Query 045405
Match_columns 240
No_of_seqs 275 out of 1862
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 22:57:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045405.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045405hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 7.3E-48 2.5E-52 326.9 21.5 193 29-222 1-199 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 1.1E-32 3.8E-37 259.4 16.4 162 65-230 288-454 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 2.5E-31 8.5E-36 251.9 19.0 159 64-226 322-485 (496)
4 3qac_A 11S globulin SEED stora 100.0 8E-32 2.7E-36 253.5 14.5 155 70-228 295-452 (465)
5 2e9q_A 11S globulin subunit be 100.0 5.9E-31 2E-35 248.0 15.4 155 70-228 294-451 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 1.1E-30 3.7E-35 247.9 14.4 161 64-228 358-523 (531)
7 2cav_A Protein (canavalin); vi 100.0 5.8E-30 2E-34 240.6 17.1 164 61-229 244-422 (445)
8 1uij_A Beta subunit of beta co 100.0 8.3E-30 2.8E-34 237.9 16.2 165 61-230 212-394 (416)
9 2ea7_A 7S globulin-1; beta bar 100.0 2.6E-29 8.9E-34 235.6 17.4 167 59-230 227-410 (434)
10 1fxz_A Glycinin G1; proglycini 100.0 6.1E-29 2.1E-33 235.3 19.3 157 70-230 310-469 (476)
11 3c3v_A Arachin ARAH3 isoform; 100.0 5E-29 1.7E-33 237.0 18.0 155 70-228 344-501 (510)
12 3s7i_A Allergen ARA H 1, clone 100.0 3.6E-29 1.2E-33 233.4 15.3 159 62-226 226-415 (418)
13 1dgw_A Canavalin; duplicated s 100.0 1.8E-28 6E-33 204.3 14.4 160 62-228 2-177 (178)
14 2d5f_A Glycinin A3B4 subunit; 100.0 1.2E-28 4.3E-33 234.0 14.5 158 64-226 331-491 (493)
15 2phl_A Phaseolin; plant SEED s 99.9 2.3E-26 7.8E-31 213.3 15.4 152 66-228 213-380 (397)
16 2e9q_A 11S globulin subunit be 99.9 3.3E-26 1.1E-30 215.7 14.3 151 76-231 42-248 (459)
17 3qac_A 11S globulin SEED stora 99.9 5.8E-26 2E-30 213.8 14.1 151 76-231 29-250 (465)
18 3ksc_A LEGA class, prolegumin; 99.9 1E-25 3.4E-30 213.6 14.7 154 76-234 25-234 (496)
19 1fxz_A Glycinin G1; proglycini 99.9 8.6E-26 2.9E-30 213.8 14.1 152 76-232 27-243 (476)
20 2cav_A Protein (canavalin); vi 99.9 2.6E-25 8.9E-30 209.0 16.1 167 61-232 46-226 (445)
21 2phl_A Phaseolin; plant SEED s 99.9 2.7E-25 9.3E-30 206.1 14.2 167 61-232 11-199 (397)
22 2ea7_A 7S globulin-1; beta bar 99.9 3.3E-25 1.1E-29 207.8 14.0 164 62-230 21-209 (434)
23 1uij_A Beta subunit of beta co 99.9 3.1E-25 1.1E-29 207.0 13.1 164 61-229 8-191 (416)
24 2d5f_A Glycinin A3B4 subunit; 99.9 2.1E-24 7.3E-29 204.9 14.6 153 76-233 24-245 (493)
25 3kgl_A Cruciferin; 11S SEED gl 99.9 1.8E-24 6E-29 203.7 13.8 154 75-233 21-260 (466)
26 3s7i_A Allergen ARA H 1, clone 99.9 2E-24 6.9E-29 201.4 13.0 151 62-219 5-170 (418)
27 3c3v_A Arachin ARAH3 isoform; 99.9 3.7E-24 1.3E-28 203.6 14.7 152 76-232 27-285 (510)
28 3fz3_A Prunin; TREE NUT allerg 99.9 3.1E-24 1.1E-28 203.7 13.8 156 74-234 25-313 (531)
29 2vqa_A SLL1358 protein, MNCA; 99.9 1.5E-23 5.1E-28 190.5 17.6 158 56-220 194-352 (361)
30 2vqa_A SLL1358 protein, MNCA; 99.9 3E-21 1E-25 175.4 16.8 151 63-220 20-173 (361)
31 1j58_A YVRK protein; cupin, de 99.8 3.7E-19 1.3E-23 163.1 17.4 155 60-221 222-376 (385)
32 1j58_A YVRK protein; cupin, de 99.8 1.8E-19 6.3E-24 165.1 11.9 148 64-219 48-197 (385)
33 1dgw_X Canavalin; duplicated s 99.7 8.3E-19 2.8E-23 127.9 4.9 74 66-140 4-78 (79)
34 3h8u_A Uncharacterized conserv 99.5 5.4E-14 1.8E-18 108.6 10.6 84 97-184 38-121 (125)
35 2xlg_A SLL1785 protein, CUCA; 99.5 9.3E-14 3.2E-18 120.6 9.7 82 95-176 40-137 (239)
36 3l2h_A Putative sugar phosphat 99.5 6E-13 2.1E-17 107.6 12.6 79 97-180 45-125 (162)
37 1lr5_A Auxin binding protein 1 99.5 6.7E-13 2.3E-17 107.5 12.6 114 97-215 40-158 (163)
38 1v70_A Probable antibiotics sy 99.4 9.8E-13 3.3E-17 96.9 11.5 78 95-177 25-102 (105)
39 2fqp_A Hypothetical protein BP 99.4 5.3E-13 1.8E-17 99.2 9.3 76 97-176 17-93 (97)
40 1x82_A Glucose-6-phosphate iso 99.4 6.4E-12 2.2E-16 105.0 15.8 82 97-178 66-155 (190)
41 2oa2_A BH2720 protein; 1017534 99.4 3.1E-12 1.1E-16 102.2 12.0 83 97-179 42-125 (148)
42 3i7d_A Sugar phosphate isomera 99.4 3.2E-12 1.1E-16 104.2 12.2 80 97-181 42-124 (163)
43 2gu9_A Tetracenomycin polyketi 99.4 4.3E-12 1.5E-16 95.1 11.6 78 96-178 19-98 (113)
44 3ibm_A Cupin 2, conserved barr 99.4 1.5E-11 5E-16 100.8 15.7 115 58-179 13-132 (167)
45 3ht1_A REMF protein; cupin fol 99.4 2.5E-12 8.5E-17 101.0 10.5 85 97-185 38-122 (145)
46 3lag_A Uncharacterized protein 99.4 4.9E-13 1.7E-17 100.5 6.1 78 96-175 15-92 (98)
47 3es1_A Cupin 2, conserved barr 99.3 4.8E-12 1.6E-16 104.7 9.9 80 96-181 77-156 (172)
48 4e2g_A Cupin 2 conserved barre 99.3 4.1E-12 1.4E-16 97.9 8.8 76 97-179 40-115 (126)
49 1o4t_A Putative oxalate decarb 99.3 7.8E-12 2.7E-16 98.2 10.5 77 95-176 54-130 (133)
50 3fjs_A Uncharacterized protein 99.3 6.3E-12 2.1E-16 96.4 9.2 71 96-172 34-104 (114)
51 3kgz_A Cupin 2 conserved barre 99.3 1.1E-11 3.9E-16 100.6 11.2 78 96-179 42-119 (156)
52 2pfw_A Cupin 2, conserved barr 99.3 4.3E-11 1.5E-15 90.7 13.6 75 97-179 33-107 (116)
53 3jzv_A Uncharacterized protein 99.3 5.2E-11 1.8E-15 97.7 14.7 77 96-178 51-127 (166)
54 2bnm_A Epoxidase; oxidoreducta 99.3 2.6E-11 9E-16 100.6 13.0 82 93-176 112-197 (198)
55 2ozi_A Hypothetical protein RP 99.3 5.5E-12 1.9E-16 95.0 7.1 78 97-176 16-93 (98)
56 2f4p_A Hypothetical protein TM 99.3 5E-11 1.7E-15 95.4 12.8 77 96-178 46-123 (147)
57 2b8m_A Hypothetical protein MJ 99.3 1.7E-11 5.9E-16 93.4 9.6 74 97-176 26-100 (117)
58 4i4a_A Similar to unknown prot 99.3 5.2E-11 1.8E-15 91.9 11.7 75 96-176 32-106 (128)
59 3cew_A Uncharacterized cupin p 99.3 1.8E-11 6E-16 94.6 8.9 79 95-178 23-102 (125)
60 2o8q_A Hypothetical protein; c 99.2 4.4E-11 1.5E-15 93.2 10.7 77 98-179 43-119 (134)
61 1vj2_A Novel manganese-contain 99.2 2.2E-11 7.6E-16 94.5 8.6 77 95-177 45-121 (126)
62 1yhf_A Hypothetical protein SP 99.2 9.1E-11 3.1E-15 88.7 10.8 72 97-176 39-110 (115)
63 1rc6_A Hypothetical protein YL 99.2 4.3E-11 1.5E-15 104.2 9.7 78 95-177 176-254 (261)
64 3h7j_A Bacilysin biosynthesis 99.2 8.5E-11 2.9E-15 101.4 11.3 79 97-181 144-223 (243)
65 2vpv_A Protein MIF2, MIF2P; nu 99.2 7.6E-11 2.6E-15 97.0 10.2 75 97-176 87-162 (166)
66 1y9q_A Transcriptional regulat 99.2 9.3E-11 3.2E-15 97.0 10.6 76 95-177 101-178 (192)
67 2q30_A Uncharacterized protein 99.2 2E-10 6.9E-15 85.7 9.7 76 96-177 31-107 (110)
68 1sef_A Conserved hypothetical 99.1 5.3E-10 1.8E-14 98.1 13.5 76 96-177 180-257 (274)
69 1y3t_A Hypothetical protein YX 99.1 3.6E-10 1.2E-14 100.7 12.0 77 97-179 45-121 (337)
70 2ozj_A Cupin 2, conserved barr 99.1 5.1E-10 1.7E-14 84.8 11.0 72 97-176 37-108 (114)
71 2d40_A Z3393, putative gentisa 99.1 4.6E-10 1.6E-14 102.3 12.0 91 77-177 248-339 (354)
72 2d40_A Z3393, putative gentisa 99.1 4E-10 1.4E-14 102.7 10.4 76 97-177 99-174 (354)
73 1dgw_Y Canavalin; duplicated s 99.1 1.4E-09 4.7E-14 81.2 11.0 79 141-224 5-87 (93)
74 1juh_A Quercetin 2,3-dioxygena 99.1 7.8E-10 2.7E-14 100.6 11.4 80 97-178 47-129 (350)
75 1y3t_A Hypothetical protein YX 99.1 2.1E-09 7.3E-14 95.7 13.6 74 100-179 219-293 (337)
76 3lwc_A Uncharacterized protein 99.1 8.1E-10 2.8E-14 85.7 9.5 73 97-177 39-111 (119)
77 1sfn_A Conserved hypothetical 99.1 2.4E-09 8.1E-14 92.7 13.5 77 95-177 162-239 (246)
78 2i45_A Hypothetical protein; n 99.0 5.9E-10 2E-14 83.6 7.6 68 100-174 30-97 (107)
79 1rc6_A Hypothetical protein YL 99.0 9.8E-10 3.4E-14 95.6 9.9 77 96-177 57-134 (261)
80 3h7j_A Bacilysin biosynthesis 99.0 1.1E-09 3.6E-14 94.5 9.8 74 98-177 34-108 (243)
81 4h7l_A Uncharacterized protein 99.0 4E-09 1.4E-13 85.9 12.2 97 67-179 21-119 (157)
82 1sq4_A GLXB, glyoxylate-induce 99.0 1.1E-09 3.9E-14 96.6 9.4 76 96-177 66-143 (278)
83 2opk_A Hypothetical protein; p 99.0 2.2E-09 7.7E-14 81.9 9.7 76 96-177 29-109 (112)
84 2pyt_A Ethanolamine utilizatio 99.0 1.5E-09 5.2E-14 85.8 8.3 71 97-177 56-126 (133)
85 3bu7_A Gentisate 1,2-dioxygena 99.0 3.7E-09 1.3E-13 97.8 11.8 79 95-178 120-199 (394)
86 3d82_A Cupin 2, conserved barr 99.0 1.8E-09 6.1E-14 79.4 7.9 53 109-166 40-92 (102)
87 3bu7_A Gentisate 1,2-dioxygena 99.0 1.1E-08 3.8E-13 94.5 14.7 93 78-177 275-368 (394)
88 3rns_A Cupin 2 conserved barre 99.0 2.7E-09 9.1E-14 91.1 9.7 73 97-176 152-224 (227)
89 3nw4_A Gentisate 1,2-dioxygena 99.0 2.3E-09 7.7E-14 98.3 9.8 78 96-178 101-178 (368)
90 4e2q_A Ureidoglycine aminohydr 98.9 1.3E-08 4.3E-13 89.6 13.8 76 95-176 183-259 (266)
91 1sq4_A GLXB, glyoxylate-induce 98.9 4.6E-09 1.6E-13 92.6 11.1 82 91-178 184-266 (278)
92 1sef_A Conserved hypothetical 98.9 2E-09 7E-14 94.3 8.7 77 96-177 60-137 (274)
93 3rns_A Cupin 2 conserved barre 98.9 5.9E-09 2E-13 89.0 9.8 73 97-177 36-108 (227)
94 1vr3_A Acireductone dioxygenas 98.9 1.9E-08 6.5E-13 84.4 12.2 84 99-184 75-168 (191)
95 4b29_A Dimethylsulfoniopropion 98.9 8E-09 2.7E-13 88.0 9.9 77 95-177 129-205 (217)
96 4axo_A EUTQ, ethanolamine util 98.8 1.1E-08 3.7E-13 82.8 9.0 71 97-177 65-135 (151)
97 4e2q_A Ureidoglycine aminohydr 98.8 1.8E-08 6.2E-13 88.6 8.8 75 96-177 68-142 (266)
98 3ebr_A Uncharacterized RMLC-li 98.7 6.4E-08 2.2E-12 78.8 9.7 74 97-178 41-116 (159)
99 1o5u_A Novel thermotoga mariti 98.7 3.3E-08 1.1E-12 74.5 6.6 62 102-170 35-96 (101)
100 3bcw_A Uncharacterized protein 98.7 3.3E-08 1.1E-12 77.1 6.3 67 97-169 48-114 (123)
101 2q1z_B Anti-sigma factor CHRR, 98.7 5.3E-08 1.8E-12 81.7 8.0 70 98-177 125-194 (195)
102 1zrr_A E-2/E-2' protein; nicke 98.6 1.5E-08 5E-13 84.2 4.2 70 111-183 93-162 (179)
103 1sfn_A Conserved hypothetical 98.6 8.7E-08 3E-12 82.7 8.6 71 97-177 49-119 (246)
104 1juh_A Quercetin 2,3-dioxygena 98.6 3.8E-07 1.3E-11 82.8 11.1 79 92-177 243-325 (350)
105 2y0o_A Probable D-lyxose ketol 98.5 4.4E-07 1.5E-11 75.0 9.8 78 98-179 53-154 (175)
106 2o1q_A Putative acetyl/propion 98.5 5.5E-08 1.9E-12 77.7 3.9 76 97-179 43-120 (145)
107 3eqe_A Putative cystein deoxyg 98.5 1.7E-06 6E-11 71.2 13.0 85 97-181 68-156 (171)
108 3cjx_A Protein of unknown func 98.5 2.1E-07 7E-12 76.3 6.6 74 97-177 42-117 (165)
109 1yfu_A 3-hydroxyanthranilate-3 98.5 1.2E-06 4.2E-11 72.0 11.1 60 105-166 42-101 (174)
110 3nw4_A Gentisate 1,2-dioxygena 98.4 2.6E-06 9.1E-11 77.9 13.3 88 79-176 260-349 (368)
111 3st7_A Capsular polysaccharide 98.4 1.4E-06 4.7E-11 78.1 10.5 77 99-177 273-354 (369)
112 3d0j_A Uncharacterized protein 98.4 9.6E-07 3.3E-11 70.2 7.6 60 108-167 39-101 (140)
113 2gm6_A Cysteine dioxygenase ty 98.4 4.8E-06 1.7E-10 70.5 12.2 81 97-178 78-167 (208)
114 2arc_A ARAC, arabinose operon 98.2 1E-05 3.5E-10 63.6 10.7 58 112-175 32-90 (164)
115 1zvf_A 3-hydroxyanthranilate 3 98.2 6.6E-06 2.3E-10 67.6 9.1 58 106-165 42-103 (176)
116 3o14_A Anti-ecfsigma factor, C 98.2 6.2E-06 2.1E-10 70.5 8.8 69 97-177 42-110 (223)
117 3eln_A Cysteine dioxygenase ty 98.1 4.5E-05 1.6E-09 64.1 13.2 85 97-181 69-162 (200)
118 2qnk_A 3-hydroxyanthranilate 3 98.1 1E-05 3.6E-10 71.1 9.0 58 107-166 40-97 (286)
119 3bal_A Acetylacetone-cleaving 98.1 3.4E-06 1.2E-10 68.3 5.3 91 77-177 30-120 (153)
120 3myx_A Uncharacterized protein 97.8 0.00017 6E-09 62.1 11.3 76 97-181 46-122 (238)
121 3ejk_A DTDP sugar isomerase; Y 97.8 0.00019 6.4E-09 59.1 10.6 81 103-183 58-148 (174)
122 3uss_A Putative uncharacterize 97.7 0.00067 2.3E-08 57.4 13.2 81 97-178 72-161 (211)
123 3es4_A Uncharacterized protein 97.7 0.00019 6.6E-09 55.3 8.6 62 98-165 42-103 (116)
124 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.6 0.0008 2.7E-08 53.5 12.0 96 77-177 15-113 (141)
125 1yud_A Hypothetical protein SO 97.5 0.0019 6.4E-08 52.9 12.9 132 76-217 26-165 (170)
126 3myx_A Uncharacterized protein 97.4 0.00077 2.6E-08 58.1 10.0 63 97-165 166-228 (238)
127 3gbg_A TCP pilus virulence reg 97.4 0.0012 4.2E-08 56.4 10.7 73 97-173 6-82 (276)
128 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 97.0 0.003 1E-07 52.9 9.0 77 105-183 67-150 (197)
129 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.0 0.0057 2E-07 50.6 10.6 71 106-177 56-136 (185)
130 2vec_A YHAK, pirin-like protei 97.0 0.0024 8.2E-08 55.5 8.6 72 100-175 66-140 (256)
131 1vrb_A Putative asparaginyl hy 97.0 0.0037 1.3E-07 56.3 10.0 71 103-174 145-250 (342)
132 2ixk_A DTDP-4-dehydrorhamnose 96.9 0.0075 2.6E-07 49.9 10.4 71 106-177 57-137 (184)
133 3ryk_A DTDP-4-dehydrorhamnose 96.9 0.0047 1.6E-07 52.0 9.1 68 106-174 78-156 (205)
134 3o14_A Anti-ecfsigma factor, C 96.8 0.0014 4.9E-08 55.8 5.2 65 98-174 146-210 (223)
135 1oi6_A PCZA361.16; epimerase, 96.8 0.017 5.9E-07 48.5 11.8 70 106-176 55-135 (205)
136 1tq5_A Protein YHHW; bicupin, 96.7 0.0078 2.7E-07 51.8 9.0 72 100-175 43-117 (242)
137 3kmh_A D-lyxose isomerase; cup 96.7 0.0042 1.4E-07 53.3 7.2 77 98-174 106-205 (246)
138 1dzr_A DTDP-4-dehydrorhamnose 96.6 0.015 5E-07 48.1 10.3 69 106-175 55-134 (183)
139 1wlt_A 176AA long hypothetical 96.6 0.011 3.6E-07 49.5 9.4 69 105-174 72-151 (196)
140 4gjz_A Lysine-specific demethy 96.6 0.0042 1.4E-07 51.5 6.7 65 101-166 126-225 (235)
141 3bb6_A Uncharacterized protein 96.6 0.014 4.7E-07 45.5 8.9 70 107-177 23-100 (127)
142 4hn1_A Putative 3-epimerase in 96.5 0.014 4.8E-07 48.9 9.5 68 106-174 52-130 (201)
143 2c0z_A NOVW; isomerase, epimer 96.5 0.02 6.8E-07 48.5 10.2 68 106-174 63-141 (216)
144 1upi_A DTDP-4-dehydrorhamnose 96.5 0.028 9.7E-07 47.9 11.1 68 106-174 74-152 (225)
145 3d8c_A Hypoxia-inducible facto 96.3 0.016 5.6E-07 52.1 9.2 73 103-176 187-296 (349)
146 2qdr_A Uncharacterized protein 96.1 0.048 1.6E-06 47.4 10.7 73 95-177 88-161 (303)
147 2xdv_A MYC-induced nuclear ant 95.9 0.05 1.7E-06 50.7 10.8 65 101-166 141-223 (442)
148 3al5_A HTYW5, JMJC domain-cont 95.6 0.036 1.2E-06 49.6 8.4 72 101-175 169-271 (338)
149 2qjv_A Uncharacterized IOLB-li 95.6 0.063 2.1E-06 46.9 9.4 94 80-178 138-247 (270)
150 4diq_A Lysine-specific demethy 95.5 0.081 2.8E-06 49.9 10.4 74 101-175 166-261 (489)
151 1e5r_A Proline oxidase; oxidor 95.1 0.034 1.2E-06 49.1 6.1 71 97-169 90-167 (290)
152 1eyb_A Homogentisate 1,2-dioxy 94.7 0.14 4.7E-06 47.9 9.4 57 111-174 170-226 (471)
153 3k2o_A Bifunctional arginine d 94.6 0.092 3.1E-06 47.2 7.9 66 102-167 175-281 (336)
154 2p17_A Pirin-like protein; GK1 94.4 0.27 9.1E-06 42.9 10.2 66 104-173 45-112 (277)
155 2yu1_A JMJC domain-containing 94.1 0.12 4E-06 48.3 7.6 78 103-180 200-304 (451)
156 3kv5_D JMJC domain-containing 93.7 0.094 3.2E-06 49.5 6.2 65 103-167 270-361 (488)
157 2qnk_A 3-hydroxyanthranilate 3 93.6 0.27 9.3E-06 43.1 8.5 53 105-165 214-267 (286)
158 3rcq_A Aspartyl/asparaginyl be 93.5 0.46 1.6E-05 39.5 9.4 88 88-181 91-184 (197)
159 3kv4_A PHD finger protein 8; e 93.4 0.2 6.9E-06 46.7 7.8 65 103-167 235-326 (447)
160 1j1l_A Pirin; beta sandwich, c 93.2 0.63 2.1E-05 40.8 10.3 70 100-173 42-114 (290)
161 3kv9_A JMJC domain-containing 92.9 0.16 5.6E-06 46.6 6.3 64 103-166 179-269 (397)
162 3k3o_A PHF8, PHD finger protei 92.8 0.18 6E-06 46.0 6.3 65 103-167 151-242 (371)
163 1xru_A 4-deoxy-L-threo-5-hexos 92.4 1.2 4.2E-05 38.9 10.9 81 97-180 179-266 (282)
164 1ywk_A 4-deoxy-L-threo-5-hexos 91.1 1.4 4.9E-05 38.6 9.9 81 97-180 179-266 (289)
165 3m3i_A Putative uncharacterize 90.7 3.6 0.00012 34.8 11.6 132 76-218 33-211 (225)
166 3pua_A GRC5, PHD finger protei 90.7 0.41 1.4E-05 43.9 6.3 65 103-167 178-269 (392)
167 3loi_A Putative uncharacterize 90.4 6.2 0.00021 32.0 13.2 128 76-217 24-168 (172)
168 3dv8_A Transcriptional regulat 89.6 1.2 4.1E-05 35.6 7.7 127 101-230 27-203 (220)
169 2rg4_A Uncharacterized protein 89.4 1 3.5E-05 37.6 7.3 75 100-174 105-202 (216)
170 2oyz_A UPF0345 protein VPA0057 88.8 1.4 4.7E-05 32.3 6.7 56 104-165 29-84 (94)
171 3pur_A Lysine-specific demethy 88.7 0.53 1.8E-05 44.7 5.5 64 103-166 300-390 (528)
172 1qwr_A Mannose-6-phosphate iso 88.1 2 6.7E-05 38.0 8.6 59 97-163 250-308 (319)
173 3hqx_A UPF0345 protein aciad03 87.4 2 6.9E-05 32.4 7.0 66 104-175 43-108 (111)
174 3dl3_A Tellurite resistance pr 86.9 4 0.00014 31.1 8.5 55 121-177 40-98 (119)
175 1pmi_A PMI, phosphomannose iso 86.9 2.9 9.9E-05 38.7 9.3 76 97-176 356-437 (440)
176 1tq5_A Protein YHHW; bicupin, 86.9 2.1 7.1E-05 36.5 7.7 69 96-175 158-226 (242)
177 2wfp_A Mannose-6-phosphate iso 86.4 1.2 4.2E-05 40.6 6.4 58 97-162 323-380 (394)
178 1j1l_A Pirin; beta sandwich, c 86.3 7.6 0.00026 33.8 11.3 76 96-176 167-242 (290)
179 2vec_A YHAK, pirin-like protei 85.7 3.7 0.00013 35.2 8.8 71 96-173 180-250 (256)
180 2p17_A Pirin-like protein; GK1 84.0 4.6 0.00016 35.0 8.7 70 96-174 165-239 (277)
181 2pqq_A Putative transcriptiona 82.3 3.5 0.00012 30.3 6.4 52 100-152 28-80 (149)
182 1zx5_A Mannosephosphate isomer 82.3 3.7 0.00013 35.9 7.5 57 97-163 229-286 (300)
183 3mdp_A Cyclic nucleotide-bindi 81.4 2.7 9.3E-05 30.7 5.5 53 100-153 29-85 (142)
184 1xe7_A YML079WP, hypothetical 80.3 24 0.00081 29.2 11.4 111 98-219 79-200 (203)
185 3dn7_A Cyclic nucleotide bindi 79.9 5.5 0.00019 31.0 7.1 52 101-153 31-83 (194)
186 3eo6_A Protein of unknown func 79.3 2.4 8.2E-05 31.7 4.4 55 104-164 42-96 (106)
187 4ev0_A Transcription regulator 78.9 6.1 0.00021 31.1 7.2 128 101-231 23-198 (216)
188 2oz6_A Virulence factor regula 78.9 6.1 0.00021 30.9 7.1 128 101-231 14-199 (207)
189 2qjv_A Uncharacterized IOLB-li 78.2 20 0.00068 31.0 10.6 70 98-173 29-106 (270)
190 3iwz_A CAP-like, catabolite ac 77.9 6.9 0.00024 31.1 7.3 128 101-231 35-222 (230)
191 3e97_A Transcriptional regulat 77.4 7 0.00024 31.3 7.2 125 100-230 29-209 (231)
192 3ryp_A Catabolite gene activat 77.3 7.3 0.00025 30.5 7.2 128 101-231 20-202 (210)
193 3fx3_A Cyclic nucleotide-bindi 77.2 6.4 0.00022 31.6 6.9 129 101-236 35-216 (237)
194 3d0s_A Transcriptional regulat 77.0 8.3 0.00028 30.7 7.5 125 102-231 31-212 (227)
195 3gyd_A CNMP-BD protein, cyclic 75.9 7.6 0.00026 30.4 6.9 52 100-152 62-114 (187)
196 3b02_A Transcriptional regulat 75.7 7.4 0.00025 30.4 6.8 124 104-231 3-174 (195)
197 3la7_A Global nitrogen regulat 74.1 9.5 0.00032 31.0 7.3 128 100-230 43-227 (243)
198 2z69_A DNR protein; beta barre 74.1 3.2 0.00011 30.7 4.0 52 100-152 35-87 (154)
199 1o5l_A Transcriptional regulat 73.2 6.8 0.00023 31.2 6.0 128 100-230 22-198 (213)
200 3idb_B CAMP-dependent protein 73.1 10 0.00035 28.5 6.8 51 100-152 61-112 (161)
201 3e6c_C CPRK, cyclic nucleotide 72.7 10 0.00035 30.9 7.1 129 100-231 32-212 (250)
202 3kcc_A Catabolite gene activat 72.6 10 0.00034 31.3 7.1 129 100-231 69-252 (260)
203 1zyb_A Transcription regulator 71.8 6.6 0.00023 31.7 5.7 129 100-231 43-221 (232)
204 2ypd_A Probable JMJC domain-co 71.4 3.1 0.00011 38.0 3.8 36 142-177 293-328 (392)
205 1ft9_A Carbon monoxide oxidati 71.2 20 0.00067 28.4 8.4 127 100-232 23-199 (222)
206 2gau_A Transcriptional regulat 71.1 6.7 0.00023 31.4 5.5 129 100-231 33-215 (232)
207 2zcw_A TTHA1359, transcription 71.1 10 0.00034 29.7 6.5 125 102-230 7-180 (202)
208 2bgc_A PRFA; bacterial infecti 71.0 9 0.00031 31.0 6.4 126 102-231 20-205 (238)
209 1zx5_A Mannosephosphate isomer 70.6 3.2 0.00011 36.3 3.7 45 119-163 117-179 (300)
210 1znp_A Hypothetical protein AT 70.1 39 0.0013 26.7 13.2 103 76-185 19-130 (154)
211 2ptm_A Hyperpolarization-activ 69.3 10 0.00034 29.8 6.1 49 100-152 94-142 (198)
212 4ava_A Lysine acetyltransferas 69.0 11 0.00037 32.2 6.7 52 100-152 36-87 (333)
213 1qwr_A Mannose-6-phosphate iso 68.2 3.9 0.00013 36.1 3.7 45 119-163 117-179 (319)
214 2fmy_A COOA, carbon monoxide o 65.2 35 0.0012 26.8 8.7 127 100-235 27-206 (220)
215 2qcs_B CAMP-dependent protein 64.2 21 0.00072 29.4 7.5 52 100-152 180-233 (291)
216 3bpz_A Potassium/sodium hyperp 63.9 10 0.00036 29.8 5.2 48 100-152 95-142 (202)
217 2wfp_A Mannose-6-phosphate iso 60.9 7 0.00024 35.5 4.0 23 142-164 240-262 (394)
218 3g7d_A PHPD; non heme Fe(II) d 56.2 35 0.0012 30.7 7.5 42 121-163 356-397 (443)
219 1o7f_A CAMP-dependent RAP1 gua 55.9 21 0.00073 31.9 6.4 54 100-154 65-121 (469)
220 2d93_A RAP guanine nucleotide 55.2 17 0.00059 26.2 4.8 48 100-152 39-87 (134)
221 1xsq_A Ureidoglycolate hydrola 54.5 35 0.0012 27.2 6.7 77 97-173 53-137 (168)
222 3pna_A CAMP-dependent protein 54.1 41 0.0014 24.8 6.9 48 100-152 61-108 (154)
223 1ywk_A 4-deoxy-L-threo-5-hexos 53.1 61 0.0021 28.2 8.5 66 103-173 62-130 (289)
224 2xxz_A Lysine-specific demethy 52.0 14 0.00047 33.0 4.3 31 142-172 279-309 (332)
225 3ocp_A PRKG1 protein; serine/t 51.7 38 0.0013 24.4 6.2 48 100-152 46-93 (139)
226 4f8a_A Potassium voltage-gated 51.6 35 0.0012 25.0 6.1 49 101-154 51-99 (160)
227 2bdr_A Ureidoglycolate hydrola 48.1 43 0.0015 26.9 6.3 77 98-174 56-140 (175)
228 3dkw_A DNR protein; CRP-FNR, H 47.9 6 0.0002 31.5 1.2 128 100-230 32-212 (227)
229 1vp6_A CNBD, cyclic-nucleotide 47.7 19 0.00065 25.9 3.9 45 101-152 35-79 (138)
230 3tnp_B CAMP-dependent protein 47.6 48 0.0016 29.6 7.3 51 100-152 168-219 (416)
231 1pmi_A PMI, phosphomannose iso 47.3 16 0.00053 33.8 4.0 22 143-164 267-288 (440)
232 1xru_A 4-deoxy-L-threo-5-hexos 40.5 71 0.0024 27.7 6.9 53 115-173 75-130 (282)
233 3shr_A CGMP-dependent protein 39.9 36 0.0012 28.2 4.9 52 100-152 180-233 (299)
234 2qcs_B CAMP-dependent protein 38.2 74 0.0025 26.0 6.6 48 100-152 62-109 (291)
235 3ukn_A Novel protein similar t 37.6 45 0.0015 26.1 5.0 49 100-153 98-146 (212)
236 1pcq_O Groes protein; chaperon 37.2 62 0.0021 23.5 5.2 49 107-158 22-71 (97)
237 4ask_A Lysine-specific demethy 35.7 33 0.0011 32.3 4.3 29 143-171 314-342 (510)
238 3avr_A Lysine-specific demethy 34.7 50 0.0017 31.2 5.4 32 142-173 338-369 (531)
239 3g7d_A PHPD; non heme Fe(II) d 34.4 1.4E+02 0.0049 26.8 7.9 74 143-218 156-265 (443)
240 2qdr_A Uncharacterized protein 34.1 81 0.0028 27.3 6.1 65 97-179 216-288 (303)
241 3of1_A CAMP-dependent protein 32.2 47 0.0016 26.2 4.3 49 100-152 148-196 (246)
242 3of1_A CAMP-dependent protein 32.0 53 0.0018 25.9 4.6 47 101-152 31-77 (246)
243 1wgp_A Probable cyclic nucleot 30.7 9.8 0.00033 27.5 -0.2 49 102-152 31-82 (137)
244 4din_B CAMP-dependent protein 29.6 51 0.0017 28.9 4.4 50 102-152 273-324 (381)
245 1yll_A PA5104, conserved hypot 29.1 99 0.0034 25.2 5.7 34 120-157 141-174 (200)
246 3shr_A CGMP-dependent protein 27.7 1.1E+02 0.0037 25.1 6.0 49 100-153 62-110 (299)
247 1eyb_A Homogentisate 1,2-dioxy 27.0 64 0.0022 30.0 4.6 51 102-161 347-398 (471)
248 2oz6_A Virulence factor regula 26.0 40 0.0014 25.9 2.7 29 196-231 175-206 (207)
249 1tc3_C Protein (TC3 transposas 24.8 89 0.003 17.7 3.7 26 196-221 21-46 (51)
250 3ryp_A Catabolite gene activat 24.6 45 0.0015 25.7 2.8 28 196-230 178-208 (210)
251 2gau_A Transcriptional regulat 24.3 50 0.0017 26.0 3.1 29 196-231 191-222 (232)
252 3e97_A Transcriptional regulat 23.8 51 0.0017 26.0 3.0 29 196-231 186-217 (231)
253 3la7_A Global nitrogen regulat 23.4 50 0.0017 26.5 2.9 31 196-233 204-237 (243)
254 3iwz_A CAP-like, catabolite ac 23.2 49 0.0017 25.9 2.8 29 196-231 198-229 (230)
255 2bgc_A PRFA; bacterial infecti 23.0 43 0.0015 26.7 2.4 29 196-231 180-212 (238)
256 2dkz_A Hypothetical protein LO 23.0 51 0.0018 23.4 2.4 32 186-220 45-76 (84)
257 3d0s_A Transcriptional regulat 22.7 53 0.0018 25.8 2.9 29 196-231 188-219 (227)
258 2zcw_A TTHA1359, transcription 22.6 52 0.0018 25.4 2.8 29 196-231 157-188 (202)
259 4ev0_A Transcription regulator 22.6 51 0.0017 25.5 2.7 8 197-204 175-182 (216)
260 3tnp_B CAMP-dependent protein 22.4 72 0.0025 28.4 4.0 52 100-152 290-348 (416)
261 3b02_A Transcriptional regulat 22.1 45 0.0015 25.7 2.3 29 196-231 150-181 (195)
262 3e6c_C CPRK, cyclic nucleotide 21.7 61 0.0021 26.0 3.1 28 196-230 188-218 (250)
263 1ft9_A Carbon monoxide oxidati 21.3 47 0.0016 26.1 2.3 10 196-205 174-183 (222)
264 1we3_O CPN10(groes); chaperoni 20.7 1.4E+02 0.0049 21.6 4.6 55 107-164 27-82 (100)
265 3dkw_A DNR protein; CRP-FNR, H 20.7 47 0.0016 25.9 2.2 30 196-232 189-221 (227)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=7.3e-48 Score=326.91 Aligned_cols=193 Identities=45% Similarity=0.776 Sum_probs=182.6
Q ss_pred cCCCCCCceeeccCCCc-cccCCccCCCCCCCCCCCeee-e-cCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEE
Q 045405 29 SDPDPLQDVCIADLNAT-ISINGFPCKPASNVTSDDFFT-D-FSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDL 105 (240)
Q Consensus 29 ~d~~~~~dfcva~~~~~-~~~~g~~ck~~~~v~~~df~f-~-l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l 105 (240)
+||||||||||||++++ +++||+||| |+.++++||+| + +.+++++.+..|+.++.++..++|+++++++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 59999999999999988 999999999 99999999999 5 88888888899999999999999999999999999999
Q ss_pred cCCcccCCccCCCCCeEEEEeeCEEEEEEEccC---CeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCC
Q 045405 106 DVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPG 182 (240)
Q Consensus 106 ~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~---g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg 182 (240)
+||+..+||||++++|++||++|++++++.+.+ ++++++.|++||++++|+|..|++.|.|++++++++++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 999999999999989999999999999998765 67778899999999999999999999999999999999999999
Q ss_pred ceeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCC
Q 045405 183 VSDSIGTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQ 222 (240)
Q Consensus 183 ~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~ 222 (240)
.+.++.++|+++|.+++++|+++|+++++++++|++++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~ 199 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAG 199 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTT
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcC
Confidence 9999999999877799999999999999999999998854
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=1.1e-32 Score=259.42 Aligned_cols=162 Identities=12% Similarity=0.238 Sum_probs=146.5
Q ss_pred eeecC--CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eE
Q 045405 65 FTDFS--KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TF 141 (240)
Q Consensus 65 ~f~l~--~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~ 141 (240)
.|++. +.++..+..||+++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|++++++++++| ++
T Consensus 288 ~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~ 367 (466)
T 3kgl_A 288 TDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRV 367 (466)
T ss_dssp EEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEE
T ss_pred cccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEE
Confidence 44444 3345567889999999999999999999999999999999999999999999999999999999999875 67
Q ss_pred EEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 045405 142 FSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSI--GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAA 219 (240)
Q Consensus 142 ~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~--~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~ 219 (240)
+..+|++|||++||+|++|++ |.|++++++++++++++|+...++ .++|+ .+|++||+++|+++.+++++|+++
T Consensus 368 f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~---~lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 368 FDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLR---GLPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp EEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGG---GSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhh---hCCHHHHHHHhCcCHHHHHHHHhc
Confidence 899999999999999999998 779999999999999999999887 57998 699999999999999999999999
Q ss_pred cCCCceEEecC
Q 045405 220 RAQSSWINILD 230 (240)
Q Consensus 220 ~~~~~~i~~~~ 230 (240)
+....++...+
T Consensus 444 q~e~~i~~~~~ 454 (466)
T 3kgl_A 444 TIETTLTHSSG 454 (466)
T ss_dssp CCCSSEEECC-
T ss_pred cCccEEECCCc
Confidence 88777776653
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.97 E-value=2.5e-31 Score=251.93 Aligned_cols=159 Identities=11% Similarity=0.223 Sum_probs=143.0
Q ss_pred eeeecC--CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-e
Q 045405 64 FFTDFS--KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-T 140 (240)
Q Consensus 64 f~f~l~--~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~ 140 (240)
+.+++. ..++..+..||+++.+++.+||+|+++||++++++|.|||+++|||||+|+||+||++|++++++++++| +
T Consensus 322 l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~ 401 (496)
T 3ksc_A 322 LRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNT 401 (496)
T ss_dssp CEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCE
T ss_pred hhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcE
Confidence 455555 3356668889999999999999999999999999999999999999999999999999999999999875 6
Q ss_pred EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 045405 141 FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSI--GTLFDTTPPVPNEVLTKSFRVGDDVINTIRA 218 (240)
Q Consensus 141 ~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~--~~lf~s~~~~p~~vla~af~v~~~~v~~l~~ 218 (240)
++..+|++|||++||+|++|++.| +++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|++
T Consensus 402 ~f~~~l~~GDV~v~P~G~~H~~~a-~~e~~~~l~f~~s~np~~~~LaG~~sv~~---~~p~eVLa~aF~v~~~~v~~Lk~ 477 (496)
T 3ksc_A 402 VFDGELEAGRALTVPQNYAVAAKS-LSDRFSYVAFKTNDRAGIARLAGTSSVIN---NLPLDVVAATFNLQRNEARQLKS 477 (496)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSTTCCEEESSSTTCTTT---TSCHHHHHHHHTCCHHHHHHHHH
T ss_pred EEEEEecCCeEEEECCCCEEEEEe-CCCCEEEEEEECCCCCccccccchhhhhh---hCCHHHHHHHHCcCHHHHHHHHh
Confidence 778899999999999999999877 4788999999999999998886 67998 79999999999999999999999
Q ss_pred hcCCCceE
Q 045405 219 ARAQSSWI 226 (240)
Q Consensus 219 ~~~~~~~i 226 (240)
.+....++
T Consensus 478 ~q~e~~i~ 485 (496)
T 3ksc_A 478 NNPFKFLV 485 (496)
T ss_dssp SCCCSSEE
T ss_pred cCCccEEe
Confidence 87665544
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.97 E-value=8e-32 Score=253.54 Aligned_cols=155 Identities=11% Similarity=0.221 Sum_probs=143.1
Q ss_pred CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEEEEEECC
Q 045405 70 KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFFSKVLTP 148 (240)
Q Consensus 70 ~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~~~~l~~ 148 (240)
+.+++.++.|++++.+++.+||+|+++||++++++|.|||+++|||||+|+||+||++|++++++++++| +++..+|++
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~ 374 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSR 374 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecC
Confidence 4566778899999999999999999999999999999999999999999999999999999999999875 688899999
Q ss_pred CCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCCceE
Q 045405 149 GKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSI--GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQSSWI 226 (240)
Q Consensus 149 GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~--~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~~~i 226 (240)
|||++||+|++|++. .|++++++++++++++|+...++ .++|+ .+|++||+++|+++.+++++|++++....++
T Consensus 375 GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~---~ip~eVla~aF~v~~e~v~~Lk~~~~e~~i~ 450 (465)
T 3qac_A 375 GQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIR---SLPIDVVSNIYQISREEAFGLKFNRPETTLF 450 (465)
T ss_dssp TCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHH---HSCHHHHHHHHTCCHHHHHHHHHSCCSCSEE
T ss_pred CeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhh---hCCHHHHHHHhCCCHHHHHHHHhccCccEEE
Confidence 999999999999986 57889999999999999999887 68998 6999999999999999999999998777666
Q ss_pred Ee
Q 045405 227 NI 228 (240)
Q Consensus 227 ~~ 228 (240)
..
T Consensus 451 ~~ 452 (465)
T 3qac_A 451 RS 452 (465)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=5.9e-31 Score=248.05 Aligned_cols=155 Identities=15% Similarity=0.219 Sum_probs=142.0
Q ss_pred CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEEEEEECC
Q 045405 70 KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFFSKVLTP 148 (240)
Q Consensus 70 ~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~~~~l~~ 148 (240)
..+++.+..||+++.+++.+||+|+++++++++++|.||++.+|||||+|+|++||++|++++++++++| +++..+|++
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~ 373 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVRE 373 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeC
Confidence 4556668899999999999999999999999999999999999999999999999999999999999875 667788999
Q ss_pred CCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCCceE
Q 045405 149 GKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSI--GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQSSWI 226 (240)
Q Consensus 149 GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~--~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~~~i 226 (240)
||+++||+|++|++.| |++++.+++++++++|+...++ .++|+ .+|++||+++|+++++++++|++.+....++
T Consensus 374 GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~---~~p~~Vla~af~v~~~~v~~l~~~~~e~~i~ 449 (459)
T 2e9q_A 374 GQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMR---MLPLGVLSNMYRISREEAQRLKYGQQEMRVL 449 (459)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHH---HSCHHHHHHHHTCCHHHHHHHHHSCCSCSEE
T ss_pred CcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHH---hCCHHHHHHHHCcCHHHHHHHHhcCCccEEe
Confidence 9999999999999999 7888999999999999999987 78998 6999999999999999999999987655544
Q ss_pred Ee
Q 045405 227 NI 228 (240)
Q Consensus 227 ~~ 228 (240)
..
T Consensus 450 ~~ 451 (459)
T 2e9q_A 450 SP 451 (459)
T ss_dssp CS
T ss_pred CC
Confidence 33
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=1.1e-30 Score=247.91 Aligned_cols=161 Identities=16% Similarity=0.279 Sum_probs=143.0
Q ss_pred eeeecC--CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-e
Q 045405 64 FFTDFS--KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-T 140 (240)
Q Consensus 64 f~f~l~--~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~ 140 (240)
+.|++. ..+++.++.|++++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|++++++++++| +
T Consensus 358 l~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~ 437 (531)
T 3fz3_A 358 LKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDA 437 (531)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred eeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcE
Confidence 456555 3456778899999999999999999999999999999999999999999999999999999999999875 6
Q ss_pred EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 045405 141 FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSI--GTLFDTTPPVPNEVLTKSFRVGDDVINTIRA 218 (240)
Q Consensus 141 ~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~--~~lf~s~~~~p~~vla~af~v~~~~v~~l~~ 218 (240)
+++.+|++||+++||+|++|+.. .|++.+.++++.++++|++..++ .++|+ .+|++||+++|+++.+++++|++
T Consensus 438 v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~---~lP~eVLa~aF~v~~e~v~kLk~ 513 (531)
T 3fz3_A 438 ILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLR---ALPDEVLANAYQISREQARQLKY 513 (531)
T ss_dssp EEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHH---HSCHHHHHHHHTCCHHHHHHHHH
T ss_pred EEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHH---hCCHHHHHHHhCcCHHHHHHHHh
Confidence 78999999999999999999876 46677777765566899998887 78998 69999999999999999999999
Q ss_pred hcCCCceEEe
Q 045405 219 ARAQSSWINI 228 (240)
Q Consensus 219 ~~~~~~~i~~ 228 (240)
+.....++.+
T Consensus 514 ~~~es~i~~p 523 (531)
T 3fz3_A 514 NRQETIALSS 523 (531)
T ss_dssp SCCCSSEECC
T ss_pred cCCCceEECC
Confidence 9887776654
No 7
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.97 E-value=5.8e-30 Score=240.64 Aligned_cols=164 Identities=14% Similarity=0.162 Sum_probs=141.4
Q ss_pred CCCeeeecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-
Q 045405 61 SDDFFTDFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN- 139 (240)
Q Consensus 61 ~~df~f~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g- 139 (240)
...+.|.|....+..+..||+++.+++.+||+|+++|+++++++|.||++++|||||+|+|++||++|+++++++++++
T Consensus 244 ~~~~~~~l~~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~ 323 (445)
T 2cav_A 244 SQDKPFNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 323 (445)
T ss_dssp --CCCEETTSSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC---
T ss_pred CcccceeccccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCc
Confidence 3467787655544446777899999999999999999999999999999999999999999999999999999999864
Q ss_pred --------e--EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE-eCCCCCceecc---chhhcCCCCCCHHHHHhh
Q 045405 140 --------T--FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF-NTQNPGVSDSI---GTLFDTTPPVPNEVLTKS 205 (240)
Q Consensus 140 --------~--~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~-~s~~Pg~~~~~---~~lf~s~~~~p~~vla~a 205 (240)
+ +++.+|++|||++||+|++|++.|. +++.++++. ++++|+.+.++ .++|+ .+|++||+++
T Consensus 324 ~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~---~~p~~vla~a 398 (445)
T 2cav_A 324 QQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDLT 398 (445)
T ss_dssp --------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGG---GSCHHHHHHH
T ss_pred ccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhh---hCCHHHHHHH
Confidence 3 6899999999999999999999997 467887766 45689988887 78998 6999999999
Q ss_pred cCCCHHHHHHHHhhcCCCceEEec
Q 045405 206 FRVGDDVINTIRAARAQSSWINIL 229 (240)
Q Consensus 206 f~v~~~~v~~l~~~~~~~~~i~~~ 229 (240)
|+++.+++++|++.+....++..-
T Consensus 399 f~v~~~~v~~l~~~~~e~~~~~~~ 422 (445)
T 2cav_A 399 FPGSGEEVEELLENQKESYFVDGQ 422 (445)
T ss_dssp SSSCHHHHHHHHHHCCSCSEEECC
T ss_pred HCcCHHHHHHHHhcCCccEEeCCc
Confidence 999999999999998777666553
No 8
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.97 E-value=8.3e-30 Score=237.89 Aligned_cols=165 Identities=13% Similarity=0.150 Sum_probs=143.2
Q ss_pred CCCeeeecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-
Q 045405 61 SDDFFTDFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN- 139 (240)
Q Consensus 61 ~~df~f~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g- 139 (240)
...+.|.|....+..+..+|+++.+++.+||+|+++++++++++|.||++.+||||++|+|++||++|++++++++++|
T Consensus 212 ~~~~~~~l~~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~ 291 (416)
T 1uij_A 212 SEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQ 291 (416)
T ss_dssp CSSSCEETTSSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC--
T ss_pred CcccceeccccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCc
Confidence 4567787655544335556689999999999999999999999999999999999999999999999999999999876
Q ss_pred -------------eEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeC-CCCCceecc---chhhcCCCCCCHHHH
Q 045405 140 -------------TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNT-QNPGVSDSI---GTLFDTTPPVPNEVL 202 (240)
Q Consensus 140 -------------~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s-~~Pg~~~~~---~~lf~s~~~~p~~vl 202 (240)
+++..+|++||+++||+|++|++.|. +++.+++++++ ++|+.+.++ .++|+ .+|++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~---~~p~~vl 366 (416)
T 1uij_A 292 QQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVR---QIERQVQ 366 (416)
T ss_dssp ----------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGG---GSCHHHH
T ss_pred cccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHH---hCCHHHH
Confidence 47778999999999999999999998 57999998865 599998886 68998 6999999
Q ss_pred HhhcCCCHHHHHHHHhhcCCCceEEecC
Q 045405 203 TKSFRVGDDVINTIRAARAQSSWINILD 230 (240)
Q Consensus 203 a~af~v~~~~v~~l~~~~~~~~~i~~~~ 230 (240)
+++|+++++++++|++.+....++....
T Consensus 367 a~af~~~~~~v~~l~~~~~~~~~~~~~~ 394 (416)
T 1uij_A 367 ELAFPGSAQDVERLLKKQRESYFVDAQP 394 (416)
T ss_dssp HHHSSSCHHHHHHHTTSCCSCSEEEC--
T ss_pred HHHHCcCHHHHHHHHhcCCccEEECCcc
Confidence 9999999999999999887666665543
No 9
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.96 E-value=2.6e-29 Score=235.63 Aligned_cols=167 Identities=16% Similarity=0.192 Sum_probs=144.9
Q ss_pred CCCCCeeeecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccC
Q 045405 59 VTSDDFFTDFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTN 138 (240)
Q Consensus 59 v~~~df~f~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~ 138 (240)
.....+.|.|....+..+..|++++.+++.++|+|+++|+++++++|.||++.+|||||+|+|++||++|++++++++++
T Consensus 227 ~~~~~~~~~l~~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~ 306 (434)
T 2ea7_A 227 LSSQDEPFNLRNSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLS 306 (434)
T ss_dssp TTCSSSCEETTSSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEE
T ss_pred CCCcccceeeccCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecC
Confidence 33456778766654444677789999999999999999999999999999999999999999999999999999999885
Q ss_pred C-------------eEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEe-CCCCCceecc---chhhcCCCCCCHHH
Q 045405 139 N-------------TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFN-TQNPGVSDSI---GTLFDTTPPVPNEV 201 (240)
Q Consensus 139 g-------------~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~-s~~Pg~~~~~---~~lf~s~~~~p~~v 201 (240)
| +++..+|++||+++||+|++|++.|. +++.++++++ +++|+.+.++ .++|+ .+|++|
T Consensus 307 g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~---~~p~~v 381 (434)
T 2ea7_A 307 DQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMS---EIPTEV 381 (434)
T ss_dssp ECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGG---GSCHHH
T ss_pred ccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhh---hCCHHH
Confidence 4 36778999999999999999999998 5788888775 4588988887 68998 699999
Q ss_pred HHhhcCCCHHHHHHHHhhcCCCceEEecC
Q 045405 202 LTKSFRVGDDVINTIRAARAQSSWINILD 230 (240)
Q Consensus 202 la~af~v~~~~v~~l~~~~~~~~~i~~~~ 230 (240)
|+++|+++.+++++|++.+....++....
T Consensus 382 la~af~v~~~~v~~l~~~~~e~~~~~~~~ 410 (434)
T 2ea7_A 382 LEVSFPASGKKVEKLIKKQSESHFVDAQP 410 (434)
T ss_dssp HHHHSSSCHHHHHHHHTTCCSCSEEECCC
T ss_pred HHHHHCcCHHHHHHHHhcCCccEEECCCc
Confidence 99999999999999999887666666543
No 10
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.96 E-value=6.1e-29 Score=235.34 Aligned_cols=157 Identities=17% Similarity=0.295 Sum_probs=142.8
Q ss_pred CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEEEEEECC
Q 045405 70 KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFFSKVLTP 148 (240)
Q Consensus 70 ~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~~~~l~~ 148 (240)
..+++.+..|++++.++..++|+|+++++++++++|.||++.+|||||+++|++||++|++++++++++| +++..+|++
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~ 389 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQE 389 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcC
Confidence 4456668999999999999999999999999999999999999999999999999999999999998765 567788999
Q ss_pred CCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCCceE
Q 045405 149 GKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSI--GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQSSWI 226 (240)
Q Consensus 149 GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~--~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~~~i 226 (240)
||+++||+|++|++.| |++++.+++++++++|+...++ .++|+ .+|++||+++|+++++++++|++.+....++
T Consensus 390 GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~---~~p~~Vla~af~~~~~~v~~l~~~~~e~~i~ 465 (476)
T 1fxz_A 390 GRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLN---ALPEEVIQHTFNLKSQQARQIKNNNPFKFLV 465 (476)
T ss_dssp TCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGG---GSCHHHHHHHHTCCHHHHHHHHHSCCCSSEE
T ss_pred CCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHH---hCCHHHHHHHhCcCHHHHHHHHhhCCCcEEe
Confidence 9999999999999999 8889999998888999998887 78999 6999999999999999999999988766655
Q ss_pred EecC
Q 045405 227 NILD 230 (240)
Q Consensus 227 ~~~~ 230 (240)
....
T Consensus 466 ~p~~ 469 (476)
T 1fxz_A 466 PPQE 469 (476)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 5533
No 11
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=5e-29 Score=236.99 Aligned_cols=155 Identities=13% Similarity=0.274 Sum_probs=141.8
Q ss_pred CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEEEEEECC
Q 045405 70 KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFFSKVLTP 148 (240)
Q Consensus 70 ~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~~~~l~~ 148 (240)
+.+++.+..|++++.++..+||+|+++++++++++|.||++.+||||++++|++||++|++++++++++| +++..+|++
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~ 423 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQE 423 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcC
Confidence 4466778999999999999999999999999999999999999999999999999999999999998875 667788999
Q ss_pred CCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceecc--chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCCceE
Q 045405 149 GKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSI--GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQSSWI 226 (240)
Q Consensus 149 GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~--~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~~~i 226 (240)
||+++||+|++|++.| |++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|++.+....++
T Consensus 424 GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~---~lp~eVla~aF~v~~e~v~~L~~~~~e~~i~ 499 (510)
T 3c3v_A 424 GHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVID---NLPEEVVANSYGLPREQARQLKNNNPFKFFV 499 (510)
T ss_dssp TCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTT---TSCHHHHHHHHTCCHHHHHHHHHSCCCSSEE
T ss_pred CcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHH---hCCHHHHHHHHCcCHHHHHHHHhhCCCcEEE
Confidence 9999999999999999 8888898888888899999887 78999 6999999999999999999999988765555
Q ss_pred Ee
Q 045405 227 NI 228 (240)
Q Consensus 227 ~~ 228 (240)
..
T Consensus 500 ~p 501 (510)
T 3c3v_A 500 PP 501 (510)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 12
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.96 E-value=3.6e-29 Score=233.43 Aligned_cols=159 Identities=14% Similarity=0.173 Sum_probs=137.6
Q ss_pred CCeeeecCC-CCCccCcCCceEEEecccCC-CCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC
Q 045405 62 DDFFTDFSK-DPTTFDVFKRAVTFGDVFGF-PAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN 139 (240)
Q Consensus 62 ~df~f~l~~-~~~~~~~~G~~v~~~~~~~~-P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g 139 (240)
..++|+|.. .|.+ +..+|+++.+++.++ |+|+++|+++++++|.|||+.+|||||+|+|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~-~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDL-SNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSE-EETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCce-eCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 367886554 4445 455667899999999 9999999999999999999999999999999999999999999998865
Q ss_pred -------------------------eEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE-eCCCCCceeccc---hh
Q 045405 140 -------------------------TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF-NTQNPGVSDSIG---TL 190 (240)
Q Consensus 140 -------------------------~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~-~s~~Pg~~~~~~---~l 190 (240)
+++..+|++|||++||+|++||+.|.+ +++++++. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 567899999999999999999999864 47777754 456899998874 68
Q ss_pred hcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCCceE
Q 045405 191 FDTTPPVPNEVLTKSFRVGDDVINTIRAARAQSSWI 226 (240)
Q Consensus 191 f~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~~~i 226 (240)
|+ ++|++||++||+++.+++++|++.+.....+
T Consensus 383 ~~---~~~~evla~af~v~~~~v~~L~~~q~e~~~~ 415 (418)
T 3s7i_A 383 ID---QIEKQAKDLAFPGSGEQVEKLIKNQKESHFV 415 (418)
T ss_dssp HH---HSCHHHHHHHSSSCHHHHHHHHHTCCSCSEE
T ss_pred hh---cCCHHHHHHHhCCCHHHHHHHHhcCCcceee
Confidence 88 7999999999999999999999988766544
No 13
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.96 E-value=1.8e-28 Score=204.29 Aligned_cols=160 Identities=13% Similarity=0.170 Sum_probs=132.3
Q ss_pred CCeeeecCCCCCccCcCCceEEEecc-----cCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEc
Q 045405 62 DDFFTDFSKDPTTFDVFKRAVTFGDV-----FGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVT 136 (240)
Q Consensus 62 ~df~f~l~~~~~~~~~~G~~v~~~~~-----~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~ 136 (240)
+.|+|.+.+..+..+..||+++.++. ..+|+++ ++++++++++||+..+|| |++++|++||++|++++++++
T Consensus 2 ~p~~f~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 2 NPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp CTTEECGGGEEEEEEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCceechhhcccceEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 34778666554444778999999877 6688877 699999999999999999 889999999999999999998
Q ss_pred cCCeEEEEEECCCCEEEeCCCCeEEEEecCCC-CEEEEEEE-eCCCCCceec---c-----chhhcCCCCCCHHHHHhhc
Q 045405 137 TNNTFFSKVLTPGKVFLIPRALVHFQLNVGNE-PATFIPIF-NTQNPGVSDS---I-----GTLFDTTPPVPNEVLTKSF 206 (240)
Q Consensus 137 ~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~-~a~~i~~~-~s~~Pg~~~~---~-----~~lf~s~~~~p~~vla~af 206 (240)
++|. ..++|++||++++|+|.+|+++|.|++ ++++++++ ++++||.+.. + .++|+ ++|++||+++|
T Consensus 79 ~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~---~~p~~vla~af 154 (178)
T 1dgw_A 79 PDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLEASY 154 (178)
T ss_dssp TTEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHHHHH
T ss_pred CCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh---hCCHHHHHHHH
Confidence 7653 378999999999999999999999986 78888775 4567874432 2 57998 79999999999
Q ss_pred CCCHHHHHHHHh-hcCCCceEEe
Q 045405 207 RVGDDVINTIRA-ARAQSSWINI 228 (240)
Q Consensus 207 ~v~~~~v~~l~~-~~~~~~~i~~ 228 (240)
+++++++++|+. ++....+|++
T Consensus 155 ~v~~~~~~~l~~~~~~~~~iv~~ 177 (178)
T 1dgw_A 155 DSPYDEIEQTLLQEEQEGVIVKM 177 (178)
T ss_dssp TSCHHHHHHHTTSCCSSSSEEEC
T ss_pred CcCHHHHHHHhcCcCcCceEEEc
Confidence 999999999994 4445556654
No 14
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.96 E-value=1.2e-28 Score=233.99 Aligned_cols=158 Identities=18% Similarity=0.334 Sum_probs=141.8
Q ss_pred eeeecC--CCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-e
Q 045405 64 FFTDFS--KDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-T 140 (240)
Q Consensus 64 f~f~l~--~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~ 140 (240)
+.+++. +++++.+..|++++.++..++|+|+++++++++++|.||++.+||||++++|++||++|++++++++++| +
T Consensus 331 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~ 410 (493)
T 2d5f_A 331 LHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNA 410 (493)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred eeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCE
Confidence 334444 4567778999999999999999999999999999999999999999999999999999999999998864 5
Q ss_pred EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhc
Q 045405 141 FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTLFDTTPPVPNEVLTKSFRVGDDVINTIRAAR 220 (240)
Q Consensus 141 ~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~ 220 (240)
++..+|++||+++||+|.+|++.| +++++.+++++++++|+...+ .++|+ .+|++||+++|+++.+++++|++.+
T Consensus 411 ~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~---~~p~eVla~aF~v~~~~v~~l~~~~ 485 (493)
T 2d5f_A 411 VFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFR---AIPSEVLSNSYNLGQSQVRQLKYQG 485 (493)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHH---HSCHHHHHHHHTCCHHHHHHHHHSS
T ss_pred EEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHH---hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 667889999999999999999998 558899999999999999998 78999 6999999999999999999999987
Q ss_pred CCCceE
Q 045405 221 AQSSWI 226 (240)
Q Consensus 221 ~~~~~i 226 (240)
....++
T Consensus 486 ~e~~i~ 491 (493)
T 2d5f_A 486 NSGPLV 491 (493)
T ss_dssp CSSSEE
T ss_pred CCceec
Confidence 655543
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.94 E-value=2.3e-26 Score=213.28 Aligned_cols=152 Identities=18% Similarity=0.185 Sum_probs=127.6
Q ss_pred eecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEcc------CC
Q 045405 66 TDFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTT------NN 139 (240)
Q Consensus 66 f~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~------~g 139 (240)
+++.+..+..+..+|+++.+++.+ +++++++++|.||++.+||||++|+|+.||++|+++++++++ ++
T Consensus 213 ~~l~~~~p~~~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g 286 (397)
T 2phl_A 213 KSLSKQDNTIGNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLE 286 (397)
T ss_dssp -------CEEEETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSC
T ss_pred ccccccCCcccCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCC
Confidence 355554444456667799999887 789999999999999999999999999999999999999998 44
Q ss_pred -eEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEe-CCCCCceecc---chhhcCCCCCC-----HHHHHhhcCCC
Q 045405 140 -TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFN-TQNPGVSDSI---GTLFDTTPPVP-----NEVLTKSFRVG 209 (240)
Q Consensus 140 -~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~-s~~Pg~~~~~---~~lf~s~~~~p-----~~vla~af~v~ 209 (240)
++++.+|++||+++||+|++|+++|.+ ++.++++.+ +++|+.+.++ .++|+ .+| ++||+++|+++
T Consensus 287 ~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~---~~p~~~~~~eVla~af~v~ 361 (397)
T 2phl_A 287 YESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVIS---SIGRALDGKDVLGLTFSGS 361 (397)
T ss_dssp EEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHH---HHHTSTTHHHHHHHHSSSC
T ss_pred ceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHh---hCCCccchHHHHHHHhCcC
Confidence 788999999999999999999999986 788888765 4589988877 78998 477 99999999999
Q ss_pred HHHHHHHHhhcCCCceEEe
Q 045405 210 DDVINTIRAARAQSSWINI 228 (240)
Q Consensus 210 ~~~v~~l~~~~~~~~~i~~ 228 (240)
++++++|++.+....++..
T Consensus 362 ~~~v~~l~~~~~e~~i~~~ 380 (397)
T 2phl_A 362 GDEVMKLINKQSGSYFVDA 380 (397)
T ss_dssp HHHHHHHHTTCCCCSEEEC
T ss_pred HHHHHHHHhcCCccEEeCC
Confidence 9999999998866655554
No 16
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.94 E-value=3.3e-26 Score=215.71 Aligned_cols=151 Identities=14% Similarity=0.256 Sum_probs=128.4
Q ss_pred CcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EE------------
Q 045405 76 DVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FF------------ 142 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~------------ 142 (240)
...+|.+.. ...+.|.|+++|++++|++|+|||+++||||+ ++|++||++|++++++++++++ .|
T Consensus 42 ~se~G~~~~-~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~ 119 (459)
T 2e9q_A 42 EAEAGFTEV-WDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGS 119 (459)
T ss_dssp EETTEEEEE-CCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------
T ss_pred ecCCcEEEe-cCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhcccccc
Confidence 566775555 55677999999999999999999999999995 8999999999999999988653 22
Q ss_pred --------EEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCC--------CCceecc-------------------
Q 045405 143 --------SKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQN--------PGVSDSI------------------- 187 (240)
Q Consensus 143 --------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~--------Pg~~~~~------------------- 187 (240)
.++|++||+++||+|++||++|.|++++++++++++.| +..+.++
T Consensus 120 ~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 199 (459)
T 2e9q_A 120 AFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRK 199 (459)
T ss_dssp CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC-------
T ss_pred ccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccc
Confidence 46899999999999999999999999999999998654 3333333
Q ss_pred -------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCC-ceEEecCC
Q 045405 188 -------GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQS-SWINILDG 231 (240)
Q Consensus 188 -------~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~-~~i~~~~~ 231 (240)
.++|+ +|++++|++||+++.+++++|++.+..+ .||++.++
T Consensus 200 ~~~~~~~~nif~---gf~~evLa~aF~v~~~~v~kL~~~~~~~G~Iv~~~~~ 248 (459)
T 2e9q_A 200 GSSGEKSGNIFS---GFADEFLEEAFQIDGGLVRKLKGEDDERDRIVQVDED 248 (459)
T ss_dssp -----CCCCTTT---TSCHHHHHHHHTCCHHHHHHHHTTTCCSTTEEECCSS
T ss_pred ccccccccchhh---cCCHHHHHhhcCCCHHHHHhhhhcccCCccEEEeCCc
Confidence 37998 7999999999999999999999988755 57877644
No 17
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.93 E-value=5.8e-26 Score=213.75 Aligned_cols=151 Identities=18% Similarity=0.350 Sum_probs=129.2
Q ss_pred CcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEE------------
Q 045405 76 DVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFF------------ 142 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~------------ 142 (240)
...||.+..++.. .+.|+|+|++++|++|+|||+.+|||| +++|++||++|+++++++.+++ +.|
T Consensus 29 ~se~G~~e~~d~~-~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~ 106 (465)
T 3qac_A 29 QAERGLTEVWDSN-EQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGED 106 (465)
T ss_dssp EETTEEEEECCTT-SHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC------------
T ss_pred eCCCcEEEEECCC-ChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccc
Confidence 5678888888754 478999999999999999999999999 8999999999999999998753 222
Q ss_pred ------------------------EEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCC---------Cceecc--
Q 045405 143 ------------------------SKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNP---------GVSDSI-- 187 (240)
Q Consensus 143 ------------------------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~P---------g~~~~~-- 187 (240)
.+.+++||++++|+|++||++|+|++++++++++++.|+ ..+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~ 186 (465)
T 3qac_A 107 ERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGK 186 (465)
T ss_dssp ------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSC
T ss_pred cccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCC
Confidence 358999999999999999999999999999999987543 334443
Q ss_pred ----------------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCC-ceEEecCC
Q 045405 188 ----------------------GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQS-SWINILDG 231 (240)
Q Consensus 188 ----------------------~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~-~~i~~~~~ 231 (240)
.++|+ +|++++|++||+++.+++++|++.+..+ .+|++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~e~La~Af~v~~~~~~kl~~~q~~rG~Ivrv~~~ 250 (465)
T 3qac_A 187 PQQEHSGEHQFSRESRRGERNTGNIFR---GFETRLLAESFGVSEEIAQKLQAEQDDRGNIVRVQEG 250 (465)
T ss_dssp CCCSCC--------------CCCCGGG---GSCHHHHHHHHTCCHHHHHHHHTTTCCSCSEEEC-CC
T ss_pred Cccccccccccccccccccccccchhh---cCCHHHHHHHhCCCHHHHHHhhhccccceeEEEecCc
Confidence 37999 8999999999999999999999888755 48887654
No 18
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.93 E-value=1e-25 Score=213.56 Aligned_cols=154 Identities=15% Similarity=0.250 Sum_probs=129.3
Q ss_pred CcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEE------------
Q 045405 76 DVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFF------------ 142 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~------------ 142 (240)
...||. +.+...+.|+|+++|++++|++|+|||+++|||| +|+|++||++|++.++++.+++ +.|
T Consensus 25 ~se~G~-~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~ 102 (496)
T 3ksc_A 25 ESEGGL-IETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGR 102 (496)
T ss_dssp EETTEE-EEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC-------------
T ss_pred CCCCcE-EEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhccccccc
Confidence 456674 5555688999999999999999999999999999 8999999999999999998863 333
Q ss_pred --------EEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCC--------ceecc-------------------
Q 045405 143 --------SKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPG--------VSDSI------------------- 187 (240)
Q Consensus 143 --------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg--------~~~~~------------------- 187 (240)
.++|++||||+||+|++||++|.|+++++++++++..++. .+.++
T Consensus 103 ~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~ 182 (496)
T 3ksc_A 103 RYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQE 182 (496)
T ss_dssp --CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-------
T ss_pred ccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccc
Confidence 3599999999999999999999999999999999765532 22221
Q ss_pred -----chhhcCCCCCCHHHHHhhcCCCHHHHHHHH--hh-cCCCceEEecCCeee
Q 045405 188 -----GTLFDTTPPVPNEVLTKSFRVGDDVINTIR--AA-RAQSSWINILDGRSI 234 (240)
Q Consensus 188 -----~~lf~s~~~~p~~vla~af~v~~~~v~~l~--~~-~~~~~~i~~~~~~~~ 234 (240)
.++|+ +|+.++|+.||+++.++++||+ .. .....||++.++.++
T Consensus 183 ~~~~~~ni~s---gF~~e~La~Af~v~~e~~~kl~~~~~~~~rg~IV~v~~~l~~ 234 (496)
T 3ksc_A 183 QENEGNNIFS---GFKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKVKGGLSI 234 (496)
T ss_dssp ----CCSGGG---GSCHHHHHHHHTCCHHHHHHHTTTTCCTTTCSEEECSSCCCC
T ss_pred ccccCCCchh---hcCHHHHHHHHCCCHHHHHHHHhhcccccCccEEEecCcccc
Confidence 47999 8999999999999999999999 33 345669999876553
No 19
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.93 E-value=8.6e-26 Score=213.79 Aligned_cols=152 Identities=14% Similarity=0.231 Sum_probs=127.5
Q ss_pred CcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeE--------------
Q 045405 76 DVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTF-------------- 141 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~-------------- 141 (240)
...+|.+.. .....|.|+++|++++|++|+|||+.+||||+ ++|++||++|++++++++++++.
T Consensus 27 ~se~G~~e~-~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~ 104 (476)
T 1fxz_A 27 ESEGGLIET-WNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQS 104 (476)
T ss_dssp EETTEEEEE-CCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC-------------
T ss_pred ecCCceEEe-eCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccc
Confidence 567775555 44566999999999999999999999999996 89999999999999999986641
Q ss_pred --------EEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCC--------Cceecc------------------
Q 045405 142 --------FSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNP--------GVSDSI------------------ 187 (240)
Q Consensus 142 --------~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~P--------g~~~~~------------------ 187 (240)
..++|++||+++||+|++||++|.|++++++++++++.++ ..+.++
T Consensus 105 ~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (476)
T 1fxz_A 105 SRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQ 184 (476)
T ss_dssp -----CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC------
T ss_pred cccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccccc
Confidence 2578999999999999999999999999999999985543 233332
Q ss_pred --------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCCe
Q 045405 188 --------------GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDGR 232 (240)
Q Consensus 188 --------------~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~~ 232 (240)
.++|+ +|++++|++||+++.+++++|++.+. ...||++.++.
T Consensus 185 ~~~~~~~~~~~~~~~~if~---gf~~~vLa~af~v~~~~~~kl~~~~~~~~~g~Iv~v~~~l 243 (476)
T 1fxz_A 185 SQKGKHQQEEENEGGSILS---GFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGGL 243 (476)
T ss_dssp -------------CCCGGG---GSCHHHHHHHHTCCHHHHHHHSCC-----CCSEEECSSCC
T ss_pred ccccccccccccccchhhh---cCCHHHHHhhhCCCHHHHHhhhccccccccccEEEeCCcc
Confidence 47998 89999999999999999999998877 55688877653
No 20
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.93 E-value=2.6e-25 Score=209.02 Aligned_cols=167 Identities=13% Similarity=0.131 Sum_probs=135.7
Q ss_pred CCCeeeecCCCCCccCcCCceEEEecc--cCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEcc
Q 045405 61 SDDFFTDFSKDPTTFDVFKRAVTFGDV--FGFPAVNTQG-VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTT 137 (240)
Q Consensus 61 ~~df~f~l~~~~~~~~~~G~~v~~~~~--~~~P~l~~~g-ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~ 137 (240)
.+.|+|...+........+|.+..++. .+.|.+++++ +++++++++||++.+|| |++++|++||++|+++++++++
T Consensus 46 ~~p~vf~~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~ 124 (445)
T 2cav_A 46 NNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP 124 (445)
T ss_dssp CCTTEECGGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEET
T ss_pred CCCeEEchhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeC
Confidence 456777543322122456787888754 4567898888 99999999999999999 6689999999999999999987
Q ss_pred CCeEEEEEECCCCEEEeCCCCeEEEEecC-CCCEEEEEEEe-CCCCCce---ecc-----chhhcCCCCCCHHHHHhhcC
Q 045405 138 NNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFN-TQNPGVS---DSI-----GTLFDTTPPVPNEVLTKSFR 207 (240)
Q Consensus 138 ~g~~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~i~~~~-s~~Pg~~---~~~-----~~lf~s~~~~p~~vla~af~ 207 (240)
+++ +++++++||++++|+|.+||++|.| +++++++++++ +++||.+ .++ .++|+ ++|++||+++|+
T Consensus 125 ~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~---~~~~~vLa~af~ 200 (445)
T 2cav_A 125 DGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLEASYD 200 (445)
T ss_dssp TEE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHHHHHT
T ss_pred CCC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh---cCCHHHHHHHhC
Confidence 655 6899999999999999999999998 89999999887 5667643 333 37898 799999999999
Q ss_pred CCHHHHHHHHhhc-CCCceEEecCCe
Q 045405 208 VGDDVINTIRAAR-AQSSWINILDGR 232 (240)
Q Consensus 208 v~~~~v~~l~~~~-~~~~~i~~~~~~ 232 (240)
++.+++++|++.. ....++++.+++
T Consensus 201 v~~~~v~~l~~~~~~~g~Iv~~~~~~ 226 (445)
T 2cav_A 201 SPYDEIEQTLLQEEQEGVIVKMPKDQ 226 (445)
T ss_dssp SCHHHHHHHTTSCCSSSSEEECCCC-
T ss_pred CCHHHHHhhhcccCCCCcEEEeCCcc
Confidence 9999999999644 456688877664
No 21
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.93 E-value=2.7e-25 Score=206.08 Aligned_cols=167 Identities=14% Similarity=0.114 Sum_probs=137.7
Q ss_pred CCCeeeecCC-CCCccCcCCceEEEe--cccCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEc
Q 045405 61 SDDFFTDFSK-DPTTFDVFKRAVTFG--DVFGFPAVNTQG-VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVT 136 (240)
Q Consensus 61 ~~df~f~l~~-~~~~~~~~G~~v~~~--~~~~~P~l~~~g-ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~ 136 (240)
.+.|+|...+ -.+.....||.++.+ ...+.|.|++++ +++++++++|||+.+|||| +++|++||++|++++++++
T Consensus 11 ~~p~~f~~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~ 89 (397)
T 2phl_A 11 DNPFYFNSDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVK 89 (397)
T ss_dssp CCTTEECGGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEE
T ss_pred CCCcEeccchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEe
Confidence 3567775433 223447888888887 456679999998 9999999999999999999 7899999999999999999
Q ss_pred cCCeEEEEEECCCCE------EEeCCCCeEEEEecC-CCCEEEEEEEeCCC-C--Cceecc-----chhhcCCCCCCHHH
Q 045405 137 TNNTFFSKVLTPGKV------FLIPRALVHFQLNVG-NEPATFIPIFNTQN-P--GVSDSI-----GTLFDTTPPVPNEV 201 (240)
Q Consensus 137 ~~g~~~~~~l~~GDv------~v~P~G~~H~~~N~G-~~~a~~i~~~~s~~-P--g~~~~~-----~~lf~s~~~~p~~v 201 (240)
++++ .+++|++||+ ++||+|.+||++|.| ++++++++++++.+ | ..+.++ .++|+ ++|++|
T Consensus 90 ~~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~---~~~~~v 165 (397)
T 2phl_A 90 PDDR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ---EFSKHI 165 (397)
T ss_dssp TTTE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG---GSCHHH
T ss_pred CCCc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh---cCCHHH
Confidence 8776 4899999999 999999999999999 78999999987543 4 234443 35888 799999
Q ss_pred HHhhcCCCHHHHHHHH-hhc--CCCceEEecCCe
Q 045405 202 LTKSFRVGDDVINTIR-AAR--AQSSWINILDGR 232 (240)
Q Consensus 202 la~af~v~~~~v~~l~-~~~--~~~~~i~~~~~~ 232 (240)
|+++|+++.+++++|+ +.. ....++++..++
T Consensus 166 La~af~v~~~~v~~l~~~~~~q~~~~Iv~~~~~~ 199 (397)
T 2phl_A 166 LEASFNSKFEEINRVLFEEEGQQEGVIVNIDSEQ 199 (397)
T ss_dssp HHHHHTSCHHHHHHHHTCSTTCBSSSEEECCTTT
T ss_pred HHHHhCCCHHHHHhhhhcccccccCceEEcCccc
Confidence 9999999999999999 443 245688877664
No 22
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.92 E-value=3.3e-25 Score=207.82 Aligned_cols=164 Identities=16% Similarity=0.164 Sum_probs=133.7
Q ss_pred CCeeeecCC-CCCccCcCCceEEEec--ccCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEcc
Q 045405 62 DDFFTDFSK-DPTTFDVFKRAVTFGD--VFGFPAVNTQG-VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTT 137 (240)
Q Consensus 62 ~df~f~l~~-~~~~~~~~G~~v~~~~--~~~~P~l~~~g-ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~ 137 (240)
+.|+|.+.+ -.......||++..++ ..+.|.|++++ +++++++|+||++.+|| |++++|++||++|+++++++++
T Consensus 21 ~p~~f~~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~ 99 (434)
T 2ea7_A 21 NPFYFNSDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNP 99 (434)
T ss_dssp CTTEECTTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS
T ss_pred CCeEEeccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeC
Confidence 457776544 2233456788888874 35668899988 99999999999999999 7799999999999999999986
Q ss_pred CCeEEEEEECCCCEEEeCCCCeEEEEecC-CCCEEEEEEEe-CCCCCce---eccc-----hhhcCCCCCCHHHHHhhcC
Q 045405 138 NNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFN-TQNPGVS---DSIG-----TLFDTTPPVPNEVLTKSFR 207 (240)
Q Consensus 138 ~g~~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~i~~~~-s~~Pg~~---~~~~-----~lf~s~~~~p~~vla~af~ 207 (240)
++.+.+++++||++++|+|.+||++|.| +++++++++++ +++|+.+ .++. ++|+ ++|++||+++|+
T Consensus 100 -~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~---~~~~~vLa~af~ 175 (434)
T 2ea7_A 100 -DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR---GFSKNILEASFD 175 (434)
T ss_dssp -SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG---GSCHHHHHHHHT
T ss_pred -CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh---cCCHHHHHHHhC
Confidence 4456889999999999999999999998 88999999875 6777643 3443 4888 799999999999
Q ss_pred CCHHHHHHHH-hhc----------CCCceEEecC
Q 045405 208 VGDDVINTIR-AAR----------AQSSWINILD 230 (240)
Q Consensus 208 v~~~~v~~l~-~~~----------~~~~~i~~~~ 230 (240)
++.+++++|+ +.. ....++++.+
T Consensus 176 v~~~~v~~l~~~~~~~~~~~~~~q~~g~Iv~~~~ 209 (434)
T 2ea7_A 176 SDFKEINRVLFGEERQQQQGEESREEGVIVELKR 209 (434)
T ss_dssp SCHHHHHHHHTCC---------CCCSSSEEECCH
T ss_pred CCHHHHHhhhhcccccccccccccccceEEECCc
Confidence 9999999999 653 2455776543
No 23
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.92 E-value=3.1e-25 Score=206.99 Aligned_cols=164 Identities=16% Similarity=0.196 Sum_probs=134.2
Q ss_pred CCCeeee-cCCCCCccCcCCceEEEecc--cCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEc
Q 045405 61 SDDFFTD-FSKDPTTFDVFKRAVTFGDV--FGFPAVNTQG-VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVT 136 (240)
Q Consensus 61 ~~df~f~-l~~~~~~~~~~G~~v~~~~~--~~~P~l~~~g-ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~ 136 (240)
.+.|+|. ..+........||+++.+.. ...+.|++++ +++++++++||++.+|| |++++|++||++|++++++++
T Consensus 8 ~~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 86 (416)
T 1uij_A 8 NNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVN 86 (416)
T ss_dssp SCTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEEC
T ss_pred CCCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEE
Confidence 3557775 54433334677888888743 4558888887 99999999999999999 778999999999999999998
Q ss_pred cCCeEEEEEECCCCEEEeCCCCeEEEEecC-CCCEEEEEEEe-CCCCCce---eccc-----hhhcCCCCCCHHHHHhhc
Q 045405 137 TNNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFN-TQNPGVS---DSIG-----TLFDTTPPVPNEVLTKSF 206 (240)
Q Consensus 137 ~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~i~~~~-s~~Pg~~---~~~~-----~lf~s~~~~p~~vla~af 206 (240)
+ ++.+++++++||++++|+|.+||++|.| +++++++++++ +++||.+ .++. ++|+ ++|++||+++|
T Consensus 87 ~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~---~~~~~vLa~af 162 (416)
T 1uij_A 87 N-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ---GFSHNILETSF 162 (416)
T ss_dssp S-SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG---GSCHHHHHHHH
T ss_pred C-CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh---cCCHHHHHHHh
Confidence 8 5556899999999999999999999995 99999999986 5677643 3442 5888 79999999999
Q ss_pred CCCHHHHHHHH-hhcC-----CCceEEec
Q 045405 207 RVGDDVINTIR-AARA-----QSSWINIL 229 (240)
Q Consensus 207 ~v~~~~v~~l~-~~~~-----~~~~i~~~ 229 (240)
+++++++++|+ +.++ ...++++.
T Consensus 163 ~v~~~~v~~l~~~~~~~~~~~~g~Iv~~~ 191 (416)
T 1uij_A 163 HSEFEEINRVLFGEEEEQRQQEGVIVELS 191 (416)
T ss_dssp TSCHHHHHHHHTCTTCGGGSBSSSEEECC
T ss_pred CcCHHHHHhhhhccccccccCcceEEEeC
Confidence 99999999999 6652 34577754
No 24
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.91 E-value=2.1e-24 Score=204.94 Aligned_cols=153 Identities=20% Similarity=0.309 Sum_probs=127.6
Q ss_pred CcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe---------------
Q 045405 76 DVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT--------------- 140 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~--------------- 140 (240)
...|+. +.+...+.|.|+++|+++++++|+|||+++||||+ ++|++||++|+++++++.+++.
T Consensus 24 ~se~G~-~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~ 101 (493)
T 2d5f_A 24 ESEGGL-IETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGS 101 (493)
T ss_dssp ECSSEE-EEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC--------
T ss_pred ecCCcE-EEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccc
Confidence 455774 55566777999999999999999999999999996 6899999999999999987631
Q ss_pred ----------EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCC--------Cceecc---------------
Q 045405 141 ----------FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNP--------GVSDSI--------------- 187 (240)
Q Consensus 141 ----------~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~P--------g~~~~~--------------- 187 (240)
...+.|++||+++||+|++||++|.|+++++++++++..+. ..+.++
T Consensus 102 ~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~ 181 (493)
T 2d5f_A 102 RSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQ 181 (493)
T ss_dssp -----CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC---
T ss_pred ccccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhcc
Confidence 02458999999999999999999999999999999974322 233333
Q ss_pred --------------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCCc-eEEecCCee
Q 045405 188 --------------------GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQSS-WINILDGRS 233 (240)
Q Consensus 188 --------------------~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~~-~i~~~~~~~ 233 (240)
.++|+ +|++++|++||+++.+++++|++.+..++ ||++.++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~nif~---gf~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv~v~~~l~ 245 (493)
T 2d5f_A 182 QQKSHGGRKQGQHQQQEEEGGSVLS---GFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEGGLS 245 (493)
T ss_dssp ------------------CCCCGGG---GSCHHHHHHHTTCCHHHHHHTTCTTCCSCSEEECTTCCC
T ss_pred cccccccccccccccccccccchhh---cCCHHHHHhHhCCCHHHHHHhhhcccCcccEEEeCCCcc
Confidence 47998 89999999999999999999999888555 888776643
No 25
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.91 E-value=1.8e-24 Score=203.72 Aligned_cols=154 Identities=16% Similarity=0.283 Sum_probs=130.4
Q ss_pred cCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EE-----------
Q 045405 75 FDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FF----------- 142 (240)
Q Consensus 75 ~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~----------- 142 (240)
....||.+..++..+ |+|+++|++++|++++|||+++||||+ ++|++||++|+++++++.+++. .|
T Consensus 21 ~~se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~ 98 (466)
T 3kgl_A 21 LKAEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGG 98 (466)
T ss_dssp EEETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-
T ss_pred eeCCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccc
Confidence 357788788887665 999999999999999999999999996 8999999999999999988542 11
Q ss_pred -----------------------------------------------EEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 143 -----------------------------------------------SKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 143 -----------------------------------------------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
...|++||+++||+|.+||++|.|+++++++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~ 178 (466)
T 3kgl_A 99 SPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSV 178 (466)
T ss_dssp ----------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEE
Confidence 148999999999999999999999999999999
Q ss_pred EeCCCC--------Cceecc------------------chhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcCCC-ceEEe
Q 045405 176 FNTQNP--------GVSDSI------------------GTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARAQS-SWINI 228 (240)
Q Consensus 176 ~~s~~P--------g~~~~~------------------~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~~~-~~i~~ 228 (240)
++..|+ ..+.++ .++|+ +|+.++|++||+++.+++++|+..+..+ .||++
T Consensus 179 ~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s---GF~~e~La~Af~v~~e~~~kL~~~q~~~G~Iv~v 255 (466)
T 3kgl_A 179 LDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN---GFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRV 255 (466)
T ss_dssp EESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG---GSCHHHHHHHHTSCHHHHHHHTCTTCCSCSEEEC
T ss_pred EcCCCcccccCCceeeeEecCCCccccccccccccccCCCccc---cCCHHHHHHHhCCCHHHHHHHhccccCceeEEEe
Confidence 976543 334443 37998 8999999999999999999999988744 58888
Q ss_pred cCCee
Q 045405 229 LDGRS 233 (240)
Q Consensus 229 ~~~~~ 233 (240)
.++.+
T Consensus 256 ~~~l~ 260 (466)
T 3kgl_A 256 QGPFS 260 (466)
T ss_dssp CSCCC
T ss_pred cCccc
Confidence 75543
No 26
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.91 E-value=2e-24 Score=201.43 Aligned_cols=151 Identities=15% Similarity=0.239 Sum_probs=120.0
Q ss_pred CCeeeecCCCCCccCcCCceEEEec-----ccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEc
Q 045405 62 DDFFTDFSKDPTTFDVFKRAVTFGD-----VFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVT 136 (240)
Q Consensus 62 ~df~f~l~~~~~~~~~~G~~v~~~~-----~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~ 136 (240)
+.|+|..++-.......+|.+..+. ...+|+|+ ++++++++++|||+.+|| |++|+|++||++|++++++++
T Consensus 5 ~p~~f~~~~f~~~~~se~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~ 81 (418)
T 3s7i_A 5 NPFYFPSRRFSTRYGNQNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVAN 81 (418)
T ss_dssp CTTEECGGGEEEEEECSSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred CCcccccccccceEEcCCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEe
Confidence 4566643331123356778888884 24566666 678889999999999999 889999999999999999999
Q ss_pred cCCeEEEEEECCCCEEEeCCCCeEEEEecCCC-CEEEEEE-EeCCCCCceec--------cchhhcCCCCCCHHHHHhhc
Q 045405 137 TNNTFFSKVLTPGKVFLIPRALVHFQLNVGNE-PATFIPI-FNTQNPGVSDS--------IGTLFDTTPPVPNEVLTKSF 206 (240)
Q Consensus 137 ~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~-~a~~i~~-~~s~~Pg~~~~--------~~~lf~s~~~~p~~vla~af 206 (240)
+++ .+.++|++||+++||+|.+||++|.|+. .++++++ +++++||.+.. ..++|+ +||++||+++|
T Consensus 82 ~~~-~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~---gf~~evLa~af 157 (418)
T 3s7i_A 82 GNN-RKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ---GFSRNTLEAAF 157 (418)
T ss_dssp SSC-EEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG---GSCHHHHHHHH
T ss_pred cCC-EEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh---cCCHHHHHHHH
Confidence 854 4589999999999999999999998754 5666653 46777876432 136888 79999999999
Q ss_pred CCCHHHHHHHHhh
Q 045405 207 RVGDDVINTIRAA 219 (240)
Q Consensus 207 ~v~~~~v~~l~~~ 219 (240)
+++.+++++|+..
T Consensus 158 ~v~~~~v~kl~~~ 170 (418)
T 3s7i_A 158 NAEFNEIRRVLLE 170 (418)
T ss_dssp TSCHHHHHHHTTS
T ss_pred CcCHHHHHhhhcc
Confidence 9999999999844
No 27
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.91 E-value=3.7e-24 Score=203.58 Aligned_cols=152 Identities=16% Similarity=0.248 Sum_probs=126.8
Q ss_pred CcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeE--------------
Q 045405 76 DVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTF-------------- 141 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~-------------- 141 (240)
...||.+.. ...+.|+|+|+|+++++++|+|||+.+||||+ ++|++||++|+++++++++++..
T Consensus 27 ~se~G~~e~-~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~ 104 (510)
T 3c3v_A 27 ESEGGYIET-WNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQS 104 (510)
T ss_dssp EETTEEEEE-CCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC------
T ss_pred ccCCceEEE-eCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccc
Confidence 567775444 55666999999999999999999999999995 79999999999999999986410
Q ss_pred ---------------------EEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCC--------Cceecc-----
Q 045405 142 ---------------------FSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNP--------GVSDSI----- 187 (240)
Q Consensus 142 ---------------------~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~P--------g~~~~~----- 187 (240)
..+.|++||+++||+|++||++|.|++++++|++++..|+ ..+.++
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~ 184 (510)
T 3c3v_A 105 QRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQ 184 (510)
T ss_dssp --------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCC
T ss_pred ccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCccc
Confidence 1268999999999999999999999999999999986553 222222
Q ss_pred -------------------------------------------------------chhhcCCCCCCHHHHHhhcCCC-HH
Q 045405 188 -------------------------------------------------------GTLFDTTPPVPNEVLTKSFRVG-DD 211 (240)
Q Consensus 188 -------------------------------------------------------~~lf~s~~~~p~~vla~af~v~-~~ 211 (240)
.++|+ +|++++|+++|+++ ++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~~~La~af~v~~~~ 261 (510)
T 3c3v_A 185 EFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS---GFTPEFLAQAFQVDDRQ 261 (510)
T ss_dssp TTGGGCC------------------------------------------------CCTGG---GSCHHHHHHHHTCCCHH
T ss_pred ccchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee---cCCHHHHHHHhCCCHHH
Confidence 36998 89999999999999 99
Q ss_pred HHHHHHhhcC---CCceEEecCCe
Q 045405 212 VINTIRAARA---QSSWINILDGR 232 (240)
Q Consensus 212 ~v~~l~~~~~---~~~~i~~~~~~ 232 (240)
++++|+.... ...||++.++.
T Consensus 262 ~~~~l~~~~~~~~~g~Iv~v~~~l 285 (510)
T 3c3v_A 262 IVQNLRGENESEEQGAIVTVRGGL 285 (510)
T ss_dssp HHHHHTTTTCCTTSCSEEECTTCC
T ss_pred HHHHhhccccccccccEEEeCCcc
Confidence 9999998776 44688876553
No 28
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.91 E-value=3.1e-24 Score=203.74 Aligned_cols=156 Identities=15% Similarity=0.269 Sum_probs=130.0
Q ss_pred ccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EE----------
Q 045405 74 TFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FF---------- 142 (240)
Q Consensus 74 ~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~---------- 142 (240)
.....||....++ .++|+|+|+|++++|++|.|+|+++||||+ ++|++||++|++.++++.|++. .|
T Consensus 25 ~i~se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~ 102 (531)
T 3fz3_A 25 RIQAEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQG 102 (531)
T ss_dssp EEEETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC-----
T ss_pred hcccCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCcccccccccccccc
Confidence 3467788666665 679999999999999999999999999996 9999999999999999988531 11
Q ss_pred ----------------------------------------------------------------------EEEECCCCEE
Q 045405 143 ----------------------------------------------------------------------SKVLTPGKVF 152 (240)
Q Consensus 143 ----------------------------------------------------------------------~~~l~~GDv~ 152 (240)
...+++||++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDvi 182 (531)
T 3fz3_A 103 RQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVV 182 (531)
T ss_dssp --------------------------------------------------------------CCSCEESCCEEEETTEEE
T ss_pred ccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEE
Confidence 2478999999
Q ss_pred EeCCCCeEEEEecCCCCEEEEEEEeCCCC--------Cceec--------------------------------------
Q 045405 153 LIPRALVHFQLNVGNEPATFIPIFNTQNP--------GVSDS-------------------------------------- 186 (240)
Q Consensus 153 v~P~G~~H~~~N~G~~~a~~i~~~~s~~P--------g~~~~-------------------------------------- 186 (240)
++|+|++||++|.|+++++++++++..|. ..+.+
T Consensus 183 aiPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (531)
T 3fz3_A 183 AIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQ 262 (531)
T ss_dssp EECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC----------------------------
T ss_pred EECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchh
Confidence 99999999999999999999999975432 12222
Q ss_pred -----cchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhcC-CCceEEecCCeee
Q 045405 187 -----IGTLFDTTPPVPNEVLTKSFRVGDDVINTIRAARA-QSSWINILDGRSI 234 (240)
Q Consensus 187 -----~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~~-~~~~i~~~~~~~~ 234 (240)
..++|+ +|+.++|++||+++.++++||+...+ ...||++.++.++
T Consensus 263 ~~~~~~~nifs---GFs~e~La~A~~v~~~~a~kLq~~~~~rg~IVrv~~~l~~ 313 (531)
T 3fz3_A 263 EQQGNGNNVFS---GFNTQLLAQALNVNEETARNLQGQNDNRNQIIQVRGNLDF 313 (531)
T ss_dssp ----CCSSGGG---GSCHHHHHHHHTSCHHHHHHHHTSSCCSCSEEECSSSCCC
T ss_pred hhcccCCCeee---cCCHHHHHHHHCCCHHHHHHHhcccccCceEEEecCCCcc
Confidence 137999 89999999999999999999998877 4558888876654
No 29
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.91 E-value=1.5e-23 Score=190.54 Aligned_cols=158 Identities=16% Similarity=0.239 Sum_probs=139.2
Q ss_pred CCCCCCCCeee-ecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEE
Q 045405 56 ASNVTSDDFFT-DFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGL 134 (240)
Q Consensus 56 ~~~v~~~df~f-~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~ 134 (240)
+.....++|+| .+..++ ..+..|++++.+...++|+++ ++++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQP-LVSLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCC-SEEETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCC-cccCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 44566789988 454444 446788999999999999987 57889999999999999999988999999999999999
Q ss_pred EccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceeccchhhcCCCCCCHHHHHhhcCCCHHHHH
Q 045405 135 VTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTLFDTTPPVPNEVLTKSFRVGDDVIN 214 (240)
Q Consensus 135 v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~ 214 (240)
++++|+..++.+++||++++|+|..|++.|.|+++++++++++.++++...+++ +++ ++|++||+++|++++++++
T Consensus 271 ~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~-~~~---~~~~~vl~~~f~~~~~~~~ 346 (361)
T 2vqa_A 271 FASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST-WLA---SNPSSVLGNTFQISPELTK 346 (361)
T ss_dssp ECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH-HHH---TSCHHHHHHHHTCCHHHHT
T ss_pred EcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH-Hhh---hCCHHHHHHHHCcCHHHHH
Confidence 887777667899999999999999999999999999999999999999888885 677 6999999999999999999
Q ss_pred HHHhhc
Q 045405 215 TIRAAR 220 (240)
Q Consensus 215 ~l~~~~ 220 (240)
+|++..
T Consensus 347 ~l~~~~ 352 (361)
T 2vqa_A 347 KLPVQD 352 (361)
T ss_dssp TSCCSC
T ss_pred hhhccC
Confidence 998553
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.87 E-value=3e-21 Score=175.36 Aligned_cols=151 Identities=19% Similarity=0.262 Sum_probs=129.5
Q ss_pred CeeeecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEE
Q 045405 63 DFFTDFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFF 142 (240)
Q Consensus 63 df~f~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~ 142 (240)
.++|.+....+. ...||.++.++..++|.+. ++++.++++.||+..++|||+++.|++||++|++++++++++|+..
T Consensus 20 ~~~~~~~~~~~~-~~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~ 96 (361)
T 2vqa_A 20 AFTYAFSKTPLV-LYDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE 96 (361)
T ss_dssp CSEECGGGSCCE-EETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE
T ss_pred ceEEEcccCCce-ecCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE
Confidence 377765554444 3578889999999999988 5799999999999999999987899999999999999998877444
Q ss_pred EEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCC---ceeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 045405 143 SKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPG---VSDSIGTLFDTTPPVPNEVLTKSFRVGDDVINTIRAA 219 (240)
Q Consensus 143 ~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg---~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~ 219 (240)
.+.|++||++++|+|..|++.|.|+++++++.+++..++. .+.. .++|+ ++|.++|+++|+++.+.++++++.
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~---~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSV-TDWLS---HTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEH-HHHHH---TSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecH-hHHHH---hCCHHHHHHHhCcCHHHHHhcccc
Confidence 6899999999999999999999999999999999877664 3444 46788 799999999999999999999865
Q ss_pred c
Q 045405 220 R 220 (240)
Q Consensus 220 ~ 220 (240)
.
T Consensus 173 ~ 173 (361)
T 2vqa_A 173 Q 173 (361)
T ss_dssp C
T ss_pred C
Confidence 4
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.82 E-value=3.7e-19 Score=163.14 Aligned_cols=155 Identities=17% Similarity=0.262 Sum_probs=129.3
Q ss_pred CCCCeeeecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC
Q 045405 60 TSDDFFTDFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN 139 (240)
Q Consensus 60 ~~~df~f~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g 139 (240)
....|+|.+...... ...|+.++.+....++..+ ++++.+++++||+..++|||+.+.|++||++|++++.+.+++|
T Consensus 222 ~~~~~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g 298 (385)
T 1j58_A 222 VPYPFTYRLLEQEPI-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDG 298 (385)
T ss_dssp CSSCSEEEGGGSCCE-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETT
T ss_pred CCCCeeeecccCCCe-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCC
Confidence 345677855444334 3456777888888887654 6899999999999999999988899999999999999986666
Q ss_pred eEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 045405 140 TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTLFDTTPPVPNEVLTKSFRVGDDVINTIRAA 219 (240)
Q Consensus 140 ~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~ 219 (240)
+..++.+++||++++|+|..|++.|.|++++++++++....+....+.+ +++ .+|+++++++|+++++++++|++.
T Consensus 299 ~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~-~l~---~~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 299 HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQ-WLA---MLPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHH-HHH---TSCHHHHHHHHTCCHHHHTTCCSS
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHH-HHH---hCCHHHHHHHhCCCHHHHHhhhcc
Confidence 5457899999999999999999999999999999999877777766654 567 699999999999999999999876
Q ss_pred cC
Q 045405 220 RA 221 (240)
Q Consensus 220 ~~ 221 (240)
..
T Consensus 375 ~~ 376 (385)
T 1j58_A 375 KH 376 (385)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.80 E-value=1.8e-19 Score=165.14 Aligned_cols=148 Identities=20% Similarity=0.258 Sum_probs=125.2
Q ss_pred eeeecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEE
Q 045405 64 FFTDFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFS 143 (240)
Q Consensus 64 f~f~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~ 143 (240)
++|.+...... ...||+++.++...+|.++ ++++.++++.||+..++|||+ +.|++||++|++++++++++|+.+.
T Consensus 48 ~~~~~~~~~~~-~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~~ 123 (385)
T 1j58_A 48 MKFSFSDTHNR-LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSFI 123 (385)
T ss_dssp CEECGGGSCCE-EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEEE
T ss_pred eEEEcccCCcc-ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEEE
Confidence 77755544333 3578889999999999988 789999999999999999998 7999999999999999988788666
Q ss_pred EEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCcee--ccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhh
Q 045405 144 KVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSD--SIGTLFDTTPPVPNEVLTKSFRVGDDVINTIRAA 219 (240)
Q Consensus 144 ~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~--~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~ 219 (240)
+.+++||++++|+|..|++.|.+ ++++++.+|+...+.... ...++|+ .+|.++|+++|+++.++++++.+.
T Consensus 124 ~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~p~evla~~~~vs~~~~~~l~~~ 197 (385)
T 1j58_A 124 DDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLA---HTPKEVIAANFGVTKEEISNLPGK 197 (385)
T ss_dssp EEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHH---TSCHHHHHHHHTCCTGGGTTSCSS
T ss_pred EEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhh---cccHHHHHHHhCCCHHHHHhcccc
Confidence 79999999999999999999987 458888889877765432 1246888 799999999999999999888653
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.74 E-value=8.3e-19 Score=127.86 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=65.0
Q ss_pred eec-CCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe
Q 045405 66 TDF-SKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT 140 (240)
Q Consensus 66 f~l-~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~ 140 (240)
|+| ++.|.++|..|. ++.+++.++|+|+++|+|++|+++.||++.+|||||+|+|++||++|++++++++++|+
T Consensus 4 fnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp EETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred cccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 543 455677777776 59999999999999999999999999999999999999999999999999999988764
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=5.4e-14 Score=108.56 Aligned_cols=84 Identities=23% Similarity=0.322 Sum_probs=73.0
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++.+.++.++||+..++|||+...|++||++|++++.+. +++ ...+++||++++|+|..|++.|.+++++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQG--NGI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECS--TTC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEEC--CCe--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 578899999999999999998779999999999998762 355 6799999999999999999999999999999998
Q ss_pred eCCCCCce
Q 045405 177 NTQNPGVS 184 (240)
Q Consensus 177 ~s~~Pg~~ 184 (240)
....+++.
T Consensus 114 ~p~~~~~~ 121 (125)
T 3h8u_A 114 APGNAGFA 121 (125)
T ss_dssp ESTTCCCC
T ss_pred CCCcccch
Confidence 77666654
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.48 E-value=9.3e-14 Score=120.64 Aligned_cols=82 Identities=17% Similarity=0.155 Sum_probs=70.9
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEE--------Ecc-------CCeEEEEEECCCCEEEeCCCCe
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGL--------VTT-------NNTFFSKVLTPGKVFLIPRALV 159 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~--------v~~-------~g~~~~~~l~~GDv~v~P~G~~ 159 (240)
+.++++.+++++||+..++|+|++..|++||++|++++.+ .+. +++.+...+++||++++|+|.+
T Consensus 40 ~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~ 119 (239)
T 2xlg_A 40 DIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYM 119 (239)
T ss_dssp TEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEE
T ss_pred CCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCC
Confidence 3468899999999999999999988999999999999987 322 1345578999999999999999
Q ss_pred EEEEecCCCCEEE-EEEE
Q 045405 160 HFQLNVGNEPATF-IPIF 176 (240)
Q Consensus 160 H~~~N~G~~~a~~-i~~~ 176 (240)
|.+.|.+++++++ +..+
T Consensus 120 H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 120 HGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCCEEEEEEEE
Confidence 9999999999888 6666
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.46 E-value=6e-13 Score=107.58 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=70.7
Q ss_pred ceEEEEEEEcCCc-ccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCC-CeEEEEecCCCCEEEEE
Q 045405 97 GVALFRIDLDVGG-INPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRA-LVHFQLNVGNEPATFIP 174 (240)
Q Consensus 97 gls~~~v~l~pGg-~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G-~~H~~~N~G~~~a~~i~ 174 (240)
++.+.++.++||+ ..++|||+...|++||++|++++.+ +++ .+.+++||++++|+| ..|++.|.|+++++++.
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---END--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CCE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 6889999999999 5899999778999999999999987 355 689999999999997 99999999999999988
Q ss_pred EEeCCC
Q 045405 175 IFNTQN 180 (240)
Q Consensus 175 ~~~s~~ 180 (240)
+.....
T Consensus 120 v~~p~~ 125 (162)
T 3l2h_A 120 IGQRLD 125 (162)
T ss_dssp EEECCS
T ss_pred EECCCC
Confidence 876544
No 37
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.46 E-value=6.7e-13 Score=107.51 Aligned_cols=114 Identities=18% Similarity=0.140 Sum_probs=83.3
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccC----CeEEEEEECCCCEEEeCCCCeEEEEecC-CCCEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTN----NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPAT 171 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~----g~~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~ 171 (240)
++.+.++.++||+..++|+|+ ..|++||++|++++.+.+.+ ++...+.+++||++++|+|..|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 588999999999999999996 58999999999999886421 1112789999999999999999999999 89999
Q ss_pred EEEEEeCCCCCceeccchhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 045405 172 FIPIFNTQNPGVSDSIGTLFDTTPPVPNEVLTKSFRVGDDVINT 215 (240)
Q Consensus 172 ~i~~~~s~~Pg~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~~ 215 (240)
++.++........... .+.. .+....+...+.++.+.+++
T Consensus 119 ~l~i~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAKIFLYD-DWSM---PHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCCEEEES-STTS---CGGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCccccccc-cccc---CCcCccceeccccccccccc
Confidence 9988765433322222 2332 23333444445566665554
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.44 E-value=9.8e-13 Score=96.89 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=69.4
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
+.++.+.++.++||+..++|+|+...|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.++.
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GEE--EALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 3468899999999999999999877899999999999887 355 68999999999999999999999999999887
Q ss_pred EEe
Q 045405 175 IFN 177 (240)
Q Consensus 175 ~~~ 177 (240)
++.
T Consensus 100 v~~ 102 (105)
T 1v70_A 100 VTA 102 (105)
T ss_dssp EEE
T ss_pred EeC
Confidence 765
No 39
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.43 E-value=5.3e-13 Score=99.22 Aligned_cols=76 Identities=21% Similarity=0.245 Sum_probs=66.9
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
.+.+.+++++||+..++|.|+...|++||++|++++.+. ++ + ...+++||++++|+|..|...|.|+++++++.+
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~g~~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETP--EGSV--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEET--TEEE--EEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeC--CCCE--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 688999999999999999998755799999999998873 22 3 679999999999999999999999999988765
Q ss_pred E
Q 045405 176 F 176 (240)
Q Consensus 176 ~ 176 (240)
-
T Consensus 93 ~ 93 (97)
T 2fqp_A 93 E 93 (97)
T ss_dssp E
T ss_pred E
Confidence 3
No 40
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.41 E-value=6.4e-12 Score=105.04 Aligned_cols=82 Identities=23% Similarity=0.340 Sum_probs=73.4
Q ss_pred ceEEEEEEEcCCcc------cCCccCC--CCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCC
Q 045405 97 GVALFRIDLDVGGI------NPPHTHP--RGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNE 168 (240)
Q Consensus 97 gls~~~v~l~pGg~------~~pH~Hp--~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~ 168 (240)
++.+.++.++||+. .++|+|+ +..|++||++|++.+.+.+..|+.+...+++||++++|+|..|++.|.|++
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~ 145 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDE 145 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcc
Confidence 68888889999998 7899998 457999999999999998766776778999999999999999999999999
Q ss_pred CEEEEEEEeC
Q 045405 169 PATFIPIFNT 178 (240)
Q Consensus 169 ~a~~i~~~~s 178 (240)
++++++++..
T Consensus 146 ~~~~l~v~~~ 155 (190)
T 1x82_A 146 PFIFLAIYPA 155 (190)
T ss_dssp CEEEEEEEET
T ss_pred cEEEEEEECC
Confidence 9999887754
No 41
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.39 E-value=3.1e-12 Score=102.23 Aligned_cols=83 Identities=22% Similarity=0.273 Sum_probs=70.7
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
++.+.++.++||+..++|||+...|++||++|++++.+.+.... .++..+++||++++|+|..|.+.|.+++++.++++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 57888999999999999999877799999999999998643211 12379999999999999999999999999988887
Q ss_pred EeCC
Q 045405 176 FNTQ 179 (240)
Q Consensus 176 ~~s~ 179 (240)
+...
T Consensus 122 ~~~~ 125 (148)
T 2oa2_A 122 YAPP 125 (148)
T ss_dssp EESC
T ss_pred ECCC
Confidence 7543
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.39 E-value=3.2e-12 Score=104.22 Aligned_cols=80 Identities=21% Similarity=0.256 Sum_probs=71.1
Q ss_pred ceEEEEEEEcCCccc-CCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCC--CeEEEEecCCCCEEEE
Q 045405 97 GVALFRIDLDVGGIN-PPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRA--LVHFQLNVGNEPATFI 173 (240)
Q Consensus 97 gls~~~v~l~pGg~~-~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G--~~H~~~N~G~~~a~~i 173 (240)
.+.+.+++++||+.. ++|||+...|++||++|++++.+. ++ .+.|++||++++|+| ..|.+.|.++++++++
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l 116 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD---QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFL 116 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCCCBEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC---CE--EEEeCCCCEEEECCCCCcceEEEECCCCCEEEE
Confidence 689999999999965 899998778999999999999873 55 689999999999999 9999999999999999
Q ss_pred EEEeCCCC
Q 045405 174 PIFNTQNP 181 (240)
Q Consensus 174 ~~~~s~~P 181 (240)
.+......
T Consensus 117 ~v~~p~~~ 124 (163)
T 3i7d_A 117 VVGTRTPT 124 (163)
T ss_dssp EEEECCSC
T ss_pred EEECCCCC
Confidence 88875543
No 43
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.38 E-value=4.3e-12 Score=95.10 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=69.2
Q ss_pred cceEEEEEEEcCCcccCCc--cCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 96 QGVALFRIDLDVGGINPPH--THPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH--~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
.++.+.++.++||+..++| +|++..|++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.++++++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 93 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DGH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTV 93 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 3688999999999998888 99867999999999999887 355 6799999999999999999999999999988
Q ss_pred EEEeC
Q 045405 174 PIFNT 178 (240)
Q Consensus 174 ~~~~s 178 (240)
.++..
T Consensus 94 ~v~~~ 98 (113)
T 2gu9_A 94 NFYHP 98 (113)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 87754
No 44
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.38 E-value=1.5e-11 Score=100.84 Aligned_cols=115 Identities=18% Similarity=0.160 Sum_probs=84.2
Q ss_pred CCCCCCeee-ecCCC---CCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEE
Q 045405 58 NVTSDDFFT-DFSKD---PTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVG 133 (240)
Q Consensus 58 ~v~~~df~f-~l~~~---~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~ 133 (240)
-+..+++.| .+... .......|...+.+..... +....++.+.++.++||+..++|||+ ..|++||++|++.+.
T Consensus 13 iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~ 90 (167)
T 3ibm_A 13 VLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEVV 90 (167)
T ss_dssp EECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEEE
T ss_pred eeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEEE
Confidence 445566667 33221 1111235555555544333 22234688999999999999999996 699999999999998
Q ss_pred EEccCCeEEEEEECCCCEEEeCCCCeEEEEecC-CCCEEEEEEEeCC
Q 045405 134 LVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQ 179 (240)
Q Consensus 134 ~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~i~~~~s~ 179 (240)
+ +++ .+.+++||++++|+|..|.+.|.+ ++++.+++++...
T Consensus 91 i---~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 91 L---DDR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp E---TTE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred E---CCE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 7 355 689999999999999999999999 9999999887643
No 45
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.38 E-value=2.5e-12 Score=101.04 Aligned_cols=85 Identities=21% Similarity=0.354 Sum_probs=72.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++.+.++.++||+..++|||+. .|++||++|++++.+.. +++ .+.+++||++++|+|..|.+.|.+++++.++.++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~-~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~ 113 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHEW-EHEIYVLEGSMGLVLPD-QGR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVA 113 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECSS-CEEEEEEEECEEEEEGG-GTE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEE
T ss_pred cEEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEeE-CCE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEE
Confidence 6889999999999999999975 78889999999988211 355 6899999999999999999999999999999888
Q ss_pred eCCCCCcee
Q 045405 177 NTQNPGVSD 185 (240)
Q Consensus 177 ~s~~Pg~~~ 185 (240)
....|....
T Consensus 114 ~~~~~~~~~ 122 (145)
T 3ht1_A 114 PCERPPVRN 122 (145)
T ss_dssp ESCCCCCEE
T ss_pred CCCCCCeeE
Confidence 766665443
No 46
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.38 E-value=4.9e-13 Score=100.53 Aligned_cols=78 Identities=18% Similarity=0.151 Sum_probs=67.7
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
-.+.+.|++++||+..++|+|+...|++||++|++++... +++.....+++||++++|+|..|...|.|++++++|.+
T Consensus 15 ~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~--d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 15 DEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeC--CCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 3588999999999999999999888999999999988753 34433567899999999999999999999999999876
No 47
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.33 E-value=4.8e-12 Score=104.74 Aligned_cols=80 Identities=20% Similarity=0.327 Sum_probs=71.5
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
.|..+.+++++||+..++|.|+ ..|++||++|++++.+.+ ++ ++.|++||++ +|+|..|.+.|.|+++++++.+
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~--ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDD--GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGG--GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECC--Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 4789999999999999999995 489999999999998742 44 6799999999 9999999999999999999999
Q ss_pred EeCCCC
Q 045405 176 FNTQNP 181 (240)
Q Consensus 176 ~~s~~P 181 (240)
+....|
T Consensus 151 ~~P~~p 156 (172)
T 3es1_A 151 LIEAPA 156 (172)
T ss_dssp EEECCC
T ss_pred EcCCCc
Confidence 987766
No 48
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.33 E-value=4.1e-12 Score=97.86 Aligned_cols=76 Identities=24% Similarity=0.483 Sum_probs=67.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++.+.++.++||+..++|+|+. .|++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.++ ++.++.++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~ 112 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTI---GEE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIF 112 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEE
Confidence 6889999999999999999986 999999999999987 355 6899999999999999999999987 78888877
Q ss_pred eCC
Q 045405 177 NTQ 179 (240)
Q Consensus 177 ~s~ 179 (240)
...
T Consensus 113 ~p~ 115 (126)
T 4e2g_A 113 SPP 115 (126)
T ss_dssp ESC
T ss_pred CCC
Confidence 643
No 49
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.33 E-value=7.8e-12 Score=98.21 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=68.1
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
+..+.+.++.++||+..++|+|++..|++||++|++++.+ +++ .+.|++||++++|+|..|.+.|.+++++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---NGK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE---CCE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 3457788999999999999999766899999999999987 355 67999999999999999999999999998887
Q ss_pred EE
Q 045405 175 IF 176 (240)
Q Consensus 175 ~~ 176 (240)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 50
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.32 E-value=6.3e-12 Score=96.42 Aligned_cols=71 Identities=15% Similarity=0.233 Sum_probs=62.0
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATF 172 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (240)
.++.+.++.++||+..++|||+. .|++||++|++++.+ +++ ++.+++||.+++|+|..|.+.|.++....+
T Consensus 34 ~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 34 HRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGV---DGA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLV 104 (114)
T ss_dssp TTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEESSSEEEEE
T ss_pred CCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeCCCcEEEE
Confidence 36889999999999999999976 799999999999987 355 689999999999999999999986544443
No 51
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.32 E-value=1.1e-11 Score=100.64 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=70.2
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
..+.+.++.++||+..++|||+. .|++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.+++++.++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v---~g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLV---GET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46889999999999999999975 899999999999987 355 689999999999999999999999999999988
Q ss_pred EeCC
Q 045405 176 FNTQ 179 (240)
Q Consensus 176 ~~s~ 179 (240)
+...
T Consensus 116 ~~~~ 119 (156)
T 3kgz_A 116 VNAA 119 (156)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8643
No 52
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.31 E-value=4.3e-11 Score=90.67 Aligned_cols=75 Identities=24% Similarity=0.351 Sum_probs=65.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++.+.++.++||+..++|+|+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+ ++.++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV---DGV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE---CCE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 478999999999999999997 6999999999999887 355 679999999999999999999987 67777777
Q ss_pred eCC
Q 045405 177 NTQ 179 (240)
Q Consensus 177 ~s~ 179 (240)
...
T Consensus 105 ~p~ 107 (116)
T 2pfw_A 105 SPA 107 (116)
T ss_dssp ESC
T ss_pred CCc
Confidence 544
No 53
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.31 E-value=5.2e-11 Score=97.72 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=69.6
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
.++.+.+++++||+..++|||+. .|++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.+++++.++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v---~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMV---GRA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46888999999999999999975 899999999999887 356 689999999999999999999999999999988
Q ss_pred EeC
Q 045405 176 FNT 178 (240)
Q Consensus 176 ~~s 178 (240)
+..
T Consensus 125 ~~~ 127 (166)
T 3jzv_A 125 VNA 127 (166)
T ss_dssp EES
T ss_pred Ecc
Confidence 864
No 54
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.30 E-value=2.6e-11 Score=100.58 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=68.3
Q ss_pred CCccceEEEEEEEcCCcccC---CccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEec-CCC
Q 045405 93 VNTQGVALFRIDLDVGGINP---PHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNV-GNE 168 (240)
Q Consensus 93 l~~~gls~~~v~l~pGg~~~---pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~-G~~ 168 (240)
..+..+.+.+++++||+..+ +|+|+. .|++||++|++.+.+.+ ++....+.|++||.+++|++.+|.+.|. +++
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~ 189 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTG 189 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSC
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCC
Confidence 33446889999999999876 799976 89999999999998843 1111278999999999999999999999 999
Q ss_pred CEEEEEEE
Q 045405 169 PATFIPIF 176 (240)
Q Consensus 169 ~a~~i~~~ 176 (240)
++++++++
T Consensus 190 ~~~~l~v~ 197 (198)
T 2bnm_A 190 SAKLIAVN 197 (198)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 99988765
No 55
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.29 E-value=5.5e-12 Score=94.97 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=64.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+.+.+++|+||+..++|.|+...+++|+++|++++.. .+|+.....+++||++++|+|..|+..|.|+++++++++-
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE 93 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--CCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEE
Confidence 68899999999999999999875566667788887654 4465235689999999999999999999999999998763
No 56
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.28 E-value=5e-11 Score=95.40 Aligned_cols=77 Identities=25% Similarity=0.353 Sum_probs=68.7
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEE-EEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFS-KVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~-~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.++.+.++.++||+..++|+|+. .|++||++|++++.+. ++ . +.+++||++++|+|..|++.|.+++++.+++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~---~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 119 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQER---GK--PARILKKGDVVEIPPNVVHWHGAAPDEELVHIG 119 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEET---TS--CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEEC---CE--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 36889999999999999999976 8999999999999873 44 4 6899999999999999999999999999888
Q ss_pred EEeC
Q 045405 175 IFNT 178 (240)
Q Consensus 175 ~~~s 178 (240)
++..
T Consensus 120 v~~~ 123 (147)
T 2f4p_A 120 ISTQ 123 (147)
T ss_dssp EECC
T ss_pred EEcc
Confidence 7754
No 57
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.28 E-value=1.7e-11 Score=93.41 Aligned_cols=74 Identities=18% Similarity=0.244 Sum_probs=65.0
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEE-EECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSK-VLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~-~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
++.+.++.+.||+..++|||+ ..|++||++|++++.+. ++ .+ .+++||++++|+|..|.+.|.+++++.++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLE---DQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEET---TS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEEC---CE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 577888999999999999995 58999999999999873 44 45 8999999999999999999999888888776
Q ss_pred E
Q 045405 176 F 176 (240)
Q Consensus 176 ~ 176 (240)
.
T Consensus 100 ~ 100 (117)
T 2b8m_A 100 K 100 (117)
T ss_dssp E
T ss_pred E
Confidence 3
No 58
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.26 E-value=5.2e-11 Score=91.88 Aligned_cols=75 Identities=21% Similarity=0.251 Sum_probs=66.7
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
..+.+...+++||...++||| +..|++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.+++++.++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H-~~~Ei~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSH-NEYELFIVIQGNAIIRI---NDE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCC-SSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEec-CCeEEEEEEeCEEEEEE---CCE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 358889999999999999999 46999999999999987 356 679999999999999999999999898887765
Q ss_pred E
Q 045405 176 F 176 (240)
Q Consensus 176 ~ 176 (240)
.
T Consensus 106 ~ 106 (128)
T 4i4a_A 106 W 106 (128)
T ss_dssp E
T ss_pred E
Confidence 4
No 59
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.26 E-value=1.8e-11 Score=94.55 Aligned_cols=79 Identities=18% Similarity=0.181 Sum_probs=66.0
Q ss_pred ccceEEEEEEEcCCcccC-CccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 95 TQGVALFRIDLDVGGINP-PHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~-pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
..++.+.++.++||+..+ +|||+...+++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.+++++.++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~ 97 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DGE--KIELQAGDWLRIAPDGKRQISAASDSPIGFL 97 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEE
Confidence 446788889999999888 8999764445559999999887 355 6799999999999999999999998888888
Q ss_pred EEEeC
Q 045405 174 PIFNT 178 (240)
Q Consensus 174 ~~~~s 178 (240)
++...
T Consensus 98 ~i~~~ 102 (125)
T 3cew_A 98 CIQVK 102 (125)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 76543
No 60
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.25 E-value=4.4e-11 Score=93.24 Aligned_cols=77 Identities=19% Similarity=0.168 Sum_probs=58.9
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEe
Q 045405 98 VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFN 177 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~ 177 (240)
+.+.++.++||+..++|+|+...|++||++|++++.+.+ ++ .+.+++||++++|+|..|.+.|.+++ +.++.++.
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~ 117 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED--IG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVS 117 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT--TE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEES
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC--cE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEEC
Confidence 456666677899899999987799999999999998732 25 68999999999999999999998774 57776665
Q ss_pred CC
Q 045405 178 TQ 179 (240)
Q Consensus 178 s~ 179 (240)
..
T Consensus 118 p~ 119 (134)
T 2o8q_A 118 PA 119 (134)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 61
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.24 E-value=2.2e-11 Score=94.52 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=68.2
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
..++.+.++.++||+..++|+|+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.+++++.+++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE---QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 34788999999999999999997 58999999999998863 45 67999999999999999999999999998887
Q ss_pred EEe
Q 045405 175 IFN 177 (240)
Q Consensus 175 ~~~ 177 (240)
++.
T Consensus 119 v~~ 121 (126)
T 1vj2_A 119 LIP 121 (126)
T ss_dssp EEE
T ss_pred EEc
Confidence 664
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.22 E-value=9.1e-11 Score=88.70 Aligned_cols=72 Identities=15% Similarity=0.301 Sum_probs=62.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++.+.++.++||+..++|+|+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+ ++.++.++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v~ 110 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITI---DQE--TYRVAEGQTIVMPAGIPHALYAVE--AFQMLLVV 110 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTSCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEECC--CceEEEEE
Confidence 678899999999999999997 4899999999999886 355 679999999999999999999987 46666554
No 63
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.21 E-value=4.3e-11 Score=104.20 Aligned_cols=78 Identities=12% Similarity=0.105 Sum_probs=66.7
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCC-CCEEEE
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFI 173 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~-~~a~~i 173 (240)
...+.+.+++++||+..+.|+|+...|++||++|++++.+. ++ ++.+++||++++|+|..|++.|.|+ ++++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~---~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD---NN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS---SC--EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 34688999999999999999998779999999999998863 55 6799999999999999999999999 999988
Q ss_pred EEEe
Q 045405 174 PIFN 177 (240)
Q Consensus 174 ~~~~ 177 (240)
.+.+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7654
No 64
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.20 E-value=8.5e-11 Score=101.40 Aligned_cols=79 Identities=19% Similarity=0.225 Sum_probs=68.9
Q ss_pred ceEEEEEEEcC-CcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 97 GVALFRIDLDV-GGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 97 gls~~~v~l~p-Gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
-+.+..++++| |+..++|||+. .|++||++|++++.+ +++ +..+++||.+++|+|..|.+.|.|+++++++.+
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTV---EGC--TVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35677888999 88899999975 899999999999987 355 678999999999999999999999999999998
Q ss_pred EeCCCC
Q 045405 176 FNTQNP 181 (240)
Q Consensus 176 ~~s~~P 181 (240)
+.....
T Consensus 218 ~~p~~~ 223 (243)
T 3h7j_A 218 FFPPRY 223 (243)
T ss_dssp EESCSS
T ss_pred EcCChh
Confidence 875433
No 65
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.20 E-value=7.6e-11 Score=96.98 Aligned_cols=75 Identities=21% Similarity=0.107 Sum_probs=65.2
Q ss_pred ceEEEEEEEcC-CcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 97 GVALFRIDLDV-GGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 97 gls~~~v~l~p-Gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
-+...+++++| |+...+|.|..+.|++||++|++.+.+. ++ .+.|++||.+++|+|..|.+.|.++++++++.+
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~---g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC---KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 36778899999 7777776666789999999999999983 55 679999999999999999999999999988865
Q ss_pred E
Q 045405 176 F 176 (240)
Q Consensus 176 ~ 176 (240)
.
T Consensus 162 q 162 (166)
T 2vpv_A 162 Q 162 (166)
T ss_dssp E
T ss_pred E
Confidence 3
No 66
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.19 E-value=9.3e-11 Score=97.03 Aligned_cols=76 Identities=21% Similarity=0.149 Sum_probs=64.9
Q ss_pred ccceEEEEEEEcCCcccC--CccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEE
Q 045405 95 TQGVALFRIDLDVGGINP--PHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATF 172 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~--pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (240)
...+.+.+++++||+..+ +|+|+ ..|++||++|++++.+ +++ .+.|++||++++|++.+|.+.|.+++++ +
T Consensus 101 ~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~ 173 (192)
T 1y9q_A 101 DTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFF---DEQ--WHELQQGEHIRFFSDQPHGYAAVTEKAV-F 173 (192)
T ss_dssp TTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEE---TTE--EEEECTTCEEEEECSSSEEEEESSSCEE-E
T ss_pred CCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEE---CCE--EEEeCCCCEEEEcCCCCeEeECCCCCcE-E
Confidence 446889999999999765 67774 4899999999999887 355 6799999999999999999999999988 7
Q ss_pred EEEEe
Q 045405 173 IPIFN 177 (240)
Q Consensus 173 i~~~~ 177 (240)
+.++.
T Consensus 174 l~v~~ 178 (192)
T 1y9q_A 174 QNIVA 178 (192)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76654
No 67
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.15 E-value=2e-10 Score=85.70 Aligned_cols=76 Identities=16% Similarity=0.125 Sum_probs=62.8
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeE-EEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEA-GIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei-~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.++.+.++.+.||...++|+|+...|+ +||++|++++.+.+ ++ ...+++||++++|+|..|.+.|.++ +.++.
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~ 104 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG--DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLV 104 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG--GC--EEEECTTEEEEEETTSCEEEEESSS--EEEEE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC--CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEE
Confidence 367889999999999999999755688 89999999987631 34 6799999999999999999999765 45555
Q ss_pred EEe
Q 045405 175 IFN 177 (240)
Q Consensus 175 ~~~ 177 (240)
++.
T Consensus 105 ~~~ 107 (110)
T 2q30_A 105 TIA 107 (110)
T ss_dssp EEE
T ss_pred EEC
Confidence 554
No 68
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.14 E-value=5.3e-10 Score=98.10 Aligned_cols=76 Identities=14% Similarity=0.244 Sum_probs=67.4
Q ss_pred cceEEEEEEEcCCcccCC-ccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCC-CCEEEE
Q 045405 96 QGVALFRIDLDVGGINPP-HTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFI 173 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~-~~a~~i 173 (240)
..+.+.+++++||+..+. |+|+ ..|++||++|++++.+ +++ ++.|++||++++|++.+|++.|.|+ ++++++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNL---DNE--WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 368899999999999888 9996 5899999999999987 355 6899999999999999999999998 888888
Q ss_pred EEEe
Q 045405 174 PIFN 177 (240)
Q Consensus 174 ~~~~ 177 (240)
...+
T Consensus 254 ~~~~ 257 (274)
T 1sef_A 254 YSKD 257 (274)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7643
No 69
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.13 E-value=3.6e-10 Score=100.68 Aligned_cols=77 Identities=17% Similarity=0.163 Sum_probs=68.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+++.++.+.||+..++|||++..|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.++ +++++.++
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~ 118 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DGE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSYT 118 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECST-TEEEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEECCC-CeEEEEEE
Confidence 68899999999999999999868999999999999986 355 6799999999999999999999987 68888777
Q ss_pred eCC
Q 045405 177 NTQ 179 (240)
Q Consensus 177 ~s~ 179 (240)
+..
T Consensus 119 ~p~ 121 (337)
T 1y3t_A 119 MKG 121 (337)
T ss_dssp ETT
T ss_pred CCC
Confidence 644
No 70
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.12 E-value=5.1e-10 Score=84.78 Aligned_cols=72 Identities=13% Similarity=0.183 Sum_probs=60.4
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++.+..+.++||...++|+|+. .|++||++|++.+.+ +++ .+.|++||++++|+|..|.+.|. +++.++.+.
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITF---DDQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEEE
T ss_pred CceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEEE
Confidence 3567778889999999999974 899999999999887 355 67999999999999999999996 356665543
No 71
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.11 E-value=4.6e-10 Score=102.35 Aligned_cols=91 Identities=11% Similarity=0.040 Sum_probs=74.9
Q ss_pred cCCceEEEeccc-CCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeC
Q 045405 77 VFKRAVTFGDVF-GFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIP 155 (240)
Q Consensus 77 ~~G~~v~~~~~~-~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P 155 (240)
..|+.+..++.. ..+.+.+ +++....|+||+..++|+|+.+ |++||++|++++.+ +++ +..+++||++++|
T Consensus 248 ~~G~~~~~~np~t~~~~~~t--i~~~~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v---~~~--~~~~~~GD~~~vP 319 (354)
T 2d40_A 248 WDGYKMRYVNPVTGGYPMPS--MGAFLQLLPKGFASRVARTTDS-TIYHVVEGSGQVII---GNE--TFSFSAKDIFVVP 319 (354)
T ss_dssp TTBEEEEECCTTTSSCSSSS--CEEEEEEECTTCBCCCBEESSC-EEEEEEEEEEEEEE---TTE--EEEEETTCEEEEC
T ss_pred CCCeEEEEeCCCcCCCCCCc--ceeEEEEECCCCCCCceecCCc-EEEEEEeCeEEEEE---CCE--EEEEcCCCEEEEC
Confidence 356678888744 5667775 5666779999999999999875 99999999999998 355 6899999999999
Q ss_pred CCCeEEEEecCCCCEEEEEEEe
Q 045405 156 RALVHFQLNVGNEPATFIPIFN 177 (240)
Q Consensus 156 ~G~~H~~~N~G~~~a~~i~~~~ 177 (240)
++..|...|. +++.++++.+
T Consensus 320 ~~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 320 TWHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp TTCCEEEEEE--EEEEEEEEES
T ss_pred CCCeEEEEeC--CCEEEEEEcC
Confidence 9999999994 6677777643
No 72
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.08 E-value=4e-10 Score=102.74 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=67.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+.+....++||+..++|+|+ ..|++||++|+++++.+ +++ ...+++||++++|+|..|...|.|+++++++.+.
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v--~g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAV--DGE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEE--TTE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEE--CCE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 678999999999999999996 57999999999988544 355 6799999999999999999999999999998876
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
+
T Consensus 174 d 174 (354)
T 2d40_A 174 D 174 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 73
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.07 E-value=1.4e-09 Score=81.22 Aligned_cols=79 Identities=13% Similarity=0.198 Sum_probs=66.9
Q ss_pred EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeC-CCCCceecc---chhhcCCCCCCHHHHHhhcCCCHHHHHHH
Q 045405 141 FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNT-QNPGVSDSI---GTLFDTTPPVPNEVLTKSFRVGDDVINTI 216 (240)
Q Consensus 141 ~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s-~~Pg~~~~~---~~lf~s~~~~p~~vla~af~v~~~~v~~l 216 (240)
.+..+|++||+++||+|.+-...+.. .+.++++-++ +++....++ .++++ ++|.++++.+|+++.+++++|
T Consensus 5 ~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~---~l~~evla~aF~~s~ee~~~l 79 (93)
T 1dgw_Y 5 RYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDLTFPGSGEEVEEL 79 (93)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT---TSCHHHHHHHSSSCTHHHHHH
T ss_pred hhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH---hCCHHHHHHHcCCCHHHHHHH
Confidence 45789999999999999999999864 4999988544 488777775 58999 799999999999999999999
Q ss_pred HhhcCCCc
Q 045405 217 RAARAQSS 224 (240)
Q Consensus 217 ~~~~~~~~ 224 (240)
+..+....
T Consensus 80 ~~~q~e~~ 87 (93)
T 1dgw_Y 80 LENQKESY 87 (93)
T ss_dssp TTSCCCCS
T ss_pred HhcCCCce
Confidence 98875443
No 74
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.06 E-value=7.8e-10 Score=100.57 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=64.3
Q ss_pred ceEEEEEEEcCCcc-cC--CccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 97 GVALFRIDLDVGGI-NP--PHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 97 gls~~~v~l~pGg~-~~--pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
.+.+. ..+.|++. .+ +|||++..|++||++|++++.+.+.+|+...+.|++||++++|+|.+|.+.|.++++ +++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 46666 45556554 55 899987899999999999999876445334789999999999999999999998775 777
Q ss_pred EEEeC
Q 045405 174 PIFNT 178 (240)
Q Consensus 174 ~~~~s 178 (240)
.++..
T Consensus 125 ~v~~p 129 (350)
T 1juh_A 125 GVIVP 129 (350)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 76654
No 75
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.05 E-value=2.1e-09 Score=95.66 Aligned_cols=74 Identities=16% Similarity=0.145 Sum_probs=62.5
Q ss_pred EEEEEEcC-CcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeC
Q 045405 100 LFRIDLDV-GGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNT 178 (240)
Q Consensus 100 ~~~v~l~p-Gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s 178 (240)
...+.+.| |...++|||+...|++||++|++++.+ +++ ++.+++||++++|++..|++.|.++ ++.++.+++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i---~~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT---DGQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 44556666 567889999867999999999999987 355 6899999999999999999999998 8988888754
Q ss_pred C
Q 045405 179 Q 179 (240)
Q Consensus 179 ~ 179 (240)
.
T Consensus 293 ~ 293 (337)
T 1y3t_A 293 G 293 (337)
T ss_dssp S
T ss_pred c
Confidence 4
No 76
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.05 E-value=8.1e-10 Score=85.68 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=61.1
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+++..++++||+.. |||...+|++||++|++++.+ +|+ ...|++||++++|+|..|.+.|.+ ++++++.+.
T Consensus 39 ~~~~~~~~~~pG~~~--~~H~~~~E~~~Vl~G~~~~~~---~g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQSL--TETMAVDDVMIVLEGRLSVST---DGE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCEE--EEECSSEEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCCc--CccCCCCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEE
Confidence 588899999999865 455567999999999999987 366 679999999999999999998875 567776655
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
.
T Consensus 111 ~ 111 (119)
T 3lwc_A 111 Y 111 (119)
T ss_dssp E
T ss_pred C
Confidence 4
No 77
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.05 E-value=2.4e-09 Score=92.65 Aligned_cols=77 Identities=12% Similarity=0.140 Sum_probs=67.4
Q ss_pred ccceEEEEEEEcCCcccCC-ccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 95 TQGVALFRIDLDVGGINPP-HTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
...+.+.+++++||+..+. |.| ...|.+||++|++.+.+ +++ ++.|++||+++++.+..|+++|.|+++++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h-~~ee~~~vLeG~~~~~~---~~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVH-YMEHGLLMLEGEGLYKL---EEN--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCC-SSCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCC-CceEEEEEEECEEEEEE---CCE--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 4578999999999999886 556 56899999999999887 466 6799999999999999999999999999888
Q ss_pred EEEe
Q 045405 174 PIFN 177 (240)
Q Consensus 174 ~~~~ 177 (240)
.+-+
T Consensus 236 ~~kd 239 (246)
T 1sfn_A 236 LYKD 239 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 78
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.03 E-value=5.9e-10 Score=83.56 Aligned_cols=68 Identities=16% Similarity=0.260 Sum_probs=53.0
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
..++.+.||. .++|+|+...|++||++|++++.+.+ ++ .+.+++||++++|+|..|.+.|. +++.++.
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~ 97 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFAD--GG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVL 97 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETT--SC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECC--Cc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEE
Confidence 4456677887 46999987699999999999998732 15 67999999999999999999995 3455553
No 79
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.02 E-value=9.8e-10 Score=95.58 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=66.7
Q ss_pred cceEEEEEEEcCCcccCCccC-CCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTH-PRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~H-p~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
..+.+.+++++||+....|.| +...|++||++|++++.+ +++ ++.|++||.+++|++..|.+.|.|+++++++.
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~ 131 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA---EGK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFL 131 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 357889999999998766554 566899999999999987 356 68999999999999999999999999999988
Q ss_pred EEe
Q 045405 175 IFN 177 (240)
Q Consensus 175 ~~~ 177 (240)
+..
T Consensus 132 v~~ 134 (261)
T 1rc6_A 132 YKR 134 (261)
T ss_dssp EEE
T ss_pred EEe
Confidence 774
No 80
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.02 E-value=1.1e-09 Score=94.49 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=64.7
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEE-eCCCCeEEEEecCCCCEEEEEEE
Q 045405 98 VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFL-IPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v-~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
..+.+..++||...++|||+ ..|++||++|++++.+ +++ ...+++||.++ +|+|..|.+.|.++++++++.+.
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~ 107 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTV---GDV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIK 107 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEE---CCE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEe
Confidence 35667789999999999997 5999999999999987 355 67999999985 99999999999999999988765
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
.
T Consensus 108 r 108 (243)
T 3h7j_A 108 R 108 (243)
T ss_dssp E
T ss_pred c
Confidence 3
No 81
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.01 E-value=4e-09 Score=85.89 Aligned_cols=97 Identities=20% Similarity=0.090 Sum_probs=69.7
Q ss_pred ecCCCCCccCcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEee--CEEEEEEEccCCeEEEE
Q 045405 67 DFSKDPTTFDVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTR--GTVLVGLVTTNNTFFSK 144 (240)
Q Consensus 67 ~l~~~~~~~~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~--G~~~v~~v~~~g~~~~~ 144 (240)
.+..-+....+.|...+..... ....+++.++.+. +..++|||+...|++||++ |++++.+ +|+ .+
T Consensus 21 ~~~ei~~~~~~~G~srR~l~~~-----~~fp~sv~~v~~g--~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dge--~~ 88 (157)
T 4h7l_A 21 SLSEIEAVACPCGWAQRAFGHD-----AGTSVSVHYTQIT--KAARTHYHREHQEIYVVLDHAAHATIEL---NGQ--SY 88 (157)
T ss_dssp ETTTSCCEEETTEEEEEESCGG-----GCCSCEEEEEEEC--SCCCCBBCSSCEEEEEEEEECTTCEEEE---TTE--EE
T ss_pred EhhhCCCccCCCCeeeEEeEcC-----CCCcEEEEEEeCC--CCccceECCCCcEEEEEEecCcEEEEEE---CCE--EE
Confidence 5555554445555554433221 1223455655554 4568999988889999999 9999987 366 67
Q ss_pred EECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCC
Q 045405 145 VLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQ 179 (240)
Q Consensus 145 ~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~ 179 (240)
.+++||++++|+|..|++.+ ++++++++...
T Consensus 89 ~l~~GD~v~IPpg~~H~i~g----~l~~L~I~~Pp 119 (157)
T 4h7l_A 89 PLTKLLAISIPPLVRHRIVG----EATIINIVSPP 119 (157)
T ss_dssp ECCTTEEEEECTTCCEEEES----CEEEEEEEESS
T ss_pred EeCCCCEEEECCCCeEeeEC----CEEEEEEECCC
Confidence 99999999999999999973 68888887643
No 82
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.00 E-value=1.1e-09 Score=96.56 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=66.6
Q ss_pred cceEEEEEEEcCCccc--CCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 96 QGVALFRIDLDVGGIN--PPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~--~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
..+.+.+++++||+.. +.|.|+ ..|++||++|++++.+. ++ ++.|++||.+++|+|..|.+.|.|+++++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~---g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQ---GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEES---SC--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 4689999999999876 557785 69999999999999884 45 6799999999999999999999999999988
Q ss_pred EEEe
Q 045405 174 PIFN 177 (240)
Q Consensus 174 ~~~~ 177 (240)
.+..
T Consensus 140 ~v~~ 143 (278)
T 1sq4_A 140 WIRK 143 (278)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7764
No 83
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.99 E-value=2.2e-09 Score=81.92 Aligned_cols=76 Identities=20% Similarity=0.326 Sum_probs=58.3
Q ss_pred cceEEEEEEEcCCcccCCc--cCCCCCeEEEEeeCEEEEEEEccCCeEEE--EEECCCCEEEeCCCCeEEEEecCCC-CE
Q 045405 96 QGVALFRIDLDVGGINPPH--THPRGTEAGIVTRGTVLVGLVTTNNTFFS--KVLTPGKVFLIPRALVHFQLNVGNE-PA 170 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH--~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~--~~l~~GDv~v~P~G~~H~~~N~G~~-~a 170 (240)
.++.+.++. .+|...+++ +|....|++||++|++++.+. ++ . ..|++||.+++|+|..|.+.|.+++ ++
T Consensus 29 ~~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~---~~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~ 102 (112)
T 2opk_A 29 KGLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIECE---GD--TAPRVMRPGDWLHVPAHCRHRVAWTDGGEPT 102 (112)
T ss_dssp TTEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEET---TC--SSCEEECTTEEEEECTTCCEEEEEECSSSCE
T ss_pred CCEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEEC---CE--EEEEEECCCCEEEECCCCcEEEEeCCCCCCE
Confidence 356676664 456555552 343568999999999999884 33 4 7899999999999999999999976 67
Q ss_pred EEEEEEe
Q 045405 171 TFIPIFN 177 (240)
Q Consensus 171 ~~i~~~~ 177 (240)
++++++.
T Consensus 103 ~~l~v~~ 109 (112)
T 2opk_A 103 VWLAVHC 109 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777664
No 84
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.97 E-value=1.5e-09 Score=85.82 Aligned_cols=71 Identities=15% Similarity=0.077 Sum_probs=59.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+++.++.++|| ..|||....|++||++|++++.+ +|+ .+.|++||++++|+|..|.+.|. ++++++.++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~---~g~--~~~l~~GD~i~~p~g~~h~~~~~--~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRH---EGE--TMIAKAGDVMFIPKGSSIEFGTP--TSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEE---CCE--EEEECCCcEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 578889999999 45677667999999999999987 366 57999999999999999999884 567777766
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
.
T Consensus 126 ~ 126 (133)
T 2pyt_A 126 W 126 (133)
T ss_dssp E
T ss_pred c
Confidence 4
No 85
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.96 E-value=3.7e-09 Score=97.75 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=69.7
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEe-cCCCCEEEE
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLN-VGNEPATFI 173 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N-~G~~~a~~i 173 (240)
+..+.+....+.||+..++|.|.. .|+.||++|++....+ +|+ ...+++||++++|.|..|...| .|+++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 346889999999999999999965 6999999999976454 466 6799999999999999999999 999999999
Q ss_pred EEEeC
Q 045405 174 PIFNT 178 (240)
Q Consensus 174 ~~~~s 178 (240)
++++.
T Consensus 195 ~v~d~ 199 (394)
T 3bu7_A 195 DGLDI 199 (394)
T ss_dssp EEECH
T ss_pred Ecccc
Confidence 87753
No 86
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.96 E-value=1.8e-09 Score=79.40 Aligned_cols=53 Identities=25% Similarity=0.392 Sum_probs=46.5
Q ss_pred cccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecC
Q 045405 109 GINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVG 166 (240)
Q Consensus 109 g~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G 166 (240)
+..++|+|+...|++||++|++++.+. ++ ...+++||++++|+|..|...|.+
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFR---DQ--NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEEC---CE--EEEEcCCCEEEECCCCeEeeEcCC
Confidence 458899998769999999999998863 44 678999999999999999999974
No 87
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.95 E-value=1.1e-08 Score=94.53 Aligned_cols=93 Identities=12% Similarity=0.023 Sum_probs=74.3
Q ss_pred CCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCC
Q 045405 78 FKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRA 157 (240)
Q Consensus 78 ~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G 157 (240)
.|..+..++..+- +-....+.+....++||+..++|.|.. .|++||++|++++.+ +|+ ...+++||++++|+|
T Consensus 275 ~~~~l~l~nP~~g-~~~~~tl~~~~~~l~PG~~~~~HrH~~-~~v~~VleG~G~~~V---~ge--~~~~~~GD~~~iP~g 347 (394)
T 3bu7_A 275 DGLILRYTNPQTG-GHPMLTMGASMQMLRPGEHTKAHRHTG-NVIYNVAKGQGYSIV---GGK--RFDWSEHDIFCVPAW 347 (394)
T ss_dssp TBEEEEECCTTTS-SCSSSSCEEEEEEECTTCBCCCEEESS-CEEEEEEECCEEEEE---TTE--EEEECTTCEEEECTT
T ss_pred CceEEEEeCCCCC-CCCCCeeeEEEEEECCCCcCCCcccCC-cEEEEEEeCeEEEEE---CCE--EEEEeCCCEEEECCC
Confidence 4455555554432 212335788999999999999999974 799999999998776 466 689999999999999
Q ss_pred CeEEEEecC-CCCEEEEEEEe
Q 045405 158 LVHFQLNVG-NEPATFIPIFN 177 (240)
Q Consensus 158 ~~H~~~N~G-~~~a~~i~~~~ 177 (240)
..|...|.| ++++.++++.+
T Consensus 348 ~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 348 TWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp CCEEEEECCSSCCEEEEEEES
T ss_pred CeEEeEeCCCCCCeEEEEeeC
Confidence 999999998 78988887653
No 88
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.95 E-value=2.7e-09 Score=91.15 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=62.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+++.++.++||+..++|+|+ ..|++||++|++++.+ +++ ++.+++||.+++|+|..|++.|. .+++.++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i---~g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYV---DGK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 578899999999999999997 4899999999999987 355 68999999999999999999993 4566665543
No 89
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.95 E-value=2.3e-09 Score=98.30 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=68.8
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
-.+.+....+.||+..++|.|. ..|+.||++|++....+ +|+ ...+++||++++|.|..|...|.|+++++++.+
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~v--dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v 175 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVV--NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDG 175 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEE--TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEE--CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEe
Confidence 4688999999999999999996 47999999999953344 466 679999999999999999999999999999988
Q ss_pred EeC
Q 045405 176 FNT 178 (240)
Q Consensus 176 ~~s 178 (240)
++.
T Consensus 176 ~D~ 178 (368)
T 3nw4_A 176 LDI 178 (368)
T ss_dssp ECH
T ss_pred cch
Confidence 864
No 90
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.94 E-value=1.3e-08 Score=89.56 Aligned_cols=76 Identities=11% Similarity=0.192 Sum_probs=66.9
Q ss_pred ccceEEEEEEEcCCcccCC-ccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 95 TQGVALFRIDLDVGGINPP-HTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
...+.+.+++++||+..+. |.|. .+|.+||++|++.+.+ +++ ++.+++||+++++++..|+++|.|++++++|
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l---~~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRL---GDN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 4468899999999999986 7785 5899999999999887 355 7899999999999999999999999999987
Q ss_pred EEE
Q 045405 174 PIF 176 (240)
Q Consensus 174 ~~~ 176 (240)
..-
T Consensus 257 ~yk 259 (266)
T 4e2q_A 257 LYK 259 (266)
T ss_dssp EEE
T ss_pred EEc
Confidence 543
No 91
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.94 E-value=4.6e-09 Score=92.61 Aligned_cols=82 Identities=13% Similarity=0.133 Sum_probs=70.4
Q ss_pred CCCCccceEEEEEEEcCCcccCC-ccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCC
Q 045405 91 PAVNTQGVALFRIDLDVGGINPP-HTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEP 169 (240)
Q Consensus 91 P~l~~~gls~~~v~l~pGg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (240)
|.-....+.+.+++++||+..+. |.| ..+|.+||++|++.+.+ +|+ ++.|++||+++++.+..|+++|.|+++
T Consensus 184 p~~~~~~~~~~~~~l~pG~~i~~~~~h-~~e~~~~il~G~~~~~~---~~~--~~~v~~GD~~~~~~~~~h~~~n~g~~~ 257 (278)
T 1sq4_A 184 MSDMRHDMHVNIVNFEPGGVIPFAETH-VMEHGLYVLEGKAVYRL---NQD--WVEVEAGDFMWLRAFCPQACYSGGPGR 257 (278)
T ss_dssp TTCTTCSEEEEEEEECSSSEESCCCCC-SEEEEEEEEECEEEEEE---TTE--EEEEETTCEEEEEESCCEEEECCSSSC
T ss_pred CCCcCCCeEEEEEEECCCCCcCCCCCC-CccEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCCEEEEcCCCCC
Confidence 43334578999999999999886 556 55899999999999886 466 789999999999999999999999999
Q ss_pred EEEEEEEeC
Q 045405 170 ATFIPIFNT 178 (240)
Q Consensus 170 a~~i~~~~s 178 (240)
++++.+.+-
T Consensus 258 ~~yl~~~d~ 266 (278)
T 1sq4_A 258 FRYLLYKDV 266 (278)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 999988864
No 92
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.94 E-value=2e-09 Score=94.34 Aligned_cols=77 Identities=9% Similarity=0.005 Sum_probs=66.1
Q ss_pred cceEEEEEEEcCCcccCCcc-CCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHT-HPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~-Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
..+.+.+++++||+....|. |+...|++||++|++++.+. ++ ++.|++||.+++|++.+|.+.|.|+++++++.
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~---~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~ 134 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDG---QE--THELEAGGYAYFTPEMKMYLANAQEADTEVFL 134 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 35789999999999766554 45668999999999999873 55 67999999999999999999999999999988
Q ss_pred EEe
Q 045405 175 IFN 177 (240)
Q Consensus 175 ~~~ 177 (240)
+..
T Consensus 135 v~~ 137 (274)
T 1sef_A 135 YKK 137 (274)
T ss_dssp EEE
T ss_pred EEe
Confidence 774
No 93
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.90 E-value=5.9e-09 Score=88.99 Aligned_cols=73 Identities=11% Similarity=-0.037 Sum_probs=64.1
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++.+.++.++||...++|.||. +|++||++|++++.+. |+ +..+++||++++|+|.+|.+.|. ++++++.++
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i~---~~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i~ 107 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFIE---NN--KKTISNGDFLEITANHNYSIEAR--DNLKLIEIG 107 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEES---SC--EEEEETTEEEEECSSCCEEEEES--SSEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEEC--CCcEEEEEE
Confidence 5788999999999999999975 9999999999999984 45 68999999999999999999985 467887765
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
.
T Consensus 108 ~ 108 (227)
T 3rns_A 108 E 108 (227)
T ss_dssp E
T ss_pred e
Confidence 4
No 94
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.88 E-value=1.9e-08 Score=84.37 Aligned_cols=84 Identities=12% Similarity=0.138 Sum_probs=67.0
Q ss_pred EEEEEEEcCCc----------ccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCC
Q 045405 99 ALFRIDLDVGG----------INPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNE 168 (240)
Q Consensus 99 s~~~v~l~pGg----------~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~ 168 (240)
+...+.+.|+. ..++|+|+. .|+.||++|++.+.+.+.+++.+...+++||++++|+|..|+..+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 45566677765 248899986 8999999999999998655666667999999999999999999987777
Q ss_pred CEEEEEEEeCCCCCce
Q 045405 169 PATFIPIFNTQNPGVS 184 (240)
Q Consensus 169 ~a~~i~~~~s~~Pg~~ 184 (240)
....+-+|. ..|+..
T Consensus 154 ~~~airlF~-~~~~W~ 168 (191)
T 1vr3_A 154 YVKAMRLFV-GEPVWT 168 (191)
T ss_dssp CEEEEEEES-SSCCCC
T ss_pred CEEEEEEEC-CCCCcc
Confidence 777777775 345554
No 95
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.88 E-value=8e-09 Score=88.02 Aligned_cols=77 Identities=22% Similarity=0.169 Sum_probs=67.0
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
...+.+.++.++||...|.|.|+ .+|+.||++|++++.+. +++ +..+++||++++|.|..|++. ++++|+..+.
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~--~g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePllalw 202 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLR--NAP--DLMLEPGQTRFHPANAPHAMT-TLTDPILTLV 202 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEET--TSC--CEEECTTCEEEECTTCCEEEE-CCSSCEEEEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEEC--CCC--EEecCCCCEEEcCCCCceeEE-ECCccEEEEE
Confidence 34689999999999999999997 59999999999999874 244 679999999999999999998 5889998776
Q ss_pred EEe
Q 045405 175 IFN 177 (240)
Q Consensus 175 ~~~ 177 (240)
+..
T Consensus 203 vW~ 205 (217)
T 4b29_A 203 LWR 205 (217)
T ss_dssp EEE
T ss_pred EEe
Confidence 664
No 96
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.84 E-value=1.1e-08 Score=82.82 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=57.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+++..++++ ++- .|||...+|+.||++|++++.+ +|+ ...+++||+++||+|..|.+.|. ++++++.+.
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i---~g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIII---DGR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 4667777776 443 4677778999999999999986 466 68999999999999999999997 578877776
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
.
T Consensus 135 ~ 135 (151)
T 4axo_A 135 Y 135 (151)
T ss_dssp E
T ss_pred C
Confidence 5
No 97
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.77 E-value=1.8e-08 Score=88.56 Aligned_cols=75 Identities=17% Similarity=0.121 Sum_probs=63.8
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
..+.+.+++++||+..+.|.| ..+|++||++|++++.+.+ |+ ++.|++||.+++|++..|.+.|. ++++++.+
T Consensus 68 ~~f~~~lv~l~PGg~s~~~~h-~~EEfiyVleG~l~l~l~~--g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V 140 (266)
T 4e2q_A 68 SHFVMYLAKMKEMSSSGLPPQ-DIERLIFVVEGAVTLTNTS--SS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVF 140 (266)
T ss_dssp CSSEEEEEEECSSEECCCCCT-TEEEEEEEEEECEEEEC----CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEE
T ss_pred CcEEEEEEEECcCCcCCCCCC-CCeEEEEEEEEEEEEEECC--Cc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEE
Confidence 368899999999998888867 5799999999999998741 44 67999999999999999999995 67888876
Q ss_pred Ee
Q 045405 176 FN 177 (240)
Q Consensus 176 ~~ 177 (240)
..
T Consensus 141 ~k 142 (266)
T 4e2q_A 141 ER 142 (266)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 98
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.71 E-value=6.4e-08 Score=78.82 Aligned_cols=74 Identities=16% Similarity=0.128 Sum_probs=62.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEec--CCCCEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNV--GNEPATFIP 174 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~--G~~~a~~i~ 174 (240)
+..+.+++++||+..++|.|+. .|.+|||+|+... ++++ .++++||.++.|.|..|...+. ++++++++.
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~---~e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRY---KEHD----WVAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEE---TTSS----CCBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE---eCCC----eEECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 5678899999999999999986 8999999999874 2333 3789999999999999999998 778888887
Q ss_pred EEeC
Q 045405 175 IFNT 178 (240)
Q Consensus 175 ~~~s 178 (240)
+.+.
T Consensus 113 ~~~G 116 (159)
T 3ebr_A 113 IVAG 116 (159)
T ss_dssp EEES
T ss_pred EecC
Confidence 6553
No 99
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.68 E-value=3.3e-08 Score=74.49 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=49.8
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCE
Q 045405 102 RIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPA 170 (240)
Q Consensus 102 ~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (240)
...+.||.. +.| |+ ..|++||++|++++.+. +++ ...|++||++++|+|..|.+.|.++...
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~--~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTE--DGK--KYVIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEET--TCC--EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEEC--CCC--EEEECCCCEEEECCCCcEEEEeCCCeeE
Confidence 567788764 345 64 69999999999999873 145 6799999999999999999999775433
No 100
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.66 E-value=3.3e-08 Score=77.12 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=54.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCC
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEP 169 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (240)
.+++..+.+.||... .|+|.. .|++||++|++++.+ ++|+ ..+|++||++++|+|..|.+.|.++..
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~--~~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVD--PDGT--VHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEEC--TTCC--EEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEE--CCCe--EEEECCCCEEEECCCCeEEEEECCcee
Confidence 478888899998754 466642 899999999999886 2455 579999999999999999999986543
No 101
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.66 E-value=5.3e-08 Score=81.66 Aligned_cols=70 Identities=14% Similarity=0.149 Sum_probs=60.2
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEe
Q 045405 98 VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFN 177 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~ 177 (240)
..+..++++||+..+.|+|+. .|++||++|+.. ++. .++.+||.+++|.|..|...+.+++.++++++++
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g-~E~~~VL~G~f~----de~-----~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRG-LELTLVLQGAFR----DET-----DRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSS-CEEEEEEESEEE----CSS-----SEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred cEEEEEEECCCCCCCCcCCCC-eEEEEEEEEEEE----CCc-----EEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 466899999999999999964 899999999954 332 3689999999999999999997788899888765
No 102
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.65 E-value=1.5e-08 Score=84.24 Aligned_cols=70 Identities=21% Similarity=0.246 Sum_probs=56.1
Q ss_pred cCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCc
Q 045405 111 NPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGV 183 (240)
Q Consensus 111 ~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~ 183 (240)
.++|+|+. .|+.||++|++.+.+. .+++.+...+++||++++|+|..|+..+..+.....+-+|... |+.
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECCh-heEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 57899986 8999999999998875 3466566789999999999999999987666566667666533 554
No 103
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.62 E-value=8.7e-08 Score=82.74 Aligned_cols=71 Identities=14% Similarity=0.125 Sum_probs=61.0
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.+.+.+++++||+....|+ .+|++||++|++++.+. ++ ++.|++||.+++|++..|.+.|. +++.++.+.
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v~ 118 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVG---GE--TRTLREYDYVYLPAGEKHMLTAK--TDARVSVFE 118 (246)
T ss_dssp SSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECS---SC--EEEECTTEEEEECTTCCCEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 5788999999999877774 68999999999999873 55 68999999999999999999998 667777665
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
.
T Consensus 119 ~ 119 (246)
T 1sfn_A 119 K 119 (246)
T ss_dssp E
T ss_pred e
Confidence 3
No 104
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.55 E-value=3.8e-07 Score=82.75 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=63.0
Q ss_pred CCCccceEEEEEEEcC---CcccCCccCCCCCeEEEEeeCEEEEEEEccCC-eEEEEEECCCCEEEeCCCCeEEEEecCC
Q 045405 92 AVNTQGVALFRIDLDV---GGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-TFFSKVLTPGKVFLIPRALVHFQLNVGN 167 (240)
Q Consensus 92 ~l~~~gls~~~v~l~p---Gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-~~~~~~l~~GDv~v~P~G~~H~~~N~G~ 167 (240)
..+...+++.++++.+ |+..+.|.|+. +|++||++|++++.+. | + .++|++||++++|+|.+|.+.|.++
T Consensus 243 ~~~~~~f~~~~i~~~~~~~g~~~~~h~~~~-~~~~~vleG~~~i~i~---g~~--~~~l~~Gd~~~iPag~~h~~~~~~~ 316 (350)
T 1juh_A 243 QAQDTNYTLSTISMSTTPSTVTVPTWSFPG-ACAFQVQEGRVVVQIG---DYA--ATELGSGDVAFIPGGVEFKYYSEAY 316 (350)
T ss_dssp HHGGGCEEEEEEEECCCCTTSCCCCBCCSS-CEEEEEEESCEEEEET---TSC--CEEECTTCEEEECTTCCEEEEESSS
T ss_pred cCceeEEEEEEEeeccccCCCCCCcccCCC-cEEEEEEeeEEEEEEC---CeE--EEEeCCCCEEEECCCCCEEEEecCC
Confidence 3344357888888888 34678888965 9999999999999984 4 4 6799999999999999999999765
Q ss_pred CCEEEEEEEe
Q 045405 168 EPATFIPIFN 177 (240)
Q Consensus 168 ~~a~~i~~~~ 177 (240)
. +.++.+.+
T Consensus 317 ~-~~~l~~~~ 325 (350)
T 1juh_A 317 F-SKVLFVSS 325 (350)
T ss_dssp S-EEEEEEEE
T ss_pred e-EEEEEEec
Confidence 4 66665554
No 105
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.53 E-value=4.4e-07 Score=75.03 Aligned_cols=78 Identities=23% Similarity=0.276 Sum_probs=61.3
Q ss_pred eEEEEEEEcCCcccCCccCCC------CCeEEEEeeCEEEEEEEccCCeE------------------EEEEECCCCEEE
Q 045405 98 VALFRIDLDVGGINPPHTHPR------GTEAGIVTRGTVLVGLVTTNNTF------------------FSKVLTPGKVFL 153 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~------a~Ei~yVl~G~~~v~~v~~~g~~------------------~~~~l~~GDv~v 153 (240)
-..-++.+.||+..|.|+|+. -.|-++|+.|++++.+.+ ++. ...+|++||.+.
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g--~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvt 130 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEG--EKTPLPKVLPPQEDREHYTVWHEIELEPGGQYT 130 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESS--SCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEE
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECC--ccccCcceeccCCceeeecCCcEEEECCCCEEE
Confidence 566789999999999999998 899999999999887732 221 246999999999
Q ss_pred eCCCCeEEEEecCCCCEEEEEEEeCC
Q 045405 154 IPRALVHFQLNVGNEPATFIPIFNTQ 179 (240)
Q Consensus 154 ~P~G~~H~~~N~G~~~a~~i~~~~s~ 179 (240)
+|+|..|++.| |.+.++ +.-+++.
T Consensus 131 Ippg~~H~f~a-geegvl-i~EvSt~ 154 (175)
T 2y0o_A 131 IPPNTKHWFQA-GEEGAV-VTEMSST 154 (175)
T ss_dssp ECTTCCEEEEE-EEEEEE-EEEEEEC
T ss_pred ECCCCcEEEEe-CCCCEE-EEEEeCC
Confidence 99999999999 434444 4444443
No 106
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.51 E-value=5.5e-08 Score=77.70 Aligned_cols=76 Identities=14% Similarity=-0.007 Sum_probs=58.0
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeE-EEEEECCCCEEEeCCCCeEE-EEecCCCCEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTF-FSKVLTPGKVFLIPRALVHF-QLNVGNEPATFIP 174 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~-~~~~l~~GDv~v~P~G~~H~-~~N~G~~~a~~i~ 174 (240)
|-.+.+++++||+..++|+|+. .|.+|||+|++... .+.. ....+++||.+++|.|..|. ..+ .+.++++.
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~----~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l~ 115 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVR----GGKAAGGDTAIAPGYGYESANARHDKTEF--PVASEFYM 115 (145)
T ss_dssp TEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEET----TCGGGTSEEEESSEEEEECTTCEESCCEE--EEEEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEc----CCCEecceEeCCCEEEEECcCCccCCeEC--CCCeEEEE
Confidence 3457789999999999999986 67799999999853 2321 02689999999999999999 443 34466776
Q ss_pred EEeCC
Q 045405 175 IFNTQ 179 (240)
Q Consensus 175 ~~~s~ 179 (240)
+++..
T Consensus 116 ~~~gp 120 (145)
T 2o1q_A 116 SFLGP 120 (145)
T ss_dssp EEESC
T ss_pred EECCc
Confidence 67644
No 107
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.51 E-value=1.7e-06 Score=71.15 Aligned_cols=85 Identities=14% Similarity=0.239 Sum_probs=71.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEcc-CCe---EEEEEECCCCEEEeCCCCeEEEEecCCCCEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTT-NNT---FFSKVLTPGKVFLIPRALVHFQLNVGNEPATF 172 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~-~g~---~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (240)
++++..+...||...++|-|.++..+++|++|+++..+... +++ ..+..+++||++++|++.+|.+.|.++++++-
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 57889999999999999999887889999999999876532 232 13578999999999999999999999999999
Q ss_pred EEEEeCCCC
Q 045405 173 IPIFNTQNP 181 (240)
Q Consensus 173 i~~~~s~~P 181 (240)
|-++..+..
T Consensus 148 lHvY~pp~~ 156 (171)
T 3eqe_A 148 LHVYSPPLE 156 (171)
T ss_dssp EEEEESCCC
T ss_pred EEEeCCCcc
Confidence 988875543
No 108
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.48 E-value=2.1e-07 Score=76.30 Aligned_cols=74 Identities=18% Similarity=0.164 Sum_probs=59.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecC--CCCEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVG--NEPATFIP 174 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G--~~~a~~i~ 174 (240)
+..+.+++++||+..++|+|+. .|.+|||+|++... . +. ...+++||.++.|.|..|...+.. +++++.+.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~---~-~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT---E-YP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET---T-CT--TSCEETTEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC---C-Cc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 5678899999999999999976 89999999998752 2 21 246789999999999999998854 33776666
Q ss_pred EEe
Q 045405 175 IFN 177 (240)
Q Consensus 175 ~~~ 177 (240)
+.+
T Consensus 115 v~~ 117 (165)
T 3cjx_A 115 MLS 117 (165)
T ss_dssp EEE
T ss_pred EEe
Confidence 555
No 109
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.48 E-value=1.2e-06 Score=71.96 Aligned_cols=60 Identities=20% Similarity=0.151 Sum_probs=51.1
Q ss_pred EcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecC
Q 045405 105 LDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVG 166 (240)
Q Consensus 105 l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G 166 (240)
-.|++....|.|+ .+|++||++|++++.+.+. |+.....|++||++++|+|+.|.-...+
T Consensus 42 ~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 42 GGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CSCBCCCCEEECS-SCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4566778899884 6999999999999999874 6555789999999999999999987654
No 110
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.43 E-value=2.6e-06 Score=77.94 Aligned_cols=88 Identities=15% Similarity=0.120 Sum_probs=70.7
Q ss_pred Cce-EEEeccc-CCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCC
Q 045405 79 KRA-VTFGDVF-GFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPR 156 (240)
Q Consensus 79 G~~-v~~~~~~-~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~ 156 (240)
|.. +..++.. .-+.+. -|++....|+||...++|-|. +.++++|++|++++.+ +++ +.+.++||+|++|.
T Consensus 260 g~~~~~y~NP~tg~~~~p--ti~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I---~~~--~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMP--TLRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVM---NGE--TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSS--SCEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcch--hHHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEE---CCE--EEEecCCCEEEECC
Confidence 665 6666654 233455 467778899999999999996 5799999999999988 355 67899999999999
Q ss_pred CCeEEEEecCCCCEEEEEEE
Q 045405 157 ALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 157 G~~H~~~N~G~~~a~~i~~~ 176 (240)
+..|...|. +++.++.+-
T Consensus 332 w~~h~~~n~--~~a~Lf~~~ 349 (368)
T 3nw4_A 332 WVPWSLQAE--TQFDLFRFS 349 (368)
T ss_dssp TCCEEEEES--SSEEEEEEE
T ss_pred CCcEEEEeC--CCEEEEEEe
Confidence 999999996 577776544
No 111
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.40 E-value=1.4e-06 Score=78.05 Aligned_cols=77 Identities=21% Similarity=0.135 Sum_probs=63.3
Q ss_pred EEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccC-CeEEEEEECC-C---CEEEeCCCCeEEEEecCCCCEEEE
Q 045405 99 ALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTN-NTFFSKVLTP-G---KVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 99 s~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-g~~~~~~l~~-G---Dv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
.....++.||.....|||....|.++|++|++++.+.++. ++ ...++. | +++++|+|..|.+.|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 3456678999999999999999999999999998776543 45 344544 6 999999999999999998999887
Q ss_pred EEEe
Q 045405 174 PIFN 177 (240)
Q Consensus 174 ~~~~ 177 (240)
..-+
T Consensus 351 ~~~~ 354 (369)
T 3st7_A 351 MWVN 354 (369)
T ss_dssp EEES
T ss_pred EecC
Confidence 6543
No 112
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.36 E-value=9.6e-07 Score=70.17 Aligned_cols=60 Identities=17% Similarity=0.291 Sum_probs=49.0
Q ss_pred CcccCCccCCCCCeEEEEeeCEEEEEEEccC-C--eEEEEEECCCCEEEeCCCCeEEEEecCC
Q 045405 108 GGINPPHTHPRGTEAGIVTRGTVLVGLVTTN-N--TFFSKVLTPGKVFLIPRALVHFQLNVGN 167 (240)
Q Consensus 108 Gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-g--~~~~~~l~~GDv~v~P~G~~H~~~N~G~ 167 (240)
+++..+|.|++.+|+++|++|++++.+-+.. + +.....+++|++++||+|+.|......+
T Consensus 39 ~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e 101 (140)
T 3d0j_A 39 EGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKD 101 (140)
T ss_dssp TTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTT
T ss_pred ccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCc
Confidence 3567789999999999999999999987421 1 2336799999999999999999887543
No 113
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.35 E-value=4.8e-06 Score=70.48 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=68.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEc--cCCeE----EEEEECCCCEEEeCC--CCeEEEEec-CC
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVT--TNNTF----FSKVLTPGKVFLIPR--ALVHFQLNV-GN 167 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~--~~g~~----~~~~l~~GDv~v~P~--G~~H~~~N~-G~ 167 (240)
.+.+..+...||...++|-|.. ..+++|++|+++..+.. .+|+. .+.++++||+++++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 4788899999999999999986 99999999999887753 22322 157899999999999 999999999 68
Q ss_pred CCEEEEEEEeC
Q 045405 168 EPATFIPIFNT 178 (240)
Q Consensus 168 ~~a~~i~~~~s 178 (240)
++++.|-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89998887743
No 114
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.22 E-value=1e-05 Score=63.60 Aligned_cols=58 Identities=19% Similarity=0.197 Sum_probs=47.7
Q ss_pred CCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCC-CCEEEEEE
Q 045405 112 PPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFIPI 175 (240)
Q Consensus 112 ~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~-~~a~~i~~ 175 (240)
.||.|+ .-|++||++|++++.+ +++ .+.+++||++++|+|.+|...+.++ ++...+.+
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKN---QGR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEE---CCE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 489995 5899999999999987 356 6799999999999999999888763 55555543
No 115
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.19 E-value=6.6e-06 Score=67.59 Aligned_cols=58 Identities=17% Similarity=0.313 Sum_probs=48.5
Q ss_pred cCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC----eEEEEEECCCCEEEeCCCCeEEEEec
Q 045405 106 DVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN----TFFSKVLTPGKVFLIPRALVHFQLNV 165 (240)
Q Consensus 106 ~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g----~~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (240)
.|+...-.|.| ..+|++|+++|++.+.+.+. | +.....+++||++++|+|..|.-...
T Consensus 42 GPn~r~D~H~~-~~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 42 GPNERTDYHIN-PTPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp SSBCCSCEEEC-SSCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred CCCcCCcCcCC-CCceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 34566788955 56999999999999999974 4 45578999999999999999998664
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.16 E-value=6.2e-06 Score=70.53 Aligned_cols=69 Identities=20% Similarity=0.117 Sum_probs=57.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
+..+.+++++||+..++|+|+. .|.+|||+|+.. +. ...+.+||.++.|.|..|.... ++.+++++.+
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk~ 109 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKL 109 (223)
T ss_dssp CEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEE----ET-----TEEEETTEEEEECTTCEECCEE--SSCEEEEEEE
T ss_pred ccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCCccccEe--CCCCEEEEEe
Confidence 4567789999999999999975 899999999975 33 2478999999999999998876 5668888776
Q ss_pred e
Q 045405 177 N 177 (240)
Q Consensus 177 ~ 177 (240)
.
T Consensus 110 ~ 110 (223)
T 3o14_A 110 W 110 (223)
T ss_dssp S
T ss_pred c
Confidence 4
No 117
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.12 E-value=4.5e-05 Score=64.11 Aligned_cols=85 Identities=16% Similarity=0.120 Sum_probs=70.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEcc--CC-----eEEEEEECCCCEEEe-CCCCeEEEEecC-C
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTT--NN-----TFFSKVLTPGKVFLI-PRALVHFQLNVG-N 167 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~--~g-----~~~~~~l~~GDv~v~-P~G~~H~~~N~G-~ 167 (240)
..++..+...||...++|=|.++..+++|++|+++....+- ++ ..-+.++++||+.++ |++.+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 47888899999999999999878999999999999887542 11 123679999999999 888899999998 7
Q ss_pred CCEEEEEEEeCCCC
Q 045405 168 EPATFIPIFNTQNP 181 (240)
Q Consensus 168 ~~a~~i~~~~s~~P 181 (240)
++++-|=++..+..
T Consensus 149 ~~avSlHvY~pp~~ 162 (200)
T 3eln_A 149 EPAVSLHLYSPPFD 162 (200)
T ss_dssp CCEEEEEEEESCCS
T ss_pred CCEEEEEeCCCCcc
Confidence 88888877765544
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.10 E-value=1e-05 Score=71.05 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=49.6
Q ss_pred CCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecC
Q 045405 107 VGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVG 166 (240)
Q Consensus 107 pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G 166 (240)
|+.-...| |+..+|++|+++|..++.+.+. |+.....+++||++++|+|+.|.-....
T Consensus 40 pN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~ 97 (286)
T 2qnk_A 40 PNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFA 97 (286)
T ss_dssp CBCCCCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred CCcCccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccC
Confidence 33347788 8889999999999999999974 6666789999999999999999987743
No 119
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.09 E-value=3.4e-06 Score=68.26 Aligned_cols=91 Identities=11% Similarity=-0.069 Sum_probs=63.8
Q ss_pred cCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCC
Q 045405 77 VFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPR 156 (240)
Q Consensus 77 ~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~ 156 (240)
..|...+.+... | ..|-...+++++||+.+++|+|+. .|.+|||+|+....-.+. .....+++|+.++.|+
T Consensus 30 ~~Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~~Gd~---~~~~~~~aGsYv~ePp 100 (153)
T 3bal_A 30 DGGITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVRGGEQ---EGGSTAYAPSYGFESS 100 (153)
T ss_dssp ESCCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEETTCGG---GTSEEEESSEEEEECT
T ss_pred CCCeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEecCccc---cCccccCCCeEEEcCC
Confidence 456666666222 2 136788899999999999999986 788999999987642211 0135788999999999
Q ss_pred CCeEEEEecCCCCEEEEEEEe
Q 045405 157 ALVHFQLNVGNEPATFIPIFN 177 (240)
Q Consensus 157 G~~H~~~N~G~~~a~~i~~~~ 177 (240)
|..|+.... ++..+++.+..
T Consensus 101 Gs~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 101 GALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp TCEESCCEE-SSCEEEEEEEE
T ss_pred CCcccceeC-CCCeEEEEEEE
Confidence 999985332 23344444443
No 120
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.80 E-value=0.00017 Score=62.15 Aligned_cols=76 Identities=18% Similarity=0.131 Sum_probs=56.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
++++..+.+ .|...... +| .+|+.||++|++++.. +|+ ..++++||+++||+|..|.+...+.. ..+++.+
T Consensus 46 ~~~~G~~~~-~g~~~v~~-~p-~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVEA-YP-YTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPES-LWAFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEESS-CS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTE-EEEEEEE
T ss_pred CeEEEEEEe-cccccccc-CC-CcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCe-EEEEEec
Confidence 678888888 66554322 22 2799999999999986 366 67899999999999999999886544 4455566
Q ss_pred e-CCCC
Q 045405 177 N-TQNP 181 (240)
Q Consensus 177 ~-s~~P 181 (240)
. ...|
T Consensus 117 ~~~~~p 122 (238)
T 3myx_A 117 TQASGP 122 (238)
T ss_dssp CSCCSC
T ss_pred cCCCCC
Confidence 6 3444
No 121
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.77 E-value=0.00019 Score=59.11 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=64.0
Q ss_pred EEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccC------CeEEEEEEC---CCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 103 IDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTN------NTFFSKVLT---PGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 103 v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~---~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
....+|.++..|+|..-.++++|++|++...++|-. |+.....|. ....+++|+|+.|.+.+.++++++++
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~l 137 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVA 137 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEE
Confidence 345788899999998889999999999999998743 355677787 66799999999999999998777776
Q ss_pred EEEeC-CCCCc
Q 045405 174 PIFNT-QNPGV 183 (240)
Q Consensus 174 ~~~~s-~~Pg~ 183 (240)
...+. -+|..
T Consensus 138 y~~s~~Y~p~~ 148 (174)
T 3ejk_A 138 NCTDIPHRQGE 148 (174)
T ss_dssp EEESSCCCTTS
T ss_pred EECCCccCCCC
Confidence 55443 24544
No 122
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.71 E-value=0.00067 Score=57.43 Aligned_cols=81 Identities=19% Similarity=0.166 Sum_probs=66.4
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEc--cCCeEE----EEEECCCCEEEeCCC--CeEEEEecC-C
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVT--TNNTFF----SKVLTPGKVFLIPRA--LVHFQLNVG-N 167 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~--~~g~~~----~~~l~~GDv~v~P~G--~~H~~~N~G-~ 167 (240)
.+++..+...||...++|=|. +.-++.|++|+.+..+.. .+|+.. ...+++||+.+++.+ .+|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 478889999999999999997 899999999999877643 234321 378999999999987 899999984 7
Q ss_pred CCEEEEEEEeC
Q 045405 168 EPATFIPIFNT 178 (240)
Q Consensus 168 ~~a~~i~~~~s 178 (240)
++++-|=++..
T Consensus 151 ~~avSLHvYg~ 161 (211)
T 3uss_A 151 RTSISIHVYGA 161 (211)
T ss_dssp SCEEEEEEESS
T ss_pred CCEEEEEEcCC
Confidence 88888877753
No 123
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.68 E-value=0.00019 Score=55.28 Aligned_cols=62 Identities=15% Similarity=0.091 Sum_probs=48.1
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEec
Q 045405 98 VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNV 165 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (240)
.........||...- +++ ..+|+.|||+|++++... +|+ ..++++||++++|+|....+.-.
T Consensus 42 ~~~GvWe~tPG~~~~-~~~-~~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 42 TIVAVWMAEPGIYNY-AGR-DLEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CEEEEEEECSEEEEE-CCC-SEEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEEecCCceeEC-eeC-CCcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEe
Confidence 556677899997542 333 235999999999998863 465 57999999999999999888654
No 124
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.64 E-value=0.0008 Score=53.49 Aligned_cols=96 Identities=11% Similarity=0.066 Sum_probs=66.5
Q ss_pred cCCceEEEecc-cCCCCCCccceEEE-EEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCC-EEE
Q 045405 77 VFKRAVTFGDV-FGFPAVNTQGVALF-RIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGK-VFL 153 (240)
Q Consensus 77 ~~G~~v~~~~~-~~~P~l~~~gls~~-~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GD-v~v 153 (240)
...|.++.+.. .+.|- .- -.++ ....+||....+|.|....|++++++|+..+.+.|.. ...+..|.+.. .+.
T Consensus 15 D~RG~L~~~e~~~~ipf-~i--kRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~-~~~~~~L~~~~~gL~ 90 (141)
T 2pa7_A 15 DSRGSLVAIEENKNIPF-SI--KRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGN-IIQEITLDSPAVGLY 90 (141)
T ss_dssp ETTEEEEEEETTTTSSS-CC--CEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSS-CEEEEEECCTTEEEE
T ss_pred cCCCcEEEEeccCCCCC-Cc--cEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCc-EEEEEEECCCCcEEE
Confidence 33556777655 33443 21 1233 3345688889999999999999999999999986532 23355665554 489
Q ss_pred eCCCCeEEEEecCCCCEEEEEEEe
Q 045405 154 IPRALVHFQLNVGNEPATFIPIFN 177 (240)
Q Consensus 154 ~P~G~~H~~~N~G~~~a~~i~~~~ 177 (240)
+|+|+.|.+.+.++. ++++.+-+
T Consensus 91 IppgvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 91 VGPAVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp ECTTCEEEEECCCTT-CEEEEEES
T ss_pred eCCCEEEEEEEcCCC-eEEEEECC
Confidence 999999999998875 66665443
No 125
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.52 E-value=0.0019 Score=52.91 Aligned_cols=132 Identities=13% Similarity=0.102 Sum_probs=86.4
Q ss_pred CcCCceEEEecccCCC-CCCccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEE-EEEEEccCCeEEEEE----ECCC
Q 045405 76 DVFKRAVTFGDVFGFP-AVNTQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTV-LVGLVTTNNTFFSKV----LTPG 149 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P-~l~~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~-~v~~v~~~g~~~~~~----l~~G 149 (240)
.+.||+.++.....-+ .-.....+....-|.+|....+|.. +++|+.|...|.. ++.+++++|+..+.+ +.+|
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~G 104 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAG 104 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccC
Confidence 4677777776554311 1122235777788999997777777 5899999999985 888888888754444 6789
Q ss_pred CE--EEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 045405 150 KV--FLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTLFDTTPPVPNEVLTKSFRVGDDVINTIR 217 (240)
Q Consensus 150 Dv--~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~ 217 (240)
+. ++||+|..+...+.+.+ ..+++ ..-.||+..-.. . -.+.+-|.+.|---++.|++|-
T Consensus 105 e~pQ~vVP~G~wqaa~~~~g~-~~LV~--C~VaPGF~f~df---e---l~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 105 ERPQFLVPKGCIFGSAMNQDG-FSLVG--CMVSPGFTFDDF---E---LFSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp EESCEEECTTCEEEEEESSSS-EEEEE--EEESSCCCGGGC---C---BCBHHHHHHSCCTTHHHHTTSC
T ss_pred ceeEEEECCCCEEEEEECCCC-cEEEE--EEECCCccCCce---E---EcCHHHHHhHCchhHHHHHHhh
Confidence 99 99999999999887323 33332 223577644222 1 1345566665655566665553
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.43 E-value=0.00077 Score=58.10 Aligned_cols=63 Identities=13% Similarity=0.046 Sum_probs=50.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEec
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNV 165 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (240)
.++.......||...+.++ +.+|+.|||+|++++.- .+|+ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~--~~~E~~~ILeG~v~lt~--~~G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH--KIHELMNLIEGRVVLSL--ENGS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC--SSCEEEEEEECCEEEEE--TTSC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcC--CCCEEEEEEEeEEEEEe--CCCC--EEEECCCCEEEECCCCEEEEEEC
Confidence 4788889999988554333 35799999999998874 3566 57999999999999998887765
No 127
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.37 E-value=0.0012 Score=56.41 Aligned_cols=73 Identities=7% Similarity=-0.083 Sum_probs=52.4
Q ss_pred ceEEEEEEEcCCc--ccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEec--CCCCEEE
Q 045405 97 GVALFRIDLDVGG--INPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNV--GNEPATF 172 (240)
Q Consensus 97 gls~~~v~l~pGg--~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~--G~~~a~~ 172 (240)
++-+....+.... ..++|||. .-|++||++|++. .+...... .+.+++||++++|+|.+|.+... ++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~~~~~--~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDKNCLV--SYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEETTTTE--EEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECCccce--eEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 4455566666654 36789995 5999999999999 66421111 46899999999999999998765 3344444
Q ss_pred E
Q 045405 173 I 173 (240)
Q Consensus 173 i 173 (240)
+
T Consensus 82 ~ 82 (276)
T 3gbg_A 82 S 82 (276)
T ss_dssp E
T ss_pred E
Confidence 3
No 128
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=97.01 E-value=0.003 Score=52.92 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=59.9
Q ss_pred EcCCcccCCccCCCCCeEEEEee-CEEEEEEEccC-----CeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeC
Q 045405 105 LDVGGINPPHTHPRGTEAGIVTR-GTVLVGLVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNT 178 (240)
Q Consensus 105 l~pGg~~~pH~Hp~a~Ei~yVl~-G~~~v~~v~~~-----g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s 178 (240)
-.+|.++..|+|+ -.++++|++ |++...++|-. |+.....|..+..++||+|+.|.+.+.++. ++++...+.
T Consensus 67 s~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s~ 144 (197)
T 1nxm_A 67 SRKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVND 144 (197)
T ss_dssp EETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEESS
T ss_pred CCCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECCC
Confidence 3678899999995 589999999 99877677655 667788999999999999999999998755 555543332
Q ss_pred -CCCCc
Q 045405 179 -QNPGV 183 (240)
Q Consensus 179 -~~Pg~ 183 (240)
-+|+.
T Consensus 145 ~Y~p~~ 150 (197)
T 1nxm_A 145 YWALEL 150 (197)
T ss_dssp CCCGGG
T ss_pred ccChhh
Confidence 24443
No 129
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.01 E-value=0.0057 Score=50.64 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=55.1
Q ss_pred cCCcccCCccC--CCCCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 106 DVGGINPPHTH--PRGTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 106 ~pGg~~~pH~H--p~a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
.+|.++..|+| ..-.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.+++ ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 47889999999 6678999999999866666532 3666677754 68999999999999999876 555543
Q ss_pred Ee
Q 045405 176 FN 177 (240)
Q Consensus 176 ~~ 177 (240)
.+
T Consensus 135 ~s 136 (185)
T 1ep0_A 135 CT 136 (185)
T ss_dssp ES
T ss_pred cC
Confidence 33
No 130
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=96.99 E-value=0.0024 Score=55.53 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=55.7
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeC--CCCeEEEEecCC-CCEEEEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIP--RALVHFQLNVGN-EPATFIPI 175 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P--~G~~H~~~N~G~-~~a~~i~~ 175 (240)
+....+.||.-+++|-|.+-+.+.||++|+++.. |..|. ..++++||+-... +|+.|.-.|..+ +++.++-+
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQl 140 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQL 140 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEE
Confidence 4467789998899999977555789999998765 55565 5789999999994 557999999754 57666543
No 131
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.98 E-value=0.0037 Score=56.31 Aligned_cols=71 Identities=24% Similarity=0.178 Sum_probs=53.4
Q ss_pred EEEcC-CcccCCccCCCCCeEEEEeeCEEEEEEE-ccC---------------------------------CeEEEEEEC
Q 045405 103 IDLDV-GGINPPHTHPRGTEAGIVTRGTVLVGLV-TTN---------------------------------NTFFSKVLT 147 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v-~~~---------------------------------g~~~~~~l~ 147 (240)
+-+.| |+..++|+.+. .-++..++|+=++.+. .+. ...++.+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 55666 77899999854 6788888999888877 332 012467999
Q ss_pred CCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 148 PGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 148 ~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
+||++++|+|..|+..+.++++..-++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvs 250 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNIT 250 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEE
Confidence 999999999999999997544444443
No 132
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.89 E-value=0.0075 Score=49.88 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=54.8
Q ss_pred cCCcccCCccC--CCCCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 106 DVGGINPPHTH--PRGTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 106 ~pGg~~~pH~H--p~a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
.+|.++..|+| ..-.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.+++ ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 47889999999 6668999999999865555532 4666677754 68999999999999999876 555543
Q ss_pred Ee
Q 045405 176 FN 177 (240)
Q Consensus 176 ~~ 177 (240)
.+
T Consensus 136 ~s 137 (184)
T 2ixk_A 136 TT 137 (184)
T ss_dssp ES
T ss_pred CC
Confidence 33
No 133
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.88 E-value=0.0047 Score=51.99 Aligned_cols=68 Identities=16% Similarity=0.228 Sum_probs=53.9
Q ss_pred cCCcccCCccCC---CCCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 106 DVGGINPPHTHP---RGTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 106 ~pGg~~~pH~Hp---~a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.+|.++..|+|. .-.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.++. ++++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEEE
Confidence 578899999994 358999999999876666632 4666777865 79999999999999999865 55543
No 134
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.77 E-value=0.0014 Score=55.76 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=52.8
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 98 VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
-.+..++++||...++|.| ...|+ +||+|++. +. + .++.+|+.+..|.|..|.... |++.+.++.
T Consensus 146 E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~-~----~~~~~GsWlR~P~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 146 ETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN-D----EVLGRNAWLRLPEGEALSATA-GARGAKIWM 210 (223)
T ss_dssp CEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET-T----EEECTTEEEEECTTCCEEEEE-EEEEEEEEE
T ss_pred cEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC-C----ceECCCeEEEeCCCCccCcEE-CCCCeEEEE
Confidence 3466788999999999999 77886 99999975 22 3 478999999999999999877 666676653
No 135
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.77 E-value=0.017 Score=48.51 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=54.4
Q ss_pred cCCcccCCccCCC---CCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 106 DVGGINPPHTHPR---GTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 106 ~pGg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.+|.++..|+|.. -.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.+++ ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788899999953 58999999999876666632 3566778866 58999999999999999876 55544
Q ss_pred EE
Q 045405 175 IF 176 (240)
Q Consensus 175 ~~ 176 (240)
..
T Consensus 134 ~~ 135 (205)
T 1oi6_A 134 ML 135 (205)
T ss_dssp EE
T ss_pred ec
Confidence 33
No 136
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.65 E-value=0.0078 Score=51.78 Aligned_cols=72 Identities=17% Similarity=0.153 Sum_probs=55.7
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEe--CCCCeEEEEecCC-CCEEEEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLI--PRALVHFQLNVGN-EPATFIPI 175 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~--P~G~~H~~~N~G~-~~a~~i~~ 175 (240)
+....+.||.-+++|-|.+-+.+.||++|++.-. |+-|. ..++++||+-.. -+|+.|.-.|..+ +++.++=+
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQl 117 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQI 117 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEE
Confidence 4467788998889999977666889999998765 55465 578999999998 5558999999753 56666533
No 137
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.65 E-value=0.0042 Score=53.30 Aligned_cols=77 Identities=21% Similarity=0.123 Sum_probs=57.2
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEeeC---EEEEEEEccCC-------------eEE------EEEECCCCEEEeC
Q 045405 98 VALFRIDLDVGGINPPHTHPRGTEAGIVTRG---TVLVGLVTTNN-------------TFF------SKVLTPGKVFLIP 155 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G---~~~v~~v~~~g-------------~~~------~~~l~~GDv~v~P 155 (240)
-.--.+.+.||+..|.|+|+.-.|-+++.-| .+++...++++ +.. ..+|++|+.+.++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4455788999999999999999999999998 44544443332 111 3589999999999
Q ss_pred CCCeEEEEecCCC-CEEEEE
Q 045405 156 RALVHFQLNVGNE-PATFIP 174 (240)
Q Consensus 156 ~G~~H~~~N~G~~-~a~~i~ 174 (240)
+|..|++...+.. ++.+-.
T Consensus 186 Pg~~H~F~ae~g~G~vligE 205 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLVGE 205 (246)
T ss_dssp TTEEEEEEECTTSCCEEEEE
T ss_pred CCCEEEEEecCCCccEEEEE
Confidence 9999999886642 455433
No 138
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.64 E-value=0.015 Score=48.09 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=53.4
Q ss_pred cCCcccCCccCC---CCCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 106 DVGGINPPHTHP---RGTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 106 ~pGg~~~pH~Hp---~a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.+|.++..|+|. .-.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 478899999995 568999999999865566532 4556677754 68999999999999998866 55443
Q ss_pred E
Q 045405 175 I 175 (240)
Q Consensus 175 ~ 175 (240)
.
T Consensus 134 ~ 134 (183)
T 1dzr_A 134 K 134 (183)
T ss_dssp E
T ss_pred E
Confidence 3
No 139
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.63 E-value=0.011 Score=49.48 Aligned_cols=69 Identities=14% Similarity=0.144 Sum_probs=53.2
Q ss_pred EcCCcccCCccCCC---CCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 105 LDVGGINPPHTHPR---GTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 105 l~pGg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
-.+|.++..|+|.. -.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.++. ++++
T Consensus 72 s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 72 SRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp ECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 35788899999953 47999999999966666532 4566777764 79999999999999998764 5554
Q ss_pred E
Q 045405 174 P 174 (240)
Q Consensus 174 ~ 174 (240)
.
T Consensus 151 y 151 (196)
T 1wlt_A 151 F 151 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 140
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.58 E-value=0.0042 Score=51.52 Aligned_cols=65 Identities=23% Similarity=0.458 Sum_probs=49.4
Q ss_pred EEEEEcCCc-ccCCccCCCCCeEEEEeeCEEEEEEEccCC----------------------------------eEEEEE
Q 045405 101 FRIDLDVGG-INPPHTHPRGTEAGIVTRGTVLVGLVTTNN----------------------------------TFFSKV 145 (240)
Q Consensus 101 ~~v~l~pGg-~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g----------------------------------~~~~~~ 145 (240)
..+-+.++| ..++|+.+. .-+..+++|+=+..+..+.. +.++.+
T Consensus 126 ~~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 204 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCI 204 (235)
T ss_dssp EEEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEE
T ss_pred eEEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEE
Confidence 344566655 466787754 67888999999988875531 124678
Q ss_pred ECCCCEEEeCCCCeEEEEecC
Q 045405 146 LTPGKVFLIPRALVHFQLNVG 166 (240)
Q Consensus 146 l~~GDv~v~P~G~~H~~~N~G 166 (240)
|++||++++|+|..|...|.+
T Consensus 205 l~pGD~LyiP~gW~H~V~~l~ 225 (235)
T 4gjz_A 205 LSPGEILFIPVKYWHYVRALD 225 (235)
T ss_dssp ECTTCEEEECTTCEEEEEESS
T ss_pred ECCCCEEEeCCCCcEEEEECC
Confidence 999999999999999999975
No 141
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.56 E-value=0.014 Score=45.53 Aligned_cols=70 Identities=20% Similarity=0.160 Sum_probs=54.9
Q ss_pred CCcccCCc----cCCCCCeEEEEeeCEEEEEEEccCCe---EEEEEECCCCEEEeCCCCeEEEEecCCCCEEE-EEEEe
Q 045405 107 VGGINPPH----THPRGTEAGIVTRGTVLVGLVTTNNT---FFSKVLTPGKVFLIPRALVHFQLNVGNEPATF-IPIFN 177 (240)
Q Consensus 107 pGg~~~pH----~Hp~a~Ei~yVl~G~~~v~~v~~~g~---~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~-i~~~~ 177 (240)
|+++.+.| +|++.-+.+.|++|++++...+.+|. .......+|+..++|++..|.+.-..+ ++.+ +.++.
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFyc 100 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFFV 100 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEEe
Confidence 67788899 59888899999999999987766554 234567899999999999999997555 4555 55553
No 142
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.53 E-value=0.014 Score=48.93 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=54.2
Q ss_pred cCCcccCCccCC---CCCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 106 DVGGINPPHTHP---RGTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 106 ~pGg~~~pH~Hp---~a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.+|.++.+|+|. .-..+++|++|++.--++|-. |+.....|.+ +..++||+|+.|.+.+.+++ ++++.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEEE
Confidence 678899999984 468999999999887788732 5656667765 88999999999999998765 55443
No 143
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.47 E-value=0.02 Score=48.51 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=52.6
Q ss_pred cCCcccCCccCCC---CCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 106 DVGGINPPHTHPR---GTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 106 ~pGg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.+|.++..|+|.. -.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.+++ ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4788999999954 58999999999865556532 4556677765 58999999999999999866 54443
No 144
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.45 E-value=0.028 Score=47.85 Aligned_cols=68 Identities=16% Similarity=0.175 Sum_probs=52.9
Q ss_pred cCCcccCCccCCC---CCeEEEEeeCEEEEEEEccC------CeEEEEEECC--CCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 106 DVGGINPPHTHPR---GTEAGIVTRGTVLVGLVTTN------NTFFSKVLTP--GKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 106 ~pGg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------g~~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
.+|.++..|+|.. -.++++|++|++...++|-. |+.....|.+ +..++||+|+.|.+.+.+++ ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5788899999953 47999999999876666532 4556677755 58999999999999999876 55443
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.27 E-value=0.016 Score=52.15 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=55.6
Q ss_pred EEEcCC-cccCCccCCCCCeEEEEeeCEEEEEEEccCC-----------------------------------eEEEEEE
Q 045405 103 IDLDVG-GINPPHTHPRGTEAGIVTRGTVLVGLVTTNN-----------------------------------TFFSKVL 146 (240)
Q Consensus 103 v~l~pG-g~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g-----------------------------------~~~~~~l 146 (240)
+-+.+. ...++|+.+. .-+..+++|+=++.+..+.. +.++.+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 556654 5678999876 78889999998888765421 3467899
Q ss_pred CCCCEEEeCCCCeEEEEecCC-CCEEEEEEE
Q 045405 147 TPGKVFLIPRALVHFQLNVGN-EPATFIPIF 176 (240)
Q Consensus 147 ~~GDv~v~P~G~~H~~~N~G~-~~a~~i~~~ 176 (240)
++||++++|+|..|...|.++ ...+.+.+.
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 999999999999999999873 445555544
No 146
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.11 E-value=0.048 Score=47.43 Aligned_cols=73 Identities=21% Similarity=0.181 Sum_probs=58.7
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeE-EEEecCCCCEEEE
Q 045405 95 TQGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVH-FQLNVGNEPATFI 173 (240)
Q Consensus 95 ~~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H-~~~N~G~~~a~~i 173 (240)
+-|-+-.++.++|+--.|+-.|.-..| +||++|++.++ + ..+.+|...++|+|+.- .++-.|+++++++
T Consensus 88 d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-----~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL 157 (303)
T 2qdr_A 88 DSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-----E----WQLNKHSYSFIPAGVRIGSWKVLGGEEAEIL 157 (303)
T ss_dssp TTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-----T----EEECTTEEEEECTTCCBCCEEEETTSCEEEE
T ss_pred CCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-----C----EEecCCceEEecCCCccCceeecCCCCcEEE
Confidence 347788999999999999988855566 99999999875 3 47899999999999944 4555688888888
Q ss_pred EEEe
Q 045405 174 PIFN 177 (240)
Q Consensus 174 ~~~~ 177 (240)
.+-+
T Consensus 158 ~fe~ 161 (303)
T 2qdr_A 158 WMEN 161 (303)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7743
No 147
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.91 E-value=0.05 Score=50.72 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=49.3
Q ss_pred EEEEEcCCcc--cCCccCCCCCeEEEEeeCEEEEEEEccCC----------------eEEEEEECCCCEEEeCCCCeEEE
Q 045405 101 FRIDLDVGGI--NPPHTHPRGTEAGIVTRGTVLVGLVTTNN----------------TFFSKVLTPGKVFLIPRALVHFQ 162 (240)
Q Consensus 101 ~~v~l~pGg~--~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g----------------~~~~~~l~~GDv~v~P~G~~H~~ 162 (240)
..+.+.|+|. .++||-+ .+-+++.++|+=+..+..+.. ..+..+|++||++++|+|..|+.
T Consensus 141 ~n~y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~ 219 (442)
T 2xdv_A 141 SNVYITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQA 219 (442)
T ss_dssp EEEEEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEE
T ss_pred cceEECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEE
Confidence 3445666664 3699974 467888888998888766531 12468999999999999999999
Q ss_pred EecC
Q 045405 163 LNVG 166 (240)
Q Consensus 163 ~N~G 166 (240)
.+.+
T Consensus 220 ~s~~ 223 (442)
T 2xdv_A 220 DTPA 223 (442)
T ss_dssp ECCS
T ss_pred EecC
Confidence 9875
No 148
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.65 E-value=0.036 Score=49.64 Aligned_cols=72 Identities=17% Similarity=0.075 Sum_probs=53.3
Q ss_pred EEEEEcCC-cccCCccCCCCCeEEEEeeCEEEEEEEccC------------------------------CeEEEEEECCC
Q 045405 101 FRIDLDVG-GINPPHTHPRGTEAGIVTRGTVLVGLVTTN------------------------------NTFFSKVLTPG 149 (240)
Q Consensus 101 ~~v~l~pG-g~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~------------------------------g~~~~~~l~~G 149 (240)
..+-+.|. +..++|+-+. .-+...++|+=++.+..+. .+.++.+|++|
T Consensus 169 s~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pG 247 (338)
T 3al5_A 169 SVFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAG 247 (338)
T ss_dssp EEEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTT
T ss_pred ceeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCC
Confidence 34445554 4577898765 6788889999888877542 02467899999
Q ss_pred CEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 150 KVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 150 Dv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
|++++|+|..|+..|.+ ..+.+.+
T Consensus 248 D~LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 248 DVLFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp CEEEECTTCEEEEEESS--CEEEEEE
T ss_pred CEEEECCCCeEEEeeCC--CEEEEEE
Confidence 99999999999999984 4455553
No 149
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=95.58 E-value=0.063 Score=46.92 Aligned_cols=94 Identities=14% Similarity=0.105 Sum_probs=59.6
Q ss_pred ceEEEecccCCCCCCccceEEEEEEEcCCcc---cCCccCCCC--C------eEEEE-e---eCEEEEEEEccCCe-EEE
Q 045405 80 RAVTFGDVFGFPAVNTQGVALFRIDLDVGGI---NPPHTHPRG--T------EAGIV-T---RGTVLVGLVTTNNT-FFS 143 (240)
Q Consensus 80 ~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~---~~pH~Hp~a--~------Ei~yV-l---~G~~~v~~v~~~g~-~~~ 143 (240)
..+......+.| .-.+-+..+ +.|||. .|||.|++. . |+.|- + +|.+.-.+...++. -..
T Consensus 138 R~V~~i~~~~~~---a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~ 213 (270)
T 2qjv_A 138 RLVHNILPDSQL---ADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDEC 213 (270)
T ss_dssp EEEEEEECTTSC---CSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEE
T ss_pred hhhhhhcCCCCC---cceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceE
Confidence 444343333444 334667776 888885 499999764 4 88865 3 35655544333331 135
Q ss_pred EEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEeC
Q 045405 144 KVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNT 178 (240)
Q Consensus 144 ~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s 178 (240)
..++-||++.+|+|. |-....-.....++-+.-.
T Consensus 214 ~~V~~~d~VlvP~Gy-Hp~~a~pGy~~YylwvMaG 247 (270)
T 2qjv_A 214 MAVYNRDVVXVPXGY-HPVATIAGYDNYYLNVMAG 247 (270)
T ss_dssp EEEETTCEEEESSSB-CCEEECTTCEEEEEEEEEC
T ss_pred EEEECCCEEecCCCc-CCCcCCCCcccEEEEEEEC
Confidence 899999999999999 9865543344556665544
No 150
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.48 E-value=0.081 Score=49.91 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=52.7
Q ss_pred EEEEEcCCcc--cCCccCCCCCeEEEEeeCEEEEEEEccCC--------------------eEEEEEECCCCEEEeCCCC
Q 045405 101 FRIDLDVGGI--NPPHTHPRGTEAGIVTRGTVLVGLVTTNN--------------------TFFSKVLTPGKVFLIPRAL 158 (240)
Q Consensus 101 ~~v~l~pGg~--~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g--------------------~~~~~~l~~GDv~v~P~G~ 158 (240)
+.+.+.|+|. .+|||-+. +-+++-++|+=+..+..+.. ...+.+|++||++++|+|.
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~ 244 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGF 244 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTC
T ss_pred ceEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCC
Confidence 3466777664 57998754 56666777776777765431 1246899999999999999
Q ss_pred eEEEEecCCCCEEEEEE
Q 045405 159 VHFQLNVGNEPATFIPI 175 (240)
Q Consensus 159 ~H~~~N~G~~~a~~i~~ 175 (240)
.|+..+.+++...-+.+
T Consensus 245 ~H~~~s~~~~~SlhlTi 261 (489)
T 4diq_A 245 IHQAECQDGVHSLHLTL 261 (489)
T ss_dssp EEEEEBCSSCCEEEEEE
T ss_pred ceEEEecCCCceEEEee
Confidence 99999987655444443
No 151
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.06 E-value=0.034 Score=49.07 Aligned_cols=71 Identities=18% Similarity=0.176 Sum_probs=47.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccC--CeE-----EEEEECCCCEEEeCCCCeEEEEecCCCC
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTN--NTF-----FSKVLTPGKVFLIPRALVHFQLNVGNEP 169 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~--g~~-----~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (240)
.+..+|+.+.||+.+.||.=+ .|+....+|..++.+--.. +.. ..+.+++|+++++....+|+..|.|+++
T Consensus 90 ~l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 90 HLQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEIS 167 (290)
T ss_dssp SEEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSC
T ss_pred hhheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCC
Confidence 347788899999999888332 2655555777776654221 111 1578999999999999999999999765
No 152
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.70 E-value=0.14 Score=47.88 Aligned_cols=57 Identities=12% Similarity=0.079 Sum_probs=44.4
Q ss_pred cCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEE
Q 045405 111 NPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 111 ~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~ 174 (240)
...-++.+++|++++.+|++++.- +-|+ ..+++||+++||+|+.+.+.=.+ +++.++
T Consensus 170 ~~~f~NaDGD~Livpq~G~l~i~T--EfG~---L~v~pgei~VIPRGi~frv~l~~--p~Rgyi 226 (471)
T 1eyb_A 170 NRCFYNSDGDFLIVPQKGNLLIYT--EFGK---MLVQPNEICVIQRGMRFSIDVFE--ETRGYI 226 (471)
T ss_dssp SEEEEESSEEEEEEEEESCEEEEE--TTEE---EEECTTEEEEECTTCCEEEECSS--SEEEEE
T ss_pred cceeecCCCCEEEEEEeCCEEEEE--eccc---EEeccCCEEEECCccEEEEeeCC--CceEEE
Confidence 344557788999999999998774 4465 57899999999999999886554 665544
No 153
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.64 E-value=0.092 Score=47.17 Aligned_cols=66 Identities=20% Similarity=0.252 Sum_probs=49.4
Q ss_pred EEEEcCC-cccCCccCCCCC-eEEEEeeCEEEEEEEccCC---------------------------------------e
Q 045405 102 RIDLDVG-GINPPHTHPRGT-EAGIVTRGTVLVGLVTTNN---------------------------------------T 140 (240)
Q Consensus 102 ~v~l~pG-g~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g---------------------------------------~ 140 (240)
.+-+.+. ...+.|+++..+ -+..++.|+=++.+..+.. +
T Consensus 175 ~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~ 254 (336)
T 3k2o_A 175 WFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFK 254 (336)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGC
T ss_pred EEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCc
Confidence 3455554 457789887643 5888999988877765421 1
Q ss_pred EEEEEECCCCEEEeCCCCeEEEEecCC
Q 045405 141 FFSKVLTPGKVFLIPRALVHFQLNVGN 167 (240)
Q Consensus 141 ~~~~~l~~GDv~v~P~G~~H~~~N~G~ 167 (240)
.+..++++||++++|+|..|+..|.++
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 246789999999999999999999864
No 154
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.45 E-value=0.27 Score=42.91 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=51.9
Q ss_pred EEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCC--CCeEEEEecCCCCEEEE
Q 045405 104 DLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPR--ALVHFQLNVGNEPATFI 173 (240)
Q Consensus 104 ~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~--G~~H~~~N~G~~~a~~i 173 (240)
...|+.-+++|-|.+-+-+.||++|++.-. |+-|. ..++++||+=..-+ |+.|.-.|..++++..+
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~l 112 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSL 112 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEE
Confidence 667888899999976444779999998765 55566 67999999988766 56899999876776654
No 155
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.12 E-value=0.12 Score=48.35 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=54.4
Q ss_pred EEEcC-CcccCCccCCCCC-eEEEEeeCEEEEEEEccCC-------------------------eEEEEEECCCCEEEeC
Q 045405 103 IDLDV-GGINPPHTHPRGT-EAGIVTRGTVLVGLVTTNN-------------------------TFFSKVLTPGKVFLIP 155 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g-------------------------~~~~~~l~~GDv~v~P 155 (240)
+-+.| |...+.|+.+..+ -+..++.|+=+..+..|.. +.+..++++||+++||
T Consensus 200 ~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIP 279 (451)
T 2yu1_A 200 CLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIP 279 (451)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEEC
T ss_pred EEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeC
Confidence 34555 4467889987654 5678999998888876531 2346789999999999
Q ss_pred CCCeEEEEecCCCCEEEEEEEeCCC
Q 045405 156 RALVHFQLNVGNEPATFIPIFNTQN 180 (240)
Q Consensus 156 ~G~~H~~~N~G~~~a~~i~~~~s~~ 180 (240)
.|..|.+.|..+.-++-.-++++.|
T Consensus 280 sGWwH~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 280 SGWIHAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp TTCEEEEECSSCEEEEEEEECCSSS
T ss_pred CCceEEEecCCCeEEEeeeeCCccc
Confidence 9999999997543222223444443
No 156
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.73 E-value=0.094 Score=49.47 Aligned_cols=65 Identities=18% Similarity=0.247 Sum_probs=50.1
Q ss_pred EEEcC-CcccCCccCCCCC-eEEEEeeCEEEEEEEccCC-------------------------eEEEEEECCCCEEEeC
Q 045405 103 IDLDV-GGINPPHTHPRGT-EAGIVTRGTVLVGLVTTNN-------------------------TFFSKVLTPGKVFLIP 155 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g-------------------------~~~~~~l~~GDv~v~P 155 (240)
+-+.| |...+.|+.+..+ -+..+++|+=++.+..|.. +.+..++++||++++|
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIP 349 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 349 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeC
Confidence 44555 4567889987654 4668999999988886620 2346799999999999
Q ss_pred CCCeEEEEecCC
Q 045405 156 RALVHFQLNVGN 167 (240)
Q Consensus 156 ~G~~H~~~N~G~ 167 (240)
.|..|++.|..+
T Consensus 350 sGWwH~V~nled 361 (488)
T 3kv5_D 350 TGWIHAVLTSQD 361 (488)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEeeCCCC
Confidence 999999999743
No 157
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=93.61 E-value=0.27 Score=43.07 Aligned_cols=53 Identities=11% Similarity=0.024 Sum_probs=41.3
Q ss_pred EcCCccc-CCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEec
Q 045405 105 LDVGGIN-PPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNV 165 (240)
Q Consensus 105 l~pGg~~-~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (240)
+.+|... ..- ..+-++++++|+..+.+ +++ ++.|++||.+.||++..|.+...
T Consensus 214 ~G~Ges~~~~~---~~d~wiWqLEGss~Vt~---~~q--~~~L~~~DsLLIpa~~~y~~~r~ 267 (286)
T 2qnk_A 214 YGQGSSEGLRQ---NVDVWLWQLEGSSVVTM---GGR--RLSLAPDDSLLVLAGTSYAWERT 267 (286)
T ss_dssp ECSEEEEECCC---SSCEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEEC
T ss_pred EcCCccccccC---cCcEEEEEEcCceEEEE---CCe--EEeccCCCEEEecCCCeEEEEec
Confidence 6666542 222 22789999999998776 466 78999999999999999998764
No 158
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.48 E-value=0.46 Score=39.49 Aligned_cols=88 Identities=19% Similarity=0.177 Sum_probs=56.7
Q ss_pred cCCCCCCccce-EEEEEEEcCCcccCCccCCCCCeEEE----EeeC-EEEEEEEccCCeEEEEEECCCCEEEeCCCCeEE
Q 045405 88 FGFPAVNTQGV-ALFRIDLDVGGINPPHTHPRGTEAGI----VTRG-TVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHF 161 (240)
Q Consensus 88 ~~~P~l~~~gl-s~~~v~l~pGg~~~pH~Hp~a~Ei~y----Vl~G-~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~ 161 (240)
+++|.+..... ++....|.||+.+.||..+....+-+ ++-. ...+.+ +|+ ....++|++++|.-...|.
T Consensus 91 ~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V---~~~--~~~w~eGe~~~fDds~~He 165 (197)
T 3rcq_A 91 EKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC---ANE--TKTWEEGKVLIFDDSFEHE 165 (197)
T ss_dssp TTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE---TTE--EECCCBTCEEEECTTSCEE
T ss_pred HhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE---CCE--EEEeeCCcEEEEcCCeEEE
Confidence 45554432111 57778999999999999876444322 1111 222222 133 5788999999999999999
Q ss_pred EEecCCCCEEEEEEEeCCCC
Q 045405 162 QLNVGNEPATFIPIFNTQNP 181 (240)
Q Consensus 162 ~~N~G~~~a~~i~~~~s~~P 181 (240)
..|.++++-+ +-+++-..|
T Consensus 166 v~N~~d~~Rv-vL~~D~~rP 184 (197)
T 3rcq_A 166 VWQDASSFRL-IFIVDVWHP 184 (197)
T ss_dssp EEECSSSCEE-EEEEEEECT
T ss_pred EEECCCCCEE-EEEEeeeCC
Confidence 9999887644 334554444
No 159
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.37 E-value=0.2 Score=46.70 Aligned_cols=65 Identities=20% Similarity=0.249 Sum_probs=49.4
Q ss_pred EEEcC-CcccCCccCCCCC-eEEEEeeCEEEEEEEccCC-------------------------eEEEEEECCCCEEEeC
Q 045405 103 IDLDV-GGINPPHTHPRGT-EAGIVTRGTVLVGLVTTNN-------------------------TFFSKVLTPGKVFLIP 155 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g-------------------------~~~~~~l~~GDv~v~P 155 (240)
+-+.| |+....|.-+..+ -+..+++|+=+..+..|.. +.+..++++||++++|
T Consensus 235 ~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIP 314 (447)
T 3kv4_A 235 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 314 (447)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecC
Confidence 44444 4567889887654 4668999999888876531 2246799999999999
Q ss_pred CCCeEEEEecCC
Q 045405 156 RALVHFQLNVGN 167 (240)
Q Consensus 156 ~G~~H~~~N~G~ 167 (240)
.|..|+..|..+
T Consensus 315 sGWwH~V~nled 326 (447)
T 3kv4_A 315 TGWIHAVLTPVD 326 (447)
T ss_dssp TTCEEEEEESSC
T ss_pred CCCeEEEecCCC
Confidence 999999999854
No 160
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=93.20 E-value=0.63 Score=40.85 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=52.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEe-eCEEEEEEEccCCeEEEEEECCCCEEEeCC--CCeEEEEecCCCCEEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVT-RGTVLVGLVTTNNTFFSKVLTPGKVFLIPR--ALVHFQLNVGNEPATFI 173 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl-~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~--G~~H~~~N~G~~~a~~i 173 (240)
+....+.|+.-+++|-|.+-+-+.||+ +|++... |+-|. ..++++||+=..-+ |+.|.-.|..++++..+
T Consensus 42 ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~l 114 (290)
T 1j1l_A 42 FDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGL 114 (290)
T ss_dssp EEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEE
T ss_pred EEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEE
Confidence 445567888778999996644477999 9998765 55565 57899999987765 56899999766676655
No 161
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=92.90 E-value=0.16 Score=46.60 Aligned_cols=64 Identities=19% Similarity=0.240 Sum_probs=49.7
Q ss_pred EEEcC-CcccCCccCCCCC-eEEEEeeCEEEEEEEccCC-------------------------eEEEEEECCCCEEEeC
Q 045405 103 IDLDV-GGINPPHTHPRGT-EAGIVTRGTVLVGLVTTNN-------------------------TFFSKVLTPGKVFLIP 155 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g-------------------------~~~~~~l~~GDv~v~P 155 (240)
+-+.| |...+.|+.+..+ -+..+++|+=+..+..|.. +.+...+++||++++|
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 45555 4567889998765 3568999998888886531 2346789999999999
Q ss_pred CCCeEEEEecC
Q 045405 156 RALVHFQLNVG 166 (240)
Q Consensus 156 ~G~~H~~~N~G 166 (240)
.|..|+..|..
T Consensus 259 sGW~H~V~nle 269 (397)
T 3kv9_A 259 TGWIHAVLTSQ 269 (397)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCeEEccCCc
Confidence 99999999974
No 162
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=92.79 E-value=0.18 Score=46.02 Aligned_cols=65 Identities=20% Similarity=0.260 Sum_probs=49.6
Q ss_pred EEEcC-CcccCCccCCCCCe-EEEEeeCEEEEEEEccCC-------------------------eEEEEEECCCCEEEeC
Q 045405 103 IDLDV-GGINPPHTHPRGTE-AGIVTRGTVLVGLVTTNN-------------------------TFFSKVLTPGKVFLIP 155 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~E-i~yVl~G~~~v~~v~~~g-------------------------~~~~~~l~~GDv~v~P 155 (240)
+-+.| |+..+.|..+..+- +..+++|+=+..+..|.. +.+..++++||++++|
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIP 230 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 230 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeC
Confidence 44444 55688899877654 568999998888875431 2356799999999999
Q ss_pred CCCeEEEEecCC
Q 045405 156 RALVHFQLNVGN 167 (240)
Q Consensus 156 ~G~~H~~~N~G~ 167 (240)
.|..|+..|..+
T Consensus 231 sGWwH~V~nled 242 (371)
T 3k3o_A 231 TGWIHAVLTPVD 242 (371)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEEecCCC
Confidence 999999999743
No 163
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=92.40 E-value=1.2 Score=38.93 Aligned_cols=81 Identities=22% Similarity=0.250 Sum_probs=53.5
Q ss_pred ceEEEEEEEcCCcc---cCCccCCCCCeEEEEee----CEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCC
Q 045405 97 GVALFRIDLDVGGI---NPPHTHPRGTEAGIVTR----GTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEP 169 (240)
Q Consensus 97 gls~~~v~l~pGg~---~~pH~Hp~a~Ei~yVl~----G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (240)
.+-+..-.+.|||. .|||.|.+..|.+|-.+ |.+. +++.+.++.....++-||++++|...+|. ..|.+.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~-q~~g~p~Etrhi~V~n~daVlvP~wh~h~--~~G~~~ 255 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVF-HMMGQPQETRHIVMHNEQAVISPSWSIHS--GVGTKA 255 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEE-EEEEETTEEEEEEECSSEEEEECTTCEEE--EEESSC
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEE-EEeCCCCCeeEEEEECCCEEEeCCCCCCC--CCCccc
Confidence 46677778888873 69999987777777655 4433 33333344445678999999999656666 446666
Q ss_pred EEEEEEEeCCC
Q 045405 170 ATFIPIFNTQN 180 (240)
Q Consensus 170 a~~i~~~~s~~ 180 (240)
-.+|.+.-.+|
T Consensus 256 Y~ylwvMAG~n 266 (282)
T 1xru_A 256 YTFIWGMVGEN 266 (282)
T ss_dssp CEEEEEEEESC
T ss_pred eEEEEEEEcCC
Confidence 55555554444
No 164
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=91.07 E-value=1.4 Score=38.63 Aligned_cols=81 Identities=21% Similarity=0.234 Sum_probs=44.0
Q ss_pred ceEEEEEEEcCCcc---cCCccCCCCCeEEEEee----CEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCC
Q 045405 97 GVALFRIDLDVGGI---NPPHTHPRGTEAGIVTR----GTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEP 169 (240)
Q Consensus 97 gls~~~v~l~pGg~---~~pH~Hp~a~Ei~yVl~----G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (240)
.+-+..-.+.|||. .|||.|.+..|..|-.+ |.+. ++..+-++.....++-||++++|+|-.|- ..|...
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~-h~~g~pdEtrh~~V~n~daVlvP~wgyHp--~~Gt~~ 255 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIF-HMMGKPDETKHLVMSNEQAAISPSWSIHS--GVGTSN 255 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEE-EEESSTTSCEEEEECTTEEEEECTTSCCC--EEESSC
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEE-EECCCCCceEEEEEECCCEEEeCCCcccC--CCCCcC
Confidence 46677778888873 69999987778776544 3322 22222233335678999999999988885 234444
Q ss_pred EEEEEEEeCCC
Q 045405 170 ATFIPIFNTQN 180 (240)
Q Consensus 170 a~~i~~~~s~~ 180 (240)
-.+|.+.-.+|
T Consensus 256 Y~ylwvMAG~n 266 (289)
T 1ywk_A 256 YSFIWAMCGEN 266 (289)
T ss_dssp CEEEEEEECC-
T ss_pred eEEEEEEEcCC
Confidence 44555554433
No 165
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=90.72 E-value=3.6 Score=34.78 Aligned_cols=132 Identities=8% Similarity=0.050 Sum_probs=81.6
Q ss_pred CcCCceEEEecccCC------CCCCccceEEEEEEEcCCcccCCccC-CCCCeEEEEeeCE-EEEEEEccCC--------
Q 045405 76 DVFKRAVTFGDVFGF------PAVNTQGVALFRIDLDVGGINPPHTH-PRGTEAGIVTRGT-VLVGLVTTNN-------- 139 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~------P~l~~~gls~~~v~l~pGg~~~pH~H-p~a~Ei~yVl~G~-~~v~~v~~~g-------- 139 (240)
.+.||+.++...... .+-+ ...+....-|.+|.. -||| -++.|+.+...|. +++.+++++|
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~ 109 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAA 109 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC---
T ss_pred CCCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCCcccccccc
Confidence 467777776654433 1212 124555667788875 4666 4789999999998 5788888777
Q ss_pred --------------------eEEEEEE----CCCC--EEEeCCCCeEEEEecCCC-----CEEEEEEEeCCCCCceeccc
Q 045405 140 --------------------TFFSKVL----TPGK--VFLIPRALVHFQLNVGNE-----PATFIPIFNTQNPGVSDSIG 188 (240)
Q Consensus 140 --------------------~~~~~~l----~~GD--v~v~P~G~~H~~~N~G~~-----~a~~i~~~~s~~Pg~~~~~~ 188 (240)
+..+.+| .+|+ -++||+|......-.+++ ...+++.. -.||+..-..
T Consensus 110 ~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCt--VaPGFdF~DF 187 (225)
T 3m3i_A 110 QPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCI--VSPGFDYRDF 187 (225)
T ss_dssp ---------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEE--EESCCCGGGC
T ss_pred cccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEE--EcCCccchhc
Confidence 4445555 4466 568999987666655532 34444322 3477655322
Q ss_pred hhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 045405 189 TLFDTTPPVPNEVLTKSFRVGDDVINTIRA 218 (240)
Q Consensus 189 ~lf~s~~~~p~~vla~af~v~~~~v~~l~~ 218 (240)
. -++.+-|.+.|---++.|++|-.
T Consensus 188 ---e---l~~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 188 ---E---IFTQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp ---E---ECBHHHHHHHCGGGHHHHHHHSB
T ss_pred ---E---ecCHHHHHHHCchHHHHHHHhch
Confidence 2 24566667677767777887754
No 166
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=90.71 E-value=0.41 Score=43.89 Aligned_cols=65 Identities=15% Similarity=0.198 Sum_probs=49.2
Q ss_pred EEEcC-CcccCCccCCCCC-eEEEEeeCEEEEEEEccCC-------------------------eEEEEEECCCCEEEeC
Q 045405 103 IDLDV-GGINPPHTHPRGT-EAGIVTRGTVLVGLVTTNN-------------------------TFFSKVLTPGKVFLIP 155 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g-------------------------~~~~~~l~~GDv~v~P 155 (240)
+-+.| |+....|.-+..+ -+..+++|+=+..+..|.. +-+..++++||++++|
T Consensus 178 ~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIP 257 (392)
T 3pua_A 178 CLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIP 257 (392)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeC
Confidence 44444 5567889887654 5678999998888875531 2246799999999999
Q ss_pred CCCeEEEEecCC
Q 045405 156 RALVHFQLNVGN 167 (240)
Q Consensus 156 ~G~~H~~~N~G~ 167 (240)
.|..|+..|..+
T Consensus 258 sGWwH~V~nled 269 (392)
T 3pua_A 258 SGWIYATLTPVD 269 (392)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEEecCCC
Confidence 999999999743
No 167
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=90.40 E-value=6.2 Score=31.96 Aligned_cols=128 Identities=14% Similarity=0.137 Sum_probs=79.9
Q ss_pred CcC-CceEEEecccC-------CCCCCccceEEEEEEEcCCcccCCccC-CCCCeEEEEeeCE-EEEEEEccCCeEEEEE
Q 045405 76 DVF-KRAVTFGDVFG-------FPAVNTQGVALFRIDLDVGGINPPHTH-PRGTEAGIVTRGT-VLVGLVTTNNTFFSKV 145 (240)
Q Consensus 76 ~~~-G~~v~~~~~~~-------~P~l~~~gls~~~v~l~pGg~~~pH~H-p~a~Ei~yVl~G~-~~v~~v~~~g~~~~~~ 145 (240)
.+. ||+.++..... ..+-+ ...+....-|.+|... ||| -+++|+.+-..|. +++.+++++|+..+.+
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R-~~~TaIYfLL~~~~~S--~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~ 100 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKR-SVLTMIYYLMQAGQPD--PFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSI 100 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCE-ESCEEEEEEEETTCCE--EEEECSSEEEEEEEEESCEEEEEECTTSCEEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCc-ccceEEEEEEcCCCCc--cCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEE
Confidence 455 77666655432 12222 1245666777888754 555 3689999999996 6899999988766665
Q ss_pred E----CCCC---EEEeCCCCeEEEEecCCCCEEEEEEEeCCCCCceeccchhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 045405 146 L----TPGK---VFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTLFDTTPPVPNEVLTKSFRVGDDVINTIR 217 (240)
Q Consensus 146 l----~~GD---v~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~ 217 (240)
| .+|+ -++||+|....... ....+++. .-.||+..-. |. -.+++-|.+.|---++.|++|-
T Consensus 101 LG~d~~~Ge~~pQ~vVP~G~WqaA~~---~~~~LVsc--tVaPGF~f~d---fe---l~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 101 LGNPLEHPEARHQVVVPRRVWFAQEV---DGYCLASV--LVAPGFDFKD---FS---LGKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp ESCTTTSTTCBSEEEECTTCEEEEEE---SSEEEEEE--EEESCCCGGG---CE---ECCHHHHHHHCGGGHHHHHHTS
T ss_pred eCCCcccCCcceEEEECCCEEEEEEe---CCcEEEEE--EEcCCccchh---cE---EcCHHHHHHHCchHHHHHHHhc
Confidence 5 4678 67999998766655 33444432 2347765432 22 2456666666765666666653
No 168
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=89.61 E-value=1.2 Score=35.56 Aligned_cols=127 Identities=11% Similarity=0.073 Sum_probs=79.2
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeC-----CC--CeEEEEecCCCCEEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIP-----RA--LVHFQLNVGNEPATF 172 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P-----~G--~~H~~~N~G~~~a~~ 172 (240)
....+++|..+-.. ......+++|++|.+++...+++|+ .....+.+||++.+. .+ ..+..... ++.++
T Consensus 27 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~--~~~~~ 103 (220)
T 3dv8_A 27 ITQHVKKGTIIHNG-NMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAE--KDTDL 103 (220)
T ss_dssp EEEEECTTCEEEEG-GGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEES--SCEEE
T ss_pred ceEEeCCCCEEECC-CCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEe--eeeEE
Confidence 45678888764322 2235789999999999999888775 334678999996321 12 22333333 45555
Q ss_pred EEEEe-------CCCCCcee----------------------------ccc------hhhcC-CCCCCHHHHHhhcCCCH
Q 045405 173 IPIFN-------TQNPGVSD----------------------------SIG------TLFDT-TPPVPNEVLTKSFRVGD 210 (240)
Q Consensus 173 i~~~~-------s~~Pg~~~----------------------------~~~------~lf~s-~~~~p~~vla~af~v~~ 210 (240)
+.+-. ..+|.... +.. ...+. .-.++.+-+|...|+++
T Consensus 104 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 183 (220)
T 3dv8_A 104 WIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHR 183 (220)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCH
T ss_pred EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCH
Confidence 43321 12442110 000 01110 01588999999999999
Q ss_pred HHHHHHHhhcCCCceEEecC
Q 045405 211 DVINTIRAARAQSSWINILD 230 (240)
Q Consensus 211 ~~v~~l~~~~~~~~~i~~~~ 230 (240)
+++.++.+.....+.|...+
T Consensus 184 ~tvsR~l~~L~~~g~I~~~~ 203 (220)
T 3dv8_A 184 EVITRMLRYFQVEGLVKLSR 203 (220)
T ss_dssp HHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHHHHHHCCCEEeCC
Confidence 99999999888888887654
No 169
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=89.41 E-value=1 Score=37.55 Aligned_cols=75 Identities=25% Similarity=0.280 Sum_probs=45.7
Q ss_pred EEEEEEcCCcccCCccCCCCC--eEEEEee--CEEEEEEEccC------------------CeEEEEEECCCCEEEeCCC
Q 045405 100 LFRIDLDVGGINPPHTHPRGT--EAGIVTR--GTVLVGLVTTN------------------NTFFSKVLTPGKVFLIPRA 157 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~--Ei~yVl~--G~~~v~~v~~~------------------g~~~~~~l~~GDv~v~P~G 157 (240)
.-...+++|+...+|.|+++. -++|+-. +.+.+.+.++. .......-++||+++||.-
T Consensus 105 ~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~ 184 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW 184 (216)
T ss_dssp EEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT
T ss_pred EEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC
Confidence 445677899999999998642 1223322 22334444442 1112446699999999999
Q ss_pred CeEEEEe-cCCCCEEEEE
Q 045405 158 LVHFQLN-VGNEPATFIP 174 (240)
Q Consensus 158 ~~H~~~N-~G~~~a~~i~ 174 (240)
+.|...- .++++-+-|+
T Consensus 185 l~H~V~p~~~~~~RiSIs 202 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISVS 202 (216)
T ss_dssp SCEEECCCCSSSCEEEEE
T ss_pred CEEeccCCCCCCCEEEEE
Confidence 9999864 3444444443
No 170
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=88.82 E-value=1.4 Score=32.34 Aligned_cols=56 Identities=14% Similarity=0.023 Sum_probs=41.8
Q ss_pred EEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEec
Q 045405 104 DLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNV 165 (240)
Q Consensus 104 ~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (240)
.+.||- .+....+.|+.-|++|++++.+- |...++.+++||.|.+|++.-.-++-.
T Consensus 29 Vm~pGe---ytF~T~~~E~M~vvsG~~~V~lp---g~~ew~~~~aGesF~Vpans~F~l~v~ 84 (94)
T 2oyz_A 29 VMLPGE---YTFGTQAPERMTVVKGALVVKRV---GEADWTTYSSGESFDVEGNSSFELQVK 84 (94)
T ss_dssp EECSEE---EEEEESSCEEEEEEESEEEEEET---TCSSCEEEETTCEEEECSSEEEEEEES
T ss_pred EEeceE---EEEcCCCeEEEEEEEeEEEEEcC---CCCcCEEECCCCEEEECCCCEEEEEEc
Confidence 455654 23344579999999999999884 322278999999999999987766653
No 171
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=88.66 E-value=0.53 Score=44.71 Aligned_cols=64 Identities=17% Similarity=0.214 Sum_probs=47.8
Q ss_pred EEEcC-CcccCCccCCCCC-eEEEEeeCEEEEEEEccC-------------------------CeEEEEEECCCCEEEeC
Q 045405 103 IDLDV-GGINPPHTHPRGT-EAGIVTRGTVLVGLVTTN-------------------------NTFFSKVLTPGKVFLIP 155 (240)
Q Consensus 103 v~l~p-Gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~-------------------------g~~~~~~l~~GDv~v~P 155 (240)
+-+.| |+...+|.-+..+ -+..|++|+=+..+..|. ++.+..++++||++++|
T Consensus 300 ~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIP 379 (528)
T 3pur_A 300 CLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIP 379 (528)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEec
Confidence 33444 4467788876654 567899999888887653 11235789999999999
Q ss_pred CCCeEEEEecC
Q 045405 156 RALVHFQLNVG 166 (240)
Q Consensus 156 ~G~~H~~~N~G 166 (240)
.|..|+..|..
T Consensus 380 sGW~HaV~tle 390 (528)
T 3pur_A 380 AGWIHAVLTPV 390 (528)
T ss_dssp TTCEEEEEEEE
T ss_pred CCceEEEecCC
Confidence 99999999974
No 172
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=88.06 E-value=2 Score=38.02 Aligned_cols=59 Identities=15% Similarity=0.287 Sum_probs=42.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQL 163 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~ 163 (240)
-+++.++++.++... .......+++|++|++++.. +++ ...+++||.+++|++...+..
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~~~~i 308 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMPDFTI 308 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCCEEE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCceEEE
Confidence 467778888754322 22356899999999998865 355 568999999999998754443
No 173
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=87.43 E-value=2 Score=32.40 Aligned_cols=66 Identities=14% Similarity=0.109 Sum_probs=47.0
Q ss_pred EEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 104 DLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 104 ~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
.+.||- .|-+....+.|+.-|++|++++.+-++ ..++.+++|+.|.+|++.-.-++-. ++...++.
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~---~eW~~~~aGesF~VpanssF~lkv~--~~~~Y~C~ 108 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADS---TESELFRAGQSFYVPGNSLFKIETD--EVLDYVCH 108 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTC---SSCEEEETTCEEEECTTCEEEEECS--SCEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCc---ccCEEeCCCCEEEECCCCcEEEEEC--cceeEEEE
Confidence 456652 224555668999999999999998432 2378999999999999988776653 44444443
No 174
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=86.94 E-value=4 Score=31.13 Aligned_cols=55 Identities=18% Similarity=0.140 Sum_probs=39.7
Q ss_pred eEEEEeeCEEEEEEEccCCe---EEEEEECCCCEEEeCCCCeEEEEecCCCCEEE-EEEEe
Q 045405 121 EAGIVTRGTVLVGLVTTNNT---FFSKVLTPGKVFLIPRALVHFQLNVGNEPATF-IPIFN 177 (240)
Q Consensus 121 Ei~yVl~G~~~v~~v~~~g~---~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~-i~~~~ 177 (240)
..+-|++|+++....+.++. .....+.+|+..++|+...|.+.-. +++.+ |.++.
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~s--dD~~f~leFyc 98 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELS--DDAQFNINFWS 98 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEEC--TTCEEEEEEEE
T ss_pred EEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEEC--CCeEEEEEEEE
Confidence 45689999999987664442 1345789999999999999999943 33444 44443
No 175
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=86.90 E-value=2.9 Score=38.75 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=47.7
Q ss_pred ceEEEEEEEc--CCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEE-EEECCCCEEEeCCCCeEEEEec---CCCCE
Q 045405 97 GVALFRIDLD--VGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFS-KVLTPGKVFLIPRALVHFQLNV---GNEPA 170 (240)
Q Consensus 97 gls~~~v~l~--pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~-~~l~~GDv~v~P~G~~H~~~N~---G~~~a 170 (240)
.+++.++++. +++....-.+ ....+++|++|++++... +++. . ..|++||++++|++..-.+.+. +.+.+
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~~--~~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~ 431 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQIT--GDDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQDF 431 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEET--TCGG-GCEEEETTCEEEECTTCCEEEEECSSCCSSCC
T ss_pred eEEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEeC--Cccc-ceEEeccCCEEEEeCCCcEEEEEecccCCCcE
Confidence 4788888887 4422111112 458999999999998752 2210 1 4899999999999944334444 13445
Q ss_pred EEEEEE
Q 045405 171 TFIPIF 176 (240)
Q Consensus 171 ~~i~~~ 176 (240)
.++.++
T Consensus 432 ~~~~a~ 437 (440)
T 1pmi_A 432 TTYRAF 437 (440)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555443
No 176
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=86.85 E-value=2.1 Score=36.45 Aligned_cols=69 Identities=12% Similarity=0.031 Sum_probs=47.7
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
..+.+..+.|+||+....-..++..-++||++|++.+. |+ .+++||.+++..+..-.+.+ .+++.++.+
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-----g~----~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll~ 226 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-----GV----KASTSDGLAIWDEQAISIHA--DSDSEVLLF 226 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-----TE----EEETTCEEEEESCSCEEEEE--SSSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-----CE----EeCCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 36788899999998653333344467899999998762 43 68999999998765444544 245665543
No 177
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=86.44 E-value=1.2 Score=40.64 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=42.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQ 162 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~ 162 (240)
.+++.++++.++... ..+ +...+++|++|++++.. +++ +..+++||.+++|++..-+.
T Consensus 323 ~F~v~~~~l~~~~~~--~~~-~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~fvpa~~~~~~ 380 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQ-HSAAILFCVEGEAVLRK---DEQ--RLVLKPGESAFIGADESPVN 380 (394)
T ss_dssp SCEEEEEECCSSCEE--ECC-SSCEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECGGGCCEE
T ss_pred EEEEEEEEEcCCeEE--ecC-CCcEEEEEEeceEEEEE---CCe--EEEEccCcEEEEeCCCceEE
Confidence 577888888755321 233 45799999999998764 244 56899999999999864443
No 178
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=86.33 E-value=7.6 Score=33.84 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=49.3
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~ 175 (240)
..+.+..+.|++|+.......+...-++||++|++.+. +. .. ...+.++.++++..|..-.+.+.+++++.++.+
T Consensus 167 ~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~-~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl 241 (290)
T 1j1l_A 167 TPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD-DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLI 241 (290)
T ss_dssp SCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT-TS--CEEECTTEEEEECSCSEEEEECCSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc-cc--ceeccCceEEEecCCCEEEEEEcCCCCcEEEEE
Confidence 46888899999998653333334468899999999763 11 10 135667777777777655555544567776643
Q ss_pred E
Q 045405 176 F 176 (240)
Q Consensus 176 ~ 176 (240)
-
T Consensus 242 ~ 242 (290)
T 1j1l_A 242 A 242 (290)
T ss_dssp E
T ss_pred E
Confidence 3
No 179
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=85.73 E-value=3.7 Score=35.19 Aligned_cols=71 Identities=21% Similarity=0.103 Sum_probs=47.4
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
..+.+..+.|+||+....-..++. -++||++|++.+. +.++. ...+++||.+++..+..-.+.+ .++++++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a--~~~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVA--DSPLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEE--SSSEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 367788899999986543333343 7899999998875 11112 3579999999997665444444 2455554
No 180
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=84.03 E-value=4.6 Score=34.96 Aligned_cols=70 Identities=10% Similarity=0.043 Sum_probs=47.3
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCC-C----CeEEEEecCCCCE
Q 045405 96 QGVALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPR-A----LVHFQLNVGNEPA 170 (240)
Q Consensus 96 ~gls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~-G----~~H~~~N~G~~~a 170 (240)
..+.+..+.|++|+.......+...-++||++|++.+. |. ...+++||.+++.. | ..-.+.+. +++
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~a 235 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----AD--NIEGKAGQALFFSRHNRGEETELNVTAR--EKL 235 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TT--TEEEETTEEEEECCCCTTCEEEEEEEES--SSE
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--CCc
Confidence 46889999999999654333334467999999998762 31 13689999999985 5 33334442 356
Q ss_pred EEEE
Q 045405 171 TFIP 174 (240)
Q Consensus 171 ~~i~ 174 (240)
.++.
T Consensus 236 ~~Ll 239 (277)
T 2p17_A 236 RLLL 239 (277)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 181
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=82.30 E-value=3.5 Score=30.28 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=37.7
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~ 152 (240)
+....+++|..+-.. ...+..+.+|++|++++...+++|+ .....+.+||++
T Consensus 28 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFHE-GDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEECT-TSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEECC-CCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 346778888765322 2234789999999999998877664 345688999987
No 182
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=82.25 E-value=3.7 Score=35.92 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=41.3
Q ss_pred ceEEEEEEEcCCcccCCccCCCCC-eEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEE
Q 045405 97 GVALFRIDLDVGGINPPHTHPRGT-EAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQL 163 (240)
Q Consensus 97 gls~~~v~l~pGg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~ 163 (240)
-+++.++++.+.... .. +.. .++.|++| +++.. +++ ...+++||.+++|++...+..
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceEEE
Confidence 467888888743222 23 557 89999999 88765 344 458999999999999865544
No 183
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=81.45 E-value=2.7 Score=30.69 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=33.7
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EE---EEEECCCCEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FF---SKVLTPGKVFL 153 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~---~~~l~~GDv~v 153 (240)
+....+++|..+-. -...+..+.+|++|++++...+++|+ .. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFK-ENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEe-CCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 45677888875422 22345799999999999987776664 23 46789999874
No 184
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=80.33 E-value=24 Score=29.24 Aligned_cols=111 Identities=17% Similarity=0.132 Sum_probs=67.1
Q ss_pred eEEEEEEEcCCc-ccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECC----CC--EEEeCCCCeEEEEec-CCCC
Q 045405 98 VALFRIDLDVGG-INPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTP----GK--VFLIPRALVHFQLNV-GNEP 169 (240)
Q Consensus 98 ls~~~v~l~pGg-~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~----GD--v~v~P~G~~H~~~N~-G~~~ 169 (240)
.+....-|.++. ...+|-- +++|+.+-..|.....++.++|+..+.+|.+ |+ -++||+|........ +++-
T Consensus 79 ~TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~ 157 (203)
T 1xe7_A 79 STLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEF 157 (203)
T ss_dssp CEEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTT
T ss_pred eeEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCc
Confidence 345555677776 4534433 6899999999976666778888765666643 55 379999987766543 2222
Q ss_pred --EEEEEEEeCCCCCceeccchhhcCCCCCCHH-HHHhhcCCCHHHHHHHHhh
Q 045405 170 --ATFIPIFNTQNPGVSDSIGTLFDTTPPVPNE-VLTKSFRVGDDVINTIRAA 219 (240)
Q Consensus 170 --a~~i~~~~s~~Pg~~~~~~~lf~s~~~~p~~-vla~af~v~~~~v~~l~~~ 219 (240)
..+++.. -.||+..-...+ .+.+ -|.+-|- ++.++.|+..
T Consensus 158 ~~~tLVgCt--VaPGFdF~dFel------~~~~~~L~~~~P--~~~~~~l~~l 200 (203)
T 1xe7_A 158 DNGFLISEV--VVPGFDFEDHTF------LKGEDELKHLVG--PEKAAELAFL 200 (203)
T ss_dssp TTCEEEEEE--ESSCCCGGGEEE------CCHHHHHHHHHC--HHHHHHTGGG
T ss_pred ccceEEEEE--ecCCccchhcEe------cCCcHHHHHHCC--HHHHHHHHHH
Confidence 2344322 357765533222 3455 5555553 7777777643
No 185
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=79.93 E-value=5.5 Score=30.96 Aligned_cols=52 Identities=6% Similarity=-0.130 Sum_probs=38.1
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFL 153 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v 153 (240)
....+++|..+-. -...+..+.+|++|.+++...+++|+ .....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~-~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLK-TGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEEC-CCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 4667788875422 22335789999999999999888775 3345789999985
No 186
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=79.28 E-value=2.4 Score=31.73 Aligned_cols=55 Identities=16% Similarity=-0.019 Sum_probs=41.6
Q ss_pred EEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEe
Q 045405 104 DLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLN 164 (240)
Q Consensus 104 ~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N 164 (240)
.+.||- -+....+.|+.-|++|++++.+- |...++.+++|+.|.+|++.-.-++.
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~Lp---G~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAE---GANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECT---TCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECC---CCccCEEECCCCEEEECCCCcEEEEE
Confidence 345553 34556689999999999999874 32237899999999999998766654
No 187
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=78.90 E-value=6.1 Score=31.15 Aligned_cols=128 Identities=16% Similarity=0.105 Sum_probs=80.1
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeC-----CCCeEEEEecCCCCEEEEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIP-----RALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P-----~G~~H~~~N~G~~~a~~i~ 174 (240)
....+++|..+-.. ......+++|++|.+++...+++|+ .....+.+||++=.. .-..+..... ++..++.
T Consensus 23 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~--~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQ-GDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAV--EDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECT-TCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEES--SSEEEEE
T ss_pred eEEEeCCCCEEEeC-CCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEc--CCEEEEE
Confidence 45677888754322 2235789999999999999877775 345688999998321 1122334443 3455443
Q ss_pred EEe-------CCCCCcee----------------------------ccchhh---cCC----CCCCHHHHHhhcCCCHHH
Q 045405 175 IFN-------TQNPGVSD----------------------------SIGTLF---DTT----PPVPNEVLTKSFRVGDDV 212 (240)
Q Consensus 175 ~~~-------s~~Pg~~~----------------------------~~~~lf---~s~----~~~p~~vla~af~v~~~~ 212 (240)
+-. ..+|.... +...+. ... ..++.+-+|...|++++.
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 321 12442110 111111 110 147999999999999999
Q ss_pred HHHHHhhcCCCceEEecCC
Q 045405 213 INTIRAARAQSSWINILDG 231 (240)
Q Consensus 213 v~~l~~~~~~~~~i~~~~~ 231 (240)
+.++.+.....+.|...++
T Consensus 180 vsR~l~~l~~~g~I~~~~~ 198 (216)
T 4ev0_A 180 VSRVLHALAEEGVVRLGPG 198 (216)
T ss_dssp HHHHHHHHHHTTSEEEETT
T ss_pred HHHHHHHHHHCCCEEecCC
Confidence 9999999888888876543
No 188
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=78.88 E-value=6.1 Score=30.91 Aligned_cols=128 Identities=9% Similarity=0.062 Sum_probs=78.7
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeCC----C-----CeEEEEecCCCCE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIPR----A-----LVHFQLNVGNEPA 170 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P~----G-----~~H~~~N~G~~~a 170 (240)
....+++|..+-. -...+..+++|++|.+++...+++|+ .....+.+||++-... . ..+..... ++.
T Consensus 14 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~--~~~ 90 (207)
T 2oz6_A 14 HRRRYTAKSTIIY-AGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAK--VEC 90 (207)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEES--SCE
T ss_pred ceEEECCCCEEEc-CCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEEC--CcE
Confidence 3567778875422 22235789999999999998887775 3456789999984321 1 22333333 344
Q ss_pred EEEEEEe-------CCCCCcee----------------------------ccchhh--cCC-----------CCCCHHHH
Q 045405 171 TFIPIFN-------TQNPGVSD----------------------------SIGTLF--DTT-----------PPVPNEVL 202 (240)
Q Consensus 171 ~~i~~~~-------s~~Pg~~~----------------------------~~~~lf--~s~-----------~~~p~~vl 202 (240)
.++.+=. ..+|.... ++..+. ... -.++.+-+
T Consensus 91 ~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~l 170 (207)
T 2oz6_A 91 EVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEI 170 (207)
T ss_dssp EEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHH
T ss_pred EEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceecccCHHHH
Confidence 4443221 12442110 001010 000 03789999
Q ss_pred HhhcCCCHHHHHHHHhhcCCCceEEecCC
Q 045405 203 TKSFRVGDDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 203 a~af~v~~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
|...|++.+.+.++.+.....+.|...++
T Consensus 171 A~~lg~sr~tvsR~l~~l~~~g~I~~~~~ 199 (207)
T 2oz6_A 171 GRIVGCSREMVGRVLKSLEEQGLVHVKGK 199 (207)
T ss_dssp HHHHTSCHHHHHHHHHHHHHTTSEEEETT
T ss_pred HHHhCCCHHHHHHHHHHHHHCCCEEecCC
Confidence 99999999999999998888888877653
No 189
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=78.19 E-value=20 Score=31.01 Aligned_cols=70 Identities=11% Similarity=0.101 Sum_probs=47.6
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECC--------CCEEEeCCCCeEEEEecCCCC
Q 045405 98 VALFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTP--------GKVFLIPRALVHFQLNVGNEP 169 (240)
Q Consensus 98 ls~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~--------GDv~v~P~G~~H~~~N~G~~~ 169 (240)
+++.+++|++|.......- +.+-.++.+.|++.+.+ +|+.+...-.+ .|.+++|+|.--.+...+ +
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~-~~E~~iv~l~G~~~V~~---~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~--~ 102 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSD-ERERCLVLVAGLASVXA---ADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET--D 102 (270)
T ss_dssp CEEEEEEECTTCEEEECCS-SEEEEEEEEESCEEEEE---TTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS--S
T ss_pred eEEEEEEecCCCEEEecCC-CcEEEEEEecceEEEEE---CCEEEeccccccccccCCCCcEEEECCCCEEEEEecC--C
Confidence 7788899999998766655 33444567889999887 35533221233 599999999965565543 5
Q ss_pred EEEE
Q 045405 170 ATFI 173 (240)
Q Consensus 170 a~~i 173 (240)
+++.
T Consensus 103 ~~~~ 106 (270)
T 2qjv_A 103 LELA 106 (270)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 6654
No 190
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=77.89 E-value=6.9 Score=31.13 Aligned_cols=128 Identities=9% Similarity=0.030 Sum_probs=80.2
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeC----CC--CeEEEEecCCCCEEEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIP----RA--LVHFQLNVGNEPATFI 173 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P----~G--~~H~~~N~G~~~a~~i 173 (240)
....+++|..+-.. ......+++|++|.+++...+++|+ .....+.+||++-.. .+ ..+..... +++.++
T Consensus 35 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v~ 111 (230)
T 3iwz_A 35 HRRRYPTRTDVFRP-GDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTR--TQCELA 111 (230)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEES--SCEEEE
T ss_pred eEEEeCCCCEEECC-CCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEc--CcEEEE
Confidence 46677888754322 2235789999999999998888775 345678999998432 22 22233333 344444
Q ss_pred EEEe-------CCC-----CCcee----------------------------ccchhh------cC--CC-----CCCHH
Q 045405 174 PIFN-------TQN-----PGVSD----------------------------SIGTLF------DT--TP-----PVPNE 200 (240)
Q Consensus 174 ~~~~-------s~~-----Pg~~~----------------------------~~~~lf------~s--~~-----~~p~~ 200 (240)
.+-. ..+ |.... ++..+. +. .+ .++.+
T Consensus 112 ~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~lt~~ 191 (230)
T 3iwz_A 112 EISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQ 191 (230)
T ss_dssp EEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHH
T ss_pred EEeHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhCCCCCCCceecCCCHH
Confidence 3221 235 53210 000011 00 00 37899
Q ss_pred HHHhhcCCCHHHHHHHHhhcCCCceEEecCC
Q 045405 201 VLTKSFRVGDDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 201 vla~af~v~~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
-+|.-.|++.+++.++.+.....+.|...++
T Consensus 192 ~lA~~lg~sr~tvsR~l~~L~~~g~I~~~~~ 222 (230)
T 3iwz_A 192 ELARLVGCSREMAGRVLKKLQADGLLHARGK 222 (230)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHTTSEEEETT
T ss_pred HHHHHhCCcHHHHHHHHHHHHHCCCEEECCC
Confidence 9999999999999999999888888887553
No 191
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=77.37 E-value=7 Score=31.26 Aligned_cols=125 Identities=10% Similarity=0.051 Sum_probs=77.9
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeCC-----CCeEEEEecCCCCEEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIPR-----ALVHFQLNVGNEPATFI 173 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P~-----G~~H~~~N~G~~~a~~i 173 (240)
+....+++|..+-.- -..+..+++|++|.+.+...+++|+ .....+.+||++=... -..+.... .+++.++
T Consensus 29 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~ 105 (231)
T 3e97_A 29 VTERNFQPDELVVEQ-DAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRA--LTPVRTL 105 (231)
T ss_dssp EEEEEECTTCBCCCT-TCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEE--SSCEEEE
T ss_pred cEEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEE--CCcEEEE
Confidence 456788888865332 2235789999999999998887775 3456889999873221 11223333 2344444
Q ss_pred EEEeC--------CCCCc---------------------------eeccch---------------hhcCCCCCCHHHHH
Q 045405 174 PIFNT--------QNPGV---------------------------SDSIGT---------------LFDTTPPVPNEVLT 203 (240)
Q Consensus 174 ~~~~s--------~~Pg~---------------------------~~~~~~---------------lf~s~~~~p~~vla 203 (240)
. ++. .+|.. ..+... .+.- .++.+-+|
T Consensus 106 ~-i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~--~~t~~~iA 182 (231)
T 3e97_A 106 M-LHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLYRQRLAAGVPQPEVL--PLGTQDIM 182 (231)
T ss_dssp E-ECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSTTEE--CCCHHHHH
T ss_pred E-EeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhcCCCCCCceEec--CCCHHHHH
Confidence 3 221 23321 111100 1111 47899999
Q ss_pred hhcCCCHHHHHHHHhhcCCCceEEecC
Q 045405 204 KSFRVGDDVINTIRAARAQSSWINILD 230 (240)
Q Consensus 204 ~af~v~~~~v~~l~~~~~~~~~i~~~~ 230 (240)
...|++.+++.++.+.....+.|...+
T Consensus 183 ~~lg~sr~tvsR~l~~L~~~g~I~~~~ 209 (231)
T 3e97_A 183 ARTSSSRETVSRVLKRLEAHNILEVSP 209 (231)
T ss_dssp HHHTCCHHHHHHHHHHHHHTTSEEECS
T ss_pred HHhCCcHHHHHHHHHHHHHCCcEEecC
Confidence 999999999999999888888887754
No 192
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=77.34 E-value=7.3 Score=30.51 Aligned_cols=128 Identities=9% Similarity=0.047 Sum_probs=79.7
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeC----CC--CeEEEEecCCCCEEEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIP----RA--LVHFQLNVGNEPATFI 173 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P----~G--~~H~~~N~G~~~a~~i 173 (240)
....+++|..+-.. ...+..+++|++|.+++...+++|+ .....+.+||++-.. .+ ..+..... ++..++
T Consensus 20 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v~ 96 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQ-GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACEVA 96 (210)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEES--SCEEEE
T ss_pred EEEEeCCCCEEECC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEEC--CcEEEE
Confidence 35677787754222 2235789999999999998887775 345678999998422 11 22333443 445554
Q ss_pred EEEe-------CCCCCcee----------------------------ccchhh--cCC-----------CCCCHHHHHhh
Q 045405 174 PIFN-------TQNPGVSD----------------------------SIGTLF--DTT-----------PPVPNEVLTKS 205 (240)
Q Consensus 174 ~~~~-------s~~Pg~~~----------------------------~~~~lf--~s~-----------~~~p~~vla~a 205 (240)
.+-. ..+|.... +...+. ... -.++.+-+|..
T Consensus 97 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~~ 176 (210)
T 3ryp_A 97 EISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQI 176 (210)
T ss_dssp EEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHHH
T ss_pred EEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHHH
Confidence 3321 13453210 000010 000 04788999999
Q ss_pred cCCCHHHHHHHHhhcCCCceEEecCC
Q 045405 206 FRVGDDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 206 f~v~~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
.|++.+++.++.+.....+.|...++
T Consensus 177 lg~sr~tvsR~l~~L~~~g~I~~~~~ 202 (210)
T 3ryp_A 177 VGCSRETVGRILKMLEDQNLISAHGK 202 (210)
T ss_dssp HTCCHHHHHHHHHHHHHTTSEEEETT
T ss_pred hCCcHHHHHHHHHHHHHCCcEEeCCC
Confidence 99999999999998888888887554
No 193
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=77.17 E-value=6.4 Score=31.64 Aligned_cols=129 Identities=12% Similarity=0.116 Sum_probs=78.6
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeC-----CCCeEEEEecCCCCEEEEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIP-----RALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P-----~G~~H~~~N~G~~~a~~i~ 174 (240)
....+++|..+-.- ...+..+++|++|.+++...+++|+ .....+.+||++-.. .-..+..... ++..++.
T Consensus 35 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~--~~~~v~~ 111 (237)
T 3fx3_A 35 VWRSYDRGETLFLQ-EEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAV--TPCEVMH 111 (237)
T ss_dssp EEEEECTTCEEECT-TSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEES--SSEEEEE
T ss_pred EEEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEEC--CceEEEE
Confidence 45677888764222 2235789999999999999887775 345678999988321 1122333333 3444443
Q ss_pred EEe-------CCCCCcee----------------------------ccchh------------hcCCCCCCHHHHHhhcC
Q 045405 175 IFN-------TQNPGVSD----------------------------SIGTL------------FDTTPPVPNEVLTKSFR 207 (240)
Q Consensus 175 ~~~-------s~~Pg~~~----------------------------~~~~l------------f~s~~~~p~~vla~af~ 207 (240)
+-. ..+|.... +...+ +. -.++.+.+|...|
T Consensus 112 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~~~~~--l~~t~~~iA~~lg 189 (237)
T 3fx3_A 112 IPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDCDTGACEVT--LPYDKMLIAGRLG 189 (237)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-----EEE--CCSCTHHHHHHTT
T ss_pred EcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCCeEEE--ecCCHHHHHHHhC
Confidence 221 12342110 00011 11 1345889999999
Q ss_pred CCHHHHHHHHhhcCCCceEEecCCeeeec
Q 045405 208 VGDDVINTIRAARAQSSWINILDGRSISF 236 (240)
Q Consensus 208 v~~~~v~~l~~~~~~~~~i~~~~~~~~~~ 236 (240)
++.+.+.++.+.....+ | ..+++++-.
T Consensus 190 ~sr~tvsR~l~~L~~~g-i-~~~~~~i~I 216 (237)
T 3fx3_A 190 MKPESLSRAFSRLKAAG-V-TVKRNHAEI 216 (237)
T ss_dssp CCHHHHHHHHHHHGGGT-E-ECCTTEEEE
T ss_pred CCHHHHHHHHHHHHHCC-e-EeeCCEEEE
Confidence 99999999999888777 4 355666543
No 194
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=77.02 E-value=8.3 Score=30.72 Aligned_cols=125 Identities=15% Similarity=0.245 Sum_probs=79.3
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEe-----CCCCeEEEEecCCCCEEEEEE
Q 045405 102 RIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLI-----PRALVHFQLNVGNEPATFIPI 175 (240)
Q Consensus 102 ~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~-----P~G~~H~~~N~G~~~a~~i~~ 175 (240)
...+++|..+-. --..+..+++|++|.+.+...+++|+ .....+.+||++=. .....+..... ++..++.+
T Consensus 31 ~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~~i 107 (227)
T 3d0s_A 31 PVDFPRGHTVFA-EGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAVSM 107 (227)
T ss_dssp EEEECTTCEEEC-TTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEEEE
T ss_pred EEEeCCCCEEEc-CCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEEEE
Confidence 567778775422 22235789999999999998887775 34568899998832 12223344443 34454432
Q ss_pred Ee-------CCCCCcee----------------------------ccchh----------------hcCCCCCCHHHHHh
Q 045405 176 FN-------TQNPGVSD----------------------------SIGTL----------------FDTTPPVPNEVLTK 204 (240)
Q Consensus 176 ~~-------s~~Pg~~~----------------------------~~~~l----------------f~s~~~~p~~vla~ 204 (240)
-. ..+|.... ++..+ +.- .++.+-||.
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~--~~t~~~lA~ 185 (227)
T 3d0s_A 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTH--DLTQEEIAQ 185 (227)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEEC--CCCHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcC--CCCHHHHHH
Confidence 21 23442110 00001 111 489999999
Q ss_pred hcCCCHHHHHHHHhhcCCCceEEecCC
Q 045405 205 SFRVGDDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 205 af~v~~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
..|++.+++.++.+.+...+.|...++
T Consensus 186 ~lg~sr~tvsR~l~~l~~~g~I~~~~~ 212 (227)
T 3d0s_A 186 LVGASRETVNKALADFAHRGWIRLEGK 212 (227)
T ss_dssp HHTSCHHHHHHHHHHHHHTTSEEEETT
T ss_pred HhCCcHHHHHHHHHHHHHCCCEEecCC
Confidence 999999999999998887888877553
No 195
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=75.91 E-value=7.6 Score=30.39 Aligned_cols=52 Identities=12% Similarity=-0.057 Sum_probs=38.4
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~ 152 (240)
+....+++|..+-.- -..+..+.+|++|++++...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~-G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTE-GDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 456778888764322 2345799999999999999887775 345678999987
No 196
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=75.74 E-value=7.4 Score=30.40 Aligned_cols=124 Identities=10% Similarity=-0.027 Sum_probs=73.8
Q ss_pred EEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEe---CC-CCeEEEEecCCCCEEEEEEEeC
Q 045405 104 DLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLI---PR-ALVHFQLNVGNEPATFIPIFNT 178 (240)
Q Consensus 104 ~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~---P~-G~~H~~~N~G~~~a~~i~~~~s 178 (240)
.+++|..+-.- ...+..+++|++|.+++...+++|+ .....+.+||++=. .. -..+..... ++..++. ++.
T Consensus 3 ~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~--~~~~v~~-i~~ 78 (195)
T 3b02_A 3 RFARKETIYLR-GEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAM--TEAVVQG-LEP 78 (195)
T ss_dssp EECTTCEEECT-TSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEES--SSEEEEE-ECG
T ss_pred EcCCCCEEECC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEEC--CcEEEEE-EcH
Confidence 45566543221 2234689999999999998877775 34568899998843 11 112233332 3444443 221
Q ss_pred CC--CCce----------------------------eccchh------hcC-------CCCCCHHHHHhhcCCCHHHHHH
Q 045405 179 QN--PGVS----------------------------DSIGTL------FDT-------TPPVPNEVLTKSFRVGDDVINT 215 (240)
Q Consensus 179 ~~--Pg~~----------------------------~~~~~l------f~s-------~~~~p~~vla~af~v~~~~v~~ 215 (240)
.. |... .++..+ ++. ...++.+.||...|++.+++.+
T Consensus 79 ~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR 158 (195)
T 3b02_A 79 RAMDHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGIYVTVSHEEIADATASIRESVSK 158 (195)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHTTTSCHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCeeeccCCHHHHHHHhCCCHHHHHH
Confidence 11 2110 001111 110 0147899999999999999999
Q ss_pred HHhhcCCCceEEecCC
Q 045405 216 IRAARAQSSWINILDG 231 (240)
Q Consensus 216 l~~~~~~~~~i~~~~~ 231 (240)
+.+.+...+.|...++
T Consensus 159 ~l~~L~~~g~I~~~~~ 174 (195)
T 3b02_A 159 VLADLRREGLIATAYR 174 (195)
T ss_dssp HHHHHHHHTSEEEETT
T ss_pred HHHHHHHCCCEEecCC
Confidence 9888887777776654
No 197
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=74.07 E-value=9.5 Score=31.01 Aligned_cols=128 Identities=11% Similarity=0.099 Sum_probs=79.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeC---CCCe----EEEEecCCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIP---RALV----HFQLNVGNEPAT 171 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P---~G~~----H~~~N~G~~~a~ 171 (240)
+....+++|..+-.- -..+..+++|++|.+++...+++|+ .....+.+||++-.. .+.. ...... ++++
T Consensus 43 ~~~~~~~~ge~i~~~-G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~--~~~~ 119 (243)
T 3la7_A 43 PVVETFERNKTIFFP-GDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAF--TPVE 119 (243)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEES--SSEE
T ss_pred heeEEECCCCEEEcC-CCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEc--cceE
Confidence 446778888865322 2235789999999999999888775 345678999987321 1111 223332 4455
Q ss_pred EEEEEe-------CCCCCcee----------------------------ccchh------hc----C----CCCCCHHHH
Q 045405 172 FIPIFN-------TQNPGVSD----------------------------SIGTL------FD----T----TPPVPNEVL 202 (240)
Q Consensus 172 ~i~~~~-------s~~Pg~~~----------------------------~~~~l------f~----s----~~~~p~~vl 202 (240)
++.+=. ..+|.... ++..+ ++ . ...++.+.|
T Consensus 120 v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~lt~~~l 199 (243)
T 3la7_A 120 LLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAI 199 (243)
T ss_dssp EEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEECSCCCHHHH
T ss_pred EEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEeccCCHHHH
Confidence 443321 23442110 00001 00 0 115789999
Q ss_pred HhhcCCCHHHHHHHHhhcCCCceEEecC
Q 045405 203 TKSFRVGDDVINTIRAARAQSSWINILD 230 (240)
Q Consensus 203 a~af~v~~~~v~~l~~~~~~~~~i~~~~ 230 (240)
|...|++.+.+.++.+.....+.|...+
T Consensus 200 A~~lG~sr~tvsR~l~~L~~~GlI~~~~ 227 (243)
T 3la7_A 200 AEAIGSTRVTVTRLLGDLREKKMISIHK 227 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHCCcHHHHHHHHHHHHHCCCEEEcC
Confidence 9999999999999999888777777654
No 198
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=74.07 E-value=3.2 Score=30.72 Aligned_cols=52 Identities=15% Similarity=0.078 Sum_probs=34.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeE-EEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTF-FSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~-~~~~l~~GDv~ 152 (240)
+....+++|..+-.--. .+..+++|++|++++...+++|+. ....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 45667888876533222 357899999999999877666642 34578899987
No 199
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=73.25 E-value=6.8 Score=31.15 Aligned_cols=128 Identities=15% Similarity=0.130 Sum_probs=47.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEe----CC--CCeEEEEecCCCCEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLI----PR--ALVHFQLNVGNEPATF 172 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~----P~--G~~H~~~N~G~~~a~~ 172 (240)
+....+++|..+-.. ...+..+++|++|.+++...+++|+ .....+.+||++-. -. ...+..... ++..+
T Consensus 22 ~~~~~~~~g~~i~~~-G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~--~~~~v 98 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQ-DDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAG--ENSKI 98 (213)
T ss_dssp SEEEEECTTCEEECT-TCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEES--SSEEE
T ss_pred cEEEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEc--cceEE
Confidence 346678888764322 2235789999999999998887775 34567899998732 21 123344443 34444
Q ss_pred EEEEe-------CCCCCce----------------------------eccchhhc-------CCCCCCHHHHHhhcCCCH
Q 045405 173 IPIFN-------TQNPGVS----------------------------DSIGTLFD-------TTPPVPNEVLTKSFRVGD 210 (240)
Q Consensus 173 i~~~~-------s~~Pg~~----------------------------~~~~~lf~-------s~~~~p~~vla~af~v~~ 210 (240)
+.+=. ..+|... .++..+.. -...++.+.||...|++.
T Consensus 99 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~g~~~~~~t~~~lA~~lg~sr 178 (213)
T 1o5l_A 99 LSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTLREKLMNFLVRHMNEKRELTLPVTLEELSRLFGCAR 178 (213)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------------------------
T ss_pred EEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccCCcccCCCCHHHHHHHhCCCH
Confidence 43221 1234221 01111110 001478899999999999
Q ss_pred HHHHHHHhhcCCCceEEecC
Q 045405 211 DVINTIRAARAQSSWINILD 230 (240)
Q Consensus 211 ~~v~~l~~~~~~~~~i~~~~ 230 (240)
+.+.++.++....+.|...+
T Consensus 179 ~tvsR~l~~L~~~G~I~~~~ 198 (213)
T 1o5l_A 179 PALSRVFQELEREGYIEKHG 198 (213)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHHCCeEEEcC
Confidence 99999999888778777654
No 200
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=73.09 E-value=10 Score=28.45 Aligned_cols=51 Identities=14% Similarity=0.102 Sum_probs=36.2
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~ 152 (240)
+....+++|..+-- -...+..+++|++|++.+.. +.+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVID-QGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEEC-TTSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEe-CCCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 44577888876422 23346789999999999988 55664 344578899966
No 201
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=72.74 E-value=10 Score=30.86 Aligned_cols=129 Identities=9% Similarity=0.034 Sum_probs=80.7
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeE-EEEEECCCCEEEe--CCCCeEEEEecCCCCEEEEEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTF-FSKVLTPGKVFLI--PRALVHFQLNVGNEPATFIPIF 176 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~-~~~~l~~GDv~v~--P~G~~H~~~N~G~~~a~~i~~~ 176 (240)
.....+++|..+-.- -..+..+++|++|.+++...+++|+. ....+.+||++-. .....+..... ++..++.+-
T Consensus 32 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~--~~~~v~~i~ 108 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMP-GEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAM--EPTRTCWFS 108 (250)
T ss_dssp SEEEEECTTCEEECT-TCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEES--SSEEEEEEC
T ss_pred CeEEEECCCCEEECC-CCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEc--ccEEEEEEc
Confidence 346677788764322 22357899999999999998887753 4567899999843 22223333332 344444321
Q ss_pred e-------CCCCCcee----------------------------ccchh------hcC--------CCCCCHHHHHhhcC
Q 045405 177 N-------TQNPGVSD----------------------------SIGTL------FDT--------TPPVPNEVLTKSFR 207 (240)
Q Consensus 177 ~-------s~~Pg~~~----------------------------~~~~l------f~s--------~~~~p~~vla~af~ 207 (240)
. ..+|.... ++..+ ++. ...++.+-+|...|
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG 188 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITG 188 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhC
Confidence 1 12452110 00001 110 01589999999999
Q ss_pred CCHHHHHHHHhhcCCCceEEecCC
Q 045405 208 VGDDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 208 v~~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
++.+++.++.+.....+.|...++
T Consensus 189 ~sr~tvsR~l~~L~~~g~I~~~~~ 212 (250)
T 3e6c_C 189 VHHVTVSRVLASLKRENILDKKKN 212 (250)
T ss_dssp CCHHHHHHHHHHHHHTTSEEECSS
T ss_pred CcHHHHHHHHHHHHHCCCeEeCCC
Confidence 999999999998888888887654
No 202
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=72.63 E-value=10 Score=31.33 Aligned_cols=129 Identities=9% Similarity=0.039 Sum_probs=80.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeCC----C--CeEEEEecCCCCEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIPR----A--LVHFQLNVGNEPATF 172 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P~----G--~~H~~~N~G~~~a~~ 172 (240)
+....+++|..+-.- -.....+++|++|.+++...+++|+ .....+.+||++=... . ........ +++.+
T Consensus 69 ~~~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~--~~~~l 145 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQ-GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACEV 145 (260)
T ss_dssp SEEEEECTTCEEECT-TCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEES--SCEEE
T ss_pred CEEEEECCCCEEECC-CCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEEC--CCeEE
Confidence 356778888864222 2235789999999999998887775 3456789999984321 1 22333443 34454
Q ss_pred EEEEe-------CCCCCcee----------------------------ccchhh--cCC-----------CCCCHHHHHh
Q 045405 173 IPIFN-------TQNPGVSD----------------------------SIGTLF--DTT-----------PPVPNEVLTK 204 (240)
Q Consensus 173 i~~~~-------s~~Pg~~~----------------------------~~~~lf--~s~-----------~~~p~~vla~ 204 (240)
+.+-. ..+|.... ++..+. ... -.++.+-||.
T Consensus 146 ~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA~ 225 (260)
T 3kcc_A 146 AEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQ 225 (260)
T ss_dssp EEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHHH
T ss_pred EEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHHH
Confidence 43221 13453211 000010 000 0378899999
Q ss_pred hcCCCHHHHHHHHhhcCCCceEEecCC
Q 045405 205 SFRVGDDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 205 af~v~~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
..|++.+++.++.+.....+.|...++
T Consensus 226 ~lG~sr~tvsR~l~~L~~~GlI~~~~~ 252 (260)
T 3kcc_A 226 IVGCSRETVGRILKMLEDQNLISAHGK 252 (260)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEECSS
T ss_pred HhCCCHHHHHHHHHHHHHCCCEEEcCC
Confidence 999999999999999988888887543
No 203
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=71.75 E-value=6.6 Score=31.67 Aligned_cols=129 Identities=10% Similarity=-0.003 Sum_probs=79.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEe----CCC--CeEEEEecCCCCEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLI----PRA--LVHFQLNVGNEPATF 172 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~----P~G--~~H~~~N~G~~~a~~ 172 (240)
+....+++|..+-.- -..+..+++|++|.+++...+++|+ .....+.+||++=. ... ..+..... +++++
T Consensus 43 ~~~~~~~~ge~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKS-GNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEEE
T ss_pred cEEEEECCCCEEECC-CCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceEE
Confidence 456778888865322 2235789999999999988877664 34567899998732 221 23444443 34454
Q ss_pred EEEEe-------CCCCCcee----------------------------ccchhhc--CCC------CCCHHHHHhhcCCC
Q 045405 173 IPIFN-------TQNPGVSD----------------------------SIGTLFD--TTP------PVPNEVLTKSFRVG 209 (240)
Q Consensus 173 i~~~~-------s~~Pg~~~----------------------------~~~~lf~--s~~------~~p~~vla~af~v~ 209 (240)
+.+-. ..+|.... ++..+.. ..+ .++.+.||...|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 43221 13442110 0111111 001 37899999999999
Q ss_pred HHHHHHHHhhcCCCceEEecCC
Q 045405 210 DDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 210 ~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
.+.+.++.+.....+.|...++
T Consensus 200 r~tvsR~l~~l~~~glI~~~~~ 221 (232)
T 1zyb_A 200 RLNISKTLNELQDNGLIELHRK 221 (232)
T ss_dssp HHHHHHHHHHHHHTTSCEEETT
T ss_pred hhHHHHHHHHHHHCCCEEecCC
Confidence 9999999988887777776543
No 204
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=71.41 E-value=3.1 Score=37.95 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=27.2
Q ss_pred EEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEe
Q 045405 142 FSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFN 177 (240)
Q Consensus 142 ~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~ 177 (240)
++..-++||.++||+|.+|.+.|..+.-.+..-+++
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~s 328 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVS 328 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECC
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcC
Confidence 466779999999999999999998754333333343
No 205
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=71.19 E-value=20 Score=28.41 Aligned_cols=127 Identities=11% Similarity=-0.018 Sum_probs=80.1
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeE-EEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEe-
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTF-FSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFN- 177 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~-~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~- 177 (240)
+....+++|..+-.- ...+..+++|++|.+++. .+++|+. ....+.+||++- ....+..... +++.++.+-.
T Consensus 23 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~ 96 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTG-EGDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIR 96 (222)
T ss_dssp CEEEEECTTCEEECT-TCCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHH
T ss_pred CcEEEECCCCEEECC-CCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHH
Confidence 346678888764222 223578999999999996 6666753 356789999987 3334444443 3455443221
Q ss_pred ------CCCCCcee----------------------------ccchh------hcC--------CCCCCHHHHHhhcCCC
Q 045405 178 ------TQNPGVSD----------------------------SIGTL------FDT--------TPPVPNEVLTKSFRVG 209 (240)
Q Consensus 178 ------s~~Pg~~~----------------------------~~~~l------f~s--------~~~~p~~vla~af~v~ 209 (240)
..+|.... ++..+ ++. ...++.+.+|...|++
T Consensus 97 ~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~s 176 (222)
T 1ft9_A 97 TFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSS 176 (222)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSC
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 13453211 00001 010 0147999999999999
Q ss_pred HHHHHHHHhhcCCCceEEecCCe
Q 045405 210 DDVINTIRAARAQSSWINILDGR 232 (240)
Q Consensus 210 ~~~v~~l~~~~~~~~~i~~~~~~ 232 (240)
.+++.++.+.....+.|...+++
T Consensus 177 r~tvsR~l~~L~~~g~I~~~~~~ 199 (222)
T 1ft9_A 177 RQTTSTALNSLIKEGYISRQGRG 199 (222)
T ss_dssp HHHHHHHHHHHHHTTSSEECSTT
T ss_pred HHHHHHHHHHHHHCCcEEEcCCc
Confidence 99999999888877777776654
No 206
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=71.14 E-value=6.7 Score=31.41 Aligned_cols=129 Identities=11% Similarity=0.045 Sum_probs=76.6
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeC-----CCCeEEEEecCCCCEEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIP-----RALVHFQLNVGNEPATFI 173 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P-----~G~~H~~~N~G~~~a~~i 173 (240)
.....+++|..+-.- ......+++|++|.+++...+++|+ .....+.+||++=.. ....+..... ++..++
T Consensus 33 ~~~~~~~~g~~i~~~-g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSE-GDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAV--ENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECT-TCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEES--SCEEEE
T ss_pred CeEEEECCCCEEEeC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEe--cceEEE
Confidence 456778888764322 2235789999999999988776664 345688999987321 1223344443 344544
Q ss_pred EEEe-------CCCCCcee----------------------------ccchh------hcC-------CCCCCHHHHHhh
Q 045405 174 PIFN-------TQNPGVSD----------------------------SIGTL------FDT-------TPPVPNEVLTKS 205 (240)
Q Consensus 174 ~~~~-------s~~Pg~~~----------------------------~~~~l------f~s-------~~~~p~~vla~a 205 (240)
.+-. ..+|.... ++..+ ++. ...++.+-+|..
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~ 189 (232)
T 2gau_A 110 AIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATL 189 (232)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHHH
Confidence 3221 12342110 01111 110 115899999999
Q ss_pred cCCCHHHHHHHHhhcCCCceEEecCC
Q 045405 206 FRVGDDVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 206 f~v~~~~v~~l~~~~~~~~~i~~~~~ 231 (240)
.|++.+++.++.+.....+.|...++
T Consensus 190 lg~sr~tvsR~l~~l~~~g~I~~~~~ 215 (232)
T 2gau_A 190 SNMTVSNAIRTLSTFVSERMLALDGK 215 (232)
T ss_dssp TTSCHHHHHHHHHHHHHTTSEEEETT
T ss_pred hCCCHHHHHHHHHHHHHCCCEeeCCC
Confidence 99999999999998887888877654
No 207
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=71.09 E-value=10 Score=29.72 Aligned_cols=125 Identities=14% Similarity=0.194 Sum_probs=76.9
Q ss_pred EEEEcCCcccCCccCCCC--CeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEe----CCCCeEEEEecCCCCEEEEE
Q 045405 102 RIDLDVGGINPPHTHPRG--TEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLI----PRALVHFQLNVGNEPATFIP 174 (240)
Q Consensus 102 ~v~l~pGg~~~pH~Hp~a--~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~----P~G~~H~~~N~G~~~a~~i~ 174 (240)
...+++|..+-.. .... ..+++|++|.+.+...+++|+ .....+.+||++-. .....+..... ++..++.
T Consensus 7 ~~~~~~g~~i~~~-g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v~~ 83 (202)
T 2zcw_A 7 TVSFKAGDVILYP-GVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRLEP 83 (202)
T ss_dssp CEEECTTCEEECS-BSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEEEE
T ss_pred EEEECCCCEEECC-CCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEEEE
Confidence 4567777754221 2234 578999999999998887775 34567899998743 12223344443 4555555
Q ss_pred EEeCC-CCCcee----------------------------ccchhhc--C-----------CCCCCHHHHHhhcCCCHHH
Q 045405 175 IFNTQ-NPGVSD----------------------------SIGTLFD--T-----------TPPVPNEVLTKSFRVGDDV 212 (240)
Q Consensus 175 ~~~s~-~Pg~~~----------------------------~~~~lf~--s-----------~~~~p~~vla~af~v~~~~ 212 (240)
+ ... .|.... ++..+.. . ...++.+.||...|++.+.
T Consensus 84 i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 84 L-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRET 162 (202)
T ss_dssp C-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHH
T ss_pred E-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHH
Confidence 4 321 131100 0001100 0 0147899999999999999
Q ss_pred HHHHHhhcCCCceEEecC
Q 045405 213 INTIRAARAQSSWINILD 230 (240)
Q Consensus 213 v~~l~~~~~~~~~i~~~~ 230 (240)
+.++.+.....+.|...+
T Consensus 163 vsR~l~~L~~~g~I~~~~ 180 (202)
T 2zcw_A 163 VTKVIGELAREGYIRSGY 180 (202)
T ss_dssp HHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHHHHCCCEEeCC
Confidence 999999888778887654
No 208
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=71.00 E-value=9 Score=30.99 Aligned_cols=126 Identities=12% Similarity=0.024 Sum_probs=77.4
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEE-EEEECCCCEEEeCC---CC----eEEEEecCCCCEEEE
Q 045405 102 RIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFF-SKVLTPGKVFLIPR---AL----VHFQLNVGNEPATFI 173 (240)
Q Consensus 102 ~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~-~~~l~~GDv~v~P~---G~----~H~~~N~G~~~a~~i 173 (240)
...+++|..+-. --..+..+++|++|.+++...+++|+.. ...+ +||++-... +. .+...... ++.+++
T Consensus 20 ~~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFN-QWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEEC-TTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEe-CCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 456777775422 2223578999999999999888877533 3456 999985432 22 34444433 445544
Q ss_pred EEEeC--------CCCCcee----------------------------ccchh------hcC--------CC-CCCHHHH
Q 045405 174 PIFNT--------QNPGVSD----------------------------SIGTL------FDT--------TP-PVPNEVL 202 (240)
Q Consensus 174 ~~~~s--------~~Pg~~~----------------------------~~~~l------f~s--------~~-~~p~~vl 202 (240)
. ++. .+|.... ++..+ ++. .- .++.+.|
T Consensus 97 ~-i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~~~t~~~l 175 (238)
T 2bgc_A 97 V-IKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQEL 175 (238)
T ss_dssp E-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHEEEETTEEEECCSCCCHHHH
T ss_pred E-EeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCceEEEeccCCHHHH
Confidence 3 321 2442110 00111 110 11 4889999
Q ss_pred HhhcCCCH-HHHHHHHhhcCCCceEEecCC
Q 045405 203 TKSFRVGD-DVINTIRAARAQSSWINILDG 231 (240)
Q Consensus 203 a~af~v~~-~~v~~l~~~~~~~~~i~~~~~ 231 (240)
|...|++. +.+.++.+.+...+.|...++
T Consensus 176 A~~lG~sr~etvsR~l~~l~~~glI~~~~~ 205 (238)
T 2bgc_A 176 GYSSGIAHSSAVSRIISKLKQEKVIVYKNS 205 (238)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHTTSEEEETT
T ss_pred HHHhCCChHHHHHHHHHHHHHCCCEEecCC
Confidence 99999999 899999888887777777654
No 209
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=70.60 E-value=3.2 Score=36.32 Aligned_cols=45 Identities=20% Similarity=0.186 Sum_probs=34.2
Q ss_pred CCeEEEEee-CEEEEEEEccC-----------Ce------EEEEEECCCCEEEeCCCCeEEEE
Q 045405 119 GTEAGIVTR-GTVLVGLVTTN-----------NT------FFSKVLTPGKVFLIPRALVHFQL 163 (240)
Q Consensus 119 a~Ei~yVl~-G~~~v~~v~~~-----------g~------~~~~~l~~GDv~v~P~G~~H~~~ 163 (240)
-+|++|++. .++..|+.... ++ +....+++||.+++|+|.+|..-
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 379999999 56677764321 22 34678999999999999999974
No 210
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=70.06 E-value=39 Score=26.72 Aligned_cols=103 Identities=14% Similarity=0.025 Sum_probs=65.3
Q ss_pred CcCCceEEEecccCCCCCCccceEEEEEEEcCCcccCCccCC--CCCeEEEEeeCE-EEEEEEccCCeEEEEEE----CC
Q 045405 76 DVFKRAVTFGDVFGFPAVNTQGVALFRIDLDVGGINPPHTHP--RGTEAGIVTRGT-VLVGLVTTNNTFFSKVL----TP 148 (240)
Q Consensus 76 ~~~G~~v~~~~~~~~P~l~~~gls~~~v~l~pGg~~~pH~Hp--~a~Ei~yVl~G~-~~v~~v~~~g~~~~~~l----~~ 148 (240)
.+.||+.++.......+-+. -.+....-|.+|... |||- +++|+.+-..|. +++.+..++|...+.+| .+
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S--~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~ 95 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRS--HWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILE 95 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCE--EEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTT
T ss_pred CCCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCC--cceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCccc
Confidence 46788877766554333332 244555556777654 6663 589999999998 77888888775445555 45
Q ss_pred CCE--EEeCCCCeEEEEecCCCCEEEEEEEeCCCCCcee
Q 045405 149 GKV--FLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSD 185 (240)
Q Consensus 149 GDv--~v~P~G~~H~~~N~G~~~a~~i~~~~s~~Pg~~~ 185 (240)
|+. ++||+|........| ...+++.. -.||+..
T Consensus 96 Ge~pQ~vVP~G~WqaA~~~g--~~~LVsCt--VaPGF~f 130 (154)
T 1znp_A 96 GERPQVIVPANCWQSAESLG--DFTLVGCT--VSPGFAF 130 (154)
T ss_dssp TEESEEEECTTCEEEEEESS--SEEEEEEE--ESSCCCG
T ss_pred CcccEEEEcCCEEEEeeECC--CeEEEEEE--ecCCCcc
Confidence 664 799999877666543 34444332 3466543
No 211
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=69.29 E-value=10 Score=29.75 Aligned_cols=49 Identities=14% Similarity=0.134 Sum_probs=35.4
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+.||..+-.- -..+..+.+|++|++.+.. ++|+ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQE-GTFGDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECT-TSCCSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEEC-CCcCcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 456778888764322 2245789999999998875 5566 45789999987
No 212
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=68.99 E-value=11 Score=32.17 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=38.7
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+++|..+-. --..+..+++|++|.+++...+.+|+.....+.+||++
T Consensus 36 ~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLR-QGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEEC-TTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CeEEEECCCCEEEe-CCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 34567788775322 22235789999999999998888776566789999987
No 213
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=68.19 E-value=3.9 Score=36.09 Aligned_cols=45 Identities=16% Similarity=0.311 Sum_probs=31.4
Q ss_pred CCeEEEEeeC----EEEEEEEccC----------Ce----EEEEEECCCCEEEeCCCCeEEEE
Q 045405 119 GTEAGIVTRG----TVLVGLVTTN----------NT----FFSKVLTPGKVFLIPRALVHFQL 163 (240)
Q Consensus 119 a~Ei~yVl~G----~~~v~~v~~~----------g~----~~~~~l~~GDv~v~P~G~~H~~~ 163 (240)
-+|++|++.. ++.++.-... +. +....+++||.+++|+|.+|..-
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 5899999985 3444421100 00 13678999999999999999973
No 214
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=65.24 E-value=35 Score=26.79 Aligned_cols=127 Identities=12% Similarity=0.088 Sum_probs=81.4
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeCCCCeEEEEecCCCCEEEEEEEe-
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFN- 177 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i~~~~- 177 (240)
+....+++|..+-.- -..+..+++|++|.+++. .+++|+ .....+.+||++-.| ..+..... ++..++.+-.
T Consensus 27 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i~~~ 100 (220)
T 2fmy_A 27 FREQRYSKKAILYTP-NTERNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYTDIR 100 (220)
T ss_dssp SEEEEECTTCEEECT-TCSSCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEEEHH
T ss_pred hheeEeCCCCEEECC-CCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEEeHH
Confidence 346678888764222 223578999999999994 666665 345678999998773 23344443 4455543221
Q ss_pred ------CCCCCcee----------------------------ccc------h----------hhcCCCCCCHHHHHhhcC
Q 045405 178 ------TQNPGVSD----------------------------SIG------T----------LFDTTPPVPNEVLTKSFR 207 (240)
Q Consensus 178 ------s~~Pg~~~----------------------------~~~------~----------lf~s~~~~p~~vla~af~ 207 (240)
..+|.... ++. . .+. ..++.+.+|...|
T Consensus 101 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~--~~~t~~~lA~~lg 178 (220)
T 2fmy_A 101 NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLE--LGLNTEEIALMLG 178 (220)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEE--CSSCHHHHHHHHT
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEe--ccCCHHHHHHHhC
Confidence 13553110 000 0 011 1589999999999
Q ss_pred CCHHHHHHHHhhcCCCceEEec-CCeeee
Q 045405 208 VGDDVINTIRAARAQSSWINIL-DGRSIS 235 (240)
Q Consensus 208 v~~~~v~~l~~~~~~~~~i~~~-~~~~~~ 235 (240)
++.+++.++.+.+...+.|... ++ ++-
T Consensus 179 ~sr~tvsR~l~~l~~~g~I~~~~~~-~i~ 206 (220)
T 2fmy_A 179 TTRQTVSVLLNDFKKMGILERVNQR-TLL 206 (220)
T ss_dssp SCHHHHHHHHHHHHHTTSEEESSSS-EEE
T ss_pred CcHHHHHHHHHHHHHCCCEEEcCCC-EEE
Confidence 9999999999988888888886 44 443
No 215
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=64.24 E-value=21 Score=29.44 Aligned_cols=52 Identities=21% Similarity=0.162 Sum_probs=38.0
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCC--eEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN--TFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g--~~~~~~l~~GDv~ 152 (240)
+....+.+|..+-.. ...++.+++|++|++.+.....+| ......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQ-GEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeC-CccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 456788888765333 234578999999999998766555 2456789999988
No 216
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=63.89 E-value=10 Score=29.80 Aligned_cols=48 Identities=23% Similarity=0.179 Sum_probs=33.5
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+.||..+-..-. .+..+.+|++|++.+. .++|+ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~-~~~~ly~I~~G~v~v~--~~~g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGT-IGKKMYFIQHGVVSVL--TKGNK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEE--CTTSC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCC-cCCeEEEEeccEEEEE--ECCCe--EEEEcCCCEe
Confidence 45667888886533222 3578999999999875 35565 3478999987
No 217
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=60.91 E-value=7 Score=35.54 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=20.1
Q ss_pred EEEEECCCCEEEeCCCCeEEEEe
Q 045405 142 FSKVLTPGKVFLIPRALVHFQLN 164 (240)
Q Consensus 142 ~~~~l~~GDv~v~P~G~~H~~~N 164 (240)
....|++||.+++|+|.+|....
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcCC
Confidence 35789999999999999999754
No 218
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=56.23 E-value=35 Score=30.67 Aligned_cols=42 Identities=17% Similarity=0.057 Sum_probs=36.6
Q ss_pred eEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEE
Q 045405 121 EAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQL 163 (240)
Q Consensus 121 Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~ 163 (240)
--..|.+|++++.+..++|. .+..|+++|..++-+-+.|.+.
T Consensus 356 ~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 356 NHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE
T ss_pred ceEEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc
Confidence 34458999999999877665 7899999999999999999997
No 219
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=55.87 E-value=21 Score=31.85 Aligned_cols=54 Identities=20% Similarity=0.058 Sum_probs=39.6
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe---EEEEEECCCCEEEe
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT---FFSKVLTPGKVFLI 154 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~---~~~~~l~~GDv~v~ 154 (240)
+....+++|..+-. -...+..+++|++|++.+...+++|+ .....+.+||++=.
T Consensus 65 ~~~~~~~~g~~i~~-~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFR-QGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEe-CCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 44568888875422 23345789999999999998877763 45678999998844
No 220
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=55.22 E-value=17 Score=26.22 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=33.0
Q ss_pred EEEEEEc-CCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLD-VGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~-pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+. +|..+- +-...+..+++|++|++++.. .+|+. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIIL-EDGQELDSWYVILNGTVEISH--PDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEE-CTTCEECEEEECCBSCEEEEC--SSSCE--EEECTTCEE
T ss_pred heEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEEc--CCCcE--EEecCCCcc
Confidence 3456777 776542 223345789999999999773 55664 668999976
No 221
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=54.54 E-value=35 Score=27.25 Aligned_cols=77 Identities=22% Similarity=0.211 Sum_probs=51.7
Q ss_pred ceEEEEEEEc--CCcccCCccCCCCCeEEEEeeCEEEEEEEccCC------eEEEEEECCCCEEEeCCCCeEEEEecCCC
Q 045405 97 GVALFRIDLD--VGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNN------TFFSKVLTPGKVFLIPRALVHFQLNVGNE 168 (240)
Q Consensus 97 gls~~~v~l~--pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g------~~~~~~l~~GDv~v~P~G~~H~~~N~G~~ 168 (240)
++++.+..-. |-.+...=.||..+|.++-+.|...+-++.+++ ++.......|+-+..-+|..|.-.-.-++
T Consensus 53 ~i~ifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~ 132 (168)
T 1xsq_A 53 LISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQR 132 (168)
T ss_dssp EEEEEEECBCCSSCEEEEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSS
T ss_pred EEEEEEecCCCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCC
Confidence 3555544332 223334556888899999999987655555443 44567899999999999999996444345
Q ss_pred CEEEE
Q 045405 169 PATFI 173 (240)
Q Consensus 169 ~a~~i 173 (240)
+..++
T Consensus 133 ~~~F~ 137 (168)
T 1xsq_A 133 VTDFL 137 (168)
T ss_dssp CEEEE
T ss_pred cceEE
Confidence 55555
No 222
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=54.08 E-value=41 Score=24.80 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=34.1
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+++|..+-- -...+..+++|++|.+++.. +|+. ...+.+||++
T Consensus 61 ~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~---~~~~-~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQ-QGDEGDNFYVIDQGEMDVYV---NNEW-ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEEC-TTSCCCEEEEEEESCEEEEE---TTEE-EEEECTTCEE
T ss_pred ceEEEECCCCEEEe-CCCCCCeEEEEEecEEEEEE---CCEE-EEEecCCCEe
Confidence 44577888886532 22345899999999999876 3553 4578999986
No 223
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=53.09 E-value=61 Score=28.24 Aligned_cols=66 Identities=14% Similarity=0.252 Sum_probs=41.1
Q ss_pred EEEcCCcccCCccCCCCCeEE-EEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecC--CCCEEEE
Q 045405 103 IDLDVGGINPPHTHPRGTEAG-IVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVG--NEPATFI 173 (240)
Q Consensus 103 v~l~pGg~~~pH~Hp~a~Ei~-yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G--~~~a~~i 173 (240)
+.|+.|....-.+--...|+. +.+.|++.+.+ +|+ ++.|..-|.+++|+|......... ..++++.
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v---dg~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEI---DGA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 455555443333322335555 56788998887 466 458899999999999765544432 3455544
No 224
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=51.99 E-value=14 Score=33.01 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=25.0
Q ss_pred EEEEECCCCEEEeCCCCeEEEEecCCCCEEE
Q 045405 142 FSKVLTPGKVFLIPRALVHFQLNVGNEPATF 172 (240)
Q Consensus 142 ~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (240)
+..+=++||.+++++|..||..|.|-.-.+.
T Consensus 279 yr~~QkpGd~Vi~~PgayH~v~n~G~~~n~a 309 (332)
T 2xxz_A 279 YRFVQRPGDLVWINAGTVHWVQATGWCNNIA 309 (332)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeEEE
Confidence 3456699999999999999999999543433
No 225
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=51.67 E-value=38 Score=24.38 Aligned_cols=48 Identities=19% Similarity=0.253 Sum_probs=33.4
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+++|..+-. -...+..+.+|++|++++.. +|+ ....+.+||++
T Consensus 46 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 46 MYPVEYGKDSCIIK-EGDVGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp CEEEEECSSCEEEC-TTSCCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred cEEEecCCCCEEEe-CCCcCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 34577788875422 22346789999999999843 455 35678999986
No 226
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=51.59 E-value=35 Score=25.02 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=33.0
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEe
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLI 154 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~ 154 (240)
....+++|..+-.- ...+..+.+|++|++++.. .++ ....+.+||++=.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQ---DDE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEE---TTE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEE---CCE-EEEEecCCCEeCc
Confidence 45677777754221 2335799999999999865 233 3567899998743
No 227
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=48.09 E-value=43 Score=26.92 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=51.6
Q ss_pred eEEEEEEEcCC--cccCCccCCCCCeEEEEeeCEEEEEEEccCC------eEEEEEECCCCEEEeCCCCeEEEEecCCCC
Q 045405 98 VALFRIDLDVG--GINPPHTHPRGTEAGIVTRGTVLVGLVTTNN------TFFSKVLTPGKVFLIPRALVHFQLNVGNEP 169 (240)
Q Consensus 98 ls~~~v~l~pG--g~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g------~~~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (240)
+++.|..-.+. .+...=.||..++.++-+.|...+-++.+++ ++.......|+-+..-+|..|.-.-.-+++
T Consensus 56 isifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~ 135 (175)
T 2bdr_A 56 ISIFRADAQDMPLTVRMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKR 135 (175)
T ss_dssp EEEEEEECCCSSEEECEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSE
T ss_pred EEEEEccccCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCC
Confidence 55555433321 2334566888999999999987655555543 345789999999999999999754333344
Q ss_pred EEEEE
Q 045405 170 ATFIP 174 (240)
Q Consensus 170 a~~i~ 174 (240)
..++.
T Consensus 136 ~dF~v 140 (175)
T 2bdr_A 136 DDFLV 140 (175)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 44443
No 228
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=47.94 E-value=6 Score=31.46 Aligned_cols=128 Identities=14% Similarity=0.121 Sum_probs=77.3
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEEEeCC---C---CeEEEEecCCCCEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVFLIPR---A---LVHFQLNVGNEPATF 172 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~v~P~---G---~~H~~~N~G~~~a~~ 172 (240)
+....+++|..+-..- ..+..+++|++|.+.+...+++|+ .....+.+||++-... + ..+..... +++.+
T Consensus 32 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v 108 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQG-EPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAV--VPSQL 108 (227)
T ss_dssp CEEEECCTTEEEECTT-SBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEES--SCCEE
T ss_pred CEEEEECCCCEEEcCC-CccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEc--CcEEE
Confidence 3456777777643222 235789999999999988777664 2345778999874321 1 12233333 33344
Q ss_pred EEEEe-------CCCCCcee----------------------------ccchh---hcC--------CCCCCHHHHHhhc
Q 045405 173 IPIFN-------TQNPGVSD----------------------------SIGTL---FDT--------TPPVPNEVLTKSF 206 (240)
Q Consensus 173 i~~~~-------s~~Pg~~~----------------------------~~~~l---f~s--------~~~~p~~vla~af 206 (240)
+.+-. ..+|.... ++..+ ... ...++.+-+|...
T Consensus 109 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~t~~~lA~~l 188 (227)
T 3dkw_A 109 FRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHL 188 (227)
T ss_dssp EEEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCSCTHHHHHHT
T ss_pred EEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEEEecCCHHHHHHHh
Confidence 33211 24553210 01111 000 1157889999999
Q ss_pred CCCHHHHHHHHhhcCCCceEEecC
Q 045405 207 RVGDDVINTIRAARAQSSWINILD 230 (240)
Q Consensus 207 ~v~~~~v~~l~~~~~~~~~i~~~~ 230 (240)
|++.+++.++.+.....+.|...+
T Consensus 189 g~sr~tvsR~l~~l~~~g~I~~~~ 212 (227)
T 3dkw_A 189 SIQPETFSRIMHRLGDEGIIHLDG 212 (227)
T ss_dssp TSCHHHHHHHHHHHHHHTSEEESS
T ss_pred CCCHHHHHHHHHHHHHCCcEEecC
Confidence 999999999999888777777644
No 229
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=47.72 E-value=19 Score=25.87 Aligned_cols=45 Identities=22% Similarity=0.237 Sum_probs=31.2
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
....+++|..+-.--. .+..+.+|++|++++...+ ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~------~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGE-PGDRMFFVVEGSVSVATPN------PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESCEEECSSS------CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCC-CcceEEEEEeeEEEEEeCC------cceECCCCEe
Confidence 4677888886533222 3578999999999986532 2467888876
No 230
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=47.58 E-value=48 Score=29.62 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=36.5
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe-EEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT-FFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~-~~~~~l~~GDv~ 152 (240)
+....+++|..+--.-. ....+++|++|++.+.. +.+|+ .....+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCC-CCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEE
Confidence 45678888886533323 45899999999999887 44453 445678999977
No 231
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=47.33 E-value=16 Score=33.77 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=19.6
Q ss_pred EEEECCCCEEEeCCCCeEEEEe
Q 045405 143 SKVLTPGKVFLIPRALVHFQLN 164 (240)
Q Consensus 143 ~~~l~~GDv~v~P~G~~H~~~N 164 (240)
...|++||.+++|+|.+|....
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 4679999999999999999754
No 232
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=40.48 E-value=71 Score=27.69 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=35.6
Q ss_pred cCCCCCeEE-EEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEecC--CCCEEEE
Q 045405 115 THPRGTEAG-IVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVG--NEPATFI 173 (240)
Q Consensus 115 ~Hp~a~Ei~-yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N~G--~~~a~~i 173 (240)
.-.+ .|+. +.+.|++.+.+ +|+ ++.|..-|.+++|+|......... ..++++.
T Consensus 75 fl~~-rE~~iV~l~G~~~V~v---dG~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 75 FLER-RELGVINIGGAGTITV---DGQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp TTTT-EEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred ccCC-cEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 3344 4554 56788998887 466 458899999999999865544433 2355553
No 233
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=39.90 E-value=36 Score=28.21 Aligned_cols=52 Identities=25% Similarity=0.298 Sum_probs=36.4
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEc-cCCe-EEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVT-TNNT-FFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~-~~g~-~~~~~l~~GDv~ 152 (240)
+....+.+|..+-.- -..+..+++|++|++.+...+ .+|+ .....+.+||++
T Consensus 180 ~~~~~~~~g~~I~~~-G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQ-GARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECT-TCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeC-CCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 356677888754222 224578999999999998876 3453 445688999987
No 234
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=38.17 E-value=74 Score=25.99 Aligned_cols=48 Identities=19% Similarity=0.333 Sum_probs=34.7
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+++|..+--. ...++.+++|++|++.+.. +|+. ...+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~---~g~~-~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQ-GDEGDNFYVIDQGEMDVYV---NNEW-ATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEECCEEEEE---TTEE-EEEECTTCEE
T ss_pred ccEEEECCCCEEEeC-CCCCceEEEEeeeEEEEEE---CCeE-EEEcCCCCcc
Confidence 356778888765322 2345789999999999876 3543 5788999987
No 235
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=37.65 E-value=45 Score=26.10 Aligned_cols=49 Identities=16% Similarity=0.026 Sum_probs=34.3
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFL 153 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v 153 (240)
+....+.||..+-.- -..+..+.+|++|++.+.. +|. ....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~v~~---~~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQ-GDALQAIYFVCSGSMEVLK---DNT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEECCEEEES---SSC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEEC-CCcccEEEEEEecEEEEEE---CCe-EEEEecCCCCcC
Confidence 456678888864322 2235899999999998874 343 356899999874
No 236
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=37.24 E-value=62 Score=23.47 Aligned_cols=49 Identities=12% Similarity=0.199 Sum_probs=27.7
Q ss_pred CCcccCCccCCCCC-eEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCC
Q 045405 107 VGGINPPHTHPRGT-EAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRAL 158 (240)
Q Consensus 107 pGg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~ 158 (240)
.||+..|-....-. +=..|-=|.++. +.+|+.....++.||.+++++|+
T Consensus 22 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~k~y 71 (97)
T 1pcq_O 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI---LENGEVKPLDVKVGDIVIFNDGY 71 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSEEC---TTSSSCEECSCCTTCEEEECCCS
T ss_pred cceEEeCcccccCCcccEEEEEcCcee---cCCCCEEecccCCCCEEEECCcc
Confidence 35665554332222 222333355542 34566556679999999999943
No 237
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=35.74 E-value=33 Score=32.29 Aligned_cols=29 Identities=24% Similarity=0.272 Sum_probs=24.0
Q ss_pred EEEECCCCEEEeCCCCeEEEEecCCCCEE
Q 045405 143 SKVLTPGKVFLIPRALVHFQLNVGNEPAT 171 (240)
Q Consensus 143 ~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (240)
..+=++||.+++++|..||..|.|-..-+
T Consensus 314 r~iQkPGdfVit~PgtyH~Vqs~Gf~~ni 342 (510)
T 4ask_A 314 RFVQRPGDLVWINAGTVHWVQATGWCNNI 342 (510)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSEEEE
T ss_pred EEEECCCCEEEECCCceEEEEecCeeeee
Confidence 45669999999999999999999854333
No 238
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=34.72 E-value=50 Score=31.22 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=25.5
Q ss_pred EEEEECCCCEEEeCCCCeEEEEecCCCCEEEE
Q 045405 142 FSKVLTPGKVFLIPRALVHFQLNVGNEPATFI 173 (240)
Q Consensus 142 ~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~i 173 (240)
+..+=++||.+++++|..||..|.|-.-.+.+
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 34566999999999999999999996444433
No 239
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=34.40 E-value=1.4e+02 Score=26.78 Aligned_cols=74 Identities=15% Similarity=0.083 Sum_probs=51.7
Q ss_pred EEEECC---------CCEEEeCCCCeEEEEecCCCCEEEEEEEeCCCC-------------Cce--------------ec
Q 045405 143 SKVLTP---------GKVFLIPRALVHFQLNVGNEPATFIPIFNTQNP-------------GVS--------------DS 186 (240)
Q Consensus 143 ~~~l~~---------GDv~v~P~G~~H~~~N~G~~~a~~i~~~~s~~P-------------g~~--------------~~ 186 (240)
+.++++ ||..+.|...+|...=.++.|+.+++...-.+- .+. .+
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 567777 999999999999998889999998875432221 000 01
Q ss_pred cchhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 045405 187 IGTLFDTTPPVPNEVLTKSFRVGDDVINTIRA 218 (240)
Q Consensus 187 ~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~ 218 (240)
....-.. +++.+-|++..|++.+.+..+..
T Consensus 236 R~ar~Re--glTQ~~LAe~TGIPq~hISeMen 265 (443)
T 3g7d_A 236 DLFLARR--AHTRTSAAEAAGVPPADLEAALR 265 (443)
T ss_dssp HHHHHHT--TCCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHhc--CCCHHHHHHHhCCCHHHHHHHhc
Confidence 1112223 78899999999998888766543
No 240
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=34.12 E-value=81 Score=27.34 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=44.2
Q ss_pred ceEEEEEEEcCCccc-CCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEE-------EEecCCC
Q 045405 97 GVALFRIDLDVGGIN-PPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHF-------QLNVGNE 168 (240)
Q Consensus 97 gls~~~v~l~pGg~~-~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~-------~~N~G~~ 168 (240)
|.....+.+.||... ..-.|+. .|=+|+++|.. ..|+.++-|.|+.|. -.- .+.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHdy-~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~-Se~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQPY-NEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHI-TDD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEECS-CEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEE-ESS
T ss_pred CCeEEEEEECCCCCCCCceeecc-ceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcC-cCC
Confidence 556667788888643 3344754 67789999976 348899999999998 333 345
Q ss_pred CEEEEEEEeCC
Q 045405 169 PATFIPIFNTQ 179 (240)
Q Consensus 169 ~a~~i~~~~s~ 179 (240)
.+.++.-.+.+
T Consensus 278 G~l~fvR~Dgd 288 (303)
T 2qdr_A 278 GGLFFVRVDRD 288 (303)
T ss_dssp CEEEEEEESSC
T ss_pred ceEEEEEeCcc
Confidence 66666555443
No 241
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=32.23 E-value=47 Score=26.24 Aligned_cols=49 Identities=16% Similarity=0.057 Sum_probs=33.5
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
+....+.+|..+--- -..+..+++|.+|++++...+. + ....+.+||++
T Consensus 148 ~~~~~~~~g~~i~~~-g~~~~~~y~I~~G~v~v~~~~~-~--~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIRE-GDQGENFYLIEYGAVDVSKKGQ-G--VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEECEEEEEETTT-E--EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeC-CCcCCEEEEEEecEEEEEEcCC-c--eEEEcCCCCcc
Confidence 355677888754322 2245789999999999876432 2 35688999976
No 242
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=31.97 E-value=53 Score=25.89 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=32.7
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEE
Q 045405 101 FRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVF 152 (240)
Q Consensus 101 ~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~ 152 (240)
....+++|..+--- -..++.+.+|++|++++.. +++. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~v~~---~~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQ-GDQGDYFYVVEKGTVDFYV---NDNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECT-TCCCCEEEEEEECCEEEES---TTSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEec-CCCCCEEEEEEeeEEEEEE---CCEE-EEecCCCCee
Confidence 46677777754222 2245899999999999874 3432 3688999988
No 243
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=30.66 E-value=9.8 Score=27.53 Aligned_cols=49 Identities=12% Similarity=-0.027 Sum_probs=29.5
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEE---EEEECCCCEE
Q 045405 102 RIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFF---SKVLTPGKVF 152 (240)
Q Consensus 102 ~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~---~~~l~~GDv~ 152 (240)
...+++|..+-. -...+..+.+|++|++++. .+++|+.. ...+.+||++
T Consensus 31 ~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 31 PCLFTEKSYLVR-EGDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCCBCTTEEEEC-TTSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred EEEeCCCCEEEe-CCCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 345555554321 2234578999999999954 44555421 1277888875
No 244
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=29.57 E-value=51 Score=28.93 Aligned_cols=50 Identities=22% Similarity=0.199 Sum_probs=33.6
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCe--EEEEEECCCCEE
Q 045405 102 RIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNT--FFSKVLTPGKVF 152 (240)
Q Consensus 102 ~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~--~~~~~l~~GDv~ 152 (240)
...+.+|..+--- -..+..+++|++|++++...+.+|+ .....+.+||+|
T Consensus 273 ~~~~~~ge~I~~e-Gd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 273 PVQFEDGEKIVVQ-GEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCCBCSSCBSSCT-TSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred hccCCCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 3456666643222 2245789999999999987655442 235689999987
No 245
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=29.07 E-value=99 Score=25.23 Aligned_cols=34 Identities=12% Similarity=0.035 Sum_probs=26.3
Q ss_pred CeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCC
Q 045405 120 TEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRA 157 (240)
Q Consensus 120 ~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G 157 (240)
.-++|+++|++.+... +++ ...|.+||.+++-..
T Consensus 141 ~~~v~~l~G~~~v~~~--~~~--~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 141 TLLLFAQQDGVAISLQ--GQP--RGQLAAHDCLCAEGL 174 (200)
T ss_dssp EEEEEESSSCEEEEET--TEE--EEEECTTCEEEEESC
T ss_pred EEEEEEccCcEEEEcC--CCc--eeecCCCCEEEEeCC
Confidence 6789999999988651 123 578999999998554
No 246
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=27.73 E-value=1.1e+02 Score=25.13 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=34.6
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFL 153 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v 153 (240)
+....+++|..+--.-. .+..+++|++|++++.. +|+. ...+.+||++=
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~---~g~~-~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---EGVK-LCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTC-BCCCEEEEEESCEEEEE---TTEE-EEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCC-cCceEEEEEEEEEEEEE---CCEE-EEEeCCCCeee
Confidence 44577888876533323 35789999999999843 3543 56899999873
No 247
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=26.96 E-value=64 Score=30.03 Aligned_cols=51 Identities=22% Similarity=0.130 Sum_probs=37.1
Q ss_pred EEEEcCCcccCCccCCC-CCeEEEEeeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEE
Q 045405 102 RIDLDVGGINPPHTHPR-GTEAGIVTRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHF 161 (240)
Q Consensus 102 ~v~l~pGg~~~pH~Hp~-a~Ei~yVl~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~ 161 (240)
|....|+.+.+|-+|.+ ..|+.+.+.|.-.. | ...+.+|.+-+-|.+.+|.
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a-------k--~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA-------K--QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC-----------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhccccccc-------c--ccCcCCCceeccCCCcCCC
Confidence 67888999999988833 45899999998532 2 2357999999999999996
No 248
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=25.98 E-value=40 Score=25.95 Aligned_cols=29 Identities=7% Similarity=0.231 Sum_probs=17.2
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
++.++.+.+ .+++|++.-- ....|.|.|.
T Consensus 175 g~sr~tvsR-------~l~~l~~~g~I~~~~~~i~i~d~ 206 (207)
T 2oz6_A 175 GCSREMVGR-------VLKSLEEQGLVHVKGKTMVVFGT 206 (207)
T ss_dssp TSCHHHHHH-------HHHHHHHTTSEEEETTEEEEETC
T ss_pred CCCHHHHHH-------HHHHHHHCCCEEecCCEEEEEeC
Confidence 388888886 4455655332 2345666664
No 249
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=24.83 E-value=89 Score=17.67 Aligned_cols=26 Identities=8% Similarity=0.063 Sum_probs=23.0
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA 221 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~ 221 (240)
+++..-+|+.++++..+|.+..+.+.
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDPV 46 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCST
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhHH
Confidence 78899999999999999999877654
No 250
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=24.60 E-value=45 Score=25.72 Aligned_cols=28 Identities=7% Similarity=0.207 Sum_probs=16.5
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILD 230 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~ 230 (240)
++.++.+.+ .+++|++.-- ....|.|.|
T Consensus 178 g~sr~tvsR-------~l~~L~~~g~I~~~~~~i~i~d 208 (210)
T 3ryp_A 178 GCSRETVGR-------ILKMLEDQNLISAHGKTIVVYG 208 (210)
T ss_dssp TCCHHHHHH-------HHHHHHHTTSEEEETTEEEEEC
T ss_pred CCcHHHHHH-------HHHHHHHCCcEEeCCCEEEEEe
Confidence 388888886 4456655432 334566555
No 251
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=24.35 E-value=50 Score=26.01 Aligned_cols=29 Identities=17% Similarity=0.254 Sum_probs=16.0
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
++.++.+.+ .+++|++..- ....|.|.|.
T Consensus 191 g~sr~tvsR-------~l~~l~~~g~I~~~~~~i~i~d~ 222 (232)
T 2gau_A 191 NMTVSNAIR-------TLSTFVSERMLALDGKRIKIIDC 222 (232)
T ss_dssp TSCHHHHHH-------HHHHHHHTTSEEEETTEEEESCH
T ss_pred CCCHHHHHH-------HHHHHHHCCCEeeCCCEEEEeCH
Confidence 478888876 3455554322 2345666553
No 252
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=23.81 E-value=51 Score=25.95 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=15.6
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
++.++.+.+ .+++|++.-- ....|.|.|.
T Consensus 186 g~sr~tvsR-------~l~~L~~~g~I~~~~~~i~i~d~ 217 (231)
T 3e97_A 186 SSSRETVSR-------VLKRLEAHNILEVSPRSVTLLDL 217 (231)
T ss_dssp TCCHHHHHH-------HHHHHHHTTSEEECSSCEEESCH
T ss_pred CCcHHHHHH-------HHHHHHHCCcEEecCCEEEEeCH
Confidence 377777775 3445544321 3445666553
No 253
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=23.41 E-value=50 Score=26.50 Aligned_cols=31 Identities=10% Similarity=0.206 Sum_probs=18.3
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCCee
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDGRS 233 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~~~ 233 (240)
++.++.+.+ .+++|++.-- ....|.|.|...
T Consensus 204 G~sr~tvsR-------~l~~L~~~GlI~~~~~~i~I~d~~~ 237 (243)
T 3la7_A 204 GSTRVTVTR-------LLGDLREKKMISIHKKKITVHKPVT 237 (243)
T ss_dssp TCCHHHHHH-------HHHHHHHTTSEEEETTEEEECC---
T ss_pred CCcHHHHHH-------HHHHHHHCCCEEEcCCEEEECCHHH
Confidence 488888886 4556655432 445777777543
No 254
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=23.17 E-value=49 Score=25.91 Aligned_cols=29 Identities=10% Similarity=0.200 Sum_probs=16.3
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
++.++.+.+ .+++|++.-- ....|.|.|.
T Consensus 198 g~sr~tvsR-------~l~~L~~~g~I~~~~~~i~i~d~ 229 (230)
T 3iwz_A 198 GCSREMAGR-------VLKKLQADGLLHARGKTVVLYGT 229 (230)
T ss_dssp TCCHHHHHH-------HHHHHHHTTSEEEETTEEEEEC-
T ss_pred CCcHHHHHH-------HHHHHHHCCCEEECCCEEEEeeC
Confidence 378888886 4456655432 3345665553
No 255
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=23.03 E-value=43 Score=26.75 Aligned_cols=29 Identities=7% Similarity=0.323 Sum_probs=16.2
Q ss_pred CCCH-HHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPN-EVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~-~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
++++ +.+.+ .+++|++.-- ....|.|.|.
T Consensus 180 G~sr~etvsR-------~l~~l~~~glI~~~~~~i~I~d~ 212 (238)
T 2bgc_A 180 GIAHSSAVSR-------IISKLKQEKVIVYKNSCFYVQNL 212 (238)
T ss_dssp TCCCHHHHHH-------HHHHHHHTTSEEEETTEEEESCH
T ss_pred CCChHHHHHH-------HHHHHHHCCCEEecCCEEEEeCH
Confidence 3777 68776 4555554332 2345666663
No 256
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.95 E-value=51 Score=23.39 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=26.5
Q ss_pred ccchhhcCCCCCCHHHHHhhcCCCHHHHHHHHhhc
Q 045405 186 SIGTLFDTTPPVPNEVLTKSFRVGDDVINTIRAAR 220 (240)
Q Consensus 186 ~~~~lf~s~~~~p~~vla~af~v~~~~v~~l~~~~ 220 (240)
+..++|- .+++|+|..-|+++.-+++||.+-.
T Consensus 45 IDG~lL~---~L~ee~L~edf~ls~Lq~kKi~~fI 76 (84)
T 2dkz_A 45 IDGNLLV---QLTEEILSEDFKLSKLQVKKIMQFI 76 (84)
T ss_dssp CCHHHHH---HCCHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cchHHHH---hCCHHHHHhhcCCCHHHHHHHHHHH
Confidence 3456777 6999999999999999999997653
No 257
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=22.66 E-value=53 Score=25.77 Aligned_cols=29 Identities=14% Similarity=0.143 Sum_probs=16.8
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
++.++.+.+. +++|++..- ....|.|.|.
T Consensus 188 g~sr~tvsR~-------l~~l~~~g~I~~~~~~i~i~d~ 219 (227)
T 3d0s_A 188 GASRETVNKA-------LADFAHRGWIRLEGKSVLISDS 219 (227)
T ss_dssp TSCHHHHHHH-------HHHHHHTTSEEEETTEEEESCH
T ss_pred CCcHHHHHHH-------HHHHHHCCCEEecCCEEEEcCH
Confidence 4888888863 455554332 3346666653
No 258
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=22.64 E-value=52 Score=25.40 Aligned_cols=29 Identities=28% Similarity=0.219 Sum_probs=16.5
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
++.++.+.+ .+++|++.-- ....|.|.|.
T Consensus 157 g~sr~tvsR-------~l~~L~~~g~I~~~~~~i~i~d~ 188 (202)
T 2zcw_A 157 GSVRETVTK-------VIGELAREGYIRSGYGKIQLLDL 188 (202)
T ss_dssp TCCHHHHHH-------HHHHHHHTTSEEEETTEEEESCH
T ss_pred CCCHHHHHH-------HHHHHHHCCCEEeCCCEEEEeCH
Confidence 488888886 3455554322 2345666553
No 259
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=22.62 E-value=51 Score=25.54 Aligned_cols=8 Identities=13% Similarity=0.430 Sum_probs=5.2
Q ss_pred CCHHHHHh
Q 045405 197 VPNEVLTK 204 (240)
Q Consensus 197 ~p~~vla~ 204 (240)
+.++.+.+
T Consensus 175 ~sr~tvsR 182 (216)
T 4ev0_A 175 TSRETVSR 182 (216)
T ss_dssp SCHHHHHH
T ss_pred CCHHHHHH
Confidence 66666665
No 260
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=22.42 E-value=72 Score=28.40 Aligned_cols=52 Identities=15% Similarity=0.022 Sum_probs=33.5
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEeeCEEEEEEEccC------Ce-EEEEEECCCCEE
Q 045405 100 LFRIDLDVGGINPPHTHPRGTEAGIVTRGTVLVGLVTTN------NT-FFSKVLTPGKVF 152 (240)
Q Consensus 100 ~~~v~l~pGg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~------g~-~~~~~l~~GDv~ 152 (240)
+....+.+|..+-.- -..+..+++|++|++++...+.+ |+ .....+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~e-Gd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQ-GDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 456677888754222 23458999999999999876553 32 235678999987
No 261
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=22.09 E-value=45 Score=25.65 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=16.7
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDG 231 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~ 231 (240)
+++++.+.+. +++|++.-- ....|.|.|.
T Consensus 150 g~sr~tvsR~-------l~~L~~~g~I~~~~~~i~i~d~ 181 (195)
T 3b02_A 150 ASIRESVSKV-------LADLRREGLIATAYRRVYLLDL 181 (195)
T ss_dssp TSCHHHHHHH-------HHHHHHHTSEEEETTEEEECCH
T ss_pred CCCHHHHHHH-------HHHHHHCCCEEecCCEEEEeCH
Confidence 4888888864 455544322 2345666653
No 262
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=21.67 E-value=61 Score=26.01 Aligned_cols=28 Identities=7% Similarity=0.227 Sum_probs=16.0
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecC
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILD 230 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~ 230 (240)
++.++.+.+. +++|++..- ....|.|.|
T Consensus 188 G~sr~tvsR~-------l~~L~~~g~I~~~~~~i~i~d 218 (250)
T 3e6c_C 188 GVHHVTVSRV-------LASLKRENILDKKKNKIIVYN 218 (250)
T ss_dssp TCCHHHHHHH-------HHHHHHTTSEEECSSEEEESC
T ss_pred CCcHHHHHHH-------HHHHHHCCCeEeCCCEEEEec
Confidence 4888888874 455554322 334555554
No 263
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=21.32 E-value=47 Score=26.10 Aligned_cols=10 Identities=0% Similarity=0.043 Sum_probs=7.5
Q ss_pred CCCHHHHHhh
Q 045405 196 PVPNEVLTKS 205 (240)
Q Consensus 196 ~~p~~vla~a 205 (240)
++.++.+.+.
T Consensus 174 G~sr~tvsR~ 183 (222)
T 1ft9_A 174 GSSRQTTSTA 183 (222)
T ss_dssp CSCHHHHHHH
T ss_pred CCcHHHHHHH
Confidence 4888888864
No 264
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=20.75 E-value=1.4e+02 Score=21.64 Aligned_cols=55 Identities=22% Similarity=0.161 Sum_probs=31.4
Q ss_pred CCcccCCccCCCCCeEEEE-eeCEEEEEEEccCCeEEEEEECCCCEEEeCCCCeEEEEe
Q 045405 107 VGGINPPHTHPRGTEAGIV-TRGTVLVGLVTTNNTFFSKVLTPGKVFLIPRALVHFQLN 164 (240)
Q Consensus 107 pGg~~~pH~Hp~a~Ei~yV-l~G~~~v~~v~~~g~~~~~~l~~GDv~v~P~G~~H~~~N 164 (240)
.||+..|-....-.....| -=|.+.. +.+|+.....++.||.+++++....-+.-
T Consensus 27 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~ 82 (100)
T 1we3_O 27 KGGIVLPDTAKEKPQKGKVIAVGTGRV---LENGQRVPLEVKEGDIVVFAKYGGTEIEI 82 (100)
T ss_dssp TTCCCCCTTTSCCCSEEEESCCCCCEE---CTTSCEECCSCCTTCEEEECTTCSEEEEC
T ss_pred cceEEeCcccccCCcCCEEEEECCCcC---CCCCCEEeeecCCCCEEEECCCCCeEEEE
Confidence 3566555443222333333 3355532 34566555679999999999976555543
No 265
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=20.71 E-value=47 Score=25.94 Aligned_cols=30 Identities=17% Similarity=0.360 Sum_probs=18.8
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhhcC---CCceEEecCCe
Q 045405 196 PVPNEVLTKSFRVGDDVINTIRAARA---QSSWINILDGR 232 (240)
Q Consensus 196 ~~p~~vla~af~v~~~~v~~l~~~~~---~~~~i~~~~~~ 232 (240)
++.++.+.+ .+++|++..- ....|.|.|..
T Consensus 189 g~sr~tvsR-------~l~~l~~~g~I~~~~~~i~i~d~~ 221 (227)
T 3dkw_A 189 SIQPETFSR-------IMHRLGDEGIIHLDGREISILDRE 221 (227)
T ss_dssp TSCHHHHHH-------HHHHHHHHTSEEESSSCEEESCST
T ss_pred CCCHHHHHH-------HHHHHHHCCcEEecCCEEEEeCHH
Confidence 488888886 4456655432 44567777654
Done!