BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045407
MGKRDKKQQRQQRRDSRRGGRFSNYQEEEEGGYEADYSHHSSLPSSSDHEEAEEETGPEE
DFDKADDDRDKNDTNPSTDMPSKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQED
FCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL
EAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIIC
AFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVW
EQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWLR
EMPDAREMRNTEGLGGFSRCKV

High Scoring Gene Products

Symbol, full name Information P value
AT2G27590 protein from Arabidopsis thaliana 7.9e-117

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045407
        (382 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2038668 - symbol:AT2G27590 "AT2G27590" species...  1151  7.9e-117  1


>TAIR|locus:2038668 [details] [associations]
            symbol:AT2G27590 "AT2G27590" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 EMBL:AC006232 GO:GO:0008168
            EMBL:AC005824 EMBL:AY072120 EMBL:AY096667 IPI:IPI00523843
            PIR:E84674 RefSeq:NP_565655.1 UniGene:At.38747
            ProteinModelPortal:Q8VYF0 PRIDE:Q8VYF0 DNASU:817305
            EnsemblPlants:AT2G27590.1 GeneID:817305 KEGG:ath:AT2G27590
            TAIR:At2g27590 InParanoid:Q8VYF0 OMA:TRISLHF PhylomeDB:Q8VYF0
            ProtClustDB:CLSN2688484 ArrayExpress:Q8VYF0 Genevestigator:Q8VYF0
            Uniprot:Q8VYF0
        Length = 372

 Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
 Identities = 210/301 (69%), Positives = 254/301 (84%)

Query:    75 NPSTDMPSKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRS 134
             N S+D+PSKFLLYQQSVQSPKGDISYLQKFFL+YVGGRQP H QEDFCGTALLS EWL++
Sbjct:    53 NESSDLPSKFLLYQQSVQSPKGDISYLQKFFLMYVGGRQPFHFQEDFCGTALLSAEWLKT 112

Query:   135 DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194
             D+RRTA+GLD DLEALEWCM+NN++K+G+D YSR+SLFHGNVL PLEAK V+ +  +L++
Sbjct:   113 DTRRTAIGLDFDLEALEWCMDNNISKLGSDVYSRMSLFHGNVLTPLEAKQVKSKSHELIQ 172

Query:   195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRAD 254
             NISL++ D+  + +  + +V ++      D       SLP RDI+CAFN+SCCCLHKR++
Sbjct:   173 NISLDDGDDNEDLA--DPSVVESLEKDGPD-------SLPKRDIVCAFNFSCCCLHKRSE 223

Query:   255 LVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRI 314
             LV YFK+   ALSKKGGIFVMDLYGG S+E +L+LQR+F NFTY WEQAEFDI+ RKTRI
Sbjct:   224 LVSYFKNARDALSKKGGIFVMDLYGGASAEGQLKLQRKFPNFTYTWEQAEFDILSRKTRI 283

Query:   315 SLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWLREMPDAREMRNTEGL 374
             SLH+HLQK+ +K+RHAFSY+WRLWSLPEIKDC+EEAGF SVHFWLREMPDA EMR T+G 
Sbjct:   284 SLHYHLQKQNRKIRHAFSYSWRLWSLPEIKDCMEEAGFSSVHFWLREMPDASEMRRTDGF 343

Query:   375 G 375
             G
Sbjct:   344 G 344


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      382       326   0.00087  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  252 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.03u 0.09s 26.12t   Elapsed:  00:00:04
  Total cpu time:  26.03u 0.09s 26.12t   Elapsed:  00:00:04
  Start:  Mon May 20 21:09:37 2013   End:  Mon May 20 21:09:41 2013

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