++L ++ G+
Sbjct: 159 SIKPDLVTYNTIIKAFCEKGSFDSALSVFQEIEEKGLSPDSITFNTLLDGLYSKGRFEEG 218
Query: 117 SEALCLQHVKDIA 129
+ VK++A
Sbjct: 219 EKVWEQMGVKNVA 231
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+A+ G E+A L R + K DV+ N++L + R G ++ ++ ++
Sbjct: 117 MIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMG 176
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK--GHQPEEELCSSL 106
+ P+ +F++LI F++ + A + M G P E L S+
Sbjct: 177 LKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSM 224
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 47/110 (42%)
Query: 24 KYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYML 83
K + + + N M+ AY G +E + ++R + + PD T++ ++ + +
Sbjct: 105 KAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQ 164
Query: 84 AYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRC 133
A+ + +M + G +P + LI + EAL + + D C
Sbjct: 165 AFELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGC 214
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G E+A + E++ + N ++ YC++ ++ + V+ K+ E
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERK 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++ LI + + AYR + M+ +G P++ +S+I L K + EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G F+ A + + K D + + YCR G + +M K+ E
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL-----GKMRA 115
+SPD T+ LIK + A+ + M G +P + SLI HL GK +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 116 HSEALC 121
LC
Sbjct: 728 SEPELC 733
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ R G +E KQ+ + ++ N M+ YC+ G++E + K+ E
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ T+ LI + + K A++ +M KG + E + LI L R EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
L VK KD P +R + +
Sbjct: 309 DL-FVK--MKDDECFPTVRTYTVL 329
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C FE+A++L K +V+ N+++ YC+ G +E + V+ ++
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
+SP+ T++ LIK + K ++
Sbjct: 424 LSPNTRTYNELIKGYCKSNVH 444
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ + L + E K DVV NS++ CR+G+ +S ++ +++
Sbjct: 434 LIKGYCKSNVHKAMGVLNKMLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I K K A + +KG P + ++LI
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G +EA + +K + + N+++ C G ++ + K+ ++
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P +T ILI K+ + AY M G +P+ ++ I
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+ R F +++Q+ R+ K + DV+ N ++ AYCR M+ ++ ++ A PD
Sbjct: 645 YSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPD 704
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC-LQ 123
T++ I + + M++ A + M K+G +P +S++ K++ EA +Q
Sbjct: 705 VVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQ 764
Query: 124 HVKDI 128
++ D+
Sbjct: 765 NLGDL 769
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G FEE K+ F + D + N+++ AY R G + + +++ E +SPD +T+
Sbjct: 446 GVFEEMKR--SRFAPERDTF-----NTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTY 498
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ ++ + ++ + + + +M G +P E SSL+
Sbjct: 499 NAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLL 537
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 12 EEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHIL 71
+EA ++ + E+ + VV NS++ AY R G +E + + RK+ + I PD T+ L
Sbjct: 302 KEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTL 361
Query: 72 IKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ F LA +M K G +P
Sbjct: 362 LSGFVNAGKEELAMEVFEEMRKVGCKPN 389
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA+ RGG E+A L R K K DV ++L + G E + V ++ ++
Sbjct: 326 LVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVG 385
Query: 61 ISPDYNTFHILIKYF 75
P+ TF+ LIK +
Sbjct: 386 CKPNICTFNALIKMY 400
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+CR +EAK++ + + DVV N+ + AY I V+R + +
Sbjct: 676 VIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQG 735
Query: 61 ISPDYNTFHILIKYFRKEKM 80
P++NT++ ++ ++ K K+
Sbjct: 736 CKPNHNTYNSIVDWYCKLKL 755
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 53/121 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S F G E A ++ + K ++ N+++ Y G E ++ V +++
Sbjct: 361 LLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCK 420
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F + M +M + PE + ++LI G+ + +A+
Sbjct: 421 CSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAM 480
Query: 121 C 121
Sbjct: 481 A 481
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A+ L + ++K ++V+ N+ + YCR G M+ + + +++
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+ D T++IL K Y A + M +KG +P
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPN 461
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ +CR G +EA +L E K DV N + C+ + ++ + E +
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV 458
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF + I+ + KE A R DM KKG P ++LI
Sbjct: 459 KPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLI 504
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ + C+ ++EAK + K K +VV + YC+ G++ + R +++
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T++ LI + K++ A++ +M KG P+ SSLI
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLI 539
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAK-YDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I CR G E+AK+L + K K +V N++L AY D + V +++ +++
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKMR 114
+ T+ ILI+++ A + +M +K + + + SS+I LG M+
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMK 339
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G EEA+++ + K + DV + +SM+ R G+M+ + ++ +
Sbjct: 293 LIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRD 352
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
I P+ +T+ LI K A +++M KG
Sbjct: 353 IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG 387
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ C+ GC EA + E +V + NS++ CR+ +E + +L A+
Sbjct: 463 LDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEAL 522
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ I+I K AY ++M +KG P
Sbjct: 523 QPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPN 560
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 9 GCFE-----EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
GCF+ + +L E K K + V N ++ Y + G M++ + +RK++E SP
Sbjct: 361 GCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 420
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
D TF+ LI + K A+R M +M +KG
Sbjct: 421 DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G EA +L + + K ++ N+M+ C +G + I + +L E
Sbjct: 498 LIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG 557
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ +I + +E A++ M KK +P+ C+ L+
Sbjct: 558 LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ +A + D +VV N+++ +C+ G+M+ + + ++ E +
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ILI + K++ + + +M K G +P ++L+ L K + +A
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361
Query: 121 CLQHV 125
L +
Sbjct: 362 NLAQM 366
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ G + A +L + + D+ N M+ CR ++ ++ ++ E
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ ++ K AY + G+ + CS+LI L K R +A
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++EA +L + + VV N ++ C+ ++ IH++ ++
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDG 651
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD T++ + F K + A+R M +G P + S L+ L
Sbjct: 652 CLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A++L R+ E DVV ++ +C+ ++ + ++ +
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
P T+ I+I K + M ++G P+ + +S+I L K ++ EA
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605
>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ GC +AKQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 570 LIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 629
Query: 61 ISPDYNTFHILIKYF 75
I PD T LI +
Sbjct: 630 IKPDEFTVSALINGY 644
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + I +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I+PD ++ ILI F +E A + M K G +P
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKP 226
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EEA L D +A+ K D +++++ YC GDME + + +
Sbjct: 605 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 664
Query: 61 ISPDYNTFHILIKYF-RKEKM--------YMLAYRTMVDM-HKKGHQPEEELCSSLIFHL 110
I PD+ F L++ K +M ML R+++++ ++ + E E S I L
Sbjct: 665 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 724
Query: 111 GKMRAHSEALC-LQHVKDI 128
+ + EA+ L V I
Sbjct: 725 CEQGSIQEAVTVLNEVGSI 743
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G ++A L + K ++ NS++ CR G + + L+++
Sbjct: 500 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 559
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI KE + A + M KG P + +SLI K EAL
Sbjct: 560 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEAL 619
Query: 121 CLQHVKDIAKDRCAMP 136
L + D+ K RC P
Sbjct: 620 NL--LIDL-KARCIKP 632
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G E+A + K ++V +++ +C+ G ++ + + ++ L
Sbjct: 199 LIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLG 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D + LI F + + DM K+G P +S+I L K SEA
Sbjct: 259 IEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEA 317
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A CR G EEA L + + D +++ R G E + + + E I
Sbjct: 867 IRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGI 926
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI-FHLGKMRAHSEAL 120
+P + + LI +F KEK A + M + G +P S+LI ++ RA
Sbjct: 927 NPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWS 986
Query: 121 CLQHVK 126
L H+K
Sbjct: 987 VLNHLK 992
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CRG +A ++ + K + D + ++ Y R D+ I + +++ E
Sbjct: 391 LVKGLCRGDRITDAVEIV-EIMKKRNLIDAKIYGIIINGYLRKKDLSKAIELFQRMKESG 449
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P +T+ L++ Y + +M ++G + + +++ + SEA
Sbjct: 450 IQPITSTYTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEAW 509
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
V + KD+ A P + + IF
Sbjct: 510 ---EVFNTMKDKGANPTWKSYSIF 530
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G AK+L +A K D V ++L + GD++++ +++
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF ILI K A+ T+ M K+G P ++LI L ++ EAL
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 121 CL 122
L
Sbjct: 423 EL 424
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++V N+ L + G +E L + ++PD T++IL++ + K A + +
Sbjct: 471 NIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+M + G PE + +SLI L K EA
Sbjct: 531 SEMEENGCDPEVVIINSLIDTLYKADRVDEA 561
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 1142 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1201
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K++M A + +M +K QP+E + ++LI
Sbjct: 1202 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1248
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C +A + + A D++ N+++ C G + H +R+
Sbjct: 1072 VIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLMTGLCHEGHVRKAEHFLREAIRRE 1131
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI F M+A +V+M +GH P+ +LI L SEAL
Sbjct: 1132 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1191
Query: 121 CLQ 123
++
Sbjct: 1192 IVR 1194
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 996 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1055
Query: 90 DMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
+M K+G P ++ +S+I L R+ ++A+ +
Sbjct: 1056 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVI 1088
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++ C+ +A QL + K DVV NS++ +C G ++ + ++
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD TF IL+ K+ A + M K+G P+ SSL+
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLM 311
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G AK + + DVV +S++ YC ++ HV + L
Sbjct: 275 LVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
++P ++++I+I K KM A +M KG P+ +SLI L K+
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKL 387
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G +EA A D V +++ C+ G+ + + +++K++
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D ++I+I K+K AY+ +M K P+ +SLI + EA
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254
Query: 121 CLQH---VKDIAKD 131
L H +K+I D
Sbjct: 255 GLFHEMVLKNINPD 268
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A QL + D++ NS++ C+ ++ I +++K+ +
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Query: 61 ISPDYNTFHILI 72
I P T++ILI
Sbjct: 440 IQPSMYTYNILI 451
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+A+ G E+A L R + K DV+ N++L + R G ++ ++ ++
Sbjct: 426 MIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMG 485
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK--GHQPEEELCSSL 106
+ P+ +F++LI F++ + A + M G P E L S+
Sbjct: 486 LKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSM 533
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 39/73 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+ G +EAK + + K D++ +++L + R G+++ + + ++ E
Sbjct: 255 LISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERG 314
Query: 61 ISPDYNTFHILIK 73
+ P N+++ +I
Sbjct: 315 LQPTVNSWNGIIS 327
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G ++ A+++ E K + + N M+ AY G +E + ++R + +
Sbjct: 395 VIDMYSKCGSYDYAEKVFXKAENK----NTAMWNEMIAAYVNEGKVEDALGLLRSMQKDG 450
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ ++ + + A + +M + G +P + LI + EAL
Sbjct: 451 WKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEAL 510
Query: 121 CLQHVKDIAKDRC 133
+ + D C
Sbjct: 511 KVFRIMQSPSDGC 523
>gi|87162841|gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G E+A +L D E +Y K+D ++S++ YC+ GDME + K
Sbjct: 808 LLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKD 867
Query: 61 ISPDYNTFHILIK 73
ISPD+ F +I+
Sbjct: 868 ISPDFLGFLYMIR 880
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G +E L R E DVVL + +C Y + V MR++ E
Sbjct: 187 VVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 246
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I D+ ++ ILI F K ++ + M K+G P +
Sbjct: 247 ICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNK 286
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 48/113 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG +A L E K ++V+ NS++ C G + + L++L
Sbjct: 703 VIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLN 762
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ T+ LI +E A M G QP+ ++ +SL+ K+
Sbjct: 763 LMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKI 815
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SAF R G E + +F + ++V +++ A C+ G ++ V ++RK++E
Sbjct: 154 VVSAFSRAGKPELSLWFFDNFMGS--RPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDG 211
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ D + + + + +EK+ + +R M +M +KG
Sbjct: 212 LDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 246
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 31 VLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVD 90
V +++ AYC+ G +E + ++ ++ I D F +LI F + + ++ +V+
Sbjct: 287 VTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVE 346
Query: 91 MHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M K+G P ++++ L K EA
Sbjct: 347 MEKRGIGPNVVTYNAVVNGLSKYGRTQEA 375
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +C+ G EA ++ DF K NS++ C+ G +E I + +LD
Sbjct: 462 MIDGYCKVGKINEALEVFDDFR-KTSISSYACYNSIINGLCKKGMVEMAIEALLELDHKG 520
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ D T +L+K KE + + M +C+ IF L K
Sbjct: 521 LMLDTGTHRLLMKTIFKENSSKVVLDLVCRMESLELDIYNAICNDSIFLLCK 572
>gi|359493285|ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Vitis vinifera]
Length = 993
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ GC +AKQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 715 LIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 774
Query: 61 ISPDYNTFHILIKYF 75
I PD T LI +
Sbjct: 775 IKPDEFTVSALINGY 789
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + I +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD ++ ILI F +E A + M K G +P
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPN 227
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EEA L D +A+ K D +++++ YC GDME + + +
Sbjct: 750 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 809
Query: 61 ISPDYNTFHILIKYF-RKEKM--------YMLAYRTMVDM-HKKGHQPEEELCSSLIFHL 110
I PD+ F L++ K +M ML R+++++ ++ + E E S I L
Sbjct: 810 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 869
Query: 111 GKMRAHSEALC-LQHVKDI 128
+ + EA+ L V I
Sbjct: 870 CEQGSIQEAVTVLNEVGSI 888
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G ++A L + K ++ NS++ CR G + + L+++
Sbjct: 645 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 704
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI KE + A + M KG P + +SLI K EAL
Sbjct: 705 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEAL 764
Query: 121 CLQHVKDIAKDRCAMP 136
L + D+ K RC P
Sbjct: 765 NL--LIDL-KARCIKP 777
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F R G E+A + K ++V +++ +C+ G ++ + + ++ L
Sbjct: 199 LIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLG 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D + LI F + + DM K+G P +S+I L K SEA
Sbjct: 259 IEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEA 317
>gi|255541714|ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549101|gb|EEF50590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 248
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+V N ++ +C ++ ++ ++E + PD T++ LI YF K +A+R M
Sbjct: 44 DIVCYNILIGGFCNKNRLDKAREMLNDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMM 103
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRCA 134
M K G QP SLI EA+ + D A R A
Sbjct: 104 KQMIKDGLQPTVVTYGSLIHAYCLNGNVDEAMKIFKAMDAAASRVA 149
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS F + G + A ++ + + VV S++ AYC G+++ + + + +D A
Sbjct: 86 LISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIHAYCLNGNVDEAMKIFKAMDAAA 145
Query: 61 --ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
++P+ ++ILI + LA M DM KG +P +++ L + + ++
Sbjct: 146 SRVAPNNVIYNILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRERKWLNQ 205
Query: 119 ALCL 122
AL L
Sbjct: 206 ALEL 209
>gi|240254086|ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g16830
gi|332191383|gb|AEE29504.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
CR GC EA Q+ V + + ++ + R+G+ + + + K+ ++ SP+
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
T+ LIK F M A+ + + +G P+ LC+ +I ++ EA
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
>gi|255570183|ref|XP_002526052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534633|gb|EEF36329.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 198
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ E+A++L ++ DV N+M+ + GD++S +++ + ++
Sbjct: 87 LMASLCKESSLEQARKLFQELRKSNCGLDVFSFNTMIDGTLKAGDIQSAKELLKDMLQMG 146
Query: 61 ISPDYNTFHILIKYFRK 77
++P+ T+ ILI +F K
Sbjct: 147 VNPNAFTYFILINWFSK 163
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 57/126 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G EA + + + +K DV N++L A+C+ ++ + ++ ++D+
Sbjct: 343 VIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKEL 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++++L+K + A M K+G P + +I L + +E
Sbjct: 403 CPPDRHSYNMLLKMLIGVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDA 462
Query: 121 CLQHVK 126
C V+
Sbjct: 463 CSYFVR 468
>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
Length = 800
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 595 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 654
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD N +++LI K+ M A + +M +K QP+E + ++LI
Sbjct: 655 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLI 701
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +A + + A D++ N+++ C G + H +R+
Sbjct: 525 VIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 584
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI F M A +++M +GH P+ +LI L SEAL
Sbjct: 585 LNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 644
Query: 121 CLQ 123
++
Sbjct: 645 IVR 647
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
++ C G EE +L EA++ VV N ++ YCR GDM + ++ +++
Sbjct: 420 LVRGLCLEGRVEEGLKL---IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 476
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
P T+ LI K+ ++M K+G P ++ +S+I L K + +
Sbjct: 477 AKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSAT 536
Query: 118 EALCL 122
+A+ +
Sbjct: 537 QAMVI 541
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + ++ S + A C+ GDM+ +V++++ ++
Sbjct: 677 LIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 736
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ P+ TF LIK + + + A + +M G +P+E L+ L
Sbjct: 737 LKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSL 786
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + R+ + + + N ++ + R GD+ +++++ E
Sbjct: 642 LLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDG 701
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +TF I K A + +M G +P + ++LI ++ AL
Sbjct: 702 IPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRAL 761
Query: 121 -CLQHVK 126
C + +K
Sbjct: 762 KCFEEMK 768
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/72 (19%), Positives = 42/72 (58%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + + + A L ++ + K D + ++ ++++ A+C++G+M+ ++R+++E
Sbjct: 327 LISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 386
Query: 61 ISPDYNTFHILI 72
I + +H ++
Sbjct: 387 IDAPIDVYHSMM 398
>gi|413948245|gb|AFW80894.1| hypothetical protein ZEAMMB73_865420 [Zea mays]
Length = 573
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A CRG E A + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 214 LVAALCRGEDAERAYGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQDALHLFDVMPHRR 273
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + IL+ K A R M G +P+ S LI
Sbjct: 274 VPPDLVSHTILMDGLCKAWRLKDARRMFDRMVHGGLRPDAVAYSVLI 320
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 37/76 (48%)
Query: 32 LLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDM 91
+ N ++ +CR + + + V ++ + P+YNT+ LI + + MV+M
Sbjct: 420 MYNMIVDCFCRCDNPKEALDVKVEMTSREVKPNYNTYQTLIICLCRLGKSLSGQSVMVEM 479
Query: 92 HKKGHQPEEELCSSLI 107
+ P E +C++L+
Sbjct: 480 IESDFHPNEAICTALV 495
>gi|357499031|ref|XP_003619804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494819|gb|AES76022.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 344
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+G +A L + AK DV+ ++++ +C G + I + K+
Sbjct: 56 IIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAEN 115
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD TF+I + F KE A + M K G +P
Sbjct: 116 INPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPS 154
>gi|223974389|gb|ACN31382.1| unknown [Zea mays]
Length = 356
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV LN+++ A CR + + + ++ ++ A++PD TF L++ F +E A R
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRCAMPFMRKFFI 143
M + G P + LI KM E + ++ KD + R +I
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGQVEEEAHEEAQEEAQKDEAEIQVGRSRWI 308
>gi|147820978|emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MISAFCRGGCFEE-AKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++S + + G F+E K L+ E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFRKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A L R E ++ DVV N++ +CR D + V+R + E I+P T++I++
Sbjct: 183 KAASLVRALEQRFTP-DVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIIL 241
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
K F + A+ + M K+G + E
Sbjct: 242 KGFFRAGQLRHAWDFFLQMKKRGSKDE 268
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ +A + D +VV N+++ +C+ G+M+ + + ++ E +
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ILI + K++ + + +M K G +P ++L+ L K + +A
Sbjct: 168 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 227
Query: 121 CLQHV 125
L +
Sbjct: 228 NLAQM 232
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ G + A +L + + D+ N M+ CR ++ ++ ++ E
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ ++ K AY + G+ + CS+LI L K R +A
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 366
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +M+++ +
Sbjct: 697 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGG 756
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K + A + M +M G +P + ++LI + +AL
Sbjct: 757 VKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKAL 816
Query: 121 -CLQHVK 126
C Q +K
Sbjct: 817 RCFQEMK 823
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 56/131 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + K D+ S + A C+ GDM +M +++
Sbjct: 732 LIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSG 791
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI + + + A R +M G +P++ + L+ L +EA
Sbjct: 792 VKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAY 851
Query: 121 CLQHVKDIAKD 131
+ I K+
Sbjct: 852 VRPGILSICKE 862
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G E A +A +A+ DVV NS++ CR G++++ ++ +
Sbjct: 180 LVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDG 239
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ + I + + A+ +M +KG P+ S+L+ L K SEA
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAY 299
Query: 121 CL 122
L
Sbjct: 300 AL 301
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G + A+ + + + +VV + YCR ++ + ++
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T L+ K+ + AY +M K G P LI L K + +E+L
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334
Query: 121 CL 122
L
Sbjct: 335 SL 336
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +EAK + R + + V ++ A C+ G+++ V+ +++E +
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
ISP+ TF +I K A M +M ++G P
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EA +L E + K D L N+++ YC I V ++ E
Sbjct: 240 LIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ LI K A + + M +KGH P+E +SL+
Sbjct: 300 VEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLM 346
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG EA++ + A D V+ N++L A C++G++ + + ++ + +
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 61 ISPDYNTFHILIKYF-RKEK 79
I PD T+ LI RK K
Sbjct: 684 ILPDSYTYTSLISGLCRKGK 703
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G FE++ L + E +V N++L YC+ G ++ I ++ +
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T+++LI + Y + DM K+ P E ++LI
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDV----VLLNSMLCAYCRTGDMESVIHVMRKL 56
++ C+ F+ LAR F + + V + M+ C+ G ++ + ++ ++
Sbjct: 414 LLDGLCKNAEFD----LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ I PD T+ LI F K + A + +++ G P + S+LI++ +M
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 117 SEAL 120
EA+
Sbjct: 530 KEAI 533
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEK---MYMLAY 85
D+V N+M+ Y R G +E ++ ++ P+ T++IL+ + K K L Y
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 86 RTMVDMHKKGHQPEEELCSSLIFHL 110
R+++ G P++ C SL+ +
Sbjct: 818 RSII---LNGILPDKLTCHSLVLGI 839
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+C+ G F+ A +L ++K DV N ++ CR+ + ++R + + I P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T++ LI F E ++A + + +M G P ++LI
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
CR GC +EA ++ + D N ++ + C+ G + MR + I P+
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+F LI + + A+ +M K GH P
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G +++ ++ R V N++L + ++G+ SV ++++ +
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL----GKMRAH 116
I PD TF+ILI E + + M M K G+ P + + + H G+ +A
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP-TIVTYNTVLHWYCKKGRFKAA 287
Query: 117 SEALCLQHVKDIAKDRCA 134
E L K + D C
Sbjct: 288 IELLDHMKSKGVDADVCT 305
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR + L RD + + V N+++ + G + ++ ++
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE--------ELCSSLIFHLGK 112
+SP++ TF+ LI E + A + M KG P E LC + F L +
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 113 ---MRAHSEALCLQHV 125
MR +C+ +
Sbjct: 429 GFYMRMKRNGVCVGRI 444
>gi|297828726|ref|XP_002882245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328085|gb|EFH58504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1091
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 44/75 (58%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + +GG EA+++ + + K+ K V ++++ YC+ + + + +++++D
Sbjct: 963 IISGYAKGGMMNEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLKEMDRFG 1022
Query: 61 ISPDYNTFHILIKYF 75
+ P+ + ++ LI+ F
Sbjct: 1023 VQPNADEYNKLIQSF 1037
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR ++AK L D +K + N ++ A +TGD++ V++ ++
Sbjct: 893 VIHSLCRMRNVKDAKSLLLDMISKGPAPGNAVFNLIVHACSKTGDLDEAKEVLKLMESRG 952
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++I + K M A + + KK + +LI K+ + EAL
Sbjct: 953 LKPDVYTYTVIISGYAKGGMMNEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 1012
Query: 121 CL 122
L
Sbjct: 1013 KL 1014
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMR--KLDE 58
++ A + G +EAK++ + E++ K DV ++ Y + G M ++ K
Sbjct: 928 IVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMNEAQEILAEAKKKH 987
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T+H LI+ + K + Y A + + +M + G QP + + LI
Sbjct: 988 KKLSP--VTYHALIRGYCKIEEYDEALKLLKEMDRFGVQPNADEYNKLI 1034
>gi|357449533|ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484091|gb|AES65294.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1070
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + G E+A +L D E +Y K+D ++S++ YC+ GDME + K
Sbjct: 825 LLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKD 884
Query: 61 ISPDYNTFHILIK 73
ISPD+ F +I+
Sbjct: 885 ISPDFLGFLYMIR 897
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G +E L R E DVVL + +C Y + V MR++ E
Sbjct: 204 VVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 263
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I D+ ++ ILI F K ++ + M K+G P +
Sbjct: 264 ICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNK 303
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 48/113 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG +A L E K ++V+ NS++ C G + + L++L
Sbjct: 720 VIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLN 779
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ T+ LI +E A M G QP+ ++ +SL+ K+
Sbjct: 780 LMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKI 832
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SAF R G E + +F + ++V +++ A C+ G ++ V ++RK++E
Sbjct: 171 VVSAFSRAGKPELSLWFFDNFMGS--RPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDG 228
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ D + + + + +EK+ + +R M +M +KG
Sbjct: 229 LDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 263
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 31 VLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVD 90
V +++ AYC+ G +E + ++ ++ I D F +LI F + + ++ +V+
Sbjct: 304 VTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVE 363
Query: 91 MHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M K+G P ++++ L K EA
Sbjct: 364 MEKRGIGPNVVTYNAVVNGLSKYGRTQEA 392
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +C+ G EA ++ DF K NS++ C+ G +E I + +LD
Sbjct: 479 MIDGYCKVGKINEALEVFDDFR-KTSISSYACYNSIINGLCKKGMVEMAIEALLELDHKG 537
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ D T +L+K KE + + M +C+ IF L K
Sbjct: 538 LMLDTGTHRLLMKTIFKENSSKVVLDLVCRMESLELDIYNAICNDSIFLLCK 589
>gi|357451329|ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EA +L E + K D L N+++ YC I V ++ E
Sbjct: 243 LIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKG 302
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ LI K A + + M +KGH P+E +SL+
Sbjct: 303 VEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLM 349
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G EEA +L + EA V N++L C G M+ V ++ ++DE
Sbjct: 295 LIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERK 354
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D+ T + LI + K A + M + G Q + +LI K + EA
Sbjct: 355 VQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEA 413
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA QL + A D V +++ YCR G++E + + +++
Sbjct: 260 LIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATG 319
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +++ ++ + + +M ++ Q + C++LI K R H +
Sbjct: 320 MLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCK-RGHMTSA 378
Query: 121 C 121
C
Sbjct: 379 C 379
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 35/145 (24%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK----- 55
++ C G +E QL + + + + D V N+++ AYC+ G M S V +K
Sbjct: 330 ILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESG 389
Query: 56 --------------------LDEL----------AISPDYNTFHILIKYFRKEKMYMLAY 85
LDE SP+Y+ F L+ F K+
Sbjct: 390 LQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVL 449
Query: 86 RTMVDMHKKGHQPEEELCSSLIFHL 110
++ K+G P++ + SLI L
Sbjct: 450 LIPDELMKRGLPPDKAVYRSLIRRL 474
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS+ + G FEEA+ L ++ + D + N +L AY +ME ++ E
Sbjct: 337 MISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERG 396
Query: 61 ISPDYNTFHILI-KYFRKEKM-YMLAYRTMVDMHKKGHQPEEEL 102
I+P Y T+ +L Y +K++M +L Y K P+E+L
Sbjct: 397 ITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKL 440
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + G E+ + ++ + K DVV N L D+E+ V+ ++ +
Sbjct: 198 MISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAK 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD+ T+ L + K+ + A T+ +M K+ + SSLI
Sbjct: 257 IDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLI 303
>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
Length = 466
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G EA ++ + + K D++ NS++ +C+ GD+ + + K+ E
Sbjct: 223 IIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
+ PD F +I ++ + + R +M +GHQ
Sbjct: 283 LYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQ 319
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +++A ++ R+ D + NS++ + + G++ + V K+ E
Sbjct: 188 VIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEG 247
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD T++ LI++ K A M ++G P+ ++ ++I LG+
Sbjct: 248 VKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGE 299
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G +E+ QL D++ + ++ +C+ G +++ V+ K+ +
Sbjct: 191 MIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+Y + LI K+ A+R M + GH + +C+ LI L + +EA
Sbjct: 251 LAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEA 309
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G A + + E K D + +N++L Y R G ME V + K+ +++P T+
Sbjct: 480 GQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATY 539
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+IL+ + K+K + + M + G P++ C S+I L
Sbjct: 540 NILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGL 581
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG EAK+L D + N++L C+ G + + + ++ +
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFN 425
Query: 61 ISPDYNTFHILIKYF-RKEKM 80
+ PD +T+ I++ RK KM
Sbjct: 426 VLPDSHTYAIILAGLSRKGKM 446
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/113 (20%), Positives = 47/113 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + ++ + + D + LN ++ C T M ++ + L
Sbjct: 577 IILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLG 636
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD NT++ + + ++ + DM ++G P SLI + +M
Sbjct: 637 IIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRM 689
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G F++A +L + ++ + +VV+ +++ C G + + R++ E
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGE-D 94
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ IL+ K AY + +M KKG P ++LI K+ E L
Sbjct: 95 CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVL 154
Query: 121 CLQHVKDIAKDRC 133
L +K++++ C
Sbjct: 155 ML--LKEMSQRGC 165
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA QL + + V N+++ A+C+ ++ + ++ ++ +
Sbjct: 313 VIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQAD 372
Query: 61 ISPDYNTFHILIKYFRKEK 79
P+ T++ +IK F +E+
Sbjct: 373 FKPNVITYNSIIKSFCREQ 391
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G EA ++ E K DVV N++L +CR G ++ +++++
Sbjct: 285 VVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKG 344
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ T++ILI F M+ +A DM G
Sbjct: 345 CLPNVETYNILISGFCDSGMFDMALDMFNDMKTDG 379
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G E A +L D + D + ++ A CR G+ + + + ++ E
Sbjct: 530 LIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKG 589
Query: 61 ISPDYNTFHILIKYFRKEKMYM 82
I+PD +T++ L+ KE +++
Sbjct: 590 ITPDSSTWNSLLIRLSKEIIWL 611
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 46/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G EA +L + N+++ +C G ES + ++ +
Sbjct: 495 LVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRG 554
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T+ LI ++ + A M +KG P+ +SL+ L K
Sbjct: 555 CVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSK 606
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ + A ++ + + K + DV + +++ +CR GDM + ++ +L E+
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
+SP+ + +I FRK + A M +G + ++ ++LI L GK+ S
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS 733
Query: 118 EALCLQHVKDIAKD 131
E K I D
Sbjct: 734 ELYAEMLAKGIMPD 747
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+VV+ +++ YC+ GD++S + + K++E I P+ T+ ++I++ K AY
Sbjct: 328 NVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIY 387
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M K P +SLI K R+ EA
Sbjct: 388 NQMKNKDISPTVFNVNSLIRGYLKARSPEEA 418
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G A QL + + + V+ +SM+ + + +ME+ +H+ +++
Sbjct: 649 LIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEG 708
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I D + LI KE + A +M KG P+ S LI L
Sbjct: 709 IPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G EA + K + VV N+M+ +C+ GDM+S V ++ E
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ +L+ + K+ A+ M + P + C+ +I L K SE+
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + G A +L + AK D++ + ++ C G +E+ ++ +D
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
++P ++ LI KE A+R +M KG P++
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD 818
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
IS CR EA Q + + + + NS++ A+CR G + + + +K+ + +
Sbjct: 532 ISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGL 591
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T +ILI F KE + + +DM+ G P+
Sbjct: 592 IPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPD 629
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G + + D DVV N+++ AYC DM S + M K+
Sbjct: 601 LIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADG 660
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++I + + A + + ++ G P ++L+
Sbjct: 661 CEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLM 707
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ G FE QL + A+ +V + N+++ A + G + MR++ E+
Sbjct: 277 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMG 336
Query: 61 ISPDYNTFHILIKY 74
PD T++ +I +
Sbjct: 337 CGPDITTYNTMINF 350
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G EE ++L +D K VV N ++ YC+ GD++ +++L
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ P T+ LI F K + + + +M +G
Sbjct: 267 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 301
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G F K L + + + DV + +++ + R G+++ I + + +
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKG 511
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P ++ +IK F K A + M H P+E S++I K S AL
Sbjct: 512 VDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSAL 571
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F R G +EA ++ + K +V N+M+ +C+ G M + + K+ +
Sbjct: 487 LMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVH 546
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+PD T+ +I + K+ A + M K +P +SLI
Sbjct: 547 HAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 593
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G EA ++ + + K D++ NS++ +C+ GD+ + + K+ E
Sbjct: 204 IIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEG 263
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
+ PD F +I ++ + + R +M +GHQ
Sbjct: 264 LYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQ 300
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +++A ++ R+ D + NS++ + + G++ + V K+ E
Sbjct: 169 VIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEG 228
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD T++ LI++ K A M ++G P+ ++ ++I LG+
Sbjct: 229 VKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGE 280
>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I++ C+ G E+A+ + D DVV N++L AY R +++ V+ ++ E I
Sbjct: 14 IASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGI 73
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGK 112
SPD T++ LI K + + +M + G +P+ +SL+ F LGK
Sbjct: 74 SPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGK 127
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A + G EEA + D+V N+++ YCR G +E+ ++ +++E
Sbjct: 258 VIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHG 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ D T ILI K A R + +M K G
Sbjct: 318 LECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMG 352
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A L + D V NS++ C G + V ++ K+
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD TF+ILI KE + A + M K+G +P+
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL- 59
+I +C+ +EA L ++ K + NS++ C +G + HV + LDE+
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG---RISHVKKLLDEMH 397
Query: 60 --AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
A PD T++ILI KE + A +V M KKG +P ++ A
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP----------NIVTYNAMM 447
Query: 118 EALCLQHVKDIAKD 131
+ CL++ ++AKD
Sbjct: 448 DGYCLRNNVNVAKD 461
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++L + DV+ N +L A+C+T + I + R++ E
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T H ++ K + +A + + G P + + LI L K + EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 121 CL 122
L
Sbjct: 635 LL 636
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EA+ + + +K D+V N+++ YC ++ + ++ +
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 61 ISPDYNTFHILIKYFRKEKM 80
+ PD +++LI + K KM
Sbjct: 331 LEPDVLNYNVLIDGYCKTKM 350
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EA + K K ++V N+M+ YC ++ + ++ +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++LI + K +M A +M K P+ +SLI + L
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI----------DGL 520
Query: 121 C----LQHVKDIAKDRC 133
C + HV+++ + C
Sbjct: 521 CNLGRIPHVQELLDEMC 537
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G + A ++ +F + + +V +++L C G++ + + K++
Sbjct: 204 LVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGELGRALELFCKMENEG 263
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ PD TF+ILI RK+K A + M KG P +++ L
Sbjct: 264 VCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAGTYQEVLYGL 313
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVIHVMRKLD 57
+IS C+ G +A +A+D VV N+++ Y R G M V ++++++
Sbjct: 194 VISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMN 253
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ ISP+ TF++LI + KE A + +M + G
Sbjct: 254 QAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHG 291
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ A ++ + ++V S++ CR G +E + ++ +++EL
Sbjct: 267 LINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHS 117
++ T + ++ F K+ M + A + M +KG +P ++LI LGKM+ +
Sbjct: 327 LA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEAT 385
Query: 118 EALCLQHVKDIAKD 131
A K I+ D
Sbjct: 386 AAKGAMAGKGISPD 399
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I+ C+ G E A +L + ++ K +V M+ YC+ G + ++ ++ E
Sbjct: 296 LINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 355
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAH 116
++P+ NT+ LI KE + A+ M M ++G QP ++LI L GK++
Sbjct: 356 GLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEA 415
Query: 117 SEALCLQHVKDIAKDRCAMPFM 138
+ L + + + + D+ M
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVM 437
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A L + D V NS++ C G + V ++ K+
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD TF+ILI KE + A + M K+G +P+
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL- 59
+I +C+ +EA L ++ K + NS++ C +G + HV + LDE+
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG---RISHVKKLLDEMH 397
Query: 60 --AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
A PD T++ILI KE + A +V M KKG +P ++ A
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP----------NIVTYNAMM 447
Query: 118 EALCLQHVKDIAKD 131
+ CL++ ++AKD
Sbjct: 448 DGYCLRNNVNVAKD 461
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++L + DV+ N +L A+C+T + I + R++ E
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T H ++ K + +A + + G P + + LI L K + EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 121 CL 122
L
Sbjct: 635 LL 636
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EA+ + + +K D+V N+++ YC ++ + ++ +
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 61 ISPDYNTFHILIKYFRKEKM 80
+ PD +++LI + K KM
Sbjct: 331 LEPDVLNYNVLIDGYCKTKM 350
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G EA + K K ++V N+M+ YC ++ + ++ +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++LI + K +M A +M K P+ +SLI + L
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI----------DGL 520
Query: 121 C----LQHVKDIAKDRC 133
C + HV+++ + C
Sbjct: 521 CNLGRIPHVQELLDEMC 537
>gi|302780409|ref|XP_002971979.1| hypothetical protein SELMODRAFT_59387 [Selaginella moellendorffii]
gi|300160278|gb|EFJ26896.1| hypothetical protein SELMODRAFT_59387 [Selaginella moellendorffii]
Length = 136
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G ++A++L + A DV S++ +C+ M V++++ +
Sbjct: 6 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVNGFCKVKRMVEAHRVLKRMAKGG 65
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T+ LI F + M+AY+ + +M G QP
Sbjct: 66 CQPNVVTYTALIDAFCRAGKPMVAYKLLEEMVGNGVQPN 104
>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I++ C+ G E+A+ + D DVV N++L AY R +++ V+ ++ E I
Sbjct: 14 IASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGI 73
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGK 112
SPD T++ LI K + + +M + G +P+ +SL+ F LGK
Sbjct: 74 SPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGK 127
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A + G EEA + D+V N+++ YCR G +E+ ++ +++E
Sbjct: 258 VIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHG 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ D T ILI K A R + +M K G
Sbjct: 318 LECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMG 352
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG EA++ + A D V+ N++L A C++G++ + + ++ + +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 61 ISPDYNTFHILIKYF-RKEK 79
I PD T+ LI RK K
Sbjct: 644 ILPDSYTYTSLISGLCRKGK 663
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G FE++ L + E +V N++L YC+ G ++ I ++ +
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T+++LI + Y + DM K+ P E ++LI
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDV----VLLNSMLCAYCRTGDMESVIHVMRKL 56
++ C+ F+ LAR F + + V + M+ C+ G ++ + ++ ++
Sbjct: 374 LLDGLCKNAEFD----LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ I PD T+ LI F K + A + +++ G P + S+LI++ +M
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 117 SEAL 120
EA+
Sbjct: 490 KEAI 493
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEK---MYMLAY 85
D+V N+M+ Y R G +E ++ ++ P+ T++IL+ + K K L Y
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 86 RTMVDMHKKGHQPEEELCSSLIFHL 110
R+++ G P++ C SL+ +
Sbjct: 778 RSII---LNGILPDKLTCHSLVLGI 799
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+C+ G F+ A +L ++K DV N ++ CR+ + ++R + + I P+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T++ LI F E ++A + + +M G P ++LI
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
CR GC +EA ++ + D N ++ + C+ G + MR + I P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+F LI + + A+ +M K GH P
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G +++ ++ R V N++L + ++G+ SV ++++ +
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL----GKMRAH 116
I PD TF+ILI E + + M M K G+ P + + + H G+ +A
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP-TIVTYNTVLHWYCKKGRFKAA 247
Query: 117 SEALCLQHVKDIAKDRCA 134
E L K + D C
Sbjct: 248 IELLDHMKSKGVDADVCT 265
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR + L RD + + V N+++ + G + ++ ++
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE--------ELCSSLIFHLGK 112
+SP++ TF+ LI E + A + M KG P E LC + F L +
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 113 ---MRAHSEALCLQHV 125
MR +C+ +
Sbjct: 389 GFYMRMKRNGVCVGRI 404
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G EA+++ R++E+K KYD+ + N +L AY RTG M+ + E P+Y T+
Sbjct: 302 GDIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTW 361
Query: 69 HILIKYFRKEK 79
IL++ + K +
Sbjct: 362 EILMEGWMKSQ 372
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AF R G E+A+++ + + + DV N+++ AY R G + + ++ +
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG 377
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +++IL+ F + ++ A ++ ++G +P ++ H+ + AH+ +
Sbjct: 378 CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP------TMKSHMLLLSAHARS 430
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 60/122 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G EA+Q+ K D N+++ YCR G ++ + + ++ +
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++IL+K + + + M K+G +E CS+L+ L K+ +EA+
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 121 CL 122
L
Sbjct: 492 KL 493
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++A+CR G ++A A++ E+ + +VV NS++ Y GD+E + V+R + E
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 60 AISPDYNTFHILIKYFRKEKM 80
+S + T+ LIK + K+ +
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGL 311
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G E ++ R + +VV S++ YC+ G ME HV L E
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D + + +L+ + + A R +M + G + +C+SLI
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLI 373
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G EEA+ + + K D + ++ YCRTG + + V + E+
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + + LI + K + A + M+ +P+ ++L+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +CR G A+ E + K D + N ++ +C G+ME+ + K+
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++ILI + ++ + + + +M G P +LI L K S+ L
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK---GSKLL 511
Query: 121 CLQHVKDIAKDRCAMPFMR 139
Q VK +DR P +R
Sbjct: 512 EAQIVKRDMEDRGVSPKVR 530
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G E+A+++ AK + V+ N+M+ YCR GD+ + +++
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ ++ LI+ F + A + + M KG P E + LI G R +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG--RKYEFDK 477
Query: 121 CLQHVKDIAKDRCAMP 136
C +K++ +D MP
Sbjct: 478 CFDILKEM-EDNGTMP 492
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+G +A+QL + A+ ++ N+++ YC+ G+ E V ++
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P TF+ L+K K M A + +M G P+
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I G EA+ L + K K DV NS++ Y G+++ I + ++
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 61 ISPDYNTFHILIKYFRKEKM 80
I P T+H+LI KE +
Sbjct: 630 IKPTLKTYHLLISLCTKEGI 649
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 50/111 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+G EA+ + RD E + V + N ++ C G +E +++ +
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLG 111
I + T++ LI A ++++ +KG +P+ +SLI G
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G +A ++ E DV+ N M+ YC+ G++ + + V LD ++
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMS 199
Query: 61 ISPDYNTFHILIK 73
+SPD T++ +++
Sbjct: 200 VSPDVVTYNTILR 212
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ + A + ++ D+V N+ML A C+ G +E + ++ +L
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I K A + + +M K +P+ SSL+ L + EA+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 121 CLQH 124
H
Sbjct: 505 KFFH 508
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A CR +A +L + + DVV N ++ C+ G ++ I + +
Sbjct: 245 LIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T +I+++ +M A + + DM +KG P
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +EA + D + + +V+ N +L + C TG ++ +
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
SP TF+ILI + ++ + A + M K G QP
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP 377
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS +C+ G A + D VV N++L + C +G ++ + V+ ++ +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPD---VVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ ++ A + + +M +G P+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPD 273
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + C G + +A++L D K VV N ++ CR G + I ++ K+ +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ +++ L+ F KEK A + M +G P+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +A +L + AK K D + +S++ R G ++ I + + +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ K + A +V M +G +P E + LI L EAL
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEAL 574
Query: 121 CL 122
L
Sbjct: 575 EL 576
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G ++A ++ + + DV + ++ +CR GDM+S I ++
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SP + LIK + K K + A + M K G P+ C+ ++
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG +EA ++ ++ + DV + ++ +CR G ++ V +++
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSG 345
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ ++ ILI F KE A +M G P+
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPD 384
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I CRG E+A QL + DVV ++++ + + + E + + K+ ++ I
Sbjct: 497 IHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ + T+ ILI F + +AYR M + P++ +SL+
Sbjct: 557 TFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLV 602
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I CR G E A R + +V N+++ C+ G+++ + V+ ++ I
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
SPD T+ ILI F K+ + +M +P SSL FH LC
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSL-FH---------GLC 406
Query: 122 LQHVKDIAKD 131
+ + DI+ D
Sbjct: 407 KKRLSDISLD 416
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR G +A L + + VV S++ YC+ ++ ++ ++
Sbjct: 646 VIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG 705
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD T+++LI R+ A + +M + G P+
Sbjct: 706 ITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G + A + + N ++ A+CR G +E +++M ++
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ +I KE+ A M K+ P + S+LI K +AL
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590
Query: 121 CL 122
L
Sbjct: 591 ML 592
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
C+ + + + RD A KYD + ++ +C GD++S +M ++ ++P
Sbjct: 404 GLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAP 463
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
D + F L+ F K +++ A M + G P C+ +I
Sbjct: 464 DPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 42/80 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ + A L + + K DVV N ++ A+ R G+++ + ++ ++ E
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENG 740
Query: 61 ISPDYNTFHILIKYFRKEKM 80
+ PD+ T+ +L + +K+
Sbjct: 741 VLPDHMTYMMLEWLLKAKKL 760
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G E+A + D + + V N ++ Y + DMES + + R+L
Sbjct: 295 VISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRR 354
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI + + A R +M + QP S +I L K +EAL
Sbjct: 355 CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEAL 414
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAK---YDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
+I C+GG EEA + D E K DKY +L + +C G + I + K+
Sbjct: 436 VIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTIL---IIGHCMKGRIPEAITLFHKMV 492
Query: 58 ELAISPDYNTFHILIKYFRKEKM 80
E PD T + I K M
Sbjct: 493 ETGCRPDKITVNSFISCVLKAGM 515
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G F+EAK+ + K D V+ ++ + YC G I V+R +++ +
Sbjct: 518 LMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRS 577
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P ++++LI F++++ + M +M +KG +SLI
Sbjct: 578 CNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLI 624
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G + +++ + DVV S+L AYC G+ + ++ ++ +
Sbjct: 355 IVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKG 414
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+P+ T+++L++ K R + M +KG+ + C+ +I L
Sbjct: 415 CAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGL 464
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AF R G E+A+++ + + + DV N+++ AY R G + + ++ +
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG 377
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +++IL+ F + ++ A ++ ++G +P ++ H+ + AH+ +
Sbjct: 378 CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP------TMKSHMLLLSAHARS 430
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 51/108 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G EA D AK D V +++ C+TG+ + + V+RK+D L
Sbjct: 140 LIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLL 199
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
+ P+ ++ +I K+K+ + A +M K P+ ++LI+
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIY 247
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +A L + + DV+ +S+L A C+ ++ I ++ K+ +
Sbjct: 385 LIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ K A D+ KG+ + ++ + ++ L K EAL
Sbjct: 445 IQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEAL 504
Query: 121 CL 122
L
Sbjct: 505 SL 506
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 48/119 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G ++A+ + + ++V NS++ Y V +
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ I+I K KM A +MH K P +SLI L K S+A
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDA 398
>gi|242039157|ref|XP_002466973.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
gi|241920827|gb|EER93971.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
Length = 504
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS++ G FEEA++ D + +V NSM+ C G+ + +++ +D
Sbjct: 395 MISSYVAAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSHG 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P+++ + L+ R A + M KGH
Sbjct: 455 CTPNFSVYSSLVSRLRSAGKDTQANNVIKYMTDKGH 490
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G +EAK + + D N+++ A +E + + R+L
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI K L R +M G P+E + LI HL M AL
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462
Query: 121 CL 122
L
Sbjct: 463 DL 464
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV LN+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 196 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVK 255
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P + LI KM +AL
Sbjct: 256 AKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL 287
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G A L + E+ V N+++ A C+ +E V ++D
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
IS TF+ LI K K A + M K+G QP +S++ H K
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK 559
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G EAK+ D + K + + ++++ YC+ G + + R + E
Sbjct: 408 LISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERG 467
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D + ILI +E + + +MH G +P+ + +++I K EA
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAF 527
Query: 121 CLQHVKDIAKDRCAMP 136
L DI D +P
Sbjct: 528 GLW---DIMVDEGCLP 540
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FCR G + A ++ V NS++ YC+ G+ + + ++ +
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T+ LI + E + A++ +M KG P +++I L + +EA+
Sbjct: 293 LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAI 352
Query: 121 CL 122
L
Sbjct: 353 RL 354
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C G + +A ++ + AK + +++ CR M I + ++ E
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++++I+ + A+ + +M KG P+ LI L + SEA
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEA- 421
Query: 121 CLQHVKDIAKD 131
+ V D+ KD
Sbjct: 422 -KEFVDDLHKD 431
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 41/100 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G AK + K VV S++ YC G+ V ++
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
ISP+ TF +I + M A R +M ++ P E
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSE 367
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG EA++ + A D V+ N++L A C++G++ + + ++ + +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 61 ISPDYNTFHILIKYF-RKEK 79
I PD T+ LI RK K
Sbjct: 644 ILPDSYTYTSLISGLCRKGK 663
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G FE++ L + E +V N++L YC+ G ++ I ++ +
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D T+++LI + Y + DM K+ P E ++LI
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDV----VLLNSMLCAYCRTGDMESVIHVMRKL 56
++ C+ F+ LAR F + + V + M+ C+ G ++ + ++ ++
Sbjct: 374 LLDGLCKNAEFD----LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ I PD T+ LI F K + A + +++ G P + S+LI++ +M
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 117 SEAL 120
EA+
Sbjct: 490 KEAI 493
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEK---MYMLAY 85
D+V N+M+ Y R G +E ++ ++ P+ T++IL+ + K K L Y
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 86 RTMVDMHKKGHQPEEELCSSLIFHL 110
R+++ G P++ C SL+ +
Sbjct: 778 RSII---LNGILPDKLTCHSLVLGI 799
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
CR GC +EA ++ + D N ++ + C+ G + MR + I P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+F LI + + A+ +M K GH P
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
+C+ G F+ A +L ++K DV N ++ CR+ + ++R + + I P+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
T++ LI F E ++A + + +M G P ++LI
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G +++ ++ R V N++L + ++G+ SV ++++ +
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL----GKMRAH 116
I PD TF+ILI E + + M M K G+ P + + + H G+ +A
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP-TIVTYNTVLHWYCKKGRFKAA 247
Query: 117 SEALCLQHVKDIAKDRCA 134
E L K + D C
Sbjct: 248 IELLDHMKSKGVDADVCT 265
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR + L RD + + V N+++ + G + ++ ++
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE--------ELCSSLIFHLGK 112
+SP++ TF+ LI E + A + M KG P E LC + F L +
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 113 ---MRAHSEALCLQHV 125
MR +C+ +
Sbjct: 389 GFYMRMKRNGVCVGRI 404
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ + + G ++E + D E + D V NS++ Y + G ++ V +++ +
Sbjct: 205 LLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P T+ LI + K M+ A+ +D + G + + L SS I L K
Sbjct: 265 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAK 316
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + ++EA +L ++ + D V N++L Y +TG + + V ++ L
Sbjct: 170 LMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLG 229
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D T++ LI Y ++ ++ M+A+ DM +G P S+LI K H +A
Sbjct: 230 IEKDTVTYNSLINGYGKQGRLDMVAFLVQ-DMRAQGVAPSVLTYSTLIDIYSKAGMHGDA 288
Query: 120 L 120
Sbjct: 289 F 289
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +A + DF+ K DVVL +S + + G +E + ++ ++ ++
Sbjct: 275 LIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMG 334
Query: 61 ISPDYNTFHILIKYFRKEKM 80
I P+ T++ +I F K K+
Sbjct: 335 IKPNVVTYNTIIDAFGKSKI 354
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A R G E+A+ + + D+ N+ + A C+ G+ME V+ ++
Sbjct: 100 LLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANN 159
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I P+ T+ L+ F K + Y A + M G Q
Sbjct: 160 IKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQ 196
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 50/100 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +A +L R ++ Y K ++V+ N ++ A C++G+++ + +L +
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ P+ + +I KE + A +M G P+E
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ + A ++ D + K + D+ + +++ +C+ DME+ KL E+
Sbjct: 612 LINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVG 671
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK-------M 113
++P+ ++I+I +R A +M + ++ +SLI L K +
Sbjct: 672 LTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFAL 731
Query: 114 RAHSEALCLQHVKDI 128
+SE LC V DI
Sbjct: 732 DLYSEMLCRGIVPDI 746
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EA+ F + + N ++ Y + G ++S V R++
Sbjct: 542 IINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSE 601
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISP+ T+ LI F K LA + DM +KG + + + ++LI KM+ A
Sbjct: 602 ISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENA 660
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A R G F EA +L + +V + S++ YC GD+ S + + ++ E+
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+ F +LI++ K A M G QP
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQP 395
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +E+ L + + + DV+ N+++ +C+ M H + ++
Sbjct: 293 LIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSG 352
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T+ LI KE M A + ++DM + G P E +SLI
Sbjct: 353 LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLI 399
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G AK L + D+V NS++ Y + G ++ + ++ ++
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI F K + A+ + +M G +P S+LI +AL
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLI----------DAL 367
Query: 121 CLQHV 125
C +H+
Sbjct: 368 CKEHM 372
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ E AK+L + + K D + +++ + D + +++ ++ EL
Sbjct: 609 LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELG 668
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGK----M 113
+ D + + L+ + + A + +M KG P+E LC L+ + LG +
Sbjct: 669 MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAI 728
Query: 114 RAHSEALCLQHVKDIAKDRCAMP 136
H E L + ++ +++ MP
Sbjct: 729 ELHDELLKKVPLDELLEEQNLMP 751
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+ + G E + + K K D V N ++ +C D ES V+ ++ E
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE--------EELCSSLIFH 109
+ PD ++++++ F + K + A DM ++G P+ + LC L F
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFE 380
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQLARD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I A C+ G A +L + +E K K D + ++++ + + G V ++ ++ E
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKI-KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK 287
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+++LI F E A R + +M +KG +P+
Sbjct: 288 GCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+GG EA ++ R+ + K D + + AYC D+ V+ ++
Sbjct: 254 LLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYD 313
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T++ +IK K++ AY+ + ++ ++ QP+
Sbjct: 314 LVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPD 352
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV+ NS+L A+C+ G + + R++ I PD TF I I+ + + LAYR +
Sbjct: 247 DVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVL 306
Query: 89 VDMHK 93
+M +
Sbjct: 307 DEMKR 311
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ EEA QL + + + D N++L +C ++ S ++ ++ +
Sbjct: 324 MIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDN 383
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++++L+K + + A M +KG P S ++ L K + E
Sbjct: 384 CLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEA 443
Query: 121 C 121
C
Sbjct: 444 C 444
>gi|413921612|gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G E+AK A + DV NS+ A C GD++ + ++
Sbjct: 255 LVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRG 314
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R + GH+P L +++I L K ++A
Sbjct: 315 LCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADAF 374
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR G A + +D K D++ N+++ YC + ++ V ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++IL+ ++ A + M ++G P L+ GK+ E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 121 CL 122
L
Sbjct: 667 KL 668
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMES-VIHVMRKLDEL 59
M+ F + G +A +A++ K +DVV N ++ + G ES H + +L
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQL 430
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
++PD TF+ +I + KE A + + +M G +P C+ L+ L
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ C E+A + + K DVV ++ C++G +E V R+++E+
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 61 ISPDYNTFHILIKYFRKE 78
+ P+ ++ LI KE
Sbjct: 153 VVPNRFSYATLIDSLFKE 170
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 40/79 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G A +L + + D+V N+++ +C+ GD+ + +M ++ +
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 61 ISPDYNTFHILIKYFRKEK 79
+ P+ T+ LI + K +
Sbjct: 83 LEPNVITYTTLIDAYCKSQ 101
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR G A + +D K D++ N+++ YC + ++ V ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++IL+ ++ A + M ++G P L+ GK+ E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 121 CL 122
L
Sbjct: 667 KL 668
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMES-VIHVMRKLDEL 59
M+ F + G +A +A++ K +DVV N ++ + G ES H + +L
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQL 430
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
++PD TF+ +I + KE A + + +M G +P C+ L+ L
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ C E+A + + K DVV ++ C++G +E V R+++E+
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 61 ISPDYNTFHILIKYFRKE 78
+ P+ ++ LI KE
Sbjct: 153 VVPNRFSYATLIDSLFKE 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 40/79 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G A +L + + D+V N+++ +C+ GD+ + +M ++ +
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 61 ISPDYNTFHILIKYFRKEK 79
+ P+ T+ LI + K +
Sbjct: 83 LEPNVITYTTLIDAYCKSQ 101
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G +L R+ + K D+V N++ CR D+++ ++ ++
Sbjct: 355 LIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG 414
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD T+ LI F KE +A +M +G +E ++LI L K
Sbjct: 415 LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G + A ++ ++ + D V +++ ++G ++ ++ E
Sbjct: 425 LIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAG 484
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ ++I F K ++ + +M KG +P
Sbjct: 485 LEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKP 522
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 38/72 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ + +L ++ + K K VV N ++ +C G M++ ++ + +
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554
Query: 61 ISPDYNTFHILI 72
+ PD T++IL+
Sbjct: 555 VCPDDITYNILL 566
>gi|334185040|ref|NP_186914.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546752|sp|P0C896.1|PP209_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g02650, mitochondrial; Flags: Precursor
gi|332640323|gb|AEE73844.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 44/75 (58%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + +GG +EA+++ + + K+ K V ++++ YC+ + + + ++ ++D
Sbjct: 448 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG 507
Query: 61 ISPDYNTFHILIKYF 75
+ P+ + ++ LI+ F
Sbjct: 508 VQPNADEYNKLIQSF 522
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR ++AK L D +K + N ++ A +TGD++ V++ ++
Sbjct: 378 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++I + K M A + + KK + +LI K+ + EAL
Sbjct: 438 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 497
Query: 121 CLQHVKD 127
L + D
Sbjct: 498 KLLNEMD 504
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMR--KLDE 58
++ A + G +EAK++ + E++ K DV ++ Y + G M+ ++ K
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T+H LI+ + K + Y A + + +M + G QP + + LI
Sbjct: 473 KKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S++ + G EA++L R+ E K D + NS+L AY +G ++ + ++ +
Sbjct: 343 LLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSV 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD +T + LI + + A + KG P+ +SL+
Sbjct: 403 AKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLM 449
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA+ G +E + L + K D+ LN+++ AY + G +E V L+
Sbjct: 378 LLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKG 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD ++ L+ + + K++ M K G P+
Sbjct: 438 LTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPD 476
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G EAK+L ++ E K VV S++ C++ D++S I ++ ++
Sbjct: 197 LINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKG 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I P+ T+ L+ K A + M + H P S+L+ L GK++
Sbjct: 257 IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAV 316
Query: 118 EAL 120
E L
Sbjct: 317 EIL 319
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EAK + + + D+V+ N++L Y + G M ++ ++ ++
Sbjct: 275 LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ +F ILI+ F K + A R +M G + + ++LI
Sbjct: 335 CGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 381
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EA L D +++ ++ S+L +CR G + HV+ ++ E
Sbjct: 241 LLDALCKNGSVKEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG 299
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+ + + A+ + +M K P + LI K EA+
Sbjct: 300 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 359
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A+ + G +E A +L R K +V+ NS++ A R G+ E + ++++L E A+
Sbjct: 572 IDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAV 631
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+PD ++++ I K + A + +M +G P+
Sbjct: 632 APDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPD 669
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A G +E A L R+ + D + NS + A R G E VI ++R++ + +
Sbjct: 187 IEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGL 246
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+PD T++ +I KE + A + +M KG PE
Sbjct: 247 TPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPE 284
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 44/91 (48%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G ++E +L R A+ +V+ NS + + G E + ++ K+ ELA++PD T+
Sbjct: 474 GRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITY 533
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ I K + A + +M +G P+
Sbjct: 534 NSAIAACSKRGRWKEAVALLREMPGQGLTPD 564
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 19 RDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYF 75
RD +D+ DVV ++++ AY R G ++ + ++ + + P+ +++ +I F
Sbjct: 166 RDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGF 225
Query: 76 RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+Y A +DMH +G +P+ SS++ +G +
Sbjct: 226 NHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR G A + +D K D++ N+++ YC + ++ V ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++IL+ ++ A + M ++G P L+ GK+ E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 121 CL 122
L
Sbjct: 667 KL 668
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMES-VIHVMRKLDEL 59
M+ F + G +A +A++ K +DVV N ++ + G ES H + +L
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQL 430
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
++PD TF+ +I + KE A + + +M G +P C+ L+ L
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ C E+A + + K DVV ++ C++G +E V R+++E+
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 61 ISPDYNTFHILIKYFRKE 78
+ P+ ++ LI KE
Sbjct: 153 VVPNRFSYATLIDSLFKE 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 40/79 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G A +L + + D+V N+++ +C+ GD+ + +M ++ +
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 61 ISPDYNTFHILIKYFRKEK 79
+ P+ T+ LI + K +
Sbjct: 83 LEPNVITYTTLIDAYCKSQ 101
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EAK + + + D+V+ N++L Y + G M ++ ++ ++
Sbjct: 252 LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN 311
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ +F ILI+ F K + A R +M G + + ++LI
Sbjct: 312 CGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 358
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EA L D +++ ++ S+L +CR G + HV+ ++ E
Sbjct: 218 LLDALCKNGSVKEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG 276
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+ + + A+ + +M K P + LI K EA+
Sbjct: 277 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 336
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G ++EAK+L D E K V ++ +TG+++ + ++ ++ +
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++IL+ Y KE AY+ +V M G P
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPN 360
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + + G +E+A L + K + VV NS L CR G+M++ + + + + E
Sbjct: 192 MIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKG 251
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ T+ +L++ + Y A + M DM G + L+ HLGK
Sbjct: 252 HHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGK 303
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 54/121 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ + G +E + L + + + K DVV N ++ C+ G + V+ K+
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ ++I + + A + + M GH P + +SL+ L K + + +
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYV 416
Query: 121 C 121
C
Sbjct: 417 C 417
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ E A ++ + + ++V ++L Y GDMES V+ ++ +
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ + K + A M DM K +P E +I L K + EA
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA- 315
Query: 121 CLQHVKDIAKDRCAMP 136
+++ D +R MP
Sbjct: 316 --RNMFDEMLERSFMP 329
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + G E AK++ + + D ++ YC+ G VM +++
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ ++I+ KEK A +M ++ P+ LC +I +AL
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI----------DAL 341
Query: 121 CLQHVKDIA 129
C H D A
Sbjct: 342 CEDHKVDEA 350
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 9 GCFE-----EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
GCFE + +L + E K K + V N ++ Y + G M++ + +RK++E SP
Sbjct: 197 GCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 256
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
D TF+ L + K A+R M +M +KG
Sbjct: 257 DCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI CR G +++ + D N+++ YCR G ++ H K+ + +
Sbjct: 365 MIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKS 424
Query: 61 ISPDYNTFHILIKYFRKEKM 80
PD T +IL++ E M
Sbjct: 425 FKPDLFTCNILVRGLCTEGM 444
>gi|356558306|ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Glycine max]
Length = 1064
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G E L + E + DVVL ++ C Y + V MR++ E
Sbjct: 201 LVGALCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEERVLGEVFGRMREMVEKG 260
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D+ ++ +L+ F K ++ + M K+GH+P + S+++ K EA
Sbjct: 261 IGHDFVSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAF 320
Query: 121 CL-QHVKDIAKD 131
+ + +KD+ D
Sbjct: 321 GVFESMKDLGID 332
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG +A L E K ++V+ NS++ C G + ++ +++L
Sbjct: 716 VIDGLCKGGYLNKALDLCAFVEKKGMNLNIVIYNSIINGLCHEGRLIEAFRLLDSIEKLN 775
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P T+ +I +E + A M KG QP+ ++ +SL+ + K
Sbjct: 776 LVPSEITYATVIYALCREGFLLDAEHVFSKMVLKGFQPKVQVYNSLLDGISK 827
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + G E+A +L D E KY + D + +++++ YC+ GDM + K
Sbjct: 821 LLDGISKFGQLEKAFELLNDMETKYIEPDSLTISAVINCYCQKGDMHGALEFYYKFKRKD 880
Query: 61 ISPDYNTFHILIK 73
+SPD+ F LI+
Sbjct: 881 MSPDFFGFLYLIR 893
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +C+ G EEA ++ +F K + NS++ C+ G E I + +L+
Sbjct: 476 MIDGYCKVGRIEEALEVFDEFR-KTLISSLACYNSIINGLCKNGMTEMAIEALLELNHEG 534
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ D TF +L K +E A + M G +C+ IF L
Sbjct: 535 LELDIGTFRMLTKTIFEENNTKKALDLVYRMEGLGPDIYSSVCNDSIFLL 584
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G E++ + + + V ++++ AYC+ G +E V + +L
Sbjct: 271 LVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVFESMKDLG 330
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D F ILI F + + + +M + G P ++++ L K SEA
Sbjct: 331 IDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLSKHGRTSEAD 390
Query: 121 CLQHVKDIAKD 131
L +K++A D
Sbjct: 391 EL--LKNVAAD 399
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+G +EA L R+ K + V NS++ C++G + S + +M++L
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK-MRAHSEA 119
D T+ L+ K + A + M ++G QP + ++LI L K R +
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537
Query: 120 LCLQHV 125
QH+
Sbjct: 538 KLFQHI 543
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ EA + ++ DV+ ++++C +C G + ++ ++
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+PD T+ ILI KE A + M K+G +P S+L+
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLM 384
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G +EAK L + K +VV ++++ YC G++ + + + +
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P +++I+I K K A + +M K P +SLI L K + AL
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467
Query: 121 CL 122
L
Sbjct: 468 DL 469
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+G + A++L + K DV N M+ C+ G ++ + + K+++
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
PD TF I+I+ ++ A + + +M KG
Sbjct: 583 CIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +++ A+ + + V ++L C+ G+ I ++R +++ +
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS 267
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD ++ +I K+K+ AY +M+ +G P+ S+LI
Sbjct: 268 TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G ++A++L + A DV S++ +C+ G M V++++ +
Sbjct: 398 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ T+ LI F + +AY+ + +M G QP SLI
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ + A+ L D + DVV ++++ YC G ++ ++ ++
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPD T+ L+ F K + A R + M K+G QP ++LI
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A+++ + + + +VV NS++ +C T ++S + +M ++
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ LI K A R DM K P+ S LI
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 364
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+G +EA+Q+ E + +V+ +S++ C+TG + V +++
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ T++ LI F A M +M G P+ ++LI L K EA
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 341
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA +L D +AK+ DV+ + ++ +C+ ++ + + + A
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF L++ + + A R + +M P+ +SL+ K+ EA
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA- 446
Query: 121 CLQHVKDIAKDRC 133
+ +K +AK C
Sbjct: 447 -RRVLKRMAKRGC 458
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 50/100 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ A L ++ + +VV ++++ +CR +++ + R++ E
Sbjct: 48 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 107
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
P+ T++ L+ + + AY + +M ++G QP++
Sbjct: 108 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDK 147
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A ++ D DVV ++++ C+TG ++ + K+ E +
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD TF L+ K A + + M + P SSLI L K
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR + A +L R ++V N++L CR G M+ ++ ++ E
Sbjct: 83 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 142
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD ++ L+ K +A + D P+ S+LI L K EA
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEA 201
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFCR G A +L + + +V+ S++ +C TGD+E ++ +L+
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLER-- 525
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD 90
D N K M AYR M+D
Sbjct: 526 ---DENC-----------KADMFAYRVMMD 541
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S CR G +EA +L + + + D ++++ C+TG ++ + V
Sbjct: 118 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 177
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + LI K A + M + +P+ ++L+ L K EA
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA- 236
Query: 121 CLQHVKDIAKDRCAMP 136
Q V + +DR P
Sbjct: 237 --QQVLETMEDRNCTP 250
>gi|255606928|ref|XP_002538650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223511145|gb|EEF23733.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 248
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 42/74 (56%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+++ C+ E+A++L ++ DV+ N+M+ + GD++S +++ + ++ +
Sbjct: 58 LASLCKESSLEQARKLFQELRKSNCGLDVISFNTMIDGTLKAGDIQSAKELLKDMLQMGL 117
Query: 62 SPDYNTFHILIKYF 75
+PD T+ ILI F
Sbjct: 118 NPDAFTYSILINRF 131
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + + G E+ + L +++E+ + YD + N++L +C+ G +E ++R + E
Sbjct: 319 MLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEG 378
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTM-----VDMHKKGHQPEEELCSSLIFHLGKMR 114
+P N++ I+ + +++ A+ M V KG +P+ ++ SS++ LG R
Sbjct: 379 KTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNR 437
>gi|6957728|gb|AAF32472.1| hypothetical protein [Arabidopsis thaliana]
Length = 1077
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 44/75 (58%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS + +GG +EA+++ + + K+ K V ++++ YC+ + + + ++ ++D
Sbjct: 949 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG 1008
Query: 61 ISPDYNTFHILIKYF 75
+ P+ + ++ LI+ F
Sbjct: 1009 VQPNADEYNKLIQSF 1023
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + CR ++AK L D +K + N ++ A +TGD++ V++ ++
Sbjct: 879 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 938
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++I + K M A + + KK + +LI K+ + EAL
Sbjct: 939 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 998
Query: 121 CLQHVKD 127
L + D
Sbjct: 999 KLLNEMD 1005
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMR--KLDE 58
++ A + G +EAK++ + E++ K DV ++ Y + G M+ ++ K
Sbjct: 914 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 973
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP T+H LI+ + K + Y A + + +M + G QP + + LI
Sbjct: 974 KKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 1020
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVIHVMRKLDEL 59
M++AFC G +A ++ + VV N+++ AYCR G +E+ + + R++++
Sbjct: 209 MLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGLENALELKRRMEKE 268
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDM 91
+PD T++ +I KE+ A + +++M
Sbjct: 269 GCAPDAVTYNTIIHGLCKERQMRQANQLLIEM 300
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
+ D+V N+++ CR G ++ H++++LD+ + P+ +TF LI K + A +
Sbjct: 341 QLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSERALQ 400
Query: 87 TMVDMHKKGHQPE 99
+ M K G P
Sbjct: 401 LLNVMKKSGFHPN 413
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 54/114 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G +E++ L ++ + + + + +++ + +T + E + ++ + +
Sbjct: 350 LILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSERALQLLNVMKKSG 409
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
P+Y+TF I++ F K K + A M D+ + P++ L L K +
Sbjct: 410 FHPNYDTFKIVVSTFCKNKDFEGAVDVMKDILGRCMAPDKALLHEFFDGLSKAK 463
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ A +L A+ DV+ S L A C+ ++ + +++K+ +
Sbjct: 351 LIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQG 410
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I P+ NT++ILI KE + A D+ KG++
Sbjct: 411 IQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYK 447
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 1 MISAFCRGGCFEEAKQ-----LARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK 55
+I C G EA +AR F Y + L+N + C+ G+ + + V+RK
Sbjct: 124 LIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGI-LINGL----CKMGETRAALQVLRK 178
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
+D ++ + + +I KEK+ AY M K P+ S+LI+ +
Sbjct: 179 IDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQ 238
Query: 116 HSEALCLQH---VKDIAKDRCAMPFM 138
EA L H + +I D C +
Sbjct: 239 FKEAFGLFHEMVLTNINPDVCTFNIL 264
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G FE A+ + +D K K V N M+ C G + + ++ K+++
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+PD T+ +I+ K A + + +M +G
Sbjct: 481 CTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRK-- 55
+I FC G F+EA L + DV N ++ A C+ G + ++V+ VM K
Sbjct: 229 LIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEV 288
Query: 56 ------------LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELC 103
+ + ++PD +++ I+IK K KM A +M KG P++
Sbjct: 289 NQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTY 348
Query: 104 SSLIFHLGKMRAHSEA 119
SSLI L K S A
Sbjct: 349 SSLIDGLCKSERISHA 364
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA +L K DVV ++++ +C G + + ++
Sbjct: 194 IIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTN 253
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
I+PD TF+IL+ KE + M K+ +Q
Sbjct: 254 INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQ 290
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 49/109 (44%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I CR G E+A +D + ++ N+++ +C+ G + + ++ ++ + I
Sbjct: 232 IHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGI 291
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
SPD ++ IL+ F E + +M +P C+S++ L
Sbjct: 292 SPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGL 340
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR GC +EA + + D++ N ++ YC G E + + ++ +
Sbjct: 406 LIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQN 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P+ T+ ++I + K + A+ + M K P
Sbjct: 466 ILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFP 503
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G +A L ++ + D +++ YCR G+++ + +K+
Sbjct: 547 LVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNN 606
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++P+ T+ L+ F K K +A + DM + P+ + ++LI
Sbjct: 607 VTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALI 653
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +EA +L + K D+V +++ YCR M+ + + +++
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + K G Q E + ++ L K EAL
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A C+ ++A ++ D + NS+L YC +G + I ++K+
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T+ L+ Y K A + M K+G +P+
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV +S++ A C+ M+ + V+ + + + PD T++ ++ + A T+
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 294
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
M G +P SSL+ +L K +EA
Sbjct: 295 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325
>gi|356573455|ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
Length = 1122
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++++ C+ F +A QL A + V + ++ YC+ G + ++ + +
Sbjct: 218 LLNSLCKINAFPQAYQLLALMTALGINFSVNIWTILIHNYCKFGRLRLANNLFHNMLQTG 277
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SP+ T+ IL K F + M A+R M G P+ LC+ LI L K
Sbjct: 278 CSPNVVTYTILFKAFMQSNMPTPAFRLFNIMLSSGQSPDLILCNVLIDCLSK 329
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SA C+ G E+A ++ R+ E+ +VV N+++ +C G + + + +
Sbjct: 205 VLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNG 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ P+ TF+ LI F KE A R +M P ++LI G++
Sbjct: 265 LEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQV 317
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
N +L A C++G +E + V+R+++ + I+P+ +++ LI + + +A + M K
Sbjct: 203 NLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGK 262
Query: 94 KGHQPEEELCSSLI 107
G +P +SLI
Sbjct: 263 NGLEPNVVTFNSLI 276
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + ++EA +L ++ + D V N++L Y +TG + + V ++++L
Sbjct: 391 LMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLG 450
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D T++ LI Y ++ ++ M+A+ DM +G P S+LI K H +A
Sbjct: 451 IEKDTVTYNSLINGYGKQGRLDMVAFLVQ-DMRAQGVAPSVLTYSTLIDIYSKAGMHGDA 509
Query: 120 L 120
Sbjct: 510 F 510
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ + + G ++E + + E + D V NS++ Y + G ++ V +++ +
Sbjct: 426 LLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG 485
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P T+ LI + K M+ A+ +D + G + + L SS I L K
Sbjct: 486 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAK 537
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +A + DF+ K DVVL +S + + G +E + ++ ++ ++
Sbjct: 496 LIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMG 555
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
I P+ T++ +I F K K++
Sbjct: 556 IKPNVVTYNTIIDAFGKSKIF 576
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDK-------------YDVVLLNSMLCAYCRTGDME 47
+I C+ G EEA+ L E + D L +M+ C +G +
Sbjct: 452 LIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLIL 511
Query: 48 SVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++ +L + + PD T+++LI F K K A++ ++ KGH P+ +LI
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLI 571
Query: 108 --FHLGKMRAHSEALCLQHVKDIAKDRCA 134
FH R E + + + K+ C
Sbjct: 572 DGFH----RVDREEDAFRVLDQMVKNGCT 596
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +EA L + FE + + +S++ R + V RK+ +
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + ILI+ F + M A + DM ++G P+ ++LI + +A
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 121 CLQHVKDIAKDRC 133
LQ +I+K+ C
Sbjct: 397 SLQL--EISKNDC 407
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C G +A +L D++ N ++ +C+ ++ + R+L
Sbjct: 500 MVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKG 559
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
SPD T+ LI F + A+R + M K G P
Sbjct: 560 HSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTP 597
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSML-CAYCRTGDMESVIHVMRKLDEL 59
+I FC G ++A+ L + +K D + ++L C CR G ++ + +++ L
Sbjct: 382 LIKGFCDVGLLDKARSLQLEI-SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENL 440
Query: 60 AISPDYNTFHILI 72
SP TF+ LI
Sbjct: 441 GCSPSIMTFNALI 453
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ +C+ G +EA++L + K +V N M+ +Y + GD + VI + +K++ +
Sbjct: 252 MIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVG 311
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD T+ +I F + A M G +P
Sbjct: 312 LAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEP 349
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ +C+ G +EA++L + K +V N M+ +Y + GD + VI + +K++ +
Sbjct: 252 MIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVG 311
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD T+ +I F + A M G +P
Sbjct: 312 LAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEP 349
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G EA ++ E+ D V N+++ +C G ++ +H +++++
Sbjct: 284 VVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKG 343
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ +T++ILI F + +M LA DM G
Sbjct: 344 YLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDG 378
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G A +L RD + DVV NS++ C+ G++ ++ KL
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEE----LCSSLIFHLGK 112
I PD T++ LI + + M+ AY ++ + P + L S+ I +GK
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGK 711
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF RGG +EA +L D + D + N ++ A+C+ G E + + ++
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + ++LI + A + DM +G P+ +SLI L KM EA
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645
Query: 121 CL 122
L
Sbjct: 646 NL 647
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A + D A +++ ++L +C+ +E +V+ ++
Sbjct: 386 LIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ +++L++ K A + +M KG +P+ ++LIF L K+ +AL
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDAL 505
Query: 121 CL 122
L
Sbjct: 506 AL 507
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G E+A L + K + N ++ CR G + + + ++R +
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T++ LI K A+ + +G QP+ ++LI
Sbjct: 621 LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ C+ GC EA +L + ++ K D+ N ++ C+ +E+ + KL + +
Sbjct: 419 LDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
PD T+ I+I F K A M + G P S+L+ K E +
Sbjct: 479 QPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVK 538
Query: 122 LQHVKDIAKD 131
L H K I KD
Sbjct: 539 LLH-KMIQKD 547
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G + AK+L +K + DV+ ++ YC+T ++E + + ++ +
Sbjct: 313 LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 372
Query: 61 ISPDYNTFHILIK 73
PD TF +L+K
Sbjct: 373 KWPDMKTFCVLLK 385
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G ++EAK+L + + + DVV ++++ C+ G + + +
Sbjct: 243 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 302
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI+ F A + M KG++P+ + LI+ K EA+
Sbjct: 303 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 362
Query: 121 CL 122
L
Sbjct: 363 KL 364
>gi|357153691|ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Brachypodium distachyon]
Length = 936
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEE-AKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
M++A+ + G EE A L + AK D +D N ML Y R G +E V +V+ +L
Sbjct: 799 MLNAYGKAGQLEEFAAVLQKMRRAKCD-FDHYTYNIMLNIYGRKGWIEGVAYVLSELKSR 857
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +++ LIK + M A + M +M KG + ++LI L + EA
Sbjct: 858 GVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRLKGINADRITYTNLIAALQRNENFLEA 917
Query: 120 L 120
+
Sbjct: 918 V 918
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++A+ + G EEAK + + + +VV N+++ Y + DM+ V L++ +
Sbjct: 346 LNAYSQQGKMEEAKLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKAGL 405
Query: 62 SPDYNTFHILIKYFRKEKMY---MLAYRTMVDMHKKGHQP 98
+PD T+ +I+ F + Y +L YR + + G QP
Sbjct: 406 APDETTYRSMIEGFGRADKYDEALLYYRK---LKESGFQP 442
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 1 MISAFCRGGCFEEAKQ---LARDFEAKYDKYDVVLLNSM--LCAYCRTGDMESVIHVMRK 55
MI+ + R G F+++++ L D DK L N + L AY + G ME +++
Sbjct: 310 MITLYTRSGLFDKSEEVIVLMND-----DKVIANLENWLVQLNAYSQQGKMEEAKLILQS 364
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
+ + +SP+ F+ LI + K A + K G P+E S+I G+
Sbjct: 365 MVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKAGLAPDETTYRSMIEGFGRADK 424
Query: 116 HSEAL 120
+ EAL
Sbjct: 425 YDEAL 429
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 19 RDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYF 75
RD +D+ DVV ++++ AY R G ++ + ++ + + P+ +++ +I F
Sbjct: 166 RDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGF 225
Query: 76 RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+Y A +DMH +G +P+ SS++ +G +
Sbjct: 226 NHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
>gi|125537837|gb|EAY84232.1| hypothetical protein OsI_05614 [Oryza sativa Indica Group]
Length = 367
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
A CR G E QL K D + N+++ A+C D V+ V+R++ + + P
Sbjct: 148 AVCRRGEPREIAQLLPVLADHGVKADAPVYNALMKAHCAASDPAGVLGVLRRMKDDGVEP 207
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLI 107
D T++ L+ + M A RT +D M GH P+ +SL+
Sbjct: 208 DLVTYNTLVFGLARAGMVTKA-RTYLDAMAAAGHFPDVITYTSLM 251
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G ++EAK+L D E K V ++ +TG+++ + ++ ++ +
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++IL+ Y KE AY+ +V M G P
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPN 360
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + + G +E+A L + K + VV NS L CR G+M++ + + + + E
Sbjct: 192 MIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKG 251
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ T+ +L++ + Y A + M DM G + L+ HLGK
Sbjct: 252 HHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGK 303
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 54/121 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ + G +E + L + + + K DVV N ++ C+ G + V+ K+
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ ++I + + A + + M GH P + +SL+ L K + + +
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYV 416
Query: 121 C 121
C
Sbjct: 417 C 417
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+ + G F E + + + K DV +NS L A+ +G +E++ K
Sbjct: 272 LIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASG 331
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
ISP+ T++IL+ + K KMY
Sbjct: 332 ISPNIKTYNILLDSYGKAKMY 352
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G E+ + + R +++ K + V L S++ AY R GD++ + V+R ++
Sbjct: 377 VIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSD 436
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI--FHLGKMRAHSE 118
I+ D F+ L+ F + + + M + +P++ C+++I F + + H
Sbjct: 437 ITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKWFLIKGIDDHR- 495
Query: 119 ALCLQHVKDIAKDR 132
+Q+++D+ R
Sbjct: 496 ---VQYLRDLKDGR 506
>gi|449440630|ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ EEA+++ + EA+ D+ ++ +C +++ + K+ E
Sbjct: 406 LVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKN 465
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH-QPEEELCSSLIFHLGKMRAHSEA 119
PD + +LI F +K AY+ ++++ K H +P + LI +L ++R EA
Sbjct: 466 CDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEA 525
Query: 120 LCL 122
+ L
Sbjct: 526 IAL 528
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLD 57
++SA+ R G EEA++L E K D ++ N+++ AY +G DME+++ M K
Sbjct: 355 LLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSS 414
Query: 58 ELAISPDYNTFHILIKYF 75
PD T++ LI+ +
Sbjct: 415 SKQTKPDIGTYNTLIQVY 432
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ N ++ AY ++ ++E ++ E P+ TF +LI +R + A
Sbjct: 103 DLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELF 162
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRC 133
V M K+G+ P C++ + L + + A L +D+ K C
Sbjct: 163 VQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEAL--FRDLEKYEC 205
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 1 MISAFCRGGCFEEAKQL---ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
+++AF R G + EA++ ++F+ K D Y N+++ AY + G + + + +
Sbjct: 250 LMNAFARQGLYREAERYFDKLQEFDYKPDHY---AYNALMEAYSQGGSPAGALEIFQTMQ 306
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD + +ILI + + +Y A + M G P
Sbjct: 307 RNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSP 347
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A R F+ +L E K D +L NS++ A+ +G+M+ + + RK+ E
Sbjct: 54 LVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESG 113
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P +TF+ LIK + A + + + G +P + + L+
Sbjct: 114 CKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILV 160
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ + R G E+A+ + +VV+ +++ +C G ME + V K+ E+
Sbjct: 334 LAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+SP+ T+ LI + + K + A + M +KG P++
Sbjct: 394 VSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKK 433
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF G +EA +L R + K N+++ Y G E + ++ L +
Sbjct: 89 IINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGG 148
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T++IL++ + ++ A+ + M G QP+
Sbjct: 149 VKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPD 187
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV ++++ A+ G M+ + + + I PD + F IL K + + A +
Sbjct: 292 DVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESIL 351
Query: 89 VDMHKKGHQPEEELCSSLI 107
M K G P +C+++I
Sbjct: 352 TSMRKYGVHPNVVICTTVI 370
Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G EEA +L + K + N ++ A+C +ME +++ K+
Sbjct: 124 LIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASG 183
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++ L + + ++ + A +++M + P E CS ++
Sbjct: 184 MQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIV 230
>gi|206575140|gb|ACI14440.1| Os01g67210-like protein [Secale cereale]
Length = 358
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + G E+AK L R E++ + DV + ++ Y + G ++ ++R+ ++
Sbjct: 199 VITGXSKEGEMEDAKGLIRVMESRGLRXDVYTYSEIMSXYAKGGMIDEAHSLLREAKKIH 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
P T+HILI+ + K + + A + +M + G QP + + LI L
Sbjct: 259 PKPSRVTYHILIRGYCKMEEFEKALECLKEMKEDGLQPNXDEYNKLIQSL 308
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S + +GG +EA L R+ + + K V + ++ YC+ + E + ++++ E
Sbjct: 234 IMSXYAKGGMIDEAHSLLREAKKIHPKPSRVTYHILIRGYCKMEEFEKALECLKEMKEDG 293
Query: 61 ISPDYNTFHILIKYFRKEKM-YMLAYRTMVDMHKKG 95
+ P+ + ++ LI+ + M + A + + +M G
Sbjct: 294 LQPNXDEYNKLIQSLXLKXMDWRTAEKLLEEMEGSG 329
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G EA++ D + + K + + +++L YC+ G ++ + R++
Sbjct: 571 LISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRG 630
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++ D + +LI +++ + MH +G +P+ L +++I
Sbjct: 631 VAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMI 677
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G AK L + A K +VV+ S++ YC+ G++ + + ++
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Query: 61 ISPDYNTFHILI 72
ISP+ TF LI
Sbjct: 491 ISPNTYTFTALI 502
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G +EA ++ + D + ++++ YCR GD++ I + +
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 839
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD ++ LI A+ DM ++G +P +SLI
Sbjct: 840 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G A +L + K + +++ C M + ++ E
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+++LI+ KE + A+ + +M +KG P+ LI L SEA
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G E AK+L +K D+V + ++ YCR G+ +++++ ++
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
+ P + T++I++K + KE A M K+
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVIHVMRKLD 57
+I+A C+ G +A+ + D + +VV N+++ YC+ G M V++++
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
E +SP+ TF+ILI F K+ + + +M + +P +SLI L S
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 118 EALCLQ 123
EA+ ++
Sbjct: 349 EAISMR 354
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G ++ L + E + DV N ++ CR G++E+ + +L
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD TFHIL++ + ++ A + +M K G +P
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
>gi|115443847|ref|NP_001045703.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|41052618|dbj|BAD08127.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|41053255|dbj|BAD07623.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535234|dbj|BAF07617.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|125580592|gb|EAZ21523.1| hypothetical protein OsJ_05149 [Oryza sativa Japonica Group]
gi|215766292|dbj|BAG98520.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
A CR G E QL K D + N+++ A+C D V+ V+R++ + + P
Sbjct: 148 AVCRRGEPREIAQLLPVLADHGVKADAPVYNALMKAHCAASDPAGVLGVLRRMKDDGVEP 207
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLI 107
D T++ L+ + M A RT +D M GH P+ +SL+
Sbjct: 208 DLVTYNTLVFGLARAGMVTKA-RTYLDAMAAAGHFPDVITYTSLM 251
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR +EA++L + + DVV N+++ A C GD + + +++++++
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 61 ISPDYNTFHILI 72
I P T+H L+
Sbjct: 610 IRPTLRTYHTLV 621
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +A+Q+ V+ N+++ YC+ D+ + ++
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD+ T++ LI K +M A +++M K G P E ++LI
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G EA + D K + + NS++ AY +GD E ++ K+
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 539
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+S T+++L+K + A + + +G +P+
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A Q+ ++ ++ N+++ +C G ME +++++ E
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
PD ++ +I F + + A++ V+M KG P+ SSLI L K R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR E+A QL + AK DV +S++ C+ + V + +++ L
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI + E A R +M +KG P+ + LI K EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G F +A L + +VV +++ + C+ G++ + + ++ +
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T+ LI F ++ AY+ M +M + G P
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D V S++ AYC GD++ + + ++ + SPD T+++LI F K+ A R +
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 89 VDMHKKGHQPEEELCSSLI 107
+ + + P E ++LI
Sbjct: 577 LKLLYEESVPNEITYNTLI 595
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +E ++ + + D V N+++ YC G+ + + ++ +
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP+ T+ LI K A + M +G P ++LI
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ EA +L R K +++ N ++ CR G M+ ++ ++ +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI + + A +M K G P ++LI + K + A+
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 121 CLQHVKDIAKDRCAMPFMRKF 141
D +DR P R +
Sbjct: 364 ---EFLDQMRDRGLHPNGRTY 381
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 9 GCFEE-----AKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
GCFE A +L + +A+ K + V N M+ +C G ++ +VM K+ E SP
Sbjct: 360 GCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
D T++ +I + K AY+ M +M +KG
Sbjct: 420 DCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G E+A Q K D+ N +L CR G +E + +
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++I+I F KE+ A+ M +M K +P+ ++++ L K EA
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 47/122 (38%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC G +EA + D N+M+ YC+ G M +M ++
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + L+ EK AY + K+G+ +E +LI K AL
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511
Query: 121 CL 122
L
Sbjct: 512 KL 513
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 43/97 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G E+ L + +K D V N ++ ++C+ +E +M +++
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
+ PD T++ ++ K A + + +KG Q
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQ 698
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G +EA +L + E K + +VV +M+ + G +E+ + ++ ++
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+Y T+ +LI + K +A+ + +M K+ H P
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 846
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M++ +C G + A++L D + D Y L LC RT + +V+ M + L
Sbjct: 140 MVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCL- 198
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ IL++ K Y A + + +MH KG P+
Sbjct: 199 --PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPD 235
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ +A + ++ D+V N++L A CR G+++ I ++ +L +
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKG 406
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SP +++ +I K A + +M KG QP+
Sbjct: 407 CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPD 445
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ +++A +L + K D+V N +L C+ G +E + ++ L
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ +++I++K + + A + M +M KG P
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A CR G + A +L + K ++ N+++ + G + + ++ ++
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ + +E A RT + G +P L ++++ L K R A+
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501
Query: 121 CL 122
L
Sbjct: 502 DL 503
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 45/89 (50%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
+E+A++L + K +VV N ++ CR G +E + V+ ++ + +P+ +++
Sbjct: 287 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
L+ F K+K A + M +G P+
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRGCYPD 375
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + R G A+ E + K D + N ++ +C GDME+ + K+
Sbjct: 768 MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKG 827
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++ILI + ++ + + + +M G P +LI L K S+ L
Sbjct: 828 VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCK---GSKLL 884
Query: 121 CLQHVKDIAKDRCAMPFMR 139
Q VK +DR P +R
Sbjct: 885 EAQIVKRDMEDRGVSPNVR 903
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A C+ G E+A+++ AK + VL N+M+ Y R GD+ + +++
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ ++ LI+ F + A + + M KG P E + LI G R +
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYG--RKYEFDK 850
Query: 121 CLQHVKDIAKDRCAMP 136
C +K++ +D MP
Sbjct: 851 CFDLLKEM-EDNGTMP 865
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ ++A+QL + A+ ++ N+++ YC+ G+ E V ++
Sbjct: 593 LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADN 652
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P TF+ L+K K M A + +M +G P+
Sbjct: 653 IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPD 691
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I G EA+ + + K K DV NS++ Y G+++ I + ++
Sbjct: 943 LIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSG 1002
Query: 61 ISPDYNTFHILIKYFRKEKM 80
I P T+H+LI KE +
Sbjct: 1003 IKPTLKTYHLLISLCTKEGI 1022
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+G EA+ + RD E + +V + N ++ C G +E ++ +
Sbjct: 873 LINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKG 932
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I + T++ LI A ++++ +KG +P+ +SLI
Sbjct: 933 IELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979
>gi|242060055|ref|XP_002459173.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
gi|241931148|gb|EES04293.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
Length = 574
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G E+A+++ + EA+ D+ ++ YC GD++ + ++ E
Sbjct: 357 LVYGLCKAGKLEDARKVLDEMEAEGCVPDLKTWTLLIQGYCSAGDVDRAVQYFTEMIEKG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH-QPEEELCSSLIFHLGKMRAHSEA 119
+ D + +++K + AY V+M K +P + C LI L ++ EA
Sbjct: 417 LDADADLLDVILKGLCSHEKVEEAYSLFVEMVDKAELRPFQGTCQRLIGDLLRVNKLEEA 476
Query: 120 LCL 122
L L
Sbjct: 477 LAL 479
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR +EA++L + + DVV N+++ A C GD + + +++++++
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431
Query: 61 ISPDYNTFHILIK 73
I P T+H L+
Sbjct: 432 IRPTLRTYHTLVS 444
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +A+Q+ V+ N+++ YC+ D+ + ++
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLG 111
I PD+ T++ LI K +M A +++M K G P E ++LI G
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 272
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G EA + D K + + NS++ AY +GD E ++ K+
Sbjct: 302 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 361
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+S T+++L+K + A + + +G +P+
Sbjct: 362 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 400
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I F + G ++A Q+ ++ ++ N+++ +C G ME +++++ E
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
PD ++ +I F + + A++ V+M KG P+ SSLI L K R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FCR E+A QL + AK DV +S++ C+ + V + +++ L
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI + E A R +M +KG P+ + LI K EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G F +A L + +VV +++ + C+ G++ + + ++ +
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T+ LI F ++ AY+ M +M + G P
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D V S++ AYC GD++ + + ++ + SPD T+++LI F K+ A R +
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 89 VDMHKKGHQPEEELCSSLI 107
+ + + P E ++LI
Sbjct: 577 LKLLYEESVPNEITYNTLI 595
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +E ++ + + D V N+++ YC G+ + + ++ +
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SP+ T+ LI K A + M +G P ++LI
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ EA +L R K +++ N ++ CR G M+ ++ ++ +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI + + A +M K G P ++LI + K + A+
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 121 CLQHVKDIAKDRCAMPFMRKF 141
D +DR P R +
Sbjct: 364 ---EFLDQMRDRGLHPNGRTY 381
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G +EA +L + E K + +VV +M+ + G +E+ + ++ ++
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+Y T+ +LI + K +A+ + +M K+ H P
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 846
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
C+ G +A +L ++ +++ K DVV N+++ A + +E I V R++ E P+
Sbjct: 107 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 166
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
T + +IK ++ AYR + +M K+G QP+
Sbjct: 167 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPD 200
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ +EA+ L EAK + + N+++C CR G + + +++ +
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318
Query: 61 ISPDYNTFHILIKYF---RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P T++IL+ R+E A M +KG P+ S+LI LGK
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++S C GG +A+ L R +A Y DVV N++L +C+ G+++ + + +
Sbjct: 16 LLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVGELDEALKIFDGAVKR 74
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T++ LI F K A R + M + P+ +SL+ L K
Sbjct: 75 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
>gi|242096870|ref|XP_002438925.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
gi|241917148|gb|EER90292.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
Length = 485
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ RG + A + D E K D V N+MLC + R GD+E + V K+
Sbjct: 310 LMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYNTMLCGFQRVGDLEGIWKVYSKMVSSG 369
Query: 61 ISPDYNTFHILIKYF 75
P T +L+K F
Sbjct: 370 FMPRTRTTMLLMKVF 384
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S R G +EA L R E D+ N +L + RTG + I + ++
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD +++ ++ + M+ A + M +M+ KG + + SS++ +GK+
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKI 629
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G EEA + + + K DVVL+N+++ + G + I + +++ L
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P+ T++ +IK F + A+ M + G P S LI K +A
Sbjct: 366 CTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKA 425
Query: 120 LCL 122
L L
Sbjct: 426 LLL 428
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF + G + A L + + + ++L Y + G +E + +++++ E
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ LIK K AY ++M K+G +P+ L ++LI LGK ++A+
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAI 355
Query: 121 CL 122
L
Sbjct: 356 KL 357
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A +L + + +VV M+ +CR G ++ +++K++
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L++ F + + + M +K P+ CS ++ L K + E L
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 560
Query: 121 CL 122
L
Sbjct: 561 HL 562
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ C+ C EA +L + ++ K ++ LN ++ C+ G +E+ + KL
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 466
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T+ I+I F +E A + M G P+
Sbjct: 467 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 504
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EAK+L D+V NS++ +C GD+ S + +
Sbjct: 266 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
PD ++++LI + K A + +M G +P SL IF GK+
Sbjct: 326 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 385
Query: 118 EALCLQHVKDIAKD 131
+ + IA++
Sbjct: 386 KLFSVMKAHGIAEN 399
>gi|40253558|dbj|BAD05505.1| PPR protein-like [Oryza sativa Japonica Group]
gi|40253737|dbj|BAD05677.1| PPR protein-like [Oryza sativa Japonica Group]
Length = 297
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 11 FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
+EA +L D + K D V ++++ YC+ ME+ + + R++ +SP+ T++I
Sbjct: 1 MDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNGVSPNIITYNI 60
Query: 71 LIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA------LCLQH 124
+++ + A V + K+G Q E C+ ++ L K EA LCL
Sbjct: 61 VLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKNNLTGEALQMFQNLCLMD 120
Query: 125 VK 126
VK
Sbjct: 121 VK 122
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G +A +L + + + D V N+++ AYC+ GD+ S + K+ E
Sbjct: 344 ILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAG 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++P+ T+ LI F K A + M G P S ++
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIV 450
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G EA + E + D+V NS++ +C+ G M MR E+
Sbjct: 241 LIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMR---EAMRMFGEIK 297
Query: 61 IS-PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAH 116
+ P++ T+ LI + K + A R M KG P +S++ L G++R
Sbjct: 298 DAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDA 357
Query: 117 SEAL 120
++ L
Sbjct: 358 NKLL 361
>gi|125532572|gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indica Group]
Length = 508
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + G F+EA++ D + +V NSM+C C G+ + +++ ++
Sbjct: 399 MITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRG 458
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ R A + M KGH
Sbjct: 459 CTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGH 494
>gi|357499035|ref|XP_003619806.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355494821|gb|AES76024.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 302
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G ++A+++ RD K ++ + N M+ C+ G + + V+ ++++
Sbjct: 106 LVDGLCKNGRLKDAQEVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNG 165
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+PD T+ LI+ K M A + + +M +G
Sbjct: 166 CTPDVVTYKTLIRALFKNDMNDKAVKLLREMLSRG 200
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + L D + + D+++ S+L A + ++ I +++K+ +
Sbjct: 36 LIDGLCKSGKISDVWDLIDDMHDRGQQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRG 95
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +L+ K A D+ KG+ + + +I L K EAL
Sbjct: 96 IEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEAL 155
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A ++ R K + D++ ++++ YC G ++ V L +
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I P+ ++ ILI + K+K A + ++ +KG +P+ S+++ L
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGL 388
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ + A L + + K ++ NS++ C+ G E V ++ ++ L
Sbjct: 209 VIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN 268
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+P+ +TF ILI KE A M M +KG +P+
Sbjct: 269 INPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ FCR G F+E K + R E + + N ++ + R+ + ++ M+++
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548
Query: 61 ISPDYNTFHILIKYFRK 77
S D T +LI ++
Sbjct: 549 FSFDATTTGVLINVLKE 565
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI CR G E+ +L DVV + ++ +CR G +++V ++ K+ +
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P+ + LI + K + A++ V M + G+ +C+ L+ L K
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCK 495
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 47/109 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR FE +K + + +M+ CR G + + ++ K+ +
Sbjct: 349 LLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+ PD TF +LI F + + M+K G P + ++LI++
Sbjct: 409 VVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYN 457
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A CR G F+EAK+L D V N++L ++G + + + ++ +
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618
Query: 61 ISPDYNTFHILI-KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ I+ R+ KM + + K PE+ + ++ F G RA
Sbjct: 619 VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTT--FVDGLFRAGQSK 676
Query: 120 LCLQHVKDIAKD 131
L +D+ K+
Sbjct: 677 AALYFCEDMEKN 688
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 5 FCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
FCR EA +L + K DV+ N ++ C GD+ S + + +++ + + P+
Sbjct: 950 FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPN 1009
Query: 65 YNTFHILI 72
T+ ILI
Sbjct: 1010 MTTYCILI 1017
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E A +L + + +VV M+ +CR G ++ +++K++
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L++ F + + + M +K P+ CS ++ L K + E L
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585
Query: 121 CL 122
L
Sbjct: 586 HL 587
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G +EAKQL + + + ++ NS++ +C G E ++ ++ +
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD TF++LI KE + A + + M + G P+ +SLI
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 327
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ C+ C EA +L + ++ K ++ LN ++ C+ G +E+ + KL
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T+ I+I F +E A + M G P+
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +EE+K+L + + + D+V N ++ C+ G + ++ + E
Sbjct: 256 LIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 315
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD T++ LI+ F A V M KG +P+
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPD 354
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EAK+L D+V NS++ +C GD+ S + +
Sbjct: 291 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 350
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
PD ++++LI + K A + +M G +P SL IF GK+
Sbjct: 351 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 410
Query: 118 EALCLQHVKDIAKD 131
+ + IA++
Sbjct: 411 KLFSVMKAHGIAEN 424
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +EA + + V N+M+ G ++ V +M+K++EL
Sbjct: 323 LIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQ 382
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++ILI + K LA +M + G QP+
Sbjct: 383 CPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPD 421
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G E L D + D V N+++ AYCR DM S ++ M K+
Sbjct: 606 LIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAG 665
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++I + M A + + ++ G P+ ++L+
Sbjct: 666 CEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLM 712
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA CR G EA +L ++ D+ N ++ CR G +E V +++ +
Sbjct: 571 IISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNG 630
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD T++ +I + + K A M M G +P+
Sbjct: 631 LTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPD 669
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ CR EA Q + A+ + NS++ A CR G+M + + + + + +
Sbjct: 537 INGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGL 596
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T +ILI +E + ++DM G P+ +++I
Sbjct: 597 VPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTII 642
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E + L ++ E K+ +V+ +S++ Y + G ++ I+VM+K+ +
Sbjct: 384 LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQN 443
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + ILI + K +A +M G + L L+ +L + + EA
Sbjct: 444 IIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 41/81 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FCR G + +++ + + DV+ N+++ YC+ G+M + ++ ++ +
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
+ D +++ LI F K Y
Sbjct: 178 LLSDIVSYNTLINGFCKRGEY 198
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVD 90
+ +++ YC+ GDME V ++++++E I+P+ T+ +I + K+ + A M
Sbjct: 379 ITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKK 438
Query: 91 MHKKGHQPEEELCSSLI 107
M + P + + LI
Sbjct: 439 MLDQNIIPNAYVYAILI 455
>gi|226530981|ref|NP_001141613.1| uncharacterized protein LOC100273731 [Zea mays]
gi|194705268|gb|ACF86718.1| unknown [Zea mays]
gi|414870824|tpg|DAA49381.1| TPA: hypothetical protein ZEAMMB73_722490 [Zea mays]
Length = 504
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+++ G FEEA++ D + +V NSM+ C G+ + +++ +D
Sbjct: 395 MIASYVAAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDMDSHG 454
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P+++ + L++ R A + M KGH
Sbjct: 455 CTPNFSVYSSLVRRLRNAGKDTQANNVIKYMTDKGH 490
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AFCR G + A + + D+V N++L C+ G + + + KL E+
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SP+ ++++ + + A +++M G P+E +S+I
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS CR G +EA +L D + VV N +L +C+ +E I+V+ +
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 61 ISPDYNTFHILIK 73
P+ T+ +LI+
Sbjct: 539 CRPNETTYTVLIE 551
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A ++ R+ E K + DV+ N +L A G E +M K+
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T+ ILI ++ A + M +KG P+
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++ A G +EE ++L + F K D +VV + ++ CR G +E +++++ + E
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD ++ LI F +E +A + M G P+
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +A+ + + K + N M+ YC G +E + +++K+
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +LI+Y+ K A M +KG +P +S I+H+ + ++
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKP-----NSTIYHI-LLHGYATKG 357
Query: 121 CLQHVKDIAK--DRCAMPFMRKFF 142
L V+D+ R +PF + F
Sbjct: 358 ALIDVRDLLDLMIRDGIPFEHRAF 381
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S R G +EA L R E D+ N +L + RTG + I + ++
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I PD +++ ++ + M+ A + M +M+ KG + + SS++ +GK+
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKI 629
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G EEA + + + K DVVL+N+++ + G + I + +++ L
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365
Query: 61 ISPDYNTFHILIKYFRKEK 79
+P+ T++ +IK + K
Sbjct: 366 CTPNVVTYNTVIKALFESK 384
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF + G + A L + + + ++L Y + G +E + +++++ E
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ LIK K AY ++M K+G +P+ L ++LI LGK ++A+
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAI 355
Query: 121 CL 122
L
Sbjct: 356 KL 357
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +EA + + V N+M+ G ++ V +M+K++EL
Sbjct: 322 LIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQ 381
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++ILI + K LA +M + G QP+
Sbjct: 382 CPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPD 420
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C G A +L E DVV N+++ +C+ G ++ + ++ ++
Sbjct: 279 LIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMS 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
+SP T++ILI + K + R +M +
Sbjct: 339 LSPTTVTYNILINGYSKAGNCEMGNRLFEEMSR 371
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ + + G E +L + K D++ N+++ C+ G + +++R+LDE
Sbjct: 349 LINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ +TF LI +K A++ M K P
Sbjct: 409 LVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTP 446
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ G +EA +L + + V N ++ Y + G+ E + ++
Sbjct: 314 LVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQ 373
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
+ D T++ LI KE A + ++ +KG P S+LI+
Sbjct: 374 VKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIY 421
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + R G +EA L R K + V N+M+ Y + G M+ + + + E
Sbjct: 365 MIAGYSRSGRMDEALNLFRQMPIK----NSVSWNTMISGYAQAGQMDRATEIFQAMREKN 420
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I +++ LI F + +Y+ A +++V M K+G +P++
Sbjct: 421 IV----SWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQ 456
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS+F R G EA ++ + E K D++ NS++ + GD++ R++ E
Sbjct: 325 LISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD T+ LI+ F K +A R +M +G P
Sbjct: 385 LNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPN 423
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G +A ++ E DV+ N M+ YC+ G++ + + V LD ++
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMS 199
Query: 61 ISPDYNTFHILIK 73
+SPD T++ +++
Sbjct: 200 VSPDVVTYNTILR 212
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ + A + ++ D+V N+ML A C+ G +E + ++ +L
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I K A + + +M K +P+ SSL+ L + EA+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 121 CLQH 124
H
Sbjct: 505 KFFH 508
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A CR A +L + + DVV N ++ C+ G ++ I + +
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T +I+++ +M A + + DM +KG P
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS +C+ G A + D VV N++L + C +G ++ + V+ ++ +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPD---VVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ ++ A + + +M +G P+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +EA + D + + +V+ N +L + C TG ++ +
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
SP TF+ILI + ++ + A + M + G QP
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + C G + +A++L D K VV N ++ CR G + I ++ K+ +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ +++ L+ F KEK A + M +G P+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +A +L + AK K D + +S++ R G ++ I + + +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ ++ K + A +V M +G +P E + LI L EAL
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 121 CLQHVKDIAKDRCAMPFMRK 140
++ + C M+K
Sbjct: 575 ------ELLNELCNKGLMKK 588
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++ + C G ++A ++ D + D Y DV+ ++ A CR V H M+ LDE+
Sbjct: 210 ILRSLCDSGKLKQAMEVL-DRMLQRDCYPDVITYTILIEATCRD---SGVGHAMKLLDEM 265
Query: 60 ---AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+PD T+++L+ KE A + + DM G QP
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G +EA +L + E K + +VV +M+ + G +E+ + ++ ++
Sbjct: 709 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 768
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++P+Y T+ +LI + K +A+ + +M K+ H P
Sbjct: 769 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 805
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S F + +E A+++ + D+V NS++ Y R G+ +++ L +
Sbjct: 659 MLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSG 718
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
SPD +++ +IK F ++ + A R M +M +G P
Sbjct: 719 ESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICP 756
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G + EA + ++ E D V N ++ AY R G E V+ +
Sbjct: 344 LLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +I + + + A + M K G P +S++ LGK ++ SE +
Sbjct: 404 VMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGK-KSRSEEM 462
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA R G EAK+ + ++ + V N++L + + G +++++++++
Sbjct: 309 VISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNN 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ L+ + + Y + M +KG P +++I G RA E
Sbjct: 369 CTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYG--RAGKEVK 426
Query: 121 CLQHVKDIAKDRC 133
LQ + K C
Sbjct: 427 ALQLFNQMKKSGC 439
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYN 66
RG C++ A+++ + + D+V N+++ +CR G M+ I VM ++ I P
Sbjct: 701 RGECWK-AEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIF 759
Query: 67 TFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
T++ + + M+ + M +K +P E ++ K R + +A+
Sbjct: 760 TYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAM 813
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 DKY--DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYML 83
DKY DV ++L AY R G + I + ++ + +SP T+++++ + K
Sbjct: 226 DKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWD 285
Query: 84 AYRTMVD-MHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++D M +G Q +E CS++I G+ +EA
Sbjct: 286 KILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEA 322
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
+A L R E ++ D V N++ +CR D + ++R++ E I+P T++I++
Sbjct: 194 KAASLVRALERRFPP-DAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIIL 252
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPE 99
K F + A+ + M K+G E
Sbjct: 253 KGFFRSGQLQHAWDFFLQMKKRGSNDE 279
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVIHVMRKLDEL 59
++ A CR EEA++L F K + N +L +C D+ V + ++ L
Sbjct: 248 LLCALCRNMFVEEAEELIH-FNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNL 306
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD ++ +I F K + R +M KKG P ++ +++I+ L K R EA
Sbjct: 307 CITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEA 366
Query: 120 LCL 122
L L
Sbjct: 367 LNL 369
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ +C+ C EA +L +D + + D V M+ YC+ + + + + E
Sbjct: 622 MINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERG 681
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
I PD + ++IK +A++ +M G P L
Sbjct: 682 IKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATL 723
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ +A C G E A L F D V M+ YC+T + + + + E
Sbjct: 587 IFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERG 646
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+PD T+ I+I + K A+ DM ++G +P+
Sbjct: 647 ITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPD 685
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ EEA +L + + ++ ++++ +C+TG +E+ V K+ E
Sbjct: 615 LVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG 674
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ T+ LI KEK L + + M + P + + +I L K+ EA
Sbjct: 675 YCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEA 733
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I C+ G E+A +L + ++ K +V+ +M+ YCR M ++ ++ E
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++P+ NT+ LI K + AY M M+++G P
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPN 412
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS +CR A+ L + + + +++ +C+ G+ E +M ++E
Sbjct: 349 MISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T++ ++ K+ AY+ + + G ++ + LI K +AL
Sbjct: 409 FSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQAL 468
Query: 121 CL 122
L
Sbjct: 469 VL 470
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ C+ G +EA + + + K D + N ++ + R +E I+ R+++
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP +++ LIK K + + AY + +M +K +P+ CS L+ L + + AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556
Query: 121 CLQH 124
L
Sbjct: 557 NLWQ 560
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G E A + R + + +V+ + ++ C+ + + ++ +
Sbjct: 85 LVTGLCRAGKIETALEFFRKMDDRCSP-NVITYSVLIDGLCKANRVSQAVELLESMKARG 143
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T+ IL+ KE A+ + +M G P +SL+ L + R S+AL
Sbjct: 144 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 203
Query: 121 CL 122
L
Sbjct: 204 AL 205
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDK--YDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
++ R G E A L F+ D+ +DV+ N ++ CR G +E+ + RK+D+
Sbjct: 51 LLDGLFRTGKLERAMAL---FQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD 107
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SP+ T+ +LI K A + M +G P+
Sbjct: 108 -RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 147
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G ++A + D K D+++ N ++ C+ ++ I ++R+
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I + A R ++ + +G P+ L S+LI L K EA
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343
Query: 121 CLQHV 125
L V
Sbjct: 344 DLYEV 348
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + + G E+ + L +++E+ + YD + N++L +C+ G +E ++R + E
Sbjct: 319 MLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEG 378
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTM-----VDMHKKGHQPEEELCSSLIFHLGKMR 114
+P N++ I+ + +++ A+ M V KG +P+ ++ SS++ LG R
Sbjct: 379 KTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNR 437
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ C +AK+L + + K D + +M+ + G+ + +++ K+ E+
Sbjct: 488 LIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAHS 117
I D + L+ + A + + +M KG P+E LC+ L+ + LG +
Sbjct: 548 IELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNI---D 604
Query: 118 EALCLQH 124
EA+ LQ+
Sbjct: 605 EAIELQN 611
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +E+ L + + + DV+ N+++ ++C+ M R++ +
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ ++ LI KE M +A + VDM + G P E SSLI
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G A+ L + D+V N+++ Y + G ++ + + ++ +
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ LI F K K + A+ +M K +P S+LI
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLI 244
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ + A Q ++ D+V N+ML A C+ G +++ + ++ +L
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I K A + +M KG +P+ SSLI L + EA+
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAI 281
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C +A +L + ++ K DVV N ++ C+ G ++ I + +
Sbjct: 22 LIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYG 81
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T +I+++ +M A + + +M +KG P
Sbjct: 82 SQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119
>gi|115482834|ref|NP_001065010.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|31432949|gb|AAP54520.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|62733610|gb|AAX95727.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639619|dbj|BAF26924.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|125575336|gb|EAZ16620.1| hypothetical protein OsJ_32092 [Oryza sativa Japonica Group]
Length = 507
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ + G F+EA++ D + +V NSM+C C G+ + +++ ++
Sbjct: 398 MITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRG 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+P++ + L+ R A + M KGH
Sbjct: 458 CTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGH 493
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G + A +L + ++ K D+V N++L C E +M K+ +
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 180
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D +TF+ +I ++ ++ + + A M +KG P S++I L K +AL
Sbjct: 181 RLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQAL 240
>gi|357157771|ref|XP_003577908.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Brachypodium distachyon]
Length = 512
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + G F + + + E + NS+L A R GD+ + V R + +
Sbjct: 411 LINGFSKAGLFHKVVGMVKLAERLDVPANTSFHNSVLAACARAGDLVEMERVFRHMKHVQ 470
Query: 61 ISPDYNTFHILIKYFRKEKM 80
+PD T+ IL++ +RKE M
Sbjct: 471 CAPDATTYSILVEAYRKEGM 490
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G E+A++L + +A + D V N++L +C+ G M ++R ++
Sbjct: 239 LISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ LI + + Y A+ +M K+ +P+ L + LI L K +AL
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 121 CL 122
L
Sbjct: 359 KL 360
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G E+A +L R +K D N+++ A C G +E + ++ E
Sbjct: 344 LIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T ILI + + A +++ K G P ++LI L K EA
Sbjct: 404 SFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEAR 463
Query: 121 CLQHVKDIAKDRCAMPFMR 139
L H ++ R A F+R
Sbjct: 464 LLLHKMEVG--RPASLFLR 480
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 8 GGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNT 67
G + K LA F + D+V N ++ +CR GD++ + ++ L +SPD T
Sbjct: 496 GSILKAYKNLAH-FADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVT 554
Query: 68 FHILI----KYFRKEKMYMLAY 85
++ LI + R+E+ + L Y
Sbjct: 555 YNTLINGLHRVGREEEAFKLFY 576
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AFCR G + A + + D+V N++L C+ G + + + KL E+
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SP+ ++++ + + A +++M G P+E +S+I
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS CR G +EA +L D + VV N +L +C+ +E I+V+ +
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 61 ISPDYNTFHILIK 73
P+ T+ +LI+
Sbjct: 539 CRPNETTYTVLIE 551
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++ A G +EE ++L + F K D +VV + ++ CR G +E +++++ + E
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD ++ LI F +E +A + M G P+
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A ++ R+ E K + DV+ N +L A G E +M K+
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ T+ ILI ++ A + M +KG P+
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G E+A + D + V N ++ Y + G+M S + V +++
Sbjct: 305 VISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRR 364
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI + + A RT +M + QP S +I K +EAL
Sbjct: 365 CPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEAL 424
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV ++++ YCR G ++ + ++ + I P+ +TF I+I F K+ A R +
Sbjct: 368 DVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFL 427
Query: 89 VDMHKKGH-QPEEELCSSLI 107
+++ + P +C+ +I
Sbjct: 428 KELNMRTDIAPRAFICNPVI 447
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FC G EA + + E K + ++ N+++ AYC++ +E + ++
Sbjct: 345 LIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKG 404
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I TF+IL+ + ++ + + M +M G +P + + LI GK + S+
Sbjct: 405 IKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSD 462
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 6 CRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDY 65
C+ G +A +L ++ +++ K DVV N+++ A + +E I V R++ E P+
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 66 NTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
T + +IK ++ AYR + +M K+G QP+
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPD 328
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 51/106 (48%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ CR C EA Q + ++ + + NS++ A C+ G+M + +++ + + +
Sbjct: 536 INGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGL 595
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T +ILI +E + ++DM G P+ +++I
Sbjct: 596 VPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTII 641
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G + L D + D V N+++ AYCR DM S ++ M K+
Sbjct: 605 LIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAG 664
Query: 61 ISPDYNTFHILIKYFRKEKM 80
PD T++I + + M
Sbjct: 665 CEPDIFTYNIWMHSLCRNHM 684
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA C+ G EA +L ++ D+ N ++ CR G ++ V +++ +
Sbjct: 570 IISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNG 629
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
++PD T++ +I + + + A M M G +P+
Sbjct: 630 LTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPD 668
>gi|242053243|ref|XP_002455767.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
gi|241927742|gb|EES00887.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
Length = 558
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A CRG E A+ + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 214 LVAALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQDALHLFGVMPYRR 273
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD + IL+ K A R M D +G+ E +L
Sbjct: 274 VPPDLVSHTILMDGLCKAWRLNEA-RRMFDRMVQGYCNEGQL 314
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
N ++ +CR + + + V ++ + P+Y+T+ LI + + MV+M +
Sbjct: 407 NMIVDCFCRCDNPKEALDVKVEMTTREVKPNYDTYQALITCLCRLGKSLAGQSIMVEMIE 466
Query: 94 KGHQPEEELCSSLI 107
P E +C++L+
Sbjct: 467 SDFHPNEAICAALV 480
>gi|89257471|gb|ABD64962.1| PPR repeat containing protein [Brassica oleracea]
Length = 345
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL---- 56
+I+ FC G +EA +LA+ + V + +L C+ G+ME + ++ ++
Sbjct: 74 LINGFCNAGKVDEAWKLAKGMSEHGCVLNTVTYSRILEGVCKCGEMERALELLTEMEKEE 133
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
D ISP+ T+ ++I+ F ++K A + M +G P S LI
Sbjct: 134 DGGFISPNAVTYTLVIQAFVEKKRVQEALMVLDRMGDRGCSPNRVTASVLI 184
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G + EAK+L D E + K +V ++ + G ++ ++ ++ +
Sbjct: 262 LMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRR 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD+ ++IL+ + E AYRT+ +M KG +P
Sbjct: 322 IKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPN 360
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
VV NS++ CR DM ++ + + I P+ TF +L+K Y A + M
Sbjct: 221 VVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMF 280
Query: 90 DMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
DM +G +P L+ LGK EA L
Sbjct: 281 DMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKIL 313
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + ++ S + A C+ GDM+ V+ ++ ++
Sbjct: 695 LIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVG 754
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ P+ T+ LIK + K + A ++ +M G +P+E L+ L
Sbjct: 755 LKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSL 804
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + R+ + + + N ++ + R GD+ +M+++ E
Sbjct: 660 LLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDG 719
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ +T+ I K A + + +M G +P + ++LI K AL
Sbjct: 720 VPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRAL 779
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EEAKQL ++ AK D + ++ +C +E ++ + A
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Query: 61 -ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I PD T+ I++ + + K ++ A + +M + P SSLI L K
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 412
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G E+A ++ E + +VV +S+L C+ GD++ + + R++
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 254
Query: 61 ISPDYNTFHILI 72
P+ T+ LI
Sbjct: 255 CVPNVVTYTTLI 266
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C EEA L + K + V NS++ A CR GDM+ ++ +
Sbjct: 437 VIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 496
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE-------EELCSSLIFHLGKM 113
+ P T+ L++ F + +AY M +K + E+ S+LI L K
Sbjct: 497 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKA 556
Query: 114 RAHSEALCLQHVKDIAKDRC 133
R +A+ + V+++ C
Sbjct: 557 REIDKAMAV--VEELRSREC 574
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I+ FC+ G + A ++ R+ + DVV S++ CR G M+ ++R++
Sbjct: 51 VINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK 110
Query: 60 AISPDYNTFHILI 72
+ PD TF LI
Sbjct: 111 GVEPDKFTFSALI 123
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
+I+ CR EA +L ++ E + D K DVV +++ +C++G++E + ++ ++
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
P+ T+ L+ K A M KG P ++LI
Sbjct: 217 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI---------- 266
Query: 118 EALCLQHVKDIAK 130
LC H D A+
Sbjct: 267 HGLCAAHKVDAAR 279
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DE 58
+++ C+ +A ++ ++ + K D+V ++++ +C+ G+M+ ++R++
Sbjct: 15 VVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTR 74
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
++PD T+ ++ ++ A + +M KG +P++ S+LI R E
Sbjct: 75 DGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDE 134
Query: 119 ALCLQHVKDIAKDRCAM 135
AL L K+I C +
Sbjct: 135 ALKL--YKEILTSSCRL 149
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G + A L + E K +++ N ++ +C G + ++R + +
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ TF +LI F KE A +M +G P+ +SLI
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 473
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +++ +L RD + +VV + ++ ++ + G + + +++
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 461
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQP 98
I+PD T+ LI F KE ++ MVD M KG P
Sbjct: 462 IAPDTITYTSLIDGFCKEN-HLDKANQMVDLMVSKGCDP 499
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +EA + + E + + + N ++ AYC+ +E + ++ E
Sbjct: 360 LIKMFCDEGLKKEALIIQSEMERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKG 419
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ P T++IL+ + + + +++MH G QP + LI G+ + SE
Sbjct: 420 LKPTIVTYNILMDAYSRRLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSE 477
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ +EA+ L EAK + + N+++C CR G + + +++ +
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 61 ISPDYNTFHILIKYF---RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P T++IL+ R+E A M +KG P+ S+LI LGK
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 483
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 1 MISAFCRGGCFEEAKQL-ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
++S C GG +A+ L R +A Y DVV N++L +C+ G ++ + + +
Sbjct: 91 LLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVGKLDEALKIFDGAVKR 149
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T++ LI F K A R + M + P+ +SL+ L K
Sbjct: 150 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK 202
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S+ C+ G ++A +L + + DV+ N M+ + GD++S ++ +
Sbjct: 535 LLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SPD T+ LI F K A M G +P+ +C S++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVL 641
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G +EA L ++ + K + D+++ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ F K A M ++G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 121 CL 122
L
Sbjct: 338 QL 339
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G E+A QLA + + + +V ++ A+C+ G M+ + +++++
Sbjct: 183 VIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKG 242
Query: 61 ISPDYNTFHILIKYF 75
+ D + LI+ F
Sbjct: 243 LEADLIVYTSLIRGF 257
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ EEA+++ + E + +VV N+++ C+ +E +M ++
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD T++ L+ YF + A + M G +P+ +LI L K
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSK 608
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 1 MISAFCRGGCFEEA-----KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK 55
+I C+ G EEA + + RDF + V N+++ C+ +E + R
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSP-----NTVTYNTLISTLCKENQVEEATELARV 411
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
L I PD TF+ LI+ + LA +M KG P+E + LI L
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471
Query: 116 HSEALCLQHVKDIAKDRCA 134
EAL L +K++ C+
Sbjct: 472 LEEALSL--LKEMESSGCS 488
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ EEA QL + K D NS+L +CR GD++ +++ +
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K LA R + + KG + + +I L + + SEA+
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651
Query: 121 CL 122
L
Sbjct: 652 RL 653
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G EEA L ++ E+ +VV N+++ +C+ +E + +++
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
IS + T++ LI K + A + M M +G +P++ +SL+
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 31 VLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVD 90
V +N ++ YC+ G +E V+ + ++ PD TF+ L+ + A +
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341
Query: 91 MHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M ++G P+ +SLIF L K+ EA+
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAV 371
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMR--KLDE 58
+++ FCR G ++A + + + + D V +++ + G +E ++R +L
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ ++P T++ +IK +EK A R +M +KG P+
Sbjct: 627 MVLAP--QTYNPVIKALFREKRTSEAVRLFREMMEKGDPPD 665
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G + A ++ + D+ NS++ C+ G++E + ++ ++
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T++ LI KE A + KG P+ +SLI L H A+
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441
Query: 121 CL 122
L
Sbjct: 442 EL 443
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA QL D A + D V +++ YCR GD+ + + +++
Sbjct: 257 VIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGG 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P T++ +I+ ++ + +M + Q + C++LI K
Sbjct: 317 MVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAK 368
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 1 MISAFCRGGCFEEAKQ-----LARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK 55
+I FC+ +EAK+ + R F Y + + ++ +C+ + ++V+ + +
Sbjct: 397 LIHGFCKAKELDEAKEALFEMMGRGFSPNYS-----VFSWLVDGFCKKNNTDAVLLIPDE 451
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF-HL--GK 112
L + + PD + + LI+ K+ + LA + + M KG + + + ++L + HL GK
Sbjct: 452 LIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGK 511
Query: 113 MRAHSEAL 120
+ A S+ L
Sbjct: 512 VAAASDIL 519
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + + G F++A +L + + K V N+ML AY R+G V + +
Sbjct: 51 MISCYGKAGFFQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQDEG 110
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SPD T+ LI + + + A + MH++G P + L+F GK
Sbjct: 111 YSPDSYTYLSLICAYTNCQRFQEAEDLLKRMHRQGLAPGLVHFNHLVFAFGK 162
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS + + + A Q+ + D ++M+ Y + G + + ++ +
Sbjct: 16 MISVYGKARELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGFFQDAAKLFSRMQQEG 75
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T++ ++ + + ++ A DM +G+ P+ SLI
Sbjct: 76 IKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQDEGYSPDSYTYLSLI 122
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G EA ++ E+ DVV N+++ +C G ++ +H +++++
Sbjct: 282 VLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKG 341
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ +T+++LI F + M LA DM G
Sbjct: 342 CLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDG 376
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FCR G E A +L D A+ + + ++ CR GD++ + V ++ +
Sbjct: 527 VITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKG 586
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
I PD ++ L+ +E+ +
Sbjct: 587 ILPDLFIWNSLLLSLSQERHF 607
>gi|297723907|ref|NP_001174317.1| Os05g0275100 [Oryza sativa Japonica Group]
gi|255676205|dbj|BAH93045.1| Os05g0275100, partial [Oryza sativa Japonica Group]
Length = 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+++ NS++ C++G + +++ KL ISP+ T++ LI + KE A++
Sbjct: 43 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 102
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
M ++G QP S LI+ L EA+ L
Sbjct: 103 QKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKL 136
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G A +L + +VV N+++ +CR ++ V ++ +
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T++ LI + ++ + +A+R DM G Q + ++LIF L K +A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA- 397
Query: 121 CLQHVKDIAKD 131
Q VK++ K+
Sbjct: 398 -AQFVKELDKE 407
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S +CR G ++ +L +D E + V N+++ +C G + S + + + +
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ TF+ LI F + A + +M P ++LI
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 57/118 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FC G +A L + E K +V++ N+++ A+ ++ +E V ++
Sbjct: 335 LIKSFCDEGLKSQALILQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKG 394
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ P +F+IL+ + + + + +V+M G +P + + LI G+ + S+
Sbjct: 395 VKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQKKMSD 452
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + EEA+ + + ++K K N ++ AY R E V ++ ++ ++
Sbjct: 370 IMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMG 429
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ ++ LI Y R++KM +A + M K G +P ++LI
Sbjct: 430 LEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKNGIRPTSHSYTALI 477
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DVV N+++ A C + + ++ I+PD TF ILIK F +E +A + +
Sbjct: 323 DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLL 382
Query: 89 VDMHKKGHQPEEELCSSLIFHL---GKMR-AHS 117
M G P+ L ++++ HL GKM AHS
Sbjct: 383 DQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHS 415
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
IS C+ F ++L D + D+ N L C ++ + V++ + E
Sbjct: 86 ISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGR 145
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD T+ I+I + + A +M +KG P+E+ C +L+ L
Sbjct: 146 EPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGL 194
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G AK+L D VL +++ C+TG M V + E
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESG 424
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I+PD +++ LI + A DMH G P+E
Sbjct: 425 ITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDE 464
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C + A +L + K DVV ++ A+ R G ++ ++ L
Sbjct: 330 IIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLG 389
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++ + K +A+ DM + G P+ ++LI L + SEA+
Sbjct: 390 LLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAM 449
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDV--VLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I F R G EA QL FE+ K V V ++L A C++ +E + + ++ ++
Sbjct: 272 IIQGFIRCGRLAEATQL---FESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQ 328
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ D T+ L+ F K A +M K G P+ + + LI LGK E
Sbjct: 329 GGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDE 388
Query: 119 ALCLQHVKDIAKDRCAMPFMRKFFI 143
AL L ++D+ + + MP R + I
Sbjct: 389 ALEL--LEDMNR-KGIMPDCRTYNI 410
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 11 FEEAKQLARDFEAKYDKY------DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPD 64
F +A + A+ E Y+ D V+ N ++ + G ++ + ++ ++ I PD
Sbjct: 345 FGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404
Query: 65 YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQH 124
T++I+I Y AY M ++ H P+ ++L+ L K+R EA L
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL-- 462
Query: 125 VKDIAKDRCAMPFMRKF 141
++ ++C MP + F
Sbjct: 463 FDEMQANKC-MPDLTTF 478
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 12 EEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKL-DELAISPDYNTFH 69
E+A L D D DVV N+++ YC+ GD + + + R+L E + P+ +F
Sbjct: 106 EQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFD 165
Query: 70 ILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKMR 114
L+ + K A +M G + + +C++LI LG +R
Sbjct: 166 TLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLR 213
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G E+A + + + + N+++ +CR+G ++ + + + E +
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ IL+ F + +A + +M ++GH P
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTP 578
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G +EA QL + DVV N+++ YCR G M+ ++ ++
Sbjct: 324 LMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNG 383
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
I PD T ++++ F ++ + A T+V++ + + E+L LI L
Sbjct: 384 ICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVAL 433
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ E+A QL + K + +L Y ++ D E V +++ +
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + + I+I+ + + +A+ + ++ K G P+ + SSLI L KM +A+
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685
Query: 121 CL 122
L
Sbjct: 686 GL 687
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS CR G EEA + D +++ C+ G ++ ++ ++
Sbjct: 286 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSG 345
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ P+ + L+ F KE A+ + +M G QP + + +LI L K+
Sbjct: 346 LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKI 398
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+GG +EAK L + K +VV+ +++ + + G ++ ++
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ + LI+ K A + + +M K GH+P+
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +E K + + K +VV S++ YC ++ ++ + +
Sbjct: 273 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG 332
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ILI F K K A +MH K P+ +SLI L K+ S AL
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392
Query: 121 CL 122
L
Sbjct: 393 KL 394
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ +EA L ++ K+ DVV NS++ C+ G + + ++ ++ +
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ PD T+ ++ K A + + +G +P
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG E+A + D K V M+ +C G + + ++ K+ + +
Sbjct: 448 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNS 507
Query: 61 ISPDYNTFHILIK 73
PD T+ I+I+
Sbjct: 508 CIPDAVTYEIIIR 520
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 44/96 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + + D++ +S+L A C+ ++ I ++ KL +
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQG 437
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
I P+ T+ ILI K A+ D+ KG+
Sbjct: 438 IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+++ C+ G +EA ++ AK K D+V ++L Y G +I + + I
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D F+ILI + K M A +M ++G P+ S++I +M ++A+
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L + K+ + +LN+M+ A + E + +
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ +T+ ++I K+ A M K G P L + +I
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++ C+ G +A + ++ DV+ S++ YC G M+ ++ ++ +
Sbjct: 552 VINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG 611
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ D T+ L+ + K +M +KG +P
Sbjct: 612 VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A L + K D+V N+++ +C+ G+ME + +
Sbjct: 217 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 276
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P++ T+ ILI + A+R M +KG +P C+++I
Sbjct: 277 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 323
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+CR G EEA ++ K K + N+++ C+ G ++ ++ +
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ L+ + + A +M ++G P+ SSL+ + R +AL
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C G EA +L K K +V N+++ YCR+GD + ++
Sbjct: 287 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346
Query: 61 ISPDYNTFHILIK 73
++PD+ +++ LI
Sbjct: 347 VAPDHISYNTLIN 359
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +A L + +K +VV ++++ + G ++ + + K+
Sbjct: 233 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISEN 292
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+IL+ F K A + + +MH +G P SS++ +AL
Sbjct: 293 IKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL----------DAL 342
Query: 121 CLQHVKDIA-------KDRCAMPFMRKFFIF 144
C H D A KD+ P M + I
Sbjct: 343 CKTHRVDKAVALLTKLKDQGIRPNMHTYTIL 373
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G A +L + + ++V +S+L A C+T ++ + ++ KL +
Sbjct: 303 LVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQG 362
Query: 61 ISPDYNTFHILI 72
I P+ +T+ ILI
Sbjct: 363 IRPNMHTYTILI 374
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A A +++ + +++ C+ G+ + + ++R++D
Sbjct: 163 LIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKL 222
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMR 114
+ P+ + +I K+K A+ +M KG P S+LI F +GK++
Sbjct: 223 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLK 279
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C G +EA ++ D E D+V+ +M+ AY ++G M++ +++ KL E
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 61 ISPDY-------------NTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSL 106
PD H I YF EK + Y ++D + K+G E E S
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSK 428
Query: 107 IFHLG 111
I G
Sbjct: 429 ISEAG 433
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 59/114 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A+C+ G ++A E + + + + N+++ +C TG+++ +R++ E
Sbjct: 366 LVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKG 425
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
+SP T++ LI + ++ ++ + + +M K G +P SLI L K R
Sbjct: 426 VSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ R G ++A+ L K DV+ NS++ Y ++ + + + + K+ L
Sbjct: 541 LINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILG 600
Query: 61 ISPDYNTFHILIKYFRKEKMYML--AYRTMVDM 91
I P TFH LI RKE + + ++ M+ M
Sbjct: 601 IKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQM 633
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G E+A+++ + N ++ AYC+ GD++ I +++E
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ P+ TF+ +I F + A + M +KG P E +SLI G+
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQ 442
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS FC G + A+ R K V NS++ Y + G + ++D+
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ ++ LI K++ + A + DM +G P E+ + LI
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLI 507
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI ++ G +A L + + D V NS++ AY R + + H++ +
Sbjct: 645 MIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKG 704
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P +T++ILIK K + AY +M ++G +C LI
Sbjct: 705 LVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +M+++
Sbjct: 304 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREG 363
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 364 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKAL 423
Query: 121 -CLQHVK 126
C + +K
Sbjct: 424 SCFEEMK 430
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVIHVMRKLD 57
+I+ C+ G +A + D + +VV N+++ YC R G M +++++
Sbjct: 236 VINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
E +SP+ TF++LI F K++ A + +M +G +P +SL+
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G EE K L + + + K D V N ++ A+C + + ++ ++ +
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ P + T++IL+ + E A M K+G
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G EEA L + K + N ++ +CR G ME V +++ ++
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ D T++ILI + ++K A R + +M KG +P
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKP 511
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 56/125 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ A ++ + +++ K VV NS++ C G + ++ ++
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI + K+K+ A ++ K+G P ++L+ K EA
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428
Query: 121 CLQHV 125
LQ V
Sbjct: 429 LLQKV 433
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C G A L + E + +VV N ++ YCR G +E ++ ++ E
Sbjct: 519 LLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKG 578
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
+ P+ T+ I+ KE+M + ++ H
Sbjct: 579 LIPNRTTYEII-----KEEMMEKGFLPDIEGH 605
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G EAK L + + K +V+ N+++ YC+ +E + + +
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 61 ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++P+ TF+ L+ K+ + E+ ++L + M++ KG P + LI
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQ-KVMLE---KGFLPNASTYNCLI 450
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S R G EEA R E D+ N +L RTG E + K+ +
Sbjct: 488 LMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSL 547
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD +++ ++ + M+ A + M +M +G + + SS++ +GK+ E
Sbjct: 548 IKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SAF + G + A +L + +A + ++L Y ++GD E + +++++ +
Sbjct: 208 LVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKG 266
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P T+ LIK K AY ++M K G +P+ L ++LI GK +AL
Sbjct: 267 CAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDAL 326
Query: 121 CL 122
L
Sbjct: 327 KL 328
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ + + G + E + + E + D V NS++ Y + G ++ V +++ +
Sbjct: 415 VLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRG 474
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P T+ LI + K M+ A+ +D + G +P+ L SS I L K
Sbjct: 475 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAK 526
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G +A + DF+ K DVVL +S + + G +E + ++ + E+
Sbjct: 485 LIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMG 544
Query: 61 ISPDYNTFHILIKYFRKEKM 80
I P+ T++ +I F K K+
Sbjct: 545 IKPNVVTYNTIIDAFGKSKV 564
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 41/90 (45%)
Query: 33 LNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
NS+L A R G +E + ++ L I D T++ I K LA + ++DM
Sbjct: 307 FNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDME 366
Query: 93 KKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
K +P S+LI K+ + EAL L
Sbjct: 367 AKNVKPNVVTYSTLIDGYSKLEKYDEALKL 396
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A C+ G E A Q+ D EAK K +VV ++++ Y + + + + K+ L I
Sbjct: 346 IDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGI 405
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
D ++ ++ + K Y +M G + + +SLI GK
Sbjct: 406 QLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGK 456
>gi|296416707|ref|XP_002838016.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633911|emb|CAZ82207.1| unnamed protein product [Tuber melanosporum]
Length = 635
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 19 RDFEAKYD----------KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
RD EA Y+ + LN+++ A+ R D++S +V + + + PD TF
Sbjct: 422 RDIEAAYEILLAQRKLKNSVHIAALNTIIAAFVRISDVKSAFNVYKVIPNFDLRPDLQTF 481
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
+ L++ ++ A + +M + G +P EE SL+
Sbjct: 482 NWLLRGAAEQGRKKFAMWVVAEMQEMGIKPGEETYESLVL 521
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +M+++
Sbjct: 702 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREG 761
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 762 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKAL 821
Query: 121 -CLQHVK 126
C + +K
Sbjct: 822 SCFEEMK 828
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G +EA L D V+ N ++ YCR GD+E + ++ E
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE-----EELCSSLIF 108
P+ T+ IL+K + +A +M KG QP+ +C+ LI
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 1378
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + G E A+ + A DV+ NS+L YC+ G+++ + + L
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI + + A +M ++G P +C+ I G + S A+
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLP--NVCTYTILMKGSLNVRSLAM 1348
Query: 121 C 121
Sbjct: 1349 A 1349
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G EA+++ + + V ++ AYCR G++ S RK+ E
Sbjct: 1441 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEG 1500
Query: 61 ISPDYNTFHILI 72
+ P+ T+++LI
Sbjct: 1501 VEPNEITYNVLI 1512
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G ++AK+L + + D + ++ A+C G + + +
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 1465
Query: 61 ISPDYNTFHILI-KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
+ P TF ++I Y R+ +Y AY M ++G +P E + LI L +M
Sbjct: 1466 LLPSAVTFTVIIHAYCRRGNLYS-AYGWFRKMLEEGVEPNEITYNVLIHALCRM 1518
>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
Length = 225
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 70 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 129
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI KE A + M +KG P+ ++LI L + EA+
Sbjct: 130 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 189
Query: 121 CL 122
L
Sbjct: 190 WL 191
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 54/116 (46%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
A C ++A L R + + DVV +++ C +++ + +M ++ E I P
Sbjct: 3 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 62
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ + L++ + K + + V+M +KG +P+ + + LI L K+ +A
Sbjct: 63 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 118
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A +L + + +VV+ +S+L YC++G E V V ++ E
Sbjct: 35 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 94
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I PD + LI K A+ M M ++G +P
Sbjct: 95 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 132
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGC-FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++ +C C EAK+ E + + DV SM+ + + G ++SV+ + + E
Sbjct: 243 VLNGWCNMVCSVREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEA 302
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ ++ K + A + M ++G P+ +SLI L K R EA
Sbjct: 303 GIVPDRKVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEA 362
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+C+ EEA+ L + + K + N ++ AY R E V ++ ++ +L
Sbjct: 388 LMKAYCKSNQIEEAEGLFVEMKEKSLQATTTTYNILMDAYSRRLQTEVVESLLLEMQDLG 447
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P +++ LI Y R++KM A + M + G +P ++L+F H +A
Sbjct: 448 IRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGIKPLSSSYNALLFAYAANGLHEKA 507
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC G +EA + + E + + + +++ AYC++ +E + ++ E +
Sbjct: 353 LINIFCSDGLKKEALIIQSEMEKRGIASNTSIYETLMKAYCKSNQIEEAEGLFVEMKEKS 412
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLG---KMRAHS 117
+ T++IL+ + + + +++M G +P + LI G KM +
Sbjct: 413 LQATTTTYNILMDAYSRRLQTEVVESLLLEMQDLGIRPSARSYNCLISAYGRQKKMSGKA 472
Query: 118 EALCLQHVKDIAK 130
E L+ +D K
Sbjct: 473 ENAFLRMKRDGIK 485
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C+ EEA+ + + + K + N ++ AYCR E V ++ ++ +L
Sbjct: 415 LINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLLLEMQDLG 474
Query: 61 ISPDYNTFHILIK-YFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ +++ LI+ Y +++KM A + M G P +SL+
Sbjct: 475 LRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTSSTYTSLL 522
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 52/118 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G EA + E K + + N+++ AYC+ +E V ++ E
Sbjct: 380 LIKIFCDNGLKTEALIIQSAMEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEMKEKG 439
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+S T++IL+ + + + +++M G +P + LI G+ + SE
Sbjct: 440 LSATAMTYNILMGAYCRRLQPEVVESLLLEMQDLGLRPNARSYNFLIRVYGQQKKMSE 497
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +E+K L K K DVV+ + ++ YC G+++ + + +
Sbjct: 226 LIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
++PD +++I+I K K A + +M K P+ SSLI L K+
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +EA L + A+ DV+ +++C +C G + ++ ++
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++ LI KE + + M KKG +P+ + S L+
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILM 262
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+G +EA L R+ K D V +S++ C+ G + +++ + +++
Sbjct: 296 IINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ T++ L+ K + A + M ++G QP + ++LI L K
Sbjct: 356 QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 407
>gi|326528431|dbj|BAJ93404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + C+ G EA +L K DVV+ +++ A+C+ ++ + + RK+
Sbjct: 167 MLDSLCKNGLVPEAMKLFGLMREKGAIPDVVIYTAVVEAFCKGAKLDDAVRIFRKMQGNG 226
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ ++I+ K A V+M + GH P L+ + KM+ E
Sbjct: 227 VIPNAFSYWLIIQGLCKGDRLDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEGE 286
Query: 121 CL 122
L
Sbjct: 287 NL 288
>gi|225439358|ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A CR G EEA L + + D + S++ R G ++ + + + ++ I
Sbjct: 845 IRALCRAGRLEEALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGI 904
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P + + LI +F KEK A T M ++G +P S+LI
Sbjct: 905 HPTVHVYTSLIVHFFKEKQMRKALETFQKMKEEGCEPTIVTYSALI 950
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAK---YDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLD 57
M+ +FC G EA +L RD K + D L LC R D ++ +M+K
Sbjct: 351 MLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVKGLCRADRITDAAEIVDIMKKRK 410
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
+ D + I+I + + A+ + M + G+ P + L+ HL ++ +
Sbjct: 411 VV----DAKVYGIIISGYLRRNDIPKAFDVLQTMTESGYLPTISTYTELMQHLFRLNEYQ 466
Query: 118 EA 119
+
Sbjct: 467 KG 468
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 1 MISAFCRG-GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++ +C G EA+++ + K+DVV +SM+ Y + G + V+ + ++ +
Sbjct: 221 VLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE 280
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDM-HKKGHQPEEELCSSLIFHLGKMRAHSE 118
+I PD ++ +I K A M M +KG +P +SLI L K R E
Sbjct: 281 SIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEE 340
Query: 119 ALCLQHVKDIAKDRCAMPFMRKFFIF 144
A + V D ++ P +R + F
Sbjct: 341 A---KQVFDEMLEKGLFPTIRTYHAF 363
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + + K D+ S + A + GDM + +++ L
Sbjct: 736 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 795
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LIK + + + A +M G +P++ + L+ L + +EA
Sbjct: 796 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAY 855
Query: 121 CLQHVKDIAKD 131
V I K+
Sbjct: 856 IYSGVMTICKE 866
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ F + + A + D + K DV+L N+++ A+C G+M+ I ++++ +L
Sbjct: 526 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLR 585
Query: 61 ISPDYNTFHILIKYFRK 77
P TF +I F K
Sbjct: 586 HRPTTRTFMPIINGFAK 602
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +++++ +
Sbjct: 701 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 760
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 761 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 820
Query: 121 -CLQHVKDIA 129
C + +K +
Sbjct: 821 SCYEEMKAVG 830
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ ++A L ++ E K + +VV +S++ C G ++ + E
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ TF+ LI F KE ++ A + DM K+ P+ +SLI
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L EA + DVV+ N+++ + C+ ++ +++ ++++
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ LI + A + + DM +K P ++LI
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF + G F EA++L D + D+ NS++ +C M + +++ E
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC----MHDRLDKAKQMFEFM 315
Query: 61 IS----PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLG 111
+S PD +T++ LIK F K K +M +G + ++LI FH G
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
NS+L YC +G I V +++ + PD T++ L+ Y K M A + M K
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336
Query: 94 KGHQPEEELCSSLI 107
+GH+P +L+
Sbjct: 337 RGHKPNSATYGTLL 350
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L K + V N+M+ YC+ G +E + R++
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++P T+ +++ + + A + M K G
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSG 618
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G E+A Q K DVV N+++ C G +E + + E
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
D T++ LI+ K+ A R DM +G QP+
Sbjct: 626 KKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G E+A +L + K K DV+ N+++ A C+ D+++ + ++
Sbjct: 601 LMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG 660
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
+ PD T+++L+ + + A + + +++ G
Sbjct: 661 LQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
CF+ +A L + K K +V N ++ CR G +E + + + E ++P
Sbjct: 359 ACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTP 418
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI K A+ M +M + G + + ++L+++L K + + EA
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G EEA + DV+ N+++ A C+ G++ +M ++
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + L+ KEK Y A + ++G P+E +++ K AL
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL 510
Query: 121 CL 122
CL
Sbjct: 511 CL 512
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + + G ++A QL + +K + DV+++NS++ + G +++ + +L L
Sbjct: 521 LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLK 580
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++IL+ KE + A M + G P +SL+ L K A AL
Sbjct: 581 LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLAL 640
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++AK+L A D V +++ + + GD+E+V +++
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ ILI+ K A+ + M KG P +++I L K R EAL
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430
Query: 121 CL 122
L
Sbjct: 431 EL 432
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G + A + K ++ N+M+C + ++ + ++ ++ L
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ + I Y+ K A T M K+G P C++ ++ L + SEA
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEA 499
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ F + G + A +L + + + D+ ++ C TG ++ + +L
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLG 111
+ PD +++ +I K + A +M +G P+ ++LI HLG
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLG 1052
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
N+ L TG + + L + +SPD T+++L+K + K A + + +M
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 94 KGHQPEEELCSSLIFHLGK 112
KG +P+ + +SLI L K
Sbjct: 544 KGCEPDVMIINSLINTLYK 562
>gi|326499952|dbj|BAJ90811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ + C+ G EA +L K DVV+ +++ A+C+ ++ + + RK+
Sbjct: 167 MLDSLCKNGLVPEAMKLFGLMREKGAIPDVVIYTAVVEAFCKGAKLDDAVRIFRKMQGNG 226
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ ++I+ K A V+M + GH P L+ + KM+ E
Sbjct: 227 VIPNAFSYWLIIQGLCKGDRLDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEGE 286
Query: 121 CL 122
L
Sbjct: 287 NL 288
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G F+ QL + +V + NS++ A + G ++ +MR + E+
Sbjct: 281 LIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMG 340
Query: 61 ISPDYNTFHILIKY 74
PD T++ILI +
Sbjct: 341 CEPDITTYNILINF 354
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G EE ++L D +VV N ++ YC+ GD++ V +L
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKG 270
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P T+ LI F K + + + + +M+ G ++ +S+I
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSII 317
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G +EA L D V+ N ++ YCR GD+E + ++ E
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE-----EELCSSLIF 108
P+ T+ IL+K + +A +M KG QP+ +C+ LI
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 1378
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + G E A+ + A DV+ NS+L YC+ G+++ + + L
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI + + A +M ++G P +C+ I G + S A+
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLP--NVCTYTILMKGSLNVRSLAM 1348
Query: 121 C 121
Sbjct: 1349 A 1349
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FCR G ++A+++ + K + V ++L C+ G ++ K +E
Sbjct: 379 VVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEW 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P T+ +++ FR+E + +V M +KG P + LI L K R +EA
Sbjct: 439 WTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEA 497
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +EA + R+ E K + D V ++++ ++C G M ++ ++
Sbjct: 309 LIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ ++ F + A + M M+K +P ++L+ L K+ SEA
Sbjct: 369 CQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA 427
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+GG EA ++ + K K DVV +++ +CR + I +M ++ EL
Sbjct: 259 LIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELG 318
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P L+ RK+ AY +V + + G P + ++LI L K
Sbjct: 319 FVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK 370
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FC+ G + A+ + + NS++ +C+ GD+ + + K+
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P TF LI + K+ A++ +M++K P ++LI+ L +EA
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 46/102 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA ++ + D + ++++ +CR+GD+ + + + +
Sbjct: 783 LIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG 842
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD F++LI A+ DM +G +P + L
Sbjct: 843 VEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQIL 884
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ E+A +L R+ K V +++ C T +M + ++ E
Sbjct: 469 LISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK 528
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I P T++++I+ + K A+ + DM G P+ LI L G++ A
Sbjct: 529 IKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAK 588
Query: 118 EALCLQHVKDI 128
+ + H K++
Sbjct: 589 DFIDDLHKKNL 599
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E K+L K + NS++ YC +M+S + + +
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK K + A +M +KG + S+LI L K + EA
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699
Query: 121 CLQHVKDIAKDR-CAMPFMRKFFI 143
L H D+ K+ A P + F+I
Sbjct: 700 KLFH--DMRKEGFTAEPDVYNFYI 721
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 42/75 (56%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G ++A + D +A K DV +++ A C++G+++ +++++ +
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569
Query: 61 ISPDYNTFHILIKYF 75
I P T+++L+ F
Sbjct: 570 IKPTIVTYNVLMNGF 584
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +EA+++ ++ A+ D V ++ YC+ G M V + +
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P+ T+ L K+ A + +M KG + +SLI L K
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCK 516
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G EA Q+ + +VV ++ C+ GD+++ ++ ++
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM----RAH 116
+ + T++ LI K A RTM DM G +P+ ++LI L K RAH
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
C+ G + A +L + K + + NS++ C+ G ++ + M +D + P
Sbjct: 478 GLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKP 537
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
D T+ LI K A+ + +M G +P
Sbjct: 538 DVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKP 572
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G + A L ++ K +V N ++ +C +G +E ++ + E
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ L+K +
Sbjct: 605 IHPNATTYNSLMKQY 619
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+GG +EA ++ R+ + + D + AYC ++ SV V+ ++
Sbjct: 258 LLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYD 317
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ P+ T++ +IK K AY+ + +M ++G P+
Sbjct: 318 LVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPD 356
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G E+A QL + + D N++L +C ++ ++ + +
Sbjct: 328 IIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDN 387
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++++L+K + + A M ++G P S +I L K + E
Sbjct: 388 CLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEA 447
Query: 121 C 121
C
Sbjct: 448 C 448
>gi|356498649|ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A CR G EEA L + + D + S++ R G +E + + + + I
Sbjct: 829 IRALCRAGKVEEALALHEEVGEEKFIIDQLTFGSIVHGLLRKGRLEEALAKVDVMKQNGI 888
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+P + F LI +F KEK A T +M G++P S+LI
Sbjct: 889 TPTIHVFTSLIVHFFKEKQVEKAIETFEEMLHSGYEPTIVTYSALI 934
>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 408
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G +A +L + + +++ NS+L A C+ +E I ++RK+
Sbjct: 318 LIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKG 377
Query: 61 ISPDYNTFHILIKYFRKE 78
I PD T+ IL K+
Sbjct: 378 IQPDAYTYTILTNGLFKD 395
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++SAFC+ G E K + + K D++ NS++ YC +++ ++ + +
Sbjct: 230 LVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRG 289
Query: 61 ISPDYNTFHILIKYFRKEKMY-MLAYRTMVD-----------------MHKKGHQPEEEL 102
++ + T ++ + KE + +AY +++D MH +G P
Sbjct: 290 VTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIIT 349
Query: 103 CSSLIFHLGKMRAHSEALCLQH---VKDIAKD 131
+S+++ L K+ + + L VK I D
Sbjct: 350 YNSILYALCKIHHVEKTIALLRKIKVKGIQPD 381
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ ++A L + AK DV N+M+ +C G ++ I + +
Sbjct: 160 IINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLEN 219
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ D TF+ L+ F KE + M K+G +P+ +SL+
Sbjct: 220 VEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLM 266
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FCR G ++A+++ + K + V ++L C+ G ++ K +E
Sbjct: 379 VVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEW 438
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P T+ +++ FR+E + +V M +KG P + LI L K R +EA
Sbjct: 439 WTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEA 497
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +EA + R+ E K + D V ++++ ++C G M ++ ++
Sbjct: 309 LIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKG 368
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ ++ F + A + M M+K +P ++L+ L K+ SEA
Sbjct: 369 CQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA 427
>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA QL RD A + D V +++ YCR GD+ +++ ++
Sbjct: 255 VIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARG 314
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P T++ +I+ ++ + +M ++ Q + C++LI
Sbjct: 315 MLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCNTLI 361
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G EA L EA+ V N+++ C G M+ V ++ ++DE
Sbjct: 290 LVDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERK 349
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D+ T + LI + K+ A + M + G Q ++ +LI K + EA
Sbjct: 350 VQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEA 408
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + G ++ L +D + DV N +L AY + G ++ + V+ ++
Sbjct: 92 LLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQ 151
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+ILI + +++ + + + + +P +S+I + G+ R +A
Sbjct: 152 CRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKA 210
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I ++ R F++ +Q+ + ++ NSM+ Y R E V+ K++EL
Sbjct: 162 LIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELG 221
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI-FHLGKMRAHSEA 119
P+Y T LI M A+ D K Q +EL +S HL + + EA
Sbjct: 222 FKPNYVTQECLI--------IMYAH---CDCVSKARQVFDELVTSQTKVHLSSLNSMLEA 270
Query: 120 LCLQHVK-------DIAKDRCAMP 136
C+ + D A +C +P
Sbjct: 271 YCMNGLHTEADRLLDTALQQCVVP 294
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+V N +L A+ + GD + V + + LDE +SPD T++ ++ + K M +V
Sbjct: 86 IVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLV 145
Query: 90 DMHKKGHQPEEELCSSLIFHLGK 112
M +P+ + LI G+
Sbjct: 146 RMKSTQCRPDVITFNILIDSYGR 168
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G EA+ L + + V +++ C+ GD +S ++++RK+DE
Sbjct: 16 LMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESH 75
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I D + +I K+ + A +MH KG P
Sbjct: 76 IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPN 114
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLARD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
MI C G + +A+QL RD E+ D DVV N+++ A+ + G + + R++
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDP-DVVTFNALINAFVKEGKISEAEELYREMLGR 179
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T++ LI F K A M KG P ++LI
Sbjct: 180 NIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLI 227
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF + G EA++L R+ + D + NS++ +C+ ++ H+ +
Sbjct: 156 LINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKG 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SP+ T + LI + K + + +M ++G P+ ++LI
Sbjct: 216 GSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLI 262
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +A+ L + K +V+ N M+ C G ++R + E
Sbjct: 86 IIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESN 145
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI F KE A +M + P+ +SLI K HS
Sbjct: 146 VDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCK---HSRLD 202
Query: 121 CLQHVKDIAKDRCAMP 136
+H+ D+ + P
Sbjct: 203 DAKHIFDLMVSKGGSP 218
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I CR GC E A +L RD + + N+++ +CR G++ ++ + I
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL 106
SP ++ ILI K+ A + +M + +P SSL
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSL 399
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ ++A L ++ E K + +VV +S++ C G ++ + E
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ TF+ LI F KE ++ A + DM K+ P+ +SLI
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L EA + DVV+ N+++ + C+ ++ +++ ++++
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ LI + A + + DM +K P ++LI
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF + G F EA++L D + D+ NS++ +C M + +++ E
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC----MHDRLDKAKQMFEFM 316
Query: 61 IS----PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLG 111
+S PD +T++ LIK F K K +M +G + ++LI FH G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
N +L A + + VI + K+ L IS + T++ILI F + LA + M K
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 94 KGHQPEEELCSSLIFHL--GKMRAHSEALCLQHVK 126
G++P SSL+ GK + + AL Q V+
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 108
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G + A + ++ D+V N +L A C+ G ++ + ++ +L
Sbjct: 362 LIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG 421
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP +++ +I K LA + +M KG +P+ C+S++ L + EA+
Sbjct: 422 CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAM 481
Query: 121 CLQH 124
H
Sbjct: 482 KFFH 485
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +A +L + K K DVV N ++ +C+ G ++ I ++KL
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD + +++++ +M A + + M +KG P
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLP 319
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+GG +EA + + + + DV+ N +L + C G + ++ +
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P TF+ILI + ++ + A + M K GH P + LI
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G + A Q+ E DV N ++ YC++G++E +R LD +
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIE---EALRVLDRMG 176
Query: 61 ISPDYNTF 68
+SP+ T+
Sbjct: 177 VSPNAATY 184
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G EEA R + + +++LC+ C G ++ + V+ + +
Sbjct: 155 LISGYCKSGEIEEA---LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK 211
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T +LI KE A + +M KG +P+
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPD 250
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C+ EE+ L + DVV +S+L +CR G + + R++ E+
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
+ P++ ++ +I K M A+ M +G + C+++ +F +GK +
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE 446
Query: 118 EAL 120
E
Sbjct: 447 EVF 449
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +EA L R+ K D+ N ++ C+ G M+S V R +
Sbjct: 505 LIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTG 564
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD T++ LI + K + + M+ G P+
Sbjct: 565 LIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPD 603
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AFC G EA+ L + +VV N+++ Y + D+ + ++ A
Sbjct: 225 VINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKA 284
Query: 61 ISPDYNTFHILI----KYFRKE 78
++PD TF+IL+ +Y R+E
Sbjct: 285 VAPDCTTFNILVAGHYRYGREE 306
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ R G E+ +L RD L N + C G ++ + + + E
Sbjct: 295 LVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKG 354
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P F+ +I + + + AY+ M K G P CSSLI L K+ EA
Sbjct: 355 ITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEA 413
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 3 SAFCRG----GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
SAF G G +EA + K + + NS++ +C +G ++ + + R++
Sbjct: 468 SAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMAR 527
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T +I+I KE A +MH G P+ ++LI
Sbjct: 528 KGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLI 576
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ FE+A+++ + + + DV N+ + +YC D V V+ ++
Sbjct: 321 LINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNG 380
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ T+ IL+ + K A M K G P+ SSL++ LGK
Sbjct: 381 CPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGK 432
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 35/66 (53%)
Query: 7 RGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYN 66
+ G ++A ++ D + DVV N+M+ C E+ + ++++++E + PD
Sbjct: 432 KAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQ 491
Query: 67 TFHILI 72
T+H L+
Sbjct: 492 TYHPLL 497
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R E+A ++ R+ + K +VVL NS+L G ++ + + +
Sbjct: 357 LLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSG 416
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
I PD TF +I F A T+ +M + G QP + +SLI GK +
Sbjct: 417 IKPDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQ 470
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +AKQ+ V+ N+++ YC+ D+ + ++
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD+ T++ LI K +M A +++M K G P E ++LI
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 38/72 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR +EA++L + + DVV N+++ A C GD + + +++++++
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 61 ISPDYNTFHILI 72
I P T H L+
Sbjct: 610 IRPTLRTCHTLV 621
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G EA + D K + + NS++ AY +GD E + ++ K+
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG 539
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+S T+++L+K + A + + +G +P+
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +GG E +L K +VV N +L CRTG M+ +M ++ +
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ PD T+ IL + + KKG CS L+ L K
Sbjct: 295 MLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCK 346
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ E A+++ + + +VV ++L Y GDM V +L +
Sbjct: 198 LIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHG 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ + K+ + A + M +M + G +P + +I K R EAL
Sbjct: 258 WLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEAL 317
Query: 121 CL 122
L
Sbjct: 318 NL 319
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D ++ Y + G + VM +++E + P+ T+ ++I + KE+ A +
Sbjct: 261 DATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLL 320
Query: 89 VDMHKKGHQPEEELCSSLI 107
DM +K + P LC +I
Sbjct: 321 NDMLEKKYIPNSALCCKVI 339
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G F +A +L D A+ + DV +++ C+ G+ + + RK+ E
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG 257
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ +I K++ A M KG P +SLI L EA
Sbjct: 258 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA L ++ + D+ + +L +C+ G + + R +
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ILI K + A + ++ +G QP ++ +++I L K EA
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEA- 561
Query: 121 CLQHVKDIAKDRC 133
L+ +++ +D C
Sbjct: 562 -LEAFRNMEEDGC 573
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G +A +L R ++ Y K ++V+ N ++ A C++ +++ + +L
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ P+ + +I KE + A +M + G P E
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 50/95 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +EA++L + + + +V + +++ C+ G ++ + R ++E
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ +++++I+ F + K A + + +M +KG
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ EAKQL + + D+V N+++ C+ G + + + +
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ IL+ F K+ A+R M +P + + LI + K R EA
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 526
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA + +AK ++ NS++ C ++ ++ L
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ TF +LI F KE A + M + G +P SSL+
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+ G +E A+ + ++ EA + + + + +L +Y G + V+R++
Sbjct: 367 LIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSG 426
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SPD + ++++I F K A T M +G QP+ ++LI K H++A
Sbjct: 427 VSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 485
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A G EEA+ + + + N++L Y +TG ++ ++ +++
Sbjct: 297 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 356
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPD +T+ +LI + + A + +M G +P + S ++
Sbjct: 357 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRIL 403
>gi|115474407|ref|NP_001060800.1| Os08g0107700 [Oryza sativa Japonica Group]
gi|113622769|dbj|BAF22714.1| Os08g0107700, partial [Oryza sativa Japonica Group]
Length = 374
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
NS+L YC +G I V +++ + PD T++ L+ Y K M A + M K
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336
Query: 94 KGHQPEEELCSSLI 107
+GH+P +L+
Sbjct: 337 RGHKPNSATYGTLL 350
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + + K D+ S + A + GDM + +++ L
Sbjct: 733 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 792
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LIK + + + A +M G +P++ + L+ L + +EA
Sbjct: 793 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 852
Query: 121 CLQHVKDIAKD 131
V I K+
Sbjct: 853 IYSGVMTICKE 863
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +++++ +
Sbjct: 698 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 757
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 758 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 817
Query: 121 -CLQHVKDIA 129
C + +K +
Sbjct: 818 SCYEEMKAMG 827
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ F + + A + D + K DV+L N+++ A+C G+M+ I ++++ +L
Sbjct: 523 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 582
Query: 61 ISPDYNTFHILIKYFRK 77
P TF +I + K
Sbjct: 583 HRPTTRTFMPIIHGYAK 599
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI F + C A + + + DVV N+++ A+C+ G + + + +++ E
Sbjct: 415 MIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESN 474
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++I+I +++ ++ M +M ++G P ++L+ G+ + EA+
Sbjct: 475 CPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 534
Query: 121 -CLQHVK 126
C++ +K
Sbjct: 535 DCIEAMK 541
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R G +E A+ L ++ EA K + + +L + GD + V+R++
Sbjct: 345 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASG 404
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + ++++I F K A M +G +P+ ++LI
Sbjct: 405 VQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLI 451
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 39 AYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
AY R G ES ++++++ + P F ++ FR + A+ + +MH G QP
Sbjct: 348 AYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQP 407
Query: 99 EEELCSSLIFHLGKMRAHSEALCLQHVKDI 128
+ + +I GK CL H D+
Sbjct: 408 DRHFYNVMIDTFGKYN------CLGHAMDV 431
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+ISA G EA+ L +F A K N++L Y + G +++ HV+ ++ E
Sbjct: 274 LISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSEC 333
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T+ +L+ + + + A + +M G +P + S ++
Sbjct: 334 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 381
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EAK+ + K D ++ ++ + YC+ G + S V++++++
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ LI+ E Y M +M ++G P +++I L + +A
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654
Query: 121 CL 122
CL
Sbjct: 655 CL 656
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G F +A+ + D V +++L YCR G + +V+R++ ++
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ T +IL+ KE A + M+++G+ + C+++I L K
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCK 483
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G L + + + V N+++ + C G ++ K+ E+
Sbjct: 194 LVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVG 253
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
+SPD TF+ I K + A R DM
Sbjct: 254 LSPDIVTFNCRIAALCKSGQILEASRIFRDMQ 285
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G + A+ L + +K DVV N ++ + C+ G+ + ++ ++ E
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
++P + T++ L+ + +E A M +KG Q
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ G E+A L + +V N ++ CR GD+++ +M ++
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+S D T++ILI K+ A + + +M +KG P ++L+
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVIHVMRKLD 57
+++ C+ G A + D + +V+ N+++ YC R G M +++++
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220
Query: 58 ELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I P+ T++ILI F K++ A R +M ++G +P
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC+ EA L D E + + + +++ AYC+ G ME + + +
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 61 ISPDYNTFHILI 72
I P+ +T++ LI
Sbjct: 364 IFPEVSTYNCLI 375
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ A ++ + + + + +VV N ++ C G ++ + + ++
Sbjct: 234 LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD 293
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T ++LI F K K A DM K+G P ++LI
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I+ FCR + L ++ +K D DVV S++ YC+ G ME + +
Sbjct: 278 LINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISS 337
Query: 60 AISPDYNTFHILIKYFRK-------EKMY-----------MLAYRTMVDMHKKGHQPEEE 101
I P+ TF+ILI F K E MY ++ + +++D H + + E
Sbjct: 338 GIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERS 397
Query: 102 L 102
L
Sbjct: 398 L 398
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G +EA + + E K K D + ++ +C G + I + ++
Sbjct: 454 VIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTG 513
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTM 88
+PD T LI K M AYR M
Sbjct: 514 CAPDSITMTSLISCLLKAGMPNEAYRIM 541
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ +A C+ EA+ RD + ++ + N ++ +C+ G+++ ++ +++E
Sbjct: 419 LTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKR 478
Query: 61 ISPDYNTFHILI 72
PD T+ ILI
Sbjct: 479 CKPDKITYTILI 490
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+ G +E A+ + ++ EA + + + + +L +Y G + V+R++
Sbjct: 438 LIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSG 497
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SPD + ++++I F K A T M +G QP+ ++LI K H++A
Sbjct: 498 VSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 556
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A G EEA+ + + + N++L Y +TG ++ ++ +++
Sbjct: 368 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 427
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPD +T+ +LI + + A + +M G +P + S ++
Sbjct: 428 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRIL 474
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G A +L E + K +V N ++ CR G +H+++++ +
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SPD ++++LI +E AY+ + M+ +P+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR G +A L + D+V N ++ CR G M + ++ ++
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF +I F K+ +A + M +KG +E ++LI + K+ +AL
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++A L + + K +V ++ CR G +E V RK+ +
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P T++ LI + K+ + A+ + M K+ +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G EEA + R V+ N+++ YC+ G + ++ +++ A
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
P+ TF+ L++ + A + M G P+
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EAK+ + K D ++ ++ + YC+ G + S V++++++
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ LI+ E Y M +M ++G P +++I L + +A
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654
Query: 121 CL 122
CL
Sbjct: 655 CL 656
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G F +A+ + D V +++L YCR G + +V+R++ ++
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
P+ T +IL+ KE A + M+++G+ + C+++I L
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGL 481
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +CR G L + + + V N+++ + C G ++ K+ E+
Sbjct: 194 LVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVG 253
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH 92
+SPD TF+ I K + A R DM
Sbjct: 254 LSPDIVTFNCRIAALCKSGQILEASRIFRDMQ 285
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ EA + + + +VV +S+L +C G + +++ E
Sbjct: 123 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+IL+ KE M + A M +KG +P ++L+ EA
Sbjct: 183 VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242
Query: 121 CLQHVKDIAKDRCAMPFMRKFFIF 144
L ++ + + CA P +R + I
Sbjct: 243 KLFNI--MVRKGCA-PSVRSYNIL 263
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EAK L + K D V ++++ +C+ G + ++ ++
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG 322
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF---HLGKMRAHS 117
+ PD T+ I++ K+ A+ + M + +P + + LI + GK+ A
Sbjct: 323 LLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAR 382
Query: 118 EALCLQHVKDIAKD 131
E VK I D
Sbjct: 383 ELFSNLFVKGIQPD 396
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + + K D+ S + A + GDM + +++ L
Sbjct: 732 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 791
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LIK + + + A +M G +P++ + L+ L + +EA
Sbjct: 792 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 851
Query: 121 CLQHVKDIAKD 131
V I K+
Sbjct: 852 IYSGVMTICKE 862
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +++++ +
Sbjct: 697 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 756
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 757 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 816
Query: 121 -CLQHVK 126
C + +K
Sbjct: 817 SCYEEMK 823
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ F + + A + D + K DV+L N+++ A+C G+M+ I ++++ +L
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 61 ISPDYNTFHILIKYFRK 77
P TF +I + K
Sbjct: 585 HRPTTRTFMPIIHGYAK 601
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G E+ +L + K +V+ N+M+ +CR G E +++K+ E
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 61 ISPDYNTFHILIK 73
P+ T++ LI+
Sbjct: 569 PLPNSGTYNTLIR 581
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L + E + DVV+ N+++ C+ M+ +++ ++D
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I PD T+ LI + A R + DM ++ P S+LI
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+V N +L A + E VI + ++ L IS D T+ I I F + LA +
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 90 DMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
M K G++P+ SSL+ + S+A+ L
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A R G +EA D +A+ VV N++L + + G+ + V+R++++
Sbjct: 260 VIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAG 319
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + Y A + + M KG P ++++ G EAL
Sbjct: 320 CKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEAL 379
Query: 121 CL 122
L
Sbjct: 380 AL 381
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 17/82 (20%)
Query: 19 RDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKE 78
++ +A+ K D+V+LNSML Y + G + + +++L +SPD
Sbjct: 593 QEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPD-------------- 638
Query: 79 KMYMLAYRTMVDMHKKGHQPEE 100
++ Y +++DM+ K ++P E
Sbjct: 639 ---LITYNSLMDMYAKSNEPWE 657
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C+ G EEA L +AK K + V+ +++ YC+ G ++ ++ ++ A
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+++LI+ KEK A + M G +P + LI + K A AL
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++ N+M+ YC+ G++ K+ + + PD T+ LI + K AY
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQHVKDIAKDRCAMPFMRKFFIF 144
+ M +KG Q E ++LI L + +EAL L D+ +D C P +R + +
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL--FADMTEDNCC-PTVRTYTVL 305
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G F+ A ++ + + DV + L AY G +E V V+ K++E
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I PD T+ +LI + + + A+ + M G +P + S LI +L +M+
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704
Query: 118 EALCLQHVKDIAKDRCAMPFMRK 140
+ + V + + A+ K
Sbjct: 705 SEIGIDSVSNTLEYEIALKLFEK 727
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ + A + ++ D+V N++L A C+ G +++ + ++ +L
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I K A + +M +KG +P+ S+L+ LG+ EA+
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508
Query: 121 CLQH 124
+ H
Sbjct: 509 KIFH 512
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C +A +L + K K DVV N ++ C+ G ++ I + +
Sbjct: 249 LIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 308
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T +I+++ +M A R + DM +KG P + LI L + R A+
Sbjct: 309 CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368
Score = 42.4 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G ++A ++ E DV+ N ++ YC++G+++ + V L+ ++
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMS 203
Query: 61 ISPDYNTFHILIK 73
++PD T++ +++
Sbjct: 204 VAPDVVTYNTILR 216
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G ++A ++ E DVV N++L + C +G ++ + V+ + +
Sbjct: 182 LIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ ILI+ + A + + +M KKG +P+
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 277
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G +EA + + + K +V+ N +L + C TG ++ +
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
SP TF+ILI + ++++ A + M K G P
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+A+C+ EE+ L + DVV +S+L +CR G + + R++ E+
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG 386
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSL---IFHLGKMRAHS 117
+ P++ ++ +I K M A+ M +G + C+++ +F +GK +
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE 446
Query: 118 EAL 120
E
Sbjct: 447 EVF 449
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDM-------ESVIHVM 53
+I +C G +A +L + K D+V N++L A+C+TGD+ ++
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297
Query: 54 RKLDELA------------ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQ 97
+ D L + P T+ LI K+ E+ + L Y+ M+ G
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL-YKKMI---MNGIM 353
Query: 98 PEEELCSSLIFHLGKMRAHSEALCL 122
P+ CSS+++ + +EA L
Sbjct: 354 PDVVTCSSILYGFCRHGKLTEAAVL 378
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I FC+ +A ++ +D ++ DVV SM+ YC+ G M ++ + L
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P TF++L+ + K + A M G P+ +SLI
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA + + E K K D + ++ +C G M + + K+ +
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
SPD T L+ K M AY + + +KG
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQS 518
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 44/110 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS +C+ G EA L D V N ++ Y + G+M + + K+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD TF LI + + +R +M+ +G P S LI L
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + + K D+ S + A + GDM + +++ L
Sbjct: 732 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 791
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LIK + + + A +M G +P++ + L+ L + +EA
Sbjct: 792 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 851
Query: 121 CLQHVKDIAKD 131
V I K+
Sbjct: 852 IYSGVMTICKE 862
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +++++ +
Sbjct: 697 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 756
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 757 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 816
Query: 121 -CLQHVK 126
C + +K
Sbjct: 817 SCYEEMK 823
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ F + + A + D + K DV+L N+++ A+C G+M+ I ++++ +L
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 61 ISPDYNTFHILIKYFRK 77
P TF +I + K
Sbjct: 585 HRPTTRTFMPIIHGYAK 601
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EE+ +L ++ K +V +L + C++G ++ + ++ +++ +
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ +LI K A +M K P +CS++I L + A SEA
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 499
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA +L + V +++ YC GDM S+ ++ +++ A
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T+ +++K KE + + + M+ +G P++ +++I
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 662
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKY----DVVLLNSMLCAYCRTGDMESVIHVMRKL 56
++S FC+ G + +A+ F KY DV N +L C G ME + +
Sbjct: 276 LMSGFCKMGSVD----VAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDM 331
Query: 57 DELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ + PD T++IL FR + A++ + M G P+
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPD 374
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV+ N+++ +C+ G + + R++ + P+ ++ L+ F KE M A +
Sbjct: 164 DVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 223
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCLQH 124
VDM + G P E +SLI K+ S+A L +
Sbjct: 224 VDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI C+ G E A+ L + + + D V NSM+ + + G ++ + ++ ++
Sbjct: 101 MIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 160
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T++ LI F K +M + G +P S+L+
Sbjct: 161 CEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLV 207
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + + K D+ S + A + GDM + +++ L
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LIK + + + A +M G +P++ + L+ L + +EA
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Query: 121 CLQHVKDIAKD 131
V I K+
Sbjct: 855 IYSGVMTICKE 865
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + ++ A+ + + N ++ + R GD+ +++++ +
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Query: 121 -CLQHVK 126
C + +K
Sbjct: 820 SCYEEMK 826
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ F + + A + D + K DV+L N+++ A+C G+M+ I ++++ +L
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 61 ISPDYNTFHILIKYFRK 77
P TF +I + K
Sbjct: 585 HRPTTRTFMPIIHGYAK 601
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A CR G + A+Q+ E K +VV +S+L + G + MRK+ +
Sbjct: 405 LVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSG 464
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + SL+ L K EA
Sbjct: 465 IAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAE 524
Query: 121 CL 122
L
Sbjct: 525 AL 526
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ CR G F EAK ++ + D N+M+ A CR G+ + ++ ++ +I
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
P+ T+ L+ + + A + +M G P
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTP 677
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ + G EEA+ L +D + D V +++ +TG+M + + V ++L E
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+SPD +++ I + + A + +M G +P++ +++I
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 616
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ EEA L DVV L++++ CR G + R++D++
Sbjct: 265 LIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIG 324
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P++ T+ I K + + + +M +G + + ++++ LGK EA
Sbjct: 325 VAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEA 383
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G EEA + RD +K +VV N +L + C G E ++ ++D
Sbjct: 131 LLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEE 190
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
SP T++ILI A+ + +M + +P + +I HL K
Sbjct: 191 RSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCK 242
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G A QL E + V NS++ C G++ + ++ KL
Sbjct: 26 LVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 85
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ P+ T+ L++ KE+ A + + ++ KG QP
Sbjct: 86 LVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQP 123
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I FC+ +A ++ +D ++ DVV SM+ YC+ G M ++ + L
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P TF++L+ + K + A M G P+ +SLI
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G EA + + E K K D + ++ +C G M + + K+ +
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQ 97
SPD T L+ K M AY + + +KG
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQS 518
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 44/110 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS +C+ G EA L D V N ++ Y + G+M + + K+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
PD TF LI + + +R +M+ +G P S LI L
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +FC G EA + + E K + ++ N+++ AYC++ +E + ++
Sbjct: 325 LIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKG 384
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I P TF+IL+ + + + + +M G +P + LI G+ + S+
Sbjct: 385 IKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSD 442
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI A+ G E+A + + + K + ++L A+ R GD E+++ + + +
Sbjct: 466 MIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEK 525
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
+ TF+IL+ F K+ ++M A + + K G QP
Sbjct: 526 VKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQP 563
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ F + G F EA+ + +F + V+ N ++ AY R G ++ ++++++ L
Sbjct: 536 LVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALR 595
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
+ PD T+ +I F + + + A+ +M K G+
Sbjct: 596 LRPDSITYSTVIYAFVRVRDFKRAFFYHKEMVKSGY 631
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI KE A + M +KG P+ ++LI L + EA+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Query: 121 CL 122
L
Sbjct: 311 WL 312
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C ++A L R + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
I P+ + L++ + K + + V+M +KG +P+ + + LI L K+
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C ++A +L + + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD + LI K A+ M M ++G +P
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 16 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 75
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD + +I K+ + A +M +KG P
Sbjct: 76 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 114
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ + ++R++
Sbjct: 191 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 246
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A +M G P+ C+ L++ + EAL
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 306
Query: 121 CLQHVKDIAK 130
L V ++K
Sbjct: 307 ELFEVIQMSK 316
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC EEA +L + D V N ++ C+ ++ + L
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 351
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++++I F + A M GH+P+ ++LI
Sbjct: 352 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 398
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 51 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 110
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++ +I F + A R + DM ++ P+ ++LI
Sbjct: 111 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 157
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 343
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+SPD T++I+++ + + A V + + G Q E + ++ L K + +A
Sbjct: 344 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 403
Query: 120 -----LCLQHVK 126
LCL +K
Sbjct: 404 QMFQNLCLMDLK 415
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 343
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+SPD T++I+++ + + A V + + G Q E + ++ L K + +A
Sbjct: 344 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 403
Query: 120 -----LCLQHVK 126
LCL +K
Sbjct: 404 QMFQNLCLMDLK 415
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G F EA L + A + DVV+ NS++ C+ G+++ + + E
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI+ + A M +M KG P ++LI G +A
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN--GFTQADRTDH 391
Query: 121 CLQHVKDIAKDRCAMP 136
LQ V ++ K MP
Sbjct: 392 ALQLVNEM-KSNGLMP 406
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV+ + + C+ G + + + R+++E +PD T++ILI K+ + M
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 89 VDMHKKGHQPEEELCSSLI 107
+M +G P ++LI
Sbjct: 150 DEMQARGFSPTVVTYTTLI 168
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G EAK+L ++ E K VV S++ C++ D++S I ++ ++
Sbjct: 197 LIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKG 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
I P+ T+ L+ K A + M + H P S+L+ L GK++
Sbjct: 257 IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAV 316
Query: 118 EAL 120
E L
Sbjct: 317 EIL 319
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R G +E A+ L ++ EA K + + +L + GD + V+R++
Sbjct: 347 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASG 406
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++++I F K A M ++G +P+ ++LI K H A+
Sbjct: 407 VQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAM 466
Query: 121 CL 122
L
Sbjct: 467 EL 468
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + + G + A+Q+ + D + ++ AY R G ES ++++++
Sbjct: 312 LLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 371
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P F ++ FR + A+ + +MH G QP+ + +I GK
Sbjct: 372 VKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYN------ 425
Query: 121 CLQHVKD 127
CL H D
Sbjct: 426 CLGHAMD 432
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C+ E+A L R K DV N ++ CR GD+E + + ++D
Sbjct: 326 LIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKH 385
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLGKMRAH 116
+ D T++IL+ + R + +M KKG +P + +++I G +R H
Sbjct: 386 LKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQH 444
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC+ ++A +L D + +V N ++ AYC+ +ME + R +
Sbjct: 291 LLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 350
Query: 61 ISPDYNTFHILI 72
+ PD +T++ LI
Sbjct: 351 VYPDVSTYNCLI 362
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCRG +A L + + +VV N ++ C+ GD+ S ++ ++E
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ + I K + A + +KG + E + S+LI
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C+ G EEA+ L + K K + V+ ++++ YC+ G + ++ K+
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKGHQPEEELCSSLIFHLGK 112
P+ T++ LI + KEK + A R +VD M K+ +P + + LI +L K
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRDIEPAADTYTILIDNLLK 601
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G A ++ E+ + N ++ +CR ++ + ++ K+ E
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ILI KE AY+ + M++ G P+E S I L K EA
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504
Query: 121 CL 122
L
Sbjct: 505 SL 506
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A+C G ++A+ L AK D +L + AY R G ++ +++++ E+
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690
Query: 62 SPDYNTFHILIKYFRKEK 79
P Y T+ LIK+ K
Sbjct: 691 EPSYYTYSCLIKHLSNAK 708
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C F++AK++ K VV N+++ YC+ G S + ++ ++
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SP+ T++ LI F + K A + M ++ QP
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPN 448
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M S C F + + + + E K D+ + NS+L Y G+ + V + + E
Sbjct: 891 MTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAG 950
Query: 61 ISPDYNTFHILI----KYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + R E+ + L + +M K+G P+ + SL+ K
Sbjct: 951 LEPDEDTYNTLIVMYCRSLRPEEGFTL----LNEMGKRGLTPKLQSYKSLLAASAKAELR 1006
Query: 117 SEA 119
+A
Sbjct: 1007 EQA 1009
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+S R G EEA++L + K D V NS+L A+ + G+++ V H +L +
Sbjct: 334 MVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAG 393
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ T++ +I + K LA +M G P+ + +I LGKM +EA
Sbjct: 394 FKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEA 452
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
+I+A + GC L FE + + DV+ N+++ A ++ ++E + V ++
Sbjct: 262 LINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIA 321
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T++ ++ + A R ++ +KG P+ +SL++ K
Sbjct: 322 SECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAK 375
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA + E+A + + A + D+ N+M+ + R G E + +L E
Sbjct: 299 LISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKM 113
PD T++ L+ F KE T ++ K G + E +++I GKM
Sbjct: 359 FMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKM 411
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +EA ++A++ +AK+ VV NS++ + + ++ I V ++
Sbjct: 163 VIEELSKTGRVDEAVEIAKEADAKHCT-SVVTYNSLVLGFLKARRLKRGIKVFTRMARTG 221
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPD T++IL + + ++ AY+ + M++ G P+ +SLI
Sbjct: 222 PSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLI 268
>gi|71021303|ref|XP_760882.1| hypothetical protein UM04735.1 [Ustilago maydis 521]
gi|46100978|gb|EAK86211.1| hypothetical protein UM04735.1 [Ustilago maydis 521]
Length = 808
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF-HIL 71
+A+ L K ++ +N++L AY R GD+E ++ +R D+L + PD TF IL
Sbjct: 544 QAQSLLDQMLTKGPAPNIGTINTLLRAYARAGDLEPIVSTLRLADKLELKPDVVTFTTIL 603
Query: 72 IKYFRK--EKMYMLAYRTMVDMHKKGHQP 98
RK E RT+ M G QP
Sbjct: 604 DALLRKGGESATAAVIRTLDIMKSMGVQP 632
>gi|440793601|gb|ELR14780.1| PPR repeat/pentatricopeptide repeat domain containing protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 610
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
NSM+ A+ R G ++ V ++ + I PD T+ +I K AY+T ++M
Sbjct: 157 NSMIMAFARAGRIDKVRDMLEVMKHKGIEPDVRTYTEIINNSCKAGRVAEAYQTFIEMQD 216
Query: 94 KGHQPEEELCSSLIF---HLG------KMRAHSEALCLQ 123
G QP+ ++ S+LI H+G +++ EAL L+
Sbjct: 217 VGVQPDLKVYSALIAGFSHVGDHLKAQQLKEEMEALGLE 255
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI AF R G ++ + + + K + DV ++ C+ G + ++ ++
Sbjct: 159 MIMAFARAGRIDKVRDMLEVMKHKGIEPDVRTYTEIINNSCKAGRVAEAYQTFIEMQDVG 218
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI F ++ A + +M G + S ++ L + R +E
Sbjct: 219 VQPDLKVYSALIAGFSHVGDHLKAQQLKEEMEALGLEASMITYSGMLSGLARNRQLTE-- 276
Query: 121 CLQHVKDIAKDRCAMPFMR 139
++ V + K R +P R
Sbjct: 277 -MERVIEAMKKRNMVPNAR 294
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++AF R G E+A+++ + + + DV N+++ AY R G + + ++ +
Sbjct: 311 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG 370
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD +++IL+ + + ++ A ++ ++G +P
Sbjct: 371 CEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRP 408
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G +A ++ R E DV N+++ YCR G +++ R + +
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA---ARRLIGSMP 138
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD T+ LI+ A + DM ++G QP
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQP 176
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A CR FE+A + + AK ++V N ++ CR G ++ ++ +L
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD ++ L+K K + +M +K P E LI
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G ++A++L + + D V ++L C + + V + ++ E
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
P+ TF +LI++F + M A + + M + G LC+ +I
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVI 325
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S FC+ G EEA +L +++ N++L + E + ++ L
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+SPD TF +I KE A + + G +P+ + + ++ L K
Sbjct: 556 VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCK 607
>gi|255583549|ref|XP_002532531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527743|gb|EEF29847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 212
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%)
Query: 13 EAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILI 72
EA++LA + + K D + +++ YC+ GD+ES + + + + + D F +I
Sbjct: 3 EARKLADEMNERCQKPDKITYTTLIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTAII 62
Query: 73 KYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
KE + A R + +M K G +P++
Sbjct: 63 SGLCKEGKVIDAERALREMLKAGFKPDD 90
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +C+ G E A ++ + + D+V +++ C+ G + +R++ +
Sbjct: 26 LIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTAIISGLCKEGKVIDAERALREMLKAG 85
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
PD T+ +++ F K+ ++ + +M GH P
Sbjct: 86 FKPDDATYTMVMDGFCKKGDMKTGFKLLKEMQSDGHVP 123
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD + +I K+ + A +M +KG P
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ + ++R++
Sbjct: 407 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A +M G P+ C+ L++ + EAL
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 121 CLQHVKDIAK 130
L V ++K
Sbjct: 523 ELFEVIQMSK 532
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC EEA +L + D V N ++ C+ ++ + L
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++++I F + A M GH+P+ ++LI
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++ +I F + A R + DM ++ P+ ++LI
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G +A+Q+ + N+++ YC+ D++ + ++
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I PD+ T++ LI K +M A +++M K G P E ++LI G+
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGR 452
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 39/72 (54%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ +EA++L + + + DVV N+++ A C GD + + +++++ +
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610
Query: 61 ISPDYNTFHILI 72
I P T+H L+
Sbjct: 611 IRPTLRTYHPLL 622
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ EA+ L + E V N+++ AY R G +E V+ + +
Sbjct: 411 LINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKG 470
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I + +F ++K F K A + DM K P ++ +S+I
Sbjct: 471 IKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AFC+ G EA + D K + + NS++ AY +G E ++ K+
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+S T+++L+K K A + ++ +G +P+
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPD 579
>gi|20279450|gb|AAM18730.1|AC092548_8 hypothetical protein [Oryza sativa Japonica Group]
Length = 729
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+V N+++ C G M+ V H++R+LD + P+ +TF LI + K + A + +
Sbjct: 572 DIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLL 631
Query: 89 VDMHKKGHQP 98
M K G P
Sbjct: 632 NVMKKSGFHP 641
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++ + L R+ + + + ++++ +C+ + E + ++ + +
Sbjct: 579 LILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSG 638
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
P+Y T+ ++I F K K A M DM + P++ L + L K +
Sbjct: 639 FHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAK 692
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
++ AFC G +A ++ V N+++ AYCR G D + + K+++
Sbjct: 438 VLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQE 497
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I KE A + + +M KG P ++LI
Sbjct: 498 GLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLI 545
>gi|222612695|gb|EEE50827.1| hypothetical protein OsJ_31237 [Oryza sativa Japonica Group]
Length = 550
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+V N+++ C G M+ V H++R+LD + P+ +TF LI + K + A + +
Sbjct: 393 DIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLL 452
Query: 89 VDMHKKGHQP 98
M K G P
Sbjct: 453 NVMKKSGFHP 462
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++ + L R+ + + + ++++ +C+ + E + ++ + +
Sbjct: 400 LILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSG 459
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMR 114
P+Y T+ ++I F K K A M DM + P++ L + L K +
Sbjct: 460 FHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAK 513
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
++ AFC G +A ++ V N+++ AYCR G D + + K+++
Sbjct: 259 VLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQE 318
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +I KE A + + +M KG P ++LI
Sbjct: 319 GLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLI 366
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG ++A+++ +D K DV N M+ YC+ G +E + + K+++
Sbjct: 354 LLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNG 413
Query: 61 ISPDYNTFHILIK 73
P TF I+I
Sbjct: 414 CIPSAVTFEIIIN 426
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G A +L R + + K +V + N+++ A C+ + + ++
Sbjct: 181 LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 240
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
IS + +++I+IK F K KM A +MH+K P
Sbjct: 241 ISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVP 278
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G +A A+ K+D V +++ C+ GD I ++RK+D
Sbjct: 146 LIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRL 205
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
P+ ++ +I K ++ AY +M KG
Sbjct: 206 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 240
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ EA L + AK +VV N M+ +C++ ++ +++ +++ +
Sbjct: 216 IIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKN 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ L+ K + + +MH +G + +SLI L K A+
Sbjct: 276 MVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAI 335
Query: 121 CL-QHVKDIAKDRCAMPFM 138
L +KD DR +
Sbjct: 336 ALFNKMKDXRFDRLTFTIL 354
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++V S++ +C T +M ++ + ++ + P+ T+ LI K + A
Sbjct: 362 NIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELF 421
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
+ MHK G P + C+ ++ L K HSEA+ L
Sbjct: 422 LVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSL 455
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +CR C EA L K DV+L NS++ +C G+++ H++ + E
Sbjct: 539 LLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHG 598
Query: 61 ISPDYNTFHILIKYFRKE 78
I P+ T H L+ + K+
Sbjct: 599 IMPNNITHHALVLGYEKK 616
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ G E A+ L + + DVV N+++ Y + G ++ ++ +
Sbjct: 399 LIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAG 458
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ILI K + A + ++ ++G P+ +++I EA
Sbjct: 459 VSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAF 518
Query: 121 CL 122
L
Sbjct: 519 LL 520
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C GG +A L + + + D V N+++ AYC+ GDM S + V K+
Sbjct: 350 ILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAG 409
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ D T+ LI F K K A + M G P
Sbjct: 410 LKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPS 448
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G E+A+++ + E K D+ N+++ YC+ G + V +++
Sbjct: 212 LLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG 271
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++ LI F +E A + D+ K P +SLI ++ EAL
Sbjct: 272 ISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEAL 329
Query: 121 CLQHV 125
L+ V
Sbjct: 330 RLKEV 334
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHK 93
N +L A C++GD+E V+ +++ + PD T++ LI + K+ M+ A M
Sbjct: 210 NVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEM 269
Query: 94 KGHQPEEELCSSLIFHL---GKMRAHSEALCL-QHVKDIAKD 131
G P+ +SLI+ G+MR EA+ L + +KD+ +
Sbjct: 270 AGISPDIFTYNSLIYGFCREGRMR---EAVQLFRDIKDVTPN 308
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
+ G ++A +L R+ + Y D+V+ N ++ A C++G +E + KL + P
Sbjct: 154 GLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLP 213
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
D ++ +I +E + AY+ M + G P+
Sbjct: 214 DVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPD 249
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ G E+A++L K DV S++ CR G ++ R+++
Sbjct: 186 LIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDG 245
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE---EELCSSLIF---HLGKMR 114
PD +++++++ F + A + +M +G + L + L+ +LG R
Sbjct: 246 CPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKDDNLGLKR 305
Query: 115 AHSEALCLQHVK 126
E+ C Q K
Sbjct: 306 LLGESECCQGEK 317
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 8 GGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNT 67
GG +++ QL +D A+ D+V + L + G ++ + + R++ ++PD
Sbjct: 123 GGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182
Query: 68 FHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
++ILI K A + +H KG P+ +S+I L
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGL 225
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C G ++AK++ D E + + + V ++ AY R G+++ V ++ + +
Sbjct: 235 LMRGLCDAGRHDDAKKMMFDMEYQGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRK 294
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMH-KKGHQPE--------EELCSSLIFHLG 111
+ PD ++++LIK + A++ +V+M K+G P + CS+ F LG
Sbjct: 295 LKPDDASYNVLIKCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLG 354
>gi|255551261|ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544172|gb|EEF45696.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 1 MISAFCRGGCFEEA-----KQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRK 55
++ A C+ G F+ A + L + +Y ++ N ++ YC G E I V RK
Sbjct: 328 VLDALCKNGKFDVALKLFDRMLQQHNPPRYLAVNLGSFNVIVDGYCAQGRFEDAIDVFRK 387
Query: 56 LDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ + SPD +++ LI K M + A +M KG +P+E
Sbjct: 388 MGDYRCSPDVLSYNNLIDQLCKNGMLVEAEDLYGEMDGKGVKPDE 432
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C G FE+A + R DV+ N+++ C+ G + + ++D
Sbjct: 368 IVDGYCAQGRFEDAIDVFRKMGDYRCSPDVLSYNNLIDQLCKNGMLVEAEDLYGEMDGKG 427
Query: 61 ISPDYNTFHILIKY-FRKEKMYMLA--YRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD T+ +L+ K+++ A +R MVD G +P + + L+ L K++
Sbjct: 428 VKPDEYTYGLLMDTCLEKDRVDDGAGYFRKMVDT---GLRPNLAVYNRLVDKLVKLKKID 484
Query: 118 EALCLQH--VKDIAKDRCAMPFM 138
EA + VK + D + FM
Sbjct: 485 EAKSFYYLMVKKLKMDNASYKFM 507
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ ++A L ++ E K + +VV +S++ C G ++ + E
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ TF+ LI F KE ++ A + DM K+ P+ +SL+
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 334
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L EA + DVV+ N+++ + C+ ++ +++ ++++
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ LI + A + + DM +K P ++LI
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 299
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF + G F EA++L D + D+ NS++ +C M + +++ E
Sbjct: 298 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC----MHDRLDKAKQMFEFM 353
Query: 61 IS----PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI---FHLG 111
+S PD T++ LIK F K K +M +G + ++LI FH G
Sbjct: 354 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R G +E A+ L ++ EA K + + +L + GD + V+R++
Sbjct: 340 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + ++++I F K A M ++G +P+ ++LI
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI F + C A + + DVV N+++ A+C+ G + + ++ E
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++I+I +++ + + +M ++G P ++L+ G+ + EA+
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529
Query: 121 -CLQHVK 126
C++ +K
Sbjct: 530 DCIEAMK 536
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+ISA G EA+ L +F A K N++L Y R G +++ V+ ++ +
Sbjct: 269 LISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQC 328
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T+ +L+ + + + A + +M G +P + S ++
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 376
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
++V S++ +C +M ++ + ++ + P+ T++ LI F K + A
Sbjct: 357 NIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELF 416
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
MHK G P+ + C+ ++ L K HSEA+ L
Sbjct: 417 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 450
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C G +A +L +K K DVV N M+ C+ G ++ ++ K++E
Sbjct: 469 ILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG 528
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
PD T+++ ++ + + + ++ M KG + LI
Sbjct: 529 CPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 575
>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ FC GG EA++L + K DVV N+++ +C+ G++E + R++
Sbjct: 288 LIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSG 347
Query: 61 ISPDYNTFHILIKYF 75
I TF LI+ +
Sbjct: 348 IESSCVTFEHLIEGY 362
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G E+A+ L R+ + V ++ YCR GD+ S I V + +
Sbjct: 323 IIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIEGYCRIGDVNSAILVYKDMRRRD 382
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTM------VDMHKKGHQPEEELCSSLIFHLGKMR 114
+ T +LI ++K A + M V H G EL + + GKM
Sbjct: 383 FRLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDVSFHPNGKS--YELLINGLCEDGKME 440
Query: 115 AHSEALCLQ 123
EAL LQ
Sbjct: 441 ---EALKLQ 446
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD + +I K+ + A +M +KG P
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 325
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ + ++R++
Sbjct: 402 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 457
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A +M G P+ C+ L++ + EAL
Sbjct: 458 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 517
Query: 121 CLQHVKDIAK 130
L V ++K
Sbjct: 518 ELFEVIQMSK 527
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC EEA +L + D V N ++ C+ ++ + L
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++++I F + A M GH+P+ ++LI
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 609
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++ +I F + A R + DM ++ P+ ++LI
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 368
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 4 AFCRGGCFEEAKQLARDFEAK--YDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
AF +G F + R +A+ +D+ DVV +++LCAY R G +E V+ ++ +++
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I + +++ ++ F + + A +H G P++ SS++ +G SE
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD----SE 266
Query: 119 ALCLQHV-------KDIAKDRCAMPFM 138
L + + + + KD+C + M
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAM 293
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R GC EE ++ + E+ + ++V N +L + R+G + + + +K+ L
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T ++ +M + + K+G ++ + S++I GK
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A+C EEA + A + DVV N+M AY + G+ E ++ K+
Sbjct: 207 LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNK 266
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ T I+I + KE A R + M + G P + +SLI
Sbjct: 267 VKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLI 313
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ + R G +A+ L + +VV+ +++ +C G M+ + K+ E+
Sbjct: 382 LAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMG 441
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
SP+ T+ LI + + K A + M ++G PE
Sbjct: 442 TSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPE 480
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A R F+ L K D +LLN+M+ A+ +G ++ + + +K+ E
Sbjct: 101 LVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYG 160
Query: 61 ISPDYNTFHILIKYF 75
P +T++ LIK F
Sbjct: 161 CKPTTSTYNTLIKGF 175
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G EA + + + V+ NS++ Y D V + ++E
Sbjct: 277 IISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFG 336
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD TF ++ + + DM K G +P+
Sbjct: 337 IKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPD 375
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + G ++ L +D + D+ N +L AY + G ++ + V+ ++
Sbjct: 204 LLRAFAQAGDTKQVDILFKDLDESVVSPDIYTYNGVLDAYGKNGMIKEMESVLLRMKSKQ 263
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+ILI + +++++ + + + +P +S+I + GK R +A
Sbjct: 264 CRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREKA 322
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 9 GCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTF 68
G FE+ K +AR + +V N +L A+ + GD + V + + LDE +SPD T+
Sbjct: 183 GYFEKMKCIARC------QPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSPDIYTY 236
Query: 69 HILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
+ ++ + K M ++ M K +P+ + LI G+
Sbjct: 237 NGVLDAYGKNGMIKEMESVLLRMKSKQCRPDVITFNILIDSYGR 280
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ CR C +EA L + A K+++ ++N+M+ A + E + +
Sbjct: 654 ILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATG 713
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ P+ +T+ ++I KE A M K G P L +++I
Sbjct: 714 LVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNII 760
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+S+ C+ G +EA + AK K D+V + +L Y G + ++++ ++ I
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGI 398
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D++ ++ILI + K M A M ++G P+ ++I +M ++A+
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAM 457
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ + R G E A+ + + +VV+ +++ +C G ME+ V K+ E+
Sbjct: 380 LAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIG 439
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
ISP+ TF LI + + + A + M +KG PE+
Sbjct: 440 ISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEK 479
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K DV+ ++++ A+ G M+ + + + I PD + F IL K + + A
Sbjct: 336 KPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAES 395
Query: 87 TMVDMHKKGHQPEEELCSSLI 107
+ M K G +P +C+++I
Sbjct: 396 VLTSMAKSGVRPNVVICTTII 416
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A + FE L E K D +L N+M+ A+ +G+++ + + +K+ +
Sbjct: 99 LVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTG 158
Query: 61 ISPDYNTFHILIK 73
P +TF+ LIK
Sbjct: 159 CKPTTSTFNTLIK 171
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVIHVMRKLDELA 60
A+ R G EEA++L E K D ++ NS++ AY +G DME+++ M K
Sbjct: 545 AYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQ 604
Query: 61 ISPDYNTFHILIKYF 75
PD T++ LI+ +
Sbjct: 605 TKPDIGTYNTLIQVY 619
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ + RGG F A ++ D + K D+V+ N ++ A+C+ G M+ + V+ ++
Sbjct: 331 IMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANR 390
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P T+ ++ + K A + G +P +SL+ L K R A
Sbjct: 391 LLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 449
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R G +E A+ L ++ EA K + + +L + GD + V+R++
Sbjct: 340 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + ++++I F K A M ++G +P+ ++LI
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI F + C A + + DVV N+++ A+C+ G + + ++ E
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++I+I +++ + + +M ++G P ++L+ G+ + EA+
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529
Query: 121 -CLQHVK 126
C++ +K
Sbjct: 530 DCIEAMK 536
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R G +E A+ L ++ EA K + + +L + GD + V+R++
Sbjct: 340 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + ++++I F K A M ++G +P+ ++LI
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLI 446
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI F + C A + + DVV N+++ A+C+ G + + ++ E
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++I+I +++ + + +M ++G P ++L+ G+ + EA+
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529
Query: 121 -CLQHVK 126
C++ +K
Sbjct: 530 DCIEAMK 536
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C GG + A +L K + ++ N+++ +CR G ++ + + +
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T++IL+ Y +E M A R + M + G +P+
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G + A + RD DV+ N++L +C+T + +H+ ++
Sbjct: 405 VVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKG 464
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ +++ + K LA R M ++G L +L+
Sbjct: 465 LYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLV 511
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF R G K+L + D + +++ C+ G ++ V R + E
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
++PD +++ L+ F K M A +M KG P+E
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDE 469
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCR G ++A ++ D+V N +L C G ++ + ++ ++
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVD-MHKKG 95
+ PD +++ L+K F K M A+ MV+ M KG
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG 325
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
++ CR E A +L +K DVV ++ A C + V R+L + +
Sbjct: 126 LNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL 185
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
SPDY L+ LAY +V + K G + + ++LI
Sbjct: 186 SPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALI 231
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ + A + + DVV N+++ A+C+ + ++
Sbjct: 300 LLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKG 359
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
I PD TF+ILI F +E + + + +M K P+ ++++ HL K
Sbjct: 360 IRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCK 411
>gi|242082131|ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
gi|241942184|gb|EES15329.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
Length = 426
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R G EEAK A + DV NS+ A C GD++ + ++
Sbjct: 257 LVDGLVRAGHLEEAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVALLADASSRG 316
Query: 61 ISPD---YNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEEL 102
+ PD + + +IK K + A+ DM KGH P +
Sbjct: 317 LCPDISHTSLYAAIIKALCKAGRFADAFAFFGDMKMKGHPPNRPV 361
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +CR G A +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+ + K A+ M + G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 CL 122
L
Sbjct: 295 AL 296
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +EA+Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 CL 122
L
Sbjct: 505 AL 506
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G + A LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ F + + A R ++DM K+ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LCL 122
L
Sbjct: 259 FDL 261
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ C G F+EAK + + K D N+M+ ++CR G+ + ++ ++ +I
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 62 SPDYNTFHILI 72
P+ T++ L+
Sbjct: 621 KPNLITYNTLV 631
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D+ ++ A C G + + R+L EL + PD T+++LI + A
Sbjct: 950 DIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLF 1009
Query: 89 VDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
DM K G P +SLI +LGK +EA
Sbjct: 1010 NDMEKSGIAPNLYTYNSLILYLGKEGKAAEA 1040
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C G ++ R + D++ N ++ R+G +E + + +++
Sbjct: 957 LIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG 1016
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++ LI Y KE A + ++ K G +P ++LI
Sbjct: 1017 IAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALI 1063
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +CR G A +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+ + K A+ M + G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 CL 122
L
Sbjct: 295 AL 296
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +EA+Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 CL 122
L
Sbjct: 505 AL 506
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G + A LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ F + + A R ++DM K+ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LCL 122
L
Sbjct: 259 FDL 261
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 36/71 (50%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ C G F+EAK + K D N+M+ ++CR G+ + ++ ++ +I
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 62 SPDYNTFHILI 72
P+ T++ L+
Sbjct: 621 KPNLITYNTLV 631
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I +CR EEA L DVV L++++ CR G + R++D++
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305
Query: 62 SPDYNTFHILIKYFRK 77
+P++ T+ LI K
Sbjct: 306 APNHVTYCTLIDSLAK 321
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 52/121 (42%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I A+C + A+ L E++ K V N ++ C+ ++ + V + + +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
+ D T+ L+ F + + +A R DM + G P E CS +I L K EA
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 122 L 122
L
Sbjct: 325 L 325
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G + A+ L + + ++ CR GD+ S + + R++ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 473
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
I+ + TF LI F K+K A R M P E
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C+ ++A L ++ E K + +VV +S++ C G ++ + E
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ TF+ LI F KE ++ A + DM K+ P+ +SL+
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L EA + DVV+ N+++ + C+ ++ +++ ++++
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P+ T+ LI + A + + DM +K P ++LI
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MIS++ R G ++A L + EA K DV+ N+++ + GD++ + +++ E
Sbjct: 469 MISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKG 528
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
PD T+ LI+ F K +A +M +G P
Sbjct: 529 YDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPN 567
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ +EA Q+ +K DVV N+++ YC+ G ++ + + ++
Sbjct: 546 MINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRG 605
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I D T+ LI FRK A +M G P+ S++
Sbjct: 606 IVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL- 59
+I FC G A L++ + D+V N++L C G ++ + + + + +
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 60 ----------AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+ PD T++ILI E ++ A +M +G P SS+I
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549
Query: 110 LGKMRAHSEA 119
L K EA
Sbjct: 550 LCKQSRLDEA 559
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G EA L + + + +++ C+ GD S ++++RK++E++
Sbjct: 184 LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMS 243
Query: 61 -ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I P+ + +I K+ + A+ +M +KG P+
Sbjct: 244 HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + G +A L + + K D+ N M+ +C +G +++++ E
Sbjct: 255 IIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T+ LI + KE+ + A +M +G P +S+I
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMI 361
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ GC +A L AK D+ N+++ YC+ M++ I ++ +
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG 463
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ ++ K T + +KG P + LI L K R +EAL
Sbjct: 464 VTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEAL 523
Query: 121 CL 122
L
Sbjct: 524 DL 525
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G ++A ++ +D + K D S++ C+ GD++ + + +
Sbjct: 299 IIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKG 358
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ LIK ++ + + A + M DM K+G P+ + +I L KM S+A
Sbjct: 359 LKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDK-YDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+IS FC G +EA QL R E +Y + V N M+ A+ DM+ + ++ +
Sbjct: 544 VISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDK 603
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ ++I F K Y ++ + G P +I
Sbjct: 604 GCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVI----------NC 653
Query: 120 LCLQH 124
LC+QH
Sbjct: 654 LCVQH 658
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G + A + R+ A+ + + N ++ + R GD+ +M+++ +
Sbjct: 664 LLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEG 723
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD +T+ I K + A +T+ +M G +P + ++LI
Sbjct: 724 VQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLI 770
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + R G EA L + + + + D+ S + A C+ GDM +++++ L
Sbjct: 699 LIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALG 758
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
+ P+ T+ LI + + A R +M G +P++ + L+ L
Sbjct: 759 VKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSL 808
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYR 86
K DVVL N+++ A+C G+M+ IH+++++ + P TF +I F + A
Sbjct: 515 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALE 574
Query: 87 TMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M + G P ++L+ L + R +A+
Sbjct: 575 IFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAV 608
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ G E++ QL + + + +V N ++ +Y ++G + + +M+K++
Sbjct: 257 IITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFR 316
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE-------ELCSSLIFHLGKM 113
I PD T+ +I F + A +M G +P C+SL M
Sbjct: 317 IVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGM 376
Query: 114 RAHSEALCLQHVKDI 128
HS A+ + V+D+
Sbjct: 377 ELHSVAVKIGCVEDL 391
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 46/105 (43%)
Query: 18 ARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRK 77
AR F D D V NS++ YC+ G++E + K+ E I P T++ILI + +
Sbjct: 239 ARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQ 298
Query: 78 EKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALCL 122
A M M P+ +S+I + S+AL L
Sbjct: 299 SGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALEL 343
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AF + +EEA + V NS + A+ R G + ++ +++E
Sbjct: 458 VIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESG 517
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEE 100
+ D ++F+ +IK FR+ Y A ++ V+M K +P E
Sbjct: 518 LKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNE 557
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ G +EA + R +A + + +L Y + G + V + ++
Sbjct: 318 LLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSN 377
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ILI+ F + + DM ++ +P E LIF GK + +A
Sbjct: 378 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDA 436
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGC-FEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+I+A RGG +E L + + + DV+ N++L A G + V R ++E
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNES 271
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD NT+ L++ F K + +M G+ P+
Sbjct: 272 GIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPD 311
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 44/84 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+ + + +L Y R GD + + V R + E+ + P +T+ ILI + K ++
Sbjct: 98 LAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWE 157
Query: 90 DMHKKGHQPEEELCSSLIFHLGKM 113
DM ++G +P + +S+I LGK+
Sbjct: 158 DMREQGLRPNVVVYTSVIATLGKL 181
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A + G ++A +L + + +VV S++ +C+ D+ S + + K+++
Sbjct: 310 VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEG 369
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ TF +LI++FRK A M G P ++I K + H EAL
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEAL 429
Query: 121 CL 122
L
Sbjct: 430 KL 431
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++S C+ G +EA +L E++ +VV N+++ +CR +M+ V + E
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 61 ISPDYNTFHILI 72
+ P+ T+ ILI
Sbjct: 509 LKPNNYTYSILI 520
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ ++A ++ + + K K D+ +++ +C+ +MES + +L E
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK 94
++P ++ LI FR + A +D++KK
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAA----LDLYKK 714
>gi|125570756|gb|EAZ12271.1| hypothetical protein OsJ_02159 [Oryza sativa Japonica Group]
Length = 596
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A CRG E A+ + E + + D V N++L YCR G ++ +H+ +
Sbjct: 216 LVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDALHLFDVMPYRR 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + +++ K A R M + G P+ S LI
Sbjct: 276 VQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLI 322
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+ + N ++ +C+ +E + V ++ + D+NT+ LI F + + M
Sbjct: 420 LAIYNMIIECFCQCDIVEEALDVKVEMISREVRLDFNTYRALITCFCRLGRSLDGESIMA 479
Query: 90 DMHKKGHQPEEELCSSLI 107
+M + G QP E +CS+L+
Sbjct: 480 EMIESGFQPNEAICSALV 497
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G EAK+L ++ + K VV + ++ C+ G+++ + + K+ + A
Sbjct: 197 LINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKA 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ K + A + M +K H+P S+LI L K +EA+
Sbjct: 257 IEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAV 316
>gi|125526348|gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indica Group]
Length = 596
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A CRG E A+ + E + + D V N++L YCR G ++ +H+ +
Sbjct: 216 LVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDALHLFDVMPYRR 275
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD + +++ K A R M + G P+ S LI
Sbjct: 276 VQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLI 322
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+ + N ++ +C+ +E + V ++ + D+NT+ LI F + + M
Sbjct: 420 LAIYNMIIECFCQCDIVEEALDVKVEMISREVRLDFNTYRALITCFCRLGRSLDGELIMA 479
Query: 90 DMHKKGHQPEEELCSSLI 107
+M + G QP E +CS+L+
Sbjct: 480 EMIESGFQPNEAICSALV 497
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 4 AFCRGGCFEEAKQLARDFEAK--YDKY---DVVLLNSMLCAYCRTGDMESVIHVMRKLDE 58
AF +G F + R +A+ +D+ DVV +++LCAY R G +E V+ ++ +++
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 59 LAISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
I + +++ ++ F + + A +H G P++ SS++ +G SE
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD----SE 266
Query: 119 ALCLQHV-------KDIAKDRCAMPFM 138
L + + + + KD+C + M
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAM 293
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ R GC EE ++ + E+ + ++V N +L + R+G + + + +K+ L
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
PD T ++ +M + + K+G ++ + S++I GK
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ E+A QL + K D NS+L +CR GD++ +++ +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K +A + + + KG + +I L + R +EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 121 CL 122
L
Sbjct: 631 NL 632
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G +EA ++ + + V N+++ C+ +E + R L
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ + + +A +M KG +P+E + LI L EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++ C+ G + A ++ + YD DV NS++ C+ G+++ + V+ ++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T++ LI KE A + KG P+ +SLI L R H A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 120 LCL 122
+ L
Sbjct: 420 MEL 422
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/108 (16%), Positives = 52/108 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FCRGG ++A + + + + D+V +++ C+ G +E ++R +
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIF 108
I+ + ++ +I+ +++ A +M ++ P + + ++F
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 49/109 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G +EA + + E V+ N+++ +C+ + +++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+S + T++ LI K + A + M M +G +P++ +SL+ H
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ AF + G ++ L +D + DV N +L AY + G ++ + V+ ++
Sbjct: 205 LLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQ 264
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+ILI + +++ + + + + +P +S+I + G+ R +A
Sbjct: 265 CRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKA 323
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I ++ R F++ +Q+ + ++ NSM+ Y R E V+ K++EL
Sbjct: 275 LIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELG 334
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI-FHLGKMRAHSEA 119
P+Y T LI M A+ D K Q +EL +S HL + + EA
Sbjct: 335 FKPNYVTQECLI--------IMYAH---CDCVSKARQVFDELVTSQTKVHLSSLNSMLEA 383
Query: 120 LCLQ-------HVKDIAKDRCAMP 136
C+ + D A +C +P
Sbjct: 384 YCMNGLHTEADRLLDTALQQCVVP 407
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMV 89
+V N +L A+ + GD + V + + LDE +SPD T++ ++ + K M +V
Sbjct: 199 IVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLV 258
Query: 90 DMHKKGHQPE 99
M +P+
Sbjct: 259 RMKSTQCRPD 268
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I C+ ++A QL + + K V +++ + G ++ + ++ ++ E
Sbjct: 83 IDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN 142
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEALC 121
SP T+ ++I K A R VDM G +P+ + ++LI L K+ EAL
Sbjct: 143 SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALV 202
Query: 122 LQHVKDIAKDRCA 134
++ + ++ CA
Sbjct: 203 --YLNQMVENGCA 213
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI + + G EA L + K D+V + Y R GD ++++ + R +++
Sbjct: 105 MIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAE 164
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ F+ LI + LA +M G +P E S LI K+ A +AL
Sbjct: 165 IKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMASYGLEPSEITLSILIDMYTKVGALDKAL 224
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ E+A QL + K D NS+L +CR GD++ +++ +
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K +A + + + KG + +I L + R +EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630
Query: 121 CL 122
L
Sbjct: 631 NL 632
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS C+ G +EA + + + V N+++ C+ +E + R L
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ + + +A +M KG +P+E + LI L EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 50/109 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + C G +EA + + E V+ N+++ +C+ + + +++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFH 109
+S + T++ LI K + A + M M +G +P++ +SL+ H
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTH 549
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+++ C+ G + A ++ + YD DV NS++ C+ G+++ + + ++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEFLDQMITR 359
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T++ LI KE A + KG P+ +SLI L R H A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 120 LCL 122
+ L
Sbjct: 420 MEL 422
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ EA+++ + E + V N+++ C++ +E +M ++
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
PD T++ L+ +F + A + M G +P+ +LI L G++ S
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 118 EALCLQHVKDIA 129
+ L +K IA
Sbjct: 596 KLLRSIQMKGIA 607
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC+ G +AKQ+ + DVV ++++ CR M ++ ++ +
Sbjct: 370 LIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSG 429
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
I P+ + LI Y+ K +A + VD++++G L ++ + H +RA
Sbjct: 430 ILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRG------LVANPVIHNALLRA 478
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+GG +AKQ D N++L C+ G ++ + + K+ +
Sbjct: 545 LLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKMRAHS 117
PD +T+ IL+ F ++ + A + M +KG P+ + L+ L G+++A S
Sbjct: 605 CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 664
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ A L D +++ + + ++ +C+ G++ +++ + E
Sbjct: 335 LLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDG 394
Query: 61 ISPDYNTFHILIKYF-RKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD T+ LI R KM+ + M K G P + L ++LI + K A
Sbjct: 395 IDPDVVTYSALINGMCRMAKMHE-TKEILSRMQKSGILPNDVLYTTLICYYCK--AGYVK 451
Query: 120 LCLQHVKDI 128
+ L+H DI
Sbjct: 452 VALKHFVDI 460
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
V +M+ YCR ++ + V+ +++ + P T+ L+ + K M A M
Sbjct: 293 SVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLM 352
Query: 89 VDMHKKGHQPEEELCSSLI 107
VD+ +G + +C+ LI
Sbjct: 353 VDLKSRGITINKTMCTILI 371
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+G E A ++ + +VV ++L + GDM+ + V R++ +
Sbjct: 197 LLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRG 256
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ +L+ F + + A R M M G +P E +I K + EA+
Sbjct: 257 WSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAV 316
Query: 121 CLQHVKD-IAKD 131
L ++D IAKD
Sbjct: 317 NL--IEDMIAKD 326
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
DV ++ +CR G + I VM +++ + P+ T+ ++I+ + KEK A +
Sbjct: 260 DVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLI 319
Query: 89 VDMHKKGHQPEEELCSSLI 107
DM K ELC ++
Sbjct: 320 EDMIAKDLVVGSELCCKVV 338
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C GG EA +L D K + N ++ +C+ G+ + I V+ ++ E
Sbjct: 407 LIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENR 466
Query: 61 ISPDYNTFHILI 72
P+ +T+ ILI
Sbjct: 467 CLPNKSTYTILI 478
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +C+ G + A+ L RD E K +VV +S++ Y + G ++ + +M+K+ +
Sbjct: 302 MIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQN 361
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL--GKMRAHSE 118
I P+ + LI K A +M G + + + I +L G+ +E
Sbjct: 362 IMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAE 421
Query: 119 ALC 121
LC
Sbjct: 422 GLC 424
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTMVD 90
+ +M+ YC+ GDM+ ++R +++ + P+ T+ +I + K+ M +A R M
Sbjct: 297 ITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356
Query: 91 MHKKGHQPEEELCSSLI 107
M + P + ++LI
Sbjct: 357 MLDQNIMPNAYIYATLI 373
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA+C+ EA L + + DVV +S++ C+ G + ++R++D++
Sbjct: 162 LISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMG 221
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P++ + IL+ K ++ M G + +C++LI L K EA
Sbjct: 222 VNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEA 280
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I + + G A +A VV N ++C +CR D+ + + E
Sbjct: 184 LIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERG 243
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL---GKM 113
++P T+ ILI F KE A+ + +M K G + + + L+ L GKM
Sbjct: 244 LAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKM 299
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 50/120 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I +CR G F+ A+ L + K ++VV N ++ CR ++ + + +
Sbjct: 114 LIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREG 173
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF++LI + K A M G P + LI ++R + A+
Sbjct: 174 IRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAV 233
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI +FC G + +A QL R K D+V ++++ A+ + + + +++ +
Sbjct: 96 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 155
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I P T++ +I F K+ A R + M KG P+ S+LI
Sbjct: 156 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI 202
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +C+ + ++ + + + V +++ +C+ GD+++ ++ ++
Sbjct: 201 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 260
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHL 110
++PDY TFH ++ +K A+ + D+ K E+C LIF L
Sbjct: 261 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS------EVCPRLIFFL 304
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ C+ G A+ L + K +V+ N M+ ++C +G ++R + E
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 61 ISPDYNTFHILIKYFRKEK 79
I+PD TF LI F KE+
Sbjct: 121 INPDIVTFSALINAFVKER 139
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I CR G +A ++ R E DV N+++ YCR G +++ R + +
Sbjct: 81 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA---ARRLIGSMP 137
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
++PD T+ LI+ A + DM ++G QP
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQP 175
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ FE+A + + AK ++V N ++ CR G ++ ++ +L
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI--FHLGKMRAHSE 118
PD ++ L+K K + +M +K P E LI F G M +
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA- 301
Query: 119 ALCLQHVKDIAKDRCA 134
+Q ++ + + CA
Sbjct: 302 ---IQVLQQMTEHECA 314
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FCRGG E A Q+ + + L N ++ + C+ G ++ + +
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+PD ++ ++K + + + A + +M + P E ++ I
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFI 394
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS +C+ G ++A + D + + V N ++ Y + DMES + + +L +
Sbjct: 159 VISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHS 218
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI + + A R ++M + QP S +I L +EAL
Sbjct: 219 CPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEAL 278
Query: 121 CLQHVKDIAKDRCAMPFMRKFFI 143
L ++ D F+ I
Sbjct: 279 SLLRELNMRADIVPQTFIYNPII 301
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
M+ A + EEA +L +++E+ YD + N +L YC+ G +E +++ + +
Sbjct: 317 MLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQ 376
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTM-----VDMHKKGHQPEEELCSSLIFHLGK 112
+P N++ I+ + ++ A+ M V KG +P+ L SS++ LG+
Sbjct: 377 KNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWLGE 433
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 34 NSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHI 70
N ++C Y RTG +E V V+ ++ E I+PD ++ I
Sbjct: 175 NDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRI 211
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A + +A L R E ++ D V N++ +CR D + ++R++ E
Sbjct: 181 LLDALVKSRRASKAASLVRALEQRFPP-DAVTYNTLADGWCRVKDTSRALDILRQMVESG 239
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I+P T++I++K F + A+ + M ++G E
Sbjct: 240 IAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDE 278
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C G ++A A+ + D V +++ C+TG+ ++V ++RKL+ +
Sbjct: 133 LIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHS 192
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I K K+ A +M KG P+ ++LI M EA
Sbjct: 193 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAF 252
Query: 121 CLQH---VKDIAKDRCA 134
L + +K+I + C
Sbjct: 253 SLLNEMKLKNINPNVCT 269
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI+ C+ +EA L + + K D+V NS++ C+ +E I + +++ E
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ IL+ K A + KG+ + LI L K EAL
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462
Query: 121 CLQHVKDIAKDRCAMP 136
L K +D+ MP
Sbjct: 463 DL---KSKMEDKGCMP 475
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I++ C+ +A + + K DVV +++ +C G ++ ++ ++
Sbjct: 203 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN 262
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ TF+ILI KE A + M K +P+ +SLI
Sbjct: 263 INPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLI 309
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A C+ G +EAK + + + VV N+++ YC ++ HV+ + +
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR 328
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
++P+ +++I+I F K KM A +M +G P + +SLI L K
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCK 380
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 44/96 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G A +L + D+V NS++ +C+ ++ I +++K+ E
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGH 96
I P+ T++ILI K A D+ KG+
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGY 469
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ +A L + K VV +S++ +C G + + ++
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
I+PD TF+IL+ KE A + M K+G +P
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEP 296
>gi|296424573|ref|XP_002841822.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638071|emb|CAZ86013.1| unnamed protein product [Tuber melanosporum]
Length = 1048
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+IS R G K+L F ++D +++ NS++ AY R G++ V+ + +
Sbjct: 460 LISEMARHGEARVVKELLDQFLERFDPEELLPFNSLMFAYARRGELGEVVKCFDAIPKFG 519
Query: 61 ISPDYNTFHILIKYFRKEK 79
+ PD +++ILI + K +
Sbjct: 520 LVPDNYSYNILINAYAKAQ 538
>gi|294461912|gb|ADE76512.1| unknown [Picea sitchensis]
Length = 224
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
+ A C G EA+ L K D L N+++ YC+ + + +K+D
Sbjct: 1 MDALCNGKNMREARNLLDGMLESGCKPDGFLYNTLMKGYCKINKANEALEIYKKMDAEGC 60
Query: 62 SPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+PD TF+ LI K A + + M + GH P+ +SL+
Sbjct: 61 APDVVTFNTLIFGLSKVAKVDEAKKFLKLMVRAGHPPDVITYTSLM 106
>gi|15220863|ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80880, mitochondrial; Flags: Precursor
gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535 Domain of unknown function [Arabidopsis thaliana]
gi|91806121|gb|ABE65789.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198342|gb|AEE36463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ R CF+EA +L + + K D V NSM+ C G ++ +V+ +
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISEN 394
Query: 61 ISPDYNTFHILIKYFRKEK-MYMLAYRTMVDMHK-------------KGHQPEEEL 102
+SP +TFH ++ EK + +L + D+ KG QPE L
Sbjct: 395 LSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENAL 450
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVIHVMRKLDEL 59
++ A CR G E+A++ K DV N +L +C D+ + R++
Sbjct: 230 LLCALCRHGHIEKAEEFMLA-SKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNY 288
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ +++ +I F K + R +M K+G P E+ +SL++ L + EA
Sbjct: 289 CITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEA 348
Query: 120 LCL 122
+ L
Sbjct: 349 MKL 351
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I AFC+ G EA++ ++ + DVV N+++ C+ G + ++ ++ E
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 61 -ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ +I K M + A + + M K G P+ +++I L K EA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ F EAK++ + +A D ++++ C+ +E ++R++
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD + +I F K + A +T+ +M K+ P+ +++I L K+ +EA
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 286
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+AF R EEA +L + + ++V N ++ A C+ + + V++K+ E
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P+ TF+ L+ F K A + + M KG +P S+LI L K + EA
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 181
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC+ G ++A++L AK + +VV ++++ C++ V+ ++
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
++PD T+ LI K A + + M G P+ + SS+I
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI F G E A + D +++ DV+ N+M+ YCR ME ++
Sbjct: 156 MIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKN 215
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P T+ LIK + A R + +M G +P S+L+ L SEA
Sbjct: 216 IEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEA 274
>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C+ G + A + D++ N++L A C+ G ++ +H++ L++
Sbjct: 381 LINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTR 440
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++I+I K+ A +M ++G P++ +L + L ++ +AL
Sbjct: 441 CSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDAL 500
Query: 121 CL 122
+
Sbjct: 501 VI 502
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA L + + DV NSM+ +C G ++ + + LDE+
Sbjct: 216 VIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKL---LDEMV 272
Query: 61 IS----PDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+ PD TF+ILI K AY + M K+G +P+
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPD 315
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G EA + + K D+V N+++ YC +G + V K+ E
Sbjct: 287 LIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT 346
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGK 112
P+ ++ LI + K +M A + +MH K P+ + L+ L K
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSK 398
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
I PD + +I K+ + A +M +KG P
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ + ++R++
Sbjct: 407 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A +M G P+ C+ L++ + EAL
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 121 CLQHVKDIAK 130
L V ++K
Sbjct: 523 ELFEVIQMSK 532
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ FC EEA +L + D V N ++ C+ ++ + L
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T++++I F + A M GH+P+ ++LI
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P+ T++ +I F + A R + DM ++ P+ ++LI
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ C+ G E+A+++ + V+ N+++ YC+ GDM+ I + +++
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ F+ +I F + +M A + M KG P E + LI G++ S
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR-- 365
Query: 121 CLQHVKDIAKD 131
C Q ++++ ++
Sbjct: 366 CFQILEEMEEN 376
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I C+ G +EA+++ + DV+ NS++ Y G+ + + + + +L
Sbjct: 458 LIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLG 517
Query: 61 ISPDYNTFHILIKYFRKE--KMYMLAYRTMVDMH 92
+ P NTFH LI KE K+ + M+ M+
Sbjct: 518 LKPTINTFHPLISGCSKEGIKLKETLFNEMLQMN 551
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISPDYNTFHILIKYFRKEKMYMLAYRTM 88
D V+ N+M+ Y TG ++ + +++ ++ + PD T++ LI KE +
Sbjct: 555 DRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLV 614
Query: 89 VDMHKKGHQPEEELCSSLI 107
DM KG PE + S LI
Sbjct: 615 DDMKAKGLIPEADTYSLLI 633
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ +C+ G + A E++ + + + NS++ +C ++ ++K+
Sbjct: 283 IVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKG 342
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
I+P T++ILI + + ++ ++ + +M + G +P SLI
Sbjct: 343 IAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLI 389
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ A+ + G F E + + ++ K DV +NS L A+ +G +E + K
Sbjct: 263 LVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQASG 322
Query: 61 ISPDYNTFHILIKYFRKEKMY 81
ISP+ T++IL+ + K KMY
Sbjct: 323 ISPNIKTYNILLDSYGKAKMY 343
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ +CR G A +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+ + K A+ M + G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 CL 122
L
Sbjct: 295 AL 296
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ +EA+Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 CL 122
L
Sbjct: 505 AL 506
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ CR G + A LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ F + + A R ++DM K+ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LCL 122
L
Sbjct: 259 FDL 261
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 36/71 (50%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I+ C G F+EAK + K D N+M+ ++CR G+ + ++ ++ +I
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 62 SPDYNTFHILI 72
P+ T++ L+
Sbjct: 621 KPNLITYNTLV 631
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 2 ISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAI 61
I +CR EEA L DVV L++++ CR G + R++D++
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305
Query: 62 SPDYNTFHILIKYFRK 77
+P++ T+ LI K
Sbjct: 306 APNHVTYCTLIDSLAK 321
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++A R F+ L + E K D +LLN+++ A+ +G+++ + + +K++E
Sbjct: 98 LVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESG 157
Query: 61 ISPDYNTFHILIKYF---RK--EKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRA 115
P +TF+ LIK + RK E M +L T K P + L+ L K ++
Sbjct: 158 CKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLK----PNNRTYNILVGALCKKKS 213
Query: 116 HSEALCLQH 124
EA + H
Sbjct: 214 IKEAWNVVH 222
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVIHVMRKLDEL 59
+ F R G +A+ L +F +KY + +VV+ +++ +C G ME V + ++
Sbjct: 379 LAKGFVRAGEPVKAESLL-NFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDM 437
Query: 60 AISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPE 99
+SP+ TF LI + + K A + M + PE
Sbjct: 438 DVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPE 477
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I FC G +EA + E + + + N+++ YC+ +E + ++ E
Sbjct: 349 LIKIFCDEGMKKEALIFQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKG 408
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSE 118
+ P T++IL+ + + + +++MH G QP + LI G+ + SE
Sbjct: 409 LKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSE 466
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+ISA + ++A Q+ D ++ S++ YC +G + I + +K+
Sbjct: 249 IISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG 308
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLI 107
+ PD T+ L+ Y K A + + K+GH+P+ +L+
Sbjct: 309 VEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 355
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 4 AFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELAISP 63
C+ G A +L + +K + ++ NS++ C+ G++E + M +DE + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 64 DYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQP 98
D T+ +I + K A+ + +M KG +P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+++ FC G E K+L K + NS++ YC +M+S + + +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ NT++ILIK K + A +M +KG + ++LI L K + +EA
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I+ CR G +EA+++ ++ E K D V ++ YC+ G M V K+ +
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKG 95
++P+ T+ L K+ A + +M KG
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
+I A C+ + A L ++ K K +V N ++ +C +G +E ++ + E
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ L+K + EK M + P E + LI K R EAL
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 1 MISAFCRGGCFEEAKQLARDFEAKYDKYDVVLLNSMLCAYCRTGDMESVIHVMRKLDELA 60
++ +C+ G ++A ++ R K D VV N+ML + G ++ +++ R +
Sbjct: 1241 LVDMYCKCGSVQDAYRVFR----KMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG 1296
Query: 61 ISPDYNTFHILIKYFRKEKMYMLAYRTMVDMHKK-GHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF ++ ++ AY+ M K G PE E S L+ LG+ EA
Sbjct: 1297 IQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEA 1356
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.331 0.140 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,155,570,930
Number of Sequences: 23463169
Number of extensions: 75920703
Number of successful extensions: 239237
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2817
Number of HSP's successfully gapped in prelim test: 695
Number of HSP's that attempted gapping in prelim test: 218190
Number of HSP's gapped (non-prelim): 20378
length of query: 144
length of database: 8,064,228,071
effective HSP length: 108
effective length of query: 36
effective length of database: 9,825,173,115
effective search space: 353706232140
effective search space used: 353706232140
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 71 (32.0 bits)